Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000003

Orthogroup ID

OG0006253

Physical Location & Seq

Genomic Coordinates Reverse (-)

8768983 .. 8771928

Gene Structure 2946 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug03G0109100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1563 bp

ATGGCTTCCATCAACTTCAACCCTTTTGAGGGCTGGTTCCGAAAACCCCCAAACCCACTCCCACCCATCAACCTCCTCTCCCTCGCCGACTCATTCTTCCCCAAAACCCCAACCCCCACCCCACAATTCGCCTCCCTCAGCCTCTCAAACCCCTTCAAATCCCCCCAAAAACCCGACCCGAAATCCGAACCCGAGCCGGAGAAGCCCGGGCAATACACCCAGATGCTGGAGCAGTTCTTCTGGGAATGCGAGAACCTACCCGATTACAGACACACTCCGGAAGTGGACAAGATTCTAGACTCCGACCCGATTCTGGAGAAGAAAGAAAACCCGACTGAGGAGGAGATTAGAGAGAACGAGAAGTTCTGGGAGGAGTTTCGGGCCAGCCCGGTAATCAAGTTCTTGACCCGGGCCGAGCAGATTGCGGATAAGATCAATGAAATGGAGCTGAAGGAGAACGAGAGGCCGTACAGGAGTGAGGATAAGAAGCTGTGGCAGGCTGTGCCGAATGTTATTGGGCCGGACGGGAGGCCCATGCCGAGGAAGGCGATTAAGACGAAGAAGGAGTCTGATGACAAGTTCTGGGATTTTGCAAGGCAGTTCTTTTTCGGGCTTTGGGGTTTCCAGCAGAGGCCGTACCCGCCGGGTCGGCCCATTGATGTGGCTCAGGCCATTGGGTACAAGAGGCTGGAGAGGAGATACTATGATTTTGCCATGAGGAGTGGTGGGTGGTTCTATAAGGACCGGTTGGGTCGAACAAGAGGTCCGCTGGAGCTTATAACACTCAAAACAGCATGGGGTGCTGGGATTATTGATAAACACACATTCATTTGGGGCGAGGATATGGATGAATGGGCTCCGATTCACATGGTTTATGGGATGGAACGTGCTATCGCCACCTGGGAAGTTAGACTCGGTGCTGCTGCAACTGCTTTTATTCACAAACTACAAAAAGGAATCCCTCCTTGGGTTCCACTAAAGGGATTTGAGGATAAAACCTATAAGCAATTACAAGAAGAGGCTGTAGAAAGCAAGAGACGTGACTTAGCAGTACTTGAAGCAAATGATGGTGTTTGGCCGGGTGTCAGAACTCCTAGTCATGCGTTATTTCTTTGGGCTAGTGGCTCTGAGCTAACAACAATTTTGGAACAGGATCACATGCCAAACAAATACATTCCTAAAGATCTTAGGCTTGAGCTCTCTAGAATTATCCCTGGTTTAAGGCCATGGGAGGTTTTGAGTGTGGAACAAGCAATGGATCAGATAACTTACGAGGGGGAGTGGTATCGCGAACCTCTTGGTACATACACGACTGGCCCTCCATACATTCGAGAATGGAATATGGATGTCCAGAGACTGTATAGGATCTATACGAACCTAAGCACCCGAGTCTACCAGAAATTGGAGAGATCAATTCCTGGTTTCGATAAAGTAATGGAGAAGGTCCAAGCTGATGCTGCTGCAAGAGATCAGAGGCGGAAGGCTAGAAGAGCTGCAGAGAAGCAAGCTGAGCTGGAAAAATCCTTTGGTGGAATTCGAACTGGTCCTGTAAATGACCCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0003919 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005886 GO:0006139 GO:0006725 GO:0006732 GO:0006747 GO:0006753 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009108 GO:0009117 GO:0009165 GO:0009987 GO:0016020 GO:0016740 GO:0016772 GO:0016779 GO:0018130 GO:0019438 GO:0019637 GO:0034641 GO:0034654 GO:0042726 GO:0042727 GO:0044237 GO:0044238 GO:0044249 GO:0044271 GO:0044281 GO:0044424 GO:0044444 GO:0044464 GO:0046443 GO:0046483 GO:0051186 GO:0051188 GO:0055086 GO:0055114 GO:0070566 GO:0071704 GO:0071944 GO:0072387 GO:0072388 GO:0090407 GO:1901293 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00740 ko01100 ko01110 map00740 map01100 map01110

Pfam Domains

Protein Families

MoCF_biosynth PAPS_reduct

Protein Analysis

520

Amino Acids

60.6

Weight (kDa)

6.68

Isoelectric Point (pI)

38.58

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GYF_2	PF14237	244 - 291	3.9e-10	GYF domain 2

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006253)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G03430
fragaria_vesca	FvH4_6g16530 FvH4_6g16530 FvH4_6g16530 FvH4_6g16530 FvH4_6g16530 FvH4_6g16530 FvH4_6g16530 FvH4_6g16530 FvH4_6g16530 FvH4_6g16530
malus_domestica	MD04G1091700.v1.1 MD12G1109700.v1.1
prunus_persica	Prupe.7G128300_v2.0.a1
pyrus_communis	pycom04g08640
rosa_chinensis	RchiOBHm_Chr3g0470441
rosa_laevigata	RLG00000024267
rosa_multiflora	Rmu_sc0002383.1_g000006
rosa_roxburghii	Rroxscaffold_6G00410810
rosa_rugosa	Rorug03G0108900 Rorug03G0109000 Rorug03G0109100
rosa_samantha	Rh3AG159400 Rh3BG183800 Rh3CG174400 Rh3DG190900
rosa_wichuraiana	Rw3G015090

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	779
AccB7I	CCANNNNNTGG	2 cut(s)	226, 1402
AccI	GTMKAC	1 cut(s)	1392
AccII	CGCG	1 cut(s)	1290
AccIII	TCCGGA	1 cut(s)	277
AciI	CCGC	4 cut(s)	425, 641, 767, 1477
AclWI	GGATC	3 cut(s)	1161, 1266, 1373
AcoI	YGGCCR	1 cut(s)	1076
AcsI	RAATTY	1 cut(s)	1533
AcuI	CTGAAG	1 cut(s)	470
AfaI	GTAC	5 cut(s)	470, 638, 680, 1053, 1303
AfiI	CCNNNNNNNGG	9 cut(s)	28, 29, 226, 313, 337, 540, 967, 980, 1402
AgeI	ACCGGT	1 cut(s)	744
AgsI	TTSAA	3 cut(s)	19, 157, 1058
AjiI	CACGTC	1 cut(s)	1040
AjnI	CCWGG	3 cut(s)	899, 1213, 1417
AjuI	GAANNNNNNNTTGG	4 cut(s)	949, 981, 1509, 1541
AloI	GAACNNNNNNTCC	2 cut(s)	748, 780
AluBI	AGCT	9 cut(s)	448, 490, 775, 1132, 1198, 1451, 1493, 1508, 1513
AluI	AGCT	9 cut(s)	448, 490, 775, 1132, 1198, 1451, 1493, 1508, 1513
Alw21I	GWGCWC	1 cut(s)	1200
Alw26I	GTCTC	2 cut(s)	1030, 1348
AlwI	GGATC	3 cut(s)	1161, 1266, 1373
AlwNI	CAGNNNCTG	2 cut(s)	226, 1357
Ama87I	CYCGRG	4 cut(s)	191, 206, 408, 1386
Aor13HI	TCCGGA	1 cut(s)	277
ApeKI	GCWGC	5 cut(s)	920, 923, 1457, 1460, 1493
ApoI	RAATTY	1 cut(s)	1533
ArsI	GACNNNNNNTTYG	4 cut(s)	551, 583, 748, 780
AsiGI	ACCGGT	1 cut(s)	744
AsuC2I	CCSGG	7 cut(s)	207, 208, 389, 409, 410, 645, 1080
AsuII	TTCGAA	1 cut(s)	1537
AvaI	CYCGRG	4 cut(s)	191, 206, 408, 1386
AvaII	GGWCC	4 cut(s)	742, 764, 1444, 1544
BanII	GRGCYC	2 cut(s)	859, 1200
Bbv12I	GWGCWC	1 cut(s)	1200
BbvCI	CCTCAGC	1 cut(s)	137
BbvI	GCAGC	5 cut(s)	907, 910, 1444, 1447, 1480
BccI	CCATC	4 cut(s)	17, 74, 874, 1061
BceAI	ACGGC	2 cut(s)	451, 619
BcgI	CGANNNNNNTGC	2 cut(s)	404, 438
BciT130I	CCWGG	3 cut(s)	901, 1215, 1419
BcnI	CCSGG	7 cut(s)	207, 208, 389, 409, 410, 645, 1080
BcoDI	GTCTC	2 cut(s)	1030, 1348
BfaI	CTAG	5 cut(s)	296, 1095, 1119, 1203, 1485
BfmI	CTRYAG	2 cut(s)	1023, 1494
BglI	GCCNNNNNGGC	1 cut(s)	649
BglII	AGATCT	1 cut(s)	1183
BisI	GCNGC	5 cut(s)	921, 924, 1458, 1461, 1494
BlpI	GCTNAGC	1 cut(s)	1509
BlsI	GCNGC	5 cut(s)	922, 925, 1459, 1462, 1495
BmcAI	AGTACT	1 cut(s)	1053
Bme18I	GGWCC	4 cut(s)	742, 764, 1444, 1544
BmeT110I	CYCGRG	4 cut(s)	191, 206, 408, 1386
BmgBI	CACGTC	1 cut(s)	1040
BmiI	GGNNCC	3 cut(s)	38, 858, 972
BmsI	GCATC	2 cut(s)	213, 1444
BpmI	CTGGAG	4 cut(s)	248, 335, 710, 791
Bpu10I	CCTNAGC	3 cut(s)	137, 666, 1379
Bpu1102I	GCTNAGC	1 cut(s)	1509
Bpu14I	TTCGAA	1 cut(s)	1537
BpuEI	CTTGAG	1 cut(s)	1214
BpuMI	CCSGG	7 cut(s)	207, 208, 389, 409, 410, 645, 1080
BsaJI	CCNNGG	7 cut(s)	206, 408, 539, 900, 965, 1213, 1226
BsaWI	WCCGGW	2 cut(s)	277, 744
BsaXI	ACNNNNNCTCC	4 cut(s)	62, 92, 1303, 1333
Bsc4I	CCNNNNNNNGG	9 cut(s)	28, 29, 226, 313, 337, 540, 967, 980, 1402
Bse118I	RCCGGY	1 cut(s)	744
Bse1I	ACTGG	2 cut(s)	1318, 1546
Bse3DI	GCAATG	1 cut(s)	1260
BseAI	TCCGGA	1 cut(s)	277
BseBI	CCWGG	3 cut(s)	901, 1215, 1419
BseDI	CCNNGG	7 cut(s)	206, 408, 539, 900, 965, 1213, 1226
BseGI	GGATG	3 cut(s)	853, 885, 1351
BseLI	CCNNNNNNNGG	9 cut(s)	28, 29, 226, 313, 337, 540, 967, 980, 1402
BseMI	GCAATG	1 cut(s)	1260
BseMII	CTCAG	5 cut(s)	151, 327, 680, 1119, 1500
BseNI	ACTGG	2 cut(s)	1318, 1546
BseRI	GAGGAG	6 cut(s)	65, 353, 356, 386, 709, 733
BseXI	GCAGC	5 cut(s)	907, 910, 1444, 1447, 1480
BseYI	CCCAGC	1 cut(s)	803
Bsh1236I	CGCG	1 cut(s)	1290
BshTI	ACCGGT	1 cut(s)	744
BsiHKAI	GWGCWC	1 cut(s)	1200
BsiHKCI	CYCGRG	4 cut(s)	191, 206, 408, 1386
BsiSI	CCGG	9 cut(s)	197, 207, 278, 389, 409, 521, 644, 745, 1079
BslI	CCNNNNNNNGG	9 cut(s)	28, 29, 226, 313, 337, 540, 967, 980, 1402
BsmAI	GTCTC	2 cut(s)	1030, 1348
BsmBI	CGTCTC	1 cut(s)	1030
BsmI	GAATGC	1 cut(s)	251
BsoBI	CYCGRG	4 cut(s)	191, 206, 408, 1386
Bsp119I	TTCGAA	1 cut(s)	1537
Bsp1286I	GDGCHC	2 cut(s)	859, 1200
Bsp13I	TCCGGA	1 cut(s)	277
Bsp143I	GATC	7 cut(s)	432, 1153, 1183, 1258, 1365, 1409, 1468
Bsp1720I	GCTNAGC	1 cut(s)	1509
Bsp19I	CCATGG	1 cut(s)	1226
Bsp68I	TCGCGA	1 cut(s)	1290
BspACI	CCGC	4 cut(s)	425, 641, 767, 1477
BspCNI	CTCAG	5 cut(s)	150, 328, 679, 1120, 1501
BspEI	TCCGGA	1 cut(s)	277
BspFNI	CGCG	1 cut(s)	1290
BspLI	GGNNCC	3 cut(s)	38, 858, 972
BspMAI	CTGCAG	1 cut(s)	1498
BspPI	GGATC	3 cut(s)	1161, 1266, 1373
BspQI	GCTCTTC	1 cut(s)	1483
BspT104I	TTCGAA	1 cut(s)	1537
BsrDI	GCAATG	1 cut(s)	1260
BsrFI	RCCGGY	1 cut(s)	744
BsrI	ACTGG	2 cut(s)	1318, 1546
BssAI	RCCGGY	1 cut(s)	744
BssECI	CCNNGG	7 cut(s)	206, 408, 539, 900, 965, 1213, 1226
BssMI	GATC	7 cut(s)	432, 1153, 1183, 1258, 1365, 1409, 1468
BssT1I	CCWWGG	2 cut(s)	965, 1226
Bst2UI	CCWGG	3 cut(s)	901, 1215, 1419
Bst4CI	ACNGT	1 cut(s)	1359
Bst6I	CTCTTC	2 cut(s)	1011, 1483
BstAPI	GCANNNNNTGC	2 cut(s)	502, 800
BstBI	TTCGAA	1 cut(s)	1537
BstC8I	GCNNGC	3 cut(s)	385, 498, 1506
BstDEI	CTNAG	8 cut(s)	137, 336, 666, 1045, 1128, 1187, 1379, 1509
BstDSI	CCRYGG	1 cut(s)	1226
BstF5I	GGATG	3 cut(s)	853, 885, 1351
BstFNI	CGCG	1 cut(s)	1290
BstKTI	GATC	7 cut(s)	435, 1156, 1186, 1261, 1368, 1412, 1471
BstMAI	GTCTC	2 cut(s)	1030, 1348
BstMBI	GATC	7 cut(s)	432, 1153, 1183, 1258, 1365, 1409, 1468
BstMWI	GCNNNNNNNGC	9 cut(s)	202, 502, 640, 649, 800, 929, 1457, 1490, 1510
BstNI	CCWGG	3 cut(s)	901, 1215, 1419
BstNSI	RCATGY	1 cut(s)	1162
BstSFI	CTRYAG	2 cut(s)	1023, 1494
BstUI	CGCG	1 cut(s)	1290
BstV1I	GCAGC	5 cut(s)	907, 910, 1444, 1447, 1480
BstX2I	RGATCY	2 cut(s)	1183, 1365
BstXI	CCANNNNNNTGG	1 cut(s)	661
BstYI	RGATCY	2 cut(s)	1183, 1365
BtgI	CCRYGG	1 cut(s)	1226
BtrI	CACGTC	1 cut(s)	1040
BtsCI	GGATG	3 cut(s)	853, 885, 1351
BtuMI	TCGCGA	1 cut(s)	1290
Cac8I	GCNNGC	3 cut(s)	385, 498, 1506
CaiI	CAGNNNCTG	2 cut(s)	226, 1357
Cfr10I	RCCGGY	1 cut(s)	744
Cfr9I	CCCGGG	2 cut(s)	206, 408
Csp6I	GTAC	5 cut(s)	469, 637, 679, 1052, 1302
CspAI	ACCGGT	1 cut(s)	744
CviAII	CATG	7 cut(s)	535, 715, 795, 868, 1100, 1159, 1227
CviQI	GTAC	5 cut(s)	469, 637, 679, 1052, 1302
DdeI	CTNAG	8 cut(s)	137, 336, 666, 1045, 1128, 1187, 1379, 1509
DpnI	GATC	7 cut(s)	434, 1155, 1185, 1260, 1367, 1411, 1470
DpnII	GATC	7 cut(s)	432, 1153, 1183, 1258, 1365, 1409, 1468
EaeI	YGGCCR	1 cut(s)	1076
Eam1104I	CTCTTC	2 cut(s)	1011, 1483
EarI	CTCTTC	2 cut(s)	1011, 1483
EciI	GGCGGA	1 cut(s)	1492
Ecl136II	GAGCTC	1 cut(s)	1198
Eco130I	CCWWGG	2 cut(s)	965, 1226
Eco24I	GRGCYC	2 cut(s)	859, 1200
Eco47I	GGWCC	4 cut(s)	742, 764, 1444, 1544
Eco53kI	GAGCTC	1 cut(s)	1198
Eco57I	CTGAAG	1 cut(s)	470
Eco88I	CYCGRG	4 cut(s)	191, 206, 408, 1386
EcoICRI	GAGCTC	1 cut(s)	1198
EcoRI	GAATTC	1 cut(s)	1533
EcoRII	CCWGG	3 cut(s)	899, 1213, 1417
EcoT14I	CCWWGG	2 cut(s)	965, 1226
EcoT38I	GRGCYC	2 cut(s)	859, 1200
ErhI	CCWWGG	2 cut(s)	965, 1226
Esp3I	CGTCTC	1 cut(s)	1030
FaeI	CATG	7 cut(s)	538, 718, 798, 871, 1103, 1162, 1230
FatI	CATG	7 cut(s)	534, 714, 794, 867, 1099, 1158, 1226
FauI	CCCGC	1 cut(s)	648
FblI	GTMKAC	1 cut(s)	1392
Fnu4HI	GCNGC	5 cut(s)	921, 924, 1458, 1461, 1494
FokI	GGATG	3 cut(s)	860, 892, 1358
FriOI	GRGCYC	2 cut(s)	859, 1200
Fsp4HI	GCNGC	5 cut(s)	921, 924, 1458, 1461, 1494
FspBI	CTAG	5 cut(s)	296, 1095, 1119, 1203, 1485
GluI	GCNGC	5 cut(s)	921, 924, 1458, 1461, 1494
GsaI	CCCAGC	1 cut(s)	807
GsuI	CTGGAG	4 cut(s)	248, 335, 710, 791
HapII	CCGG	9 cut(s)	197, 207, 278, 389, 409, 521, 644, 745, 1079
Hin1II	CATG	7 cut(s)	538, 718, 798, 871, 1103, 1162, 1230
HinfI	GANTC	9 cut(s)	89, 292, 299, 310, 566, 862, 912, 957, 1389
HpaII	CCGG	9 cut(s)	197, 207, 278, 389, 409, 521, 644, 745, 1079
Hpy166II	GTNNAC	2 cut(s)	286, 1393
Hpy188I	TCNGA	9 cut(s)	41, 187, 304, 571, 861, 1088, 1129, 1263, 1473
Hpy188III	TCNNGA	8 cut(s)	278, 296, 314, 403, 1203, 1289, 1331, 1351
Hpy8I	GTNNAC	2 cut(s)	286, 1393
HpyAV	CCTTC	6 cut(s)	163, 445, 538, 556, 1435, 1474
HpyCH4III	ACNGT	1 cut(s)	1359
HpyCH4IV	ACGT	2 cut(s)	886, 1039
HpyCH4V	TGCA	4 cut(s)	593, 926, 1463, 1496
HpyF10VI	GCNNNNNNNGC	9 cut(s)	202, 502, 640, 649, 800, 929, 1457, 1490, 1510
HpyF3I	CTNAG	8 cut(s)	137, 336, 666, 1045, 1128, 1187, 1379, 1509
HpySE526I	ACGT	2 cut(s)	886, 1039
Hsp92II	CATG	7 cut(s)	538, 718, 798, 871, 1103, 1162, 1230
Kpn2I	TCCGGA	1 cut(s)	277
Kzo9I	GATC	7 cut(s)	432, 1153, 1183, 1258, 1365, 1409, 1468
LguI	GCTCTTC	1 cut(s)	1483
LmnI	GCTCC	4 cut(s)	229, 445, 772, 862
Lsp1109I	GCAGC	5 cut(s)	907, 910, 1444, 1447, 1480
LweI	GCATC	2 cut(s)	213, 1444
MaeI	CTAG	5 cut(s)	296, 1095, 1119, 1203, 1485
MaeII	ACGT	2 cut(s)	886, 1039
MaeIII	GTNAC	1 cut(s)	1040
MalI	GATC	7 cut(s)	434, 1155, 1185, 1260, 1367, 1411, 1470
MboI	GATC	7 cut(s)	432, 1153, 1183, 1258, 1365, 1409, 1468
MboII	GAAGA	6 cut(s)	88, 229, 331, 571, 1028, 1500
MflI	RGATCY	2 cut(s)	1183, 1365
MhlI	GDGCHC	2 cut(s)	859, 1200
MluCI	AATT	7 cut(s)	125, 1007, 1140, 1206, 1400, 1413, 1533
MlyI	GAGTC	5 cut(s)	83, 293, 575, 906, 1398
MmeI	TCCRAC	1 cut(s)	327
MroI	TCCGGA	1 cut(s)	277
MseI	TTAA	2 cut(s)	552, 1220
MslI	CAYNNNNRTG	2 cut(s)	221, 659
MspA1I	CMGCKG	1 cut(s)	769
MspI	CCGG	9 cut(s)	197, 207, 278, 389, 409, 521, 644, 745, 1079
Mva1269I	GAATGC	1 cut(s)	251
MvaI	CCWGG	3 cut(s)	901, 1215, 1419
MvnI	CGCG	1 cut(s)	1290
MwoI	GCNNNNNNNGC	9 cut(s)	202, 502, 640, 649, 800, 929, 1457, 1490, 1510
NciI	CCSGG	7 cut(s)	207, 208, 389, 409, 410, 645, 1080
NcoI	CCATGG	1 cut(s)	1226
NdeII	GATC	7 cut(s)	432, 1153, 1183, 1258, 1365, 1409, 1468
NlaIII	CATG	7 cut(s)	538, 718, 798, 871, 1103, 1162, 1230
NlaIV	GGNNCC	3 cut(s)	38, 858, 972
NmeAIII	GCCGAG	2 cut(s)	439, 564
NmuCI	GTSAC	1 cut(s)	1040
NruI	TCGCGA	1 cut(s)	1290
NspI	RCATGY	1 cut(s)	1162
NspV	TTCGAA	1 cut(s)	1537
PciSI	GCTCTTC	1 cut(s)	1483
PctI	GAATGC	1 cut(s)	251
PfeI	GAWTC	4 cut(s)	292, 310, 862, 957
PflMI	CCANNNNNTGG	2 cut(s)	226, 1402
PinAI	ACCGGT	1 cut(s)	744
PkrI	GCNGC	5 cut(s)	922, 925, 1459, 1462, 1495
PleI	GAGTC	5 cut(s)	83, 293, 574, 906, 1397
PpsI	GAGTC	5 cut(s)	83, 293, 574, 906, 1397
PsiI	TTATAA	1 cut(s)	779
Psp124BI	GAGCTC	1 cut(s)	1200
Psp6I	CCWGG	3 cut(s)	899, 1213, 1417
PspFI	CCCAGC	1 cut(s)	803
PspGI	CCWGG	3 cut(s)	899, 1213, 1417
PspN4I	GGNNCC	3 cut(s)	38, 858, 972
PstI	CTGCAG	1 cut(s)	1498
PstNI	CAGNNNCTG	2 cut(s)	226, 1357
PsuI	RGATCY	2 cut(s)	1183, 1365
RruI	TCGCGA	1 cut(s)	1290
RsaI	GTAC	5 cut(s)	470, 638, 680, 1053, 1303
RsaNI	GTAC	5 cut(s)	469, 637, 679, 1052, 1302
RseI	CAYNNNNRTG	2 cut(s)	221, 659
SacI	GAGCTC	1 cut(s)	1200
SapI	GCTCTTC	1 cut(s)	1483
SaqAI	TTAA	2 cut(s)	552, 1220
SatI	GCNGC	5 cut(s)	921, 924, 1458, 1461, 1494
Sau3AI	GATC	7 cut(s)	432, 1153, 1183, 1258, 1365, 1409, 1468
ScaI	AGTACT	1 cut(s)	1053
SchI	GAGTC	5 cut(s)	83, 293, 575, 906, 1398
SduI	GDGCHC	2 cut(s)	859, 1200
SfaNI	GCATC	2 cut(s)	213, 1444
SfcI	CTRYAG	2 cut(s)	1023, 1494
SfuI	TTCGAA	1 cut(s)	1537
SinI	GGWCC	4 cut(s)	742, 764, 1444, 1544
SmaI	CCCGGG	2 cut(s)	208, 410
SmiMI	CAYNNNNRTG	2 cut(s)	221, 659
SmlI	CTYRAG	1 cut(s)	1193
SmoI	CTYRAG	1 cut(s)	1193
SrfI	GCCCGGGC	1 cut(s)	208
Sse9I	AATT	7 cut(s)	125, 1007, 1140, 1206, 1400, 1413, 1533
SsiI	CCGC	4 cut(s)	425, 641, 767, 1477
SspMI	CTAG	5 cut(s)	296, 1095, 1119, 1203, 1485
SstI	GAGCTC	1 cut(s)	1200
StyI	CCWWGG	2 cut(s)	965, 1226
TaaI	ACNGT	1 cut(s)	1359
TaiI	ACGT	2 cut(s)	889, 1042
TaqI	TCGA	4 cut(s)	754, 1330, 1425, 1537
TasI	AATT	7 cut(s)	125, 1007, 1140, 1206, 1400, 1413, 1533
TatI	WGTACW	1 cut(s)	1051
TfiI	GAWTC	4 cut(s)	292, 310, 862, 957
Tru1I	TTAA	2 cut(s)	552, 1220
Tru9I	TTAA	2 cut(s)	552, 1220
TseFI	GTSAC	1 cut(s)	1040
TseI	GCWGC	5 cut(s)	920, 923, 1457, 1460, 1493
Tsp45I	GTSAC	1 cut(s)	1040
TspDTI	ATGAA	3 cut(s)	453, 817, 864
TspMI	CCCGGG	2 cut(s)	206, 408
Van91I	CCANNNNNTGG	2 cut(s)	226, 1402
VpaK11BI	GGWCC	4 cut(s)	742, 764, 1444, 1544
XapI	RAATTY	1 cut(s)	1533
XbaI	TCTAGA	2 cut(s)	295, 1202
XceI	RCATGY	1 cut(s)	1162
XmaI	CCCGGG	2 cut(s)	206, 408
XmiI	GTMKAC	1 cut(s)	1392
XspI	CTAG	5 cut(s)	296, 1095, 1119, 1203, 1485
ZrmI	AGTACT	1 cut(s)	1053

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.