Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0016528

Physical Location & Seq

Genomic Coordinates Forward (+)

16460482 .. 16461889

Gene Structure 1408 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G155600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 792 bp

ATGGCTAAGCGATCCAAAGCTCAAATACAAACCGAAATTTCCCAAAACCCCTCCATTTCCCCCAAAATACCATTCCGACCCCGCAAAATCCTAAAACTCTCCAACACCCCCACCACCAAGCCCCTCACCTCCTCCTCCTCCGCTCTCCCCAAAACCCTAAACCCATTAACCTCCCAATCCGAAGTCAACCTCGCCCTCCAACACTTACGCAGCTCCGACCCGAATTTAACGGCTCTGATCGACTCCTACAGCCCTCCGTCGTCGTTTGATTCCGGCCGTCCATTTCTATCGCTCGCAAGAAGCATTCTTTACCAGCAACTTGCCACCAAAGCCGCTCAATCGATCTACACACGATTCATTTCGCTCTGCGGAGGCGAGGAATCGGTGGTCGCCGACGTCGTTGCATCGCTCTCGGCCCAGCAGCTCCGAAATATCGGCGTCTCGGGCCGAAAGGCTTCGTATCTTCATGACTTGGCCGAGAAGTACAGTGATGGGACTTTGTCCGATTCTTCTATTCTGGAAATGGACGATGAGGCTCTGCTCACAATGCTCACCGTGGTGAAGGGAATTGGGGCTTGGTCGGTCCACATGTTCATGATTTTCTCACTTCGCAGACCGGATGTGCTTCCGATCGGCGATCTCGGTGTGAGGAAAGGGGTGCAGTTACTGTATGGTTTGAAGGAGTTGCCGAAGCCATTGGAGATGGAGCAGTTGTGTGAGAAATGGAGGCCTTATAGGTCTGTTGGGTCTTGGTACATGTGGAGGTACATGGAGGCCAAGGGGGTCTTATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003677 GO:0003684 GO:0003824 GO:0003905 GO:0005488 GO:0005575 GO:0006139 GO:0006259 GO:0006281 GO:0006284 GO:0006285 GO:0006304 GO:0006307 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0008150 GO:0008152 GO:0008725 GO:0009987 GO:0016787 GO:0016798 GO:0016799 GO:0019104 GO:0032131 GO:0032991 GO:0032993 GO:0033554 GO:0034641 GO:0035510 GO:0043170 GO:0043412 GO:0043733 GO:0043916 GO:0044237 GO:0044238 GO:0044260 GO:0045007 GO:0046483 GO:0050896 GO:0051716 GO:0052820 GO:0071704 GO:0090304 GO:0097159 GO:0140097 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

ko03410 map03410

Pfam Domains

Protein Families

HhH-GPD

Protein Analysis

264

Amino Acids

29.17

Weight (kDa)

9.45

Isoelectric Point (pI)

54.51

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0016528)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G50880
fragaria_vesca	FvH4_1g13180 FvH4_1g13180 FvH4_1g13192
malus_domestica	MD02G1146600.v1.1
prunus_persica	Prupe.7G155600_v2.0.a1
pyrus_communis	pycom15g22780
rosa_chinensis	RchiOBHm_Chr2g0101401
rosa_laevigata	RLG00000017075
rosa_rugosa	Rorug02G0098500
rosa_samantha	Rh2AG146600 Rh2BG152000 Rh2DG152100
rosa_wichuraiana	Rw2G011430

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	399
AccBSI	CCGCTC	2 cut(s)	143, 335
AciI	CCGC	4 cut(s)	82, 141, 333, 369
AclWI	GGATC	1 cut(s)	6
AcoI	YGGCCR	2 cut(s)	274, 474
AcsI	RAATTY	2 cut(s)	36, 223
AcyI	GRCGYC	2 cut(s)	396, 438
AfaI	GTAC	3 cut(s)	485, 755, 767
AflIII	ACRYGT	2 cut(s)	588, 756
AgsI	TTSAA	1 cut(s)	679
AjuI	GAANNNNNNNTTGG	4 cut(s)	56, 88, 559, 591
AleI	CACNNNNGTG	1 cut(s)	557
AluBI	AGCT	3 cut(s)	20, 213, 424
AluI	AGCT	3 cut(s)	20, 213, 424
Alw26I	GTCTC	1 cut(s)	445
AlwI	GGATC	1 cut(s)	6
AlwNI	CAGNNNCTG	1 cut(s)	667
Ama87I	CYCGRG	1 cut(s)	442
AoxI	GGCC	6 cut(s)	274, 414, 445, 474, 728, 774
ApeKI	GCWGC	2 cut(s)	210, 421
ApoI	RAATTY	2 cut(s)	36, 223
Asp700I	GAANNNNTTC	1 cut(s)	454
AspS9I	GGNCC	3 cut(s)	415, 445, 583
AsuHPI	GGTGA	3 cut(s)	118, 544, 571
AvaI	CYCGRG	1 cut(s)	442
AvaII	GGWCC	1 cut(s)	583
BbvI	GCAGC	2 cut(s)	222, 433
BccI	CCATC	2 cut(s)	485, 697
BceAI	ACGGC	2 cut(s)	246, 261
BcgI	CGANNNNNNTGC	4 cut(s)	383, 393, 417, 427
BcoDI	GTCTC	1 cut(s)	445
BfmI	CTRYAG	1 cut(s)	247
BisI	GCNGC	3 cut(s)	211, 333, 422
BlpI	GCTNAGC	1 cut(s)	6
BlsI	GCNGC	3 cut(s)	212, 334, 423
Bme18I	GGWCC	1 cut(s)	583
BmeT110I	CYCGRG	1 cut(s)	442
BmgT120I	GGNCC	3 cut(s)	415, 445, 583
BmsI	GCATC	1 cut(s)	413
Bpu1102I	GCTNAGC	1 cut(s)	6
Bsa29I	ATCGAT	1 cut(s)	341
BsaHI	GRCGYC	2 cut(s)	396, 438
BsaJI	CCNNGG	2 cut(s)	555, 777
BsaWI	WCCGGW	1 cut(s)	616
BsaXI	ACNNNNNCTCC	2 cut(s)	698, 728
BseCI	ATCGAT	1 cut(s)	341
BseDI	CCNNGG	2 cut(s)	555, 777
BseGI	GGATG	1 cut(s)	625
BseRI	GAGGAG	3 cut(s)	121, 124, 127
BseX3I	CGGCCG	1 cut(s)	274
BseXI	GCAGC	2 cut(s)	222, 433
BseYI	CCCAGC	1 cut(s)	417
BsgI	GTGCAG	1 cut(s)	680
Bsh1285I	CGRYCG	2 cut(s)	277, 633
BshFI	GGCC	6 cut(s)	276, 416, 447, 476, 730, 776
BshVI	ATCGAT	1 cut(s)	341
BsiEI	CGRYCG	2 cut(s)	277, 633
BsiHKCI	CYCGRG	1 cut(s)	442
BsiSI	CCGG	2 cut(s)	273, 617
BslFI	GGGAC	1 cut(s)	508
BsmAI	GTCTC	1 cut(s)	445
BsmBI	CGTCTC	1 cut(s)	445
BsmFI	GGGAC	1 cut(s)	508
BsmI	GAATGC	1 cut(s)	303
BsnI	GGCC	6 cut(s)	276, 416, 447, 476, 730, 776
BsoBI	CYCGRG	1 cut(s)	442
Bsp143I	GATC	5 cut(s)	11, 237, 342, 630, 637
Bsp1720I	GCTNAGC	1 cut(s)	6
BspACI	CCGC	4 cut(s)	82, 141, 333, 369
BspANI	GGCC	6 cut(s)	276, 416, 447, 476, 730, 776
BspDI	ATCGAT	1 cut(s)	341
BspHI	TCATGA	2 cut(s)	466, 594
BspPI	GGATC	1 cut(s)	6
BsrBI	CCGCTC	2 cut(s)	143, 335
BssECI	CCNNGG	2 cut(s)	555, 777
BssMI	GATC	5 cut(s)	11, 237, 342, 630, 637
BssNI	GRCGYC	2 cut(s)	396, 438
BssT1I	CCWWGG	1 cut(s)	777
Bst4CI	ACNGT	3 cut(s)	488, 556, 669
BstACI	GRCGYC	2 cut(s)	396, 438
BstC8I	GCNNGC	1 cut(s)	294
BstDEI	CTNAG	1 cut(s)	6
BstDSI	CCRYGG	1 cut(s)	555
BstF5I	GGATG	1 cut(s)	625
BstKTI	GATC	5 cut(s)	14, 240, 345, 633, 640
BstMAI	GTCTC	1 cut(s)	445
BstMBI	GATC	5 cut(s)	11, 237, 342, 630, 637
BstMCI	CGRYCG	2 cut(s)	277, 633
BstMWI	GCNNNNNNNGC	3 cut(s)	329, 444, 547
BstNSI	RCATGY	2 cut(s)	592, 760
BstSFI	CTRYAG	1 cut(s)	247
BstV1I	GCAGC	2 cut(s)	222, 433
BstZI	CGGCCG	1 cut(s)	274
Bsu15I	ATCGAT	1 cut(s)	341
BsuRI	GGCC	6 cut(s)	276, 416, 447, 476, 730, 776
BsuTUI	ATCGAT	1 cut(s)	341
BtgI	CCRYGG	1 cut(s)	555
BtgZI	GCGATG	1 cut(s)	390
BtsCI	GGATG	1 cut(s)	625
BtsIMutI	CAGTG	1 cut(s)	493
Cac8I	GCNNGC	1 cut(s)	294
CaiI	CAGNNNCTG	1 cut(s)	667
CciI	TCATGA	2 cut(s)	466, 594
Cfr13I	GGNCC	3 cut(s)	415, 445, 583
ClaI	ATCGAT	1 cut(s)	341
CseI	GACGC	1 cut(s)	427
Csp6I	GTAC	3 cut(s)	484, 754, 766
CviAII	CATG	5 cut(s)	467, 589, 595, 757, 769
CviQI	GTAC	3 cut(s)	484, 754, 766
DdeI	CTNAG	1 cut(s)	6
DpnI	GATC	5 cut(s)	13, 239, 344, 632, 639
DpnII	GATC	5 cut(s)	11, 237, 342, 630, 637
EaeI	YGGCCR	2 cut(s)	274, 474
EagI	CGGCCG	1 cut(s)	274
EclXI	CGGCCG	1 cut(s)	274
Eco130I	CCWWGG	1 cut(s)	777
Eco147I	AGGCCT	1 cut(s)	730
Eco47I	GGWCC	1 cut(s)	583
Eco52I	CGGCCG	1 cut(s)	274
Eco88I	CYCGRG	1 cut(s)	442
EcoT14I	CCWWGG	1 cut(s)	777
ErhI	CCWWGG	1 cut(s)	777
Esp3I	CGTCTC	1 cut(s)	445
FaeI	CATG	5 cut(s)	470, 592, 598, 760, 772
FaiI	YATR	8 cut(s)	468, 590, 596, 672, 735, 758, 770, 790
FalI	AAGNNNNNCTT	1 cut(s)	770
FaqI	GGGAC	1 cut(s)	508
FatI	CATG	5 cut(s)	466, 588, 594, 756, 768
FauI	CCCGC	1 cut(s)	89
Fnu4HI	GCNGC	3 cut(s)	211, 333, 422
FokI	GGATG	1 cut(s)	632
Fsp4HI	GCNGC	3 cut(s)	211, 333, 422
GluI	GCNGC	3 cut(s)	211, 333, 422
GsaI	CCCAGC	1 cut(s)	421
HaeIII	GGCC	6 cut(s)	276, 416, 447, 476, 730, 776
HapII	CCGG	2 cut(s)	273, 617
HgaI	GACGC	1 cut(s)	427
Hin1I	GRCGYC	2 cut(s)	396, 438
Hin1II	CATG	5 cut(s)	470, 592, 598, 760, 772
HincII	GTYRAC	1 cut(s)	187
HindII	GTYRAC	1 cut(s)	187
HinfI	GANTC	5 cut(s)	242, 269, 354, 380, 506
HpaII	CCGG	2 cut(s)	273, 617
HphI	GGTGA	3 cut(s)	118, 544, 571
Hpy166II	GTNNAC	2 cut(s)	187, 586
Hpy188I	TCNGA	7 cut(s)	77, 181, 217, 237, 428, 505, 630
Hpy188III	TCNNGA	3 cut(s)	467, 518, 595
Hpy8I	GTNNAC	2 cut(s)	187, 586
Hpy99I	CGWCG	4 cut(s)	262, 265, 398, 401
HpyAV	CCTTC	2 cut(s)	556, 673
HpyCH4III	ACNGT	3 cut(s)	488, 556, 669
HpyCH4IV	ACGT	1 cut(s)	396
HpyCH4V	TGCA	2 cut(s)	404, 661
HpyF10VI	GCNNNNNNNGC	3 cut(s)	329, 444, 547
HpyF3I	CTNAG	1 cut(s)	6
HpySE526I	ACGT	1 cut(s)	396
Hsp92I	GRCGYC	2 cut(s)	396, 438
Hsp92II	CATG	5 cut(s)	470, 592, 598, 760, 772
Kzo9I	GATC	5 cut(s)	11, 237, 342, 630, 637
LmnI	GCTCC	3 cut(s)	218, 429, 706
LpnPI	CCDG	5 cut(s)	286, 326, 431, 503, 630
Lsp1109I	GCAGC	2 cut(s)	222, 433
LweI	GCATC	1 cut(s)	413
MaeII	ACGT	1 cut(s)	396
MaeIII	GTNAC	1 cut(s)	663
MalI	GATC	5 cut(s)	13, 239, 344, 632, 639
MbiI	CCGCTC	2 cut(s)	143, 335
MboI	GATC	5 cut(s)	11, 237, 342, 630, 637
MboII	GAAGA	2 cut(s)	455, 501
MluCI	AATT	3 cut(s)	36, 223, 567
MlyI	GAGTC	1 cut(s)	236
MmeI	TCCRAC	4 cut(s)	100, 126, 223, 240
MroXI	GAANNNNTTC	1 cut(s)	454
MseI	TTAA	2 cut(s)	167, 227
MslI	CAYNNNNRTG	2 cut(s)	557, 593
MspI	CCGG	2 cut(s)	273, 617
Mva1269I	GAATGC	1 cut(s)	303
MwoI	GCNNNNNNNGC	3 cut(s)	329, 444, 547
NdeII	GATC	5 cut(s)	11, 237, 342, 630, 637
NlaIII	CATG	5 cut(s)	470, 592, 598, 760, 772
NmeAIII	GCCGAG	2 cut(s)	392, 502
NspI	RCATGY	2 cut(s)	592, 760
OliI	CACNNNNGTG	1 cut(s)	557
PagI	TCATGA	2 cut(s)	466, 594
PceI	AGGCCT	1 cut(s)	730
PciI	ACATGT	2 cut(s)	588, 756
PcsI	WCGNNNNNNNCGW	1 cut(s)	396
PctI	GAATGC	1 cut(s)	303
PdmI	GAANNNNTTC	1 cut(s)	454
PfeI	GAWTC	4 cut(s)	269, 354, 380, 506
PflFI	GACNNNGTC	1 cut(s)	499
PkrI	GCNGC	3 cut(s)	212, 334, 423
Ple19I	CGATCG	1 cut(s)	633
PleI	GAGTC	1 cut(s)	236
PpsI	GAGTC	1 cut(s)	236
PscI	ACATGT	2 cut(s)	588, 756
PspFI	CCCAGC	1 cut(s)	417
PspPI	GGNCC	3 cut(s)	415, 445, 583
PstNI	CAGNNNCTG	1 cut(s)	667
PsyI	GACNNNGTC	1 cut(s)	499
PvuI	CGATCG	1 cut(s)	633
RsaI	GTAC	3 cut(s)	485, 755, 767
RsaNI	GTAC	3 cut(s)	484, 754, 766
RseI	CAYNNNNRTG	2 cut(s)	557, 593
SaqAI	TTAA	2 cut(s)	167, 227
SatI	GCNGC	3 cut(s)	211, 333, 422
Sau3AI	GATC	5 cut(s)	11, 237, 342, 630, 637
Sau96I	GGNCC	3 cut(s)	415, 445, 583
SchI	GAGTC	1 cut(s)	236
SetI	ASST	9 cut(s)	22, 131, 173, 192, 215, 399, 426, 740, 767
SfaNI	GCATC	1 cut(s)	413
SfcI	CTRYAG	1 cut(s)	247
SinI	GGWCC	1 cut(s)	583
SmiMI	CAYNNNNRTG	2 cut(s)	557, 593
Sse9I	AATT	3 cut(s)	36, 223, 567
SseBI	AGGCCT	1 cut(s)	730
SsiI	CCGC	4 cut(s)	82, 141, 333, 369
StuI	AGGCCT	1 cut(s)	730
StyI	CCWWGG	1 cut(s)	777
TaaI	ACNGT	3 cut(s)	488, 556, 669
TaiI	ACGT	1 cut(s)	399
TaqI	TCGA	2 cut(s)	240, 341
TaqII	GACCGA	1 cut(s)	571
TasI	AATT	3 cut(s)	36, 223, 567
TatI	WGTACW	1 cut(s)	483
TauI	GCSGC	1 cut(s)	335
TfiI	GAWTC	4 cut(s)	269, 354, 380, 506
Tru1I	TTAA	2 cut(s)	167, 227
Tru9I	TTAA	2 cut(s)	167, 227
TscAI	CASTG	1 cut(s)	493
TseI	GCWGC	2 cut(s)	210, 421
TspDTI	ATGAA	3 cut(s)	346, 455, 583
TspGWI	ACGGA	1 cut(s)	246
TspRI	CASTG	1 cut(s)	493
Tth111I	GACNNNGTC	1 cut(s)	499
VpaK11BI	GGWCC	1 cut(s)	583
XapI	RAATTY	2 cut(s)	36, 223
XceI	RCATGY	2 cut(s)	592, 760
XmnI	GAANNNNTTC	1 cut(s)	454
ZraI	GACGTC	1 cut(s)	397

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.