Rh3BG183800

Phosphoadenosine phosphosulfate reductase family

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3B
Physical Location & Seq
Reverse (-)
16196528 .. 16205268
8741 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3BG183800.1

Sequence Viewer

Length: 1353 bp
ATGGAGATTGACAAGGCAATCAGGGAGTGTGATGATCGAAGGCTTAAGACCAAGTACAACAACGCTATCTATGTTATCCAGAGAGCTCTTGCGCTCTACTCAATTGAAGAGGTCGCGTTCAGCTTCAATGGGGGAAAGGATTCAACTGTTTTGCTGCATCTACTTAGGGCTGGCTACTCTTTGCATAAAGGGGAACAGAGCTGTATAAATGGGGGTGTAAAAGATTTTCCAATGCGAACAATATATTTCGAGTGCCCATCTGCTTTCCCTGAAATCAACTCGTTTACTTATGATACAGCCAATATGTATGGTTTGCAACTGGATATCATACGCTCAGATTTCAAGTCTGGTTTGGAGGCTTTACTAAAGACCAAACCAATCAGAGCAATTTTTCTCGGTGTCCGAATGGGTGATCCTACTGCGGTAGGGCAAGAACAGTTCTCTCCTAGTTCACCTGGATGGCCACCTTTCATGAGGGTAAACCCTATCTTGGATTGGTCATACAGAGATGTGTGGGCCTTTCTCTTAACTTCCAAGGTTCAGTACTGCAGTCTTTATGATCAAGGTTATACTTCAATTGGAAGCATATACGATACAGTTCCAAATTCATTATTGAGCATGAACAATTCCTCCAGCAGCAAAGAAGTATTTAGACCCGCTTATTTGCTCTCTGATGGAAGGTTAGAGAGAGCGGGGAGAGTTAAAAAACTTCCTCCTTCAGTTAGTGGAAAGAAGCCTGTTGTTGCCAATGGCCTTAACAGCATGGACTTACCCAAGAGTAGCTTACTCATGGCGTCAGCCATAGCTGTAGGGGATGAGATTCTGCTTGGCACTGCTGAGGATCAATTAGGGCATTCACTGTGTAGAAAGCTCCATTCCATTGGTTGGTCAGTATCACAAACAACCGTTGTACGAAATGATATAGATTCTGTGGCTGAAGAAGTTGAGCGACGACAATCAACTAATGATATGGTATTTATATATGGAGGGGTAGGCCCACTCCATTCAGATGTTACTTTGGCAGGTGTTGCAAAGGCTTTTGGGGTTCGTCTGGCTCCTGATGAAGAATTTGAAGAATATCTGAGGCATCTTATAGGTGATCAATGCACTGGTGACCGGAATGAGATGGCTCTGTTGCCCGAGGGTATTACTGAATTGTTGCATCATGAAAAGTTGATTGTCCCTTTGATCAAGTGTAAAAATGTAATAATTTTTACAGCAACAAACGTCCTGGAGCTAGACGATGAGTGGAACTGTCTAATTGAACTAATGAGGTCCAGTGGCGAGTTAGTAATGACACAACCATTTGTATCCAAGTGCTTGACAACCATTCTTGCAGATGTACGTATTTGA

Protein Analysis

450

Amino Acids

50.04

Weight (kDa)

5.52

Isoelectric Point (pI)

42.02

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PAPS_reduct PF01507 38 - 200 1.5e-22 Phosphoadenosine phosphosulfate reductase domain
MoCF_biosynth PF00994 268 - 367 7.2e-18 Probable molybdopterin binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1013
Acc36I ACCTGC 1 cut(s) 1013
AccB7I CCANNNNNTGG 1 cut(s) 885
AccBSI CCGCTC 1 cut(s) 692
AccII CGCG 1 cut(s) 116
AciI CCGC 3 cut(s) 422, 657, 692
AclWI GGATC 2 cut(s) 407, 849
AcoI YGGCCR 1 cut(s) 461
AcsI RAATTY 2 cut(s) 604, 1067
AcuI CTGAAG 2 cut(s) 702, 957
AcyI GRCGYC 1 cut(s) 794
AfaI GTAC 4 cut(s) 56, 545, 912, 1344
AfiI CCNNNNNNNGG 2 cut(s) 490, 885
AflII CTTAAG 1 cut(s) 44
AgsI TTSAA 7 cut(s) 107, 127, 144, 343, 576, 1073, 1265
AjnI CCWGG 2 cut(s) 454, 1230
AloI GAACNNNNNNTCC 2 cut(s) 614, 646
AluBI AGCT 7 cut(s) 86, 123, 201, 783, 806, 871, 1237
AluI AGCT 7 cut(s) 86, 123, 201, 783, 806, 871, 1237
Alw21I GWGCWC 1 cut(s) 88
AlwI GGATC 2 cut(s) 407, 849
Ama87I CYCGRG 1 cut(s) 1139
AoxI GGCC 4 cut(s) 461, 516, 751, 994
ApeKI GCWGC 2 cut(s) 154, 636
ApoI RAATTY 2 cut(s) 604, 1067
Asp700I GAANNNNTTC 1 cut(s) 139
AspLEI GCGC 1 cut(s) 94
AspS9I GGNCC 3 cut(s) 516, 995, 1275
AsuHPI GGTGA 4 cut(s) 422, 444, 1109, 1124
AvaI CYCGRG 1 cut(s) 1139
AvaII GGWCC 1 cut(s) 1275
BaeGI GKGCMC 1 cut(s) 257
BalI TGGCCA 1 cut(s) 463
BanII GRGCYC 1 cut(s) 88
Bbv12I GWGCWC 1 cut(s) 88
BbvCI CCTCAGC 1 cut(s) 837
BbvI GCAGC 2 cut(s) 141, 648
BccI CCATC 4 cut(s) 265, 453, 668, 1120
BciT130I CCWGG 2 cut(s) 456, 1232
BciVI GTATCC 1 cut(s) 1321
BclI TGATCA 3 cut(s) 559, 1099, 1188
BfaI CTAG 2 cut(s) 447, 1238
BfmI CTRYAG 2 cut(s) 547, 807
BfrI CTTAAG 1 cut(s) 44
BfuAI ACCTGC 1 cut(s) 1013
BfuI GTATCC 1 cut(s) 1321
BisI GCNGC 2 cut(s) 155, 637
BlsI GCNGC 2 cut(s) 156, 638
BmcAI AGTACT 1 cut(s) 545
Bme1390I CCNGG 2 cut(s) 456, 1232
Bme18I GGWCC 1 cut(s) 1275
BmeT110I CYCGRG 1 cut(s) 1139
BmgT120I GGNCC 3 cut(s) 516, 995, 1275
BmiI GGNNCC 1 cut(s) 1056
BmrFI CCNGG 2 cut(s) 456, 1232
BmsI GCATC 3 cut(s) 166, 1096, 1171
BpmI CTGGAG 2 cut(s) 616, 1253
Bpu10I CCTNAGC 1 cut(s) 837
BsaAI YACGTR 1 cut(s) 1346
BsaHI GRCGYC 1 cut(s) 794
BsaJI CCNNGG 2 cut(s) 534, 1140
BsaWI WCCGGW 1 cut(s) 1116
BsaXI ACNNNNNCTCC 2 cut(s) 614, 644
Bsc4I CCNNNNNNNGG 2 cut(s) 490, 885
Bse1I ACTGG 3 cut(s) 324, 1114, 1278
BseBI CCWGG 2 cut(s) 456, 1232
BseDI CCNNGG 2 cut(s) 534, 1140
BseGI GGATG 2 cut(s) 464, 820
BseLI CCNNNNNNNGG 2 cut(s) 490, 885
BseMII CTCAG 3 cut(s) 348, 828, 1073
BseNI ACTGG 3 cut(s) 324, 1114, 1278
BseSI GKGCMC 1 cut(s) 257
BseXI GCAGC 2 cut(s) 141, 648
Bsh1236I CGCG 1 cut(s) 116
BshFI GGCC 4 cut(s) 463, 518, 753, 996
BsiHKAI GWGCWC 1 cut(s) 88
BsiHKCI CYCGRG 1 cut(s) 1139
BsiSI CCGG 1 cut(s) 1117
BslFI GGGAC 1 cut(s) 1166
BslI CCNNNNNNNGG 2 cut(s) 490, 885
BsmFI GGGAC 1 cut(s) 1166
BsmI GAATGC 1 cut(s) 853
BsnI GGCC 4 cut(s) 463, 518, 753, 996
BsoBI CYCGRG 1 cut(s) 1139
Bsp1286I GDGCHC 2 cut(s) 88, 257
Bsp143I GATC 6 cut(s) 34, 412, 559, 841, 1099, 1188
BspACI CCGC 3 cut(s) 422, 657, 692
BspANI GGCC 4 cut(s) 463, 518, 753, 996
BspCNI CTCAG 3 cut(s) 347, 829, 1074
BspFNI CGCG 1 cut(s) 116
BspHI TCATGA 2 cut(s) 471, 1165
BspLI GGNNCC 1 cut(s) 1056
BspMAI CTGCAG 1 cut(s) 551
BspMI ACCTGC 1 cut(s) 1013
BspPI GGATC 2 cut(s) 407, 849
BspTI CTTAAG 1 cut(s) 44
BsrBI CCGCTC 1 cut(s) 692
BsrI ACTGG 3 cut(s) 324, 1114, 1278
BssECI CCNNGG 2 cut(s) 534, 1140
BssMI GATC 6 cut(s) 34, 412, 559, 841, 1099, 1188
BssNI GRCGYC 1 cut(s) 794
BssT1I CCWWGG 1 cut(s) 534
Bst2UI CCWGG 2 cut(s) 456, 1232
Bst4CI ACNGT 6 cut(s) 148, 438, 598, 861, 907, 1256
Bst6I CTCTTC 1 cut(s) 102
BstACI GRCGYC 1 cut(s) 794
BstAFI CTTAAG 1 cut(s) 44
BstAPI GCANNNNNTGC 1 cut(s) 1028
BstBAI YACGTR 1 cut(s) 1346
BstC8I GCNNGC 1 cut(s) 172
BstDEI CTNAG 4 cut(s) 164, 334, 837, 1082
BstEII GGTNACC 1 cut(s) 1112
BstF5I GGATG 2 cut(s) 464, 820
BstFNI CGCG 1 cut(s) 116
BstHHI GCGC 1 cut(s) 94
BstKTI GATC 6 cut(s) 37, 415, 562, 844, 1102, 1191
BstMBI GATC 6 cut(s) 34, 412, 559, 841, 1099, 1188
BstMWI GCNNNNNNNGC 2 cut(s) 759, 1028
BstNI CCWGG 2 cut(s) 456, 1232
BstPI GGTNACC 1 cut(s) 1112
BstSCI CCNGG 2 cut(s) 454, 1230
BstSFI CTRYAG 2 cut(s) 547, 807
BstSLI GKGCMC 1 cut(s) 257
BstSNI TACGTA 1 cut(s) 1346
BstUI CGCG 1 cut(s) 116
BstV1I GCAGC 2 cut(s) 141, 648
BstXI CCANNNNNNTGG 1 cut(s) 881
BsuI GTATCC 1 cut(s) 1321
BsuRI GGCC 4 cut(s) 463, 518, 753, 996
BtsCI GGATG 2 cut(s) 464, 820
BtsI GCAGTG 1 cut(s) 831
BtsIMutI CAGTG 4 cut(s) 831, 857, 1107, 1285
BveI ACCTGC 1 cut(s) 1013
Cac8I GCNNGC 1 cut(s) 172
CciI TCATGA 2 cut(s) 471, 1165
CfoI GCGC 1 cut(s) 94
Cfr13I GGNCC 3 cut(s) 516, 995, 1275
CseI GACGC 1 cut(s) 783
Csp6I GTAC 4 cut(s) 55, 544, 911, 1343
CviAII CATG 5 cut(s) 472, 619, 763, 790, 1166
CviQI GTAC 4 cut(s) 55, 544, 911, 1343
DdeI CTNAG 4 cut(s) 164, 334, 837, 1082
DpnI GATC 6 cut(s) 36, 414, 561, 843, 1101, 1190
DpnII GATC 6 cut(s) 34, 412, 559, 841, 1099, 1188
EaeI YGGCCR 1 cut(s) 461
Eam1104I CTCTTC 1 cut(s) 102
EarI CTCTTC 1 cut(s) 102
Ecl136II GAGCTC 1 cut(s) 86
Eco105I TACGTA 1 cut(s) 1346
Eco130I CCWWGG 1 cut(s) 534
Eco24I GRGCYC 1 cut(s) 88
Eco32I GATATC 1 cut(s) 325
Eco47I GGWCC 1 cut(s) 1275
Eco53kI GAGCTC 1 cut(s) 86
Eco57I CTGAAG 2 cut(s) 702, 957
Eco88I CYCGRG 1 cut(s) 1139
Eco91I GGTNACC 1 cut(s) 1112
EcoICRI GAGCTC 1 cut(s) 86
EcoO65I GGTNACC 1 cut(s) 1112
EcoRII CCWGG 2 cut(s) 454, 1230
EcoRV GATATC 1 cut(s) 325
EcoT14I CCWWGG 1 cut(s) 534
EcoT38I GRGCYC 1 cut(s) 88
ErhI CCWWGG 1 cut(s) 534
FaeI CATG 5 cut(s) 475, 622, 766, 793, 1169
FalI AAGNNNNNCTT 2 cut(s) 767, 799
FaqI GGGAC 1 cut(s) 1166
FatI CATG 5 cut(s) 471, 618, 762, 789, 1165
FauI CCCGC 2 cut(s) 664, 685
FbaI TGATCA 3 cut(s) 559, 1099, 1188
Fnu4HI GCNGC 2 cut(s) 155, 637
FokI GGATG 2 cut(s) 471, 827
FriOI GRGCYC 1 cut(s) 88
Fsp4HI GCNGC 2 cut(s) 155, 637
FspBI CTAG 2 cut(s) 447, 1238
GlaI GCGC 1 cut(s) 93
GluI GCNGC 2 cut(s) 155, 637
GsuI CTGGAG 2 cut(s) 616, 1253
HaeIII GGCC 4 cut(s) 463, 518, 753, 996
HapII CCGG 1 cut(s) 1117
HgaI GACGC 1 cut(s) 783
HhaI GCGC 1 cut(s) 94
Hin1I GRCGYC 1 cut(s) 794
Hin1II CATG 5 cut(s) 475, 622, 766, 793, 1169
Hin6I GCGC 1 cut(s) 92
HinP1I GCGC 1 cut(s) 92
HinfI GANTC 3 cut(s) 140, 820, 926
HpaII CCGG 1 cut(s) 1117
HphI GGTGA 4 cut(s) 422, 444, 1109, 1124
Hpy166II GTNNAC 3 cut(s) 285, 452, 481
Hpy188I TCNGA 6 cut(s) 337, 383, 404, 673, 1009, 1083
Hpy188III TCNNGA 4 cut(s) 79, 472, 1058, 1166
Hpy8I GTNNAC 3 cut(s) 285, 452, 481
Hpy99I CGWCG 1 cut(s) 954
HpyAV CCTTC 3 cut(s) 33, 672, 726
HpyCH4III ACNGT 6 cut(s) 148, 438, 598, 861, 907, 1256
HpyCH4IV ACGT 2 cut(s) 1227, 1345
HpyCH4V TGCA 8 cut(s) 157, 184, 316, 549, 1031, 1107, 1162, 1337
HpyF10VI GCNNNNNNNGC 2 cut(s) 759, 1028
HpyF3I CTNAG 4 cut(s) 164, 334, 837, 1082
HpySE526I ACGT 2 cut(s) 1227, 1345
Hsp92I GRCGYC 1 cut(s) 794
Hsp92II CATG 5 cut(s) 475, 622, 766, 793, 1169
HspAI GCGC 1 cut(s) 92
Ksp22I TGATCA 3 cut(s) 559, 1099, 1188
Kzo9I GATC 6 cut(s) 34, 412, 559, 841, 1099, 1188
LmnI GCTCC 3 cut(s) 876, 1060, 1234
Lsp1109I GCAGC 2 cut(s) 141, 648
LweI GCATC 3 cut(s) 166, 1096, 1171
MaeI CTAG 2 cut(s) 447, 1238
MaeII ACGT 2 cut(s) 1227, 1345
MaeIII GTNAC 2 cut(s) 1012, 1112
MalI GATC 6 cut(s) 36, 414, 561, 843, 1101, 1190
MbiI CCGCTC 1 cut(s) 692
MboI GATC 6 cut(s) 34, 412, 559, 841, 1099, 1188
MboII GAAGA 4 cut(s) 119, 950, 1076, 1085
MfeI CAATTG 2 cut(s) 102, 576
MhlI GDGCHC 2 cut(s) 88, 257
MlsI TGGCCA 1 cut(s) 463
MluNI TGGCCA 1 cut(s) 463
Mox20I TGGCCA 1 cut(s) 463
MroXI GAANNNNTTC 1 cut(s) 139
MscI TGGCCA 1 cut(s) 463
MseI TTAA 4 cut(s) 45, 527, 702, 756
MslI CAYNNNNRTG 2 cut(s) 457, 1008
Msp20I TGGCCA 1 cut(s) 463
MspCI CTTAAG 1 cut(s) 44
MspI CCGG 1 cut(s) 1117
MspR9I CCNGG 2 cut(s) 456, 1232
MunI CAATTG 2 cut(s) 102, 576
Mva1269I GAATGC 1 cut(s) 853
MvaI CCWGG 2 cut(s) 456, 1232
MvnI CGCG 1 cut(s) 116
MwoI GCNNNNNNNGC 2 cut(s) 759, 1028
NdeII GATC 6 cut(s) 34, 412, 559, 841, 1099, 1188
NlaIII CATG 5 cut(s) 475, 622, 766, 793, 1169
NlaIV GGNNCC 1 cut(s) 1056
NmuCI GTSAC 1 cut(s) 1112
PagI TCATGA 2 cut(s) 471, 1165
PaqCI CACCTGC 1 cut(s) 1013
PctI GAATGC 1 cut(s) 853
PdmI GAANNNNTTC 1 cut(s) 139
PfeI GAWTC 3 cut(s) 140, 820, 926
PflMI CCANNNNNTGG 1 cut(s) 885
PfoI TCCNGGA 1 cut(s) 1230
PkrI GCNGC 2 cut(s) 156, 638
Ppu21I YACGTR 1 cut(s) 1346
Psp124BI GAGCTC 1 cut(s) 88
Psp6I CCWGG 2 cut(s) 454, 1230
PspEI GGTNACC 1 cut(s) 1112
PspGI CCWGG 2 cut(s) 454, 1230
PspN4I GGNNCC 1 cut(s) 1056
PspPI GGNCC 3 cut(s) 516, 995, 1275
PstI CTGCAG 1 cut(s) 551
RsaI GTAC 4 cut(s) 56, 545, 912, 1344
RsaNI GTAC 4 cut(s) 55, 544, 911, 1343
RseI CAYNNNNRTG 2 cut(s) 457, 1008
SacI GAGCTC 1 cut(s) 88
SaqAI TTAA 4 cut(s) 45, 527, 702, 756
SatI GCNGC 2 cut(s) 155, 637
Sau3AI GATC 6 cut(s) 34, 412, 559, 841, 1099, 1188
Sau96I GGNCC 3 cut(s) 516, 995, 1275
ScaI AGTACT 1 cut(s) 545
ScrFI CCNGG 2 cut(s) 456, 1232
SduI GDGCHC 2 cut(s) 88, 257
SfaNI GCATC 3 cut(s) 166, 1096, 1171
SfcI CTRYAG 2 cut(s) 547, 807
SinI GGWCC 1 cut(s) 1275
SmiMI CAYNNNNRTG 2 cut(s) 457, 1008
SmlI CTYRAG 1 cut(s) 44
SmoI CTYRAG 1 cut(s) 44
SnaBI TACGTA 1 cut(s) 1346
SsiI CCGC 3 cut(s) 422, 657, 692
SspMI CTAG 2 cut(s) 447, 1238
SstI GAGCTC 1 cut(s) 88
StyD4I CCNGG 2 cut(s) 454, 1230
StyI CCWWGG 1 cut(s) 534
TaaI ACNGT 6 cut(s) 148, 438, 598, 861, 907, 1256
TaiI ACGT 2 cut(s) 1230, 1348
TaqI TCGA 2 cut(s) 37, 249
TatI WGTACW 2 cut(s) 54, 543
TfiI GAWTC 3 cut(s) 140, 820, 926
Tru1I TTAA 4 cut(s) 45, 527, 702, 756
Tru9I TTAA 4 cut(s) 45, 527, 702, 756
TscAI CASTG 4 cut(s) 838, 864, 1114, 1285
TseFI GTSAC 1 cut(s) 1112
TseI GCWGC 2 cut(s) 154, 636
Tsp45I GTSAC 1 cut(s) 1112
TspDTI ATGAA 5 cut(s) 460, 597, 635, 1077, 1182
TspRI CASTG 4 cut(s) 838, 864, 1114, 1285
Van91I CCANNNNNTGG 1 cut(s) 885
Vha464I CTTAAG 1 cut(s) 44
VpaK11BI GGWCC 1 cut(s) 1275
XapI RAATTY 2 cut(s) 604, 1067
XmnI GAANNNNTTC 1 cut(s) 139
XspI CTAG 2 cut(s) 447, 1238
ZrmI AGTACT 1 cut(s) 545
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.