Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0010701

Physical Location & Seq

Genomic Coordinates Reverse (-)

17056297 .. 17059278

Gene Structure 2982 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G167100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 828 bp

ATGTCAGTCAGAAAAGTAGGTGAAACTCAGCCTCAGCCTGAGGAGGGTGGTTCTGCACAAACGTCACAGTCAATCCGCATTTCCAAGTCTGCTGAAGATAGCGACAAGAAGGGCACAAACAGGAGACTTAAGGATGTCGAGATTTGTGTGCCAATAGTGTATGGGACAATCGCATTCTATCTTGGTAGGAAGGCCAGTGAGTCTCAGTCCCATAAGTGGACGGTTTATGTTCGTGGGGCAACAAACGAAGACCTTGGGGTGGTGGTAAAGCGAGTTATATTTCAATTGCATCCTAGTTTCAATAACCCTATGAGAGTGGTTGATTCACCCCCATTTGAATTAACAGAATGTGGTTGGGGTGAATTTGAAATTTCCATCAGTCTGTTCTTCCACAGTGATGTCTGTGAGAGACAGTTGGACTTGTTTCACCCTTTGAAGTTATATACTGAAGACGAATCTGGGCCCCAGTCAACCAAGAAACCTGTTGTTATGGAATCTTACAATGAATTAGTTTTCCCTGATCCTTCAGAAGCCTTTGTTGCTCGTGTGCAGAACCATCCAGCTGTTGTAGTGCCCCGTTTGCCTGCTGGTTTTAACTTGCCTAATCCTGAATCGATTGATCGCGCGAATGAAAAGGGACGAGGGGACACAAAAGATCATCCCCTTAGTCAGTGGTTCTTGAATTTTTCAGAGCCTGATGAGCTCTTAAAACTTGCAGCGGCTCGTCAGGAGGTGCAAGCCCACATTGTTAACGTGAGAAGAAAACTGAGTATGTTGGATGGAGTGCCCCAGCTGTCCAAACCACCCTCTGGATACGAATATACATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000123 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0006325 GO:0006464 GO:0006473 GO:0006475 GO:0006807 GO:0006996 GO:0008150 GO:0008152 GO:0009909 GO:0009987 GO:0016043 GO:0016569 GO:0016570 GO:0016573 GO:0018193 GO:0018205 GO:0018393 GO:0018394 GO:0019538 GO:0031248 GO:0031974 GO:0031981 GO:0032991 GO:0035267 GO:0036211 GO:0040034 GO:0043170 GO:0043189 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043412 GO:0043543 GO:0043967 GO:0043981 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0048506 GO:0048509 GO:0048510 GO:0048580 GO:0048583 GO:0048831 GO:0050789 GO:0050793 GO:0051239 GO:0051276 GO:0065007 GO:0070013 GO:0071704 GO:0071840 GO:1901564 GO:1902493 GO:1902494 GO:1902562 GO:1990234 GO:2000026 GO:2000028 GO:2000241

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

YEATS

Protein Analysis

276

Amino Acids

30.9

Weight (kDa)

5.86

Isoelectric Point (pI)

46.41

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010701)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G18000 AT2G18000
fragaria_vesca	FvH4_1g11970
malus_domestica	MD02G1133500.v1.1 MD02G1133700.v1.1 MD15G1246700.v1.1
prunus_persica	Prupe.7G167100_v2.0.a1 Prupe.7G167100_v2.0.a1
pyrus_communis	pycom02g10540 pycom15g21710
rosa_chinensis	RchiOBHm_Chr2g0099591
rosa_laevigata	RLG00000016894
rosa_multiflora	Rmu_sc0005120.1_g000005
rosa_roxburghii	Rroxscaffold_2G00142950
rosa_rugosa	Rorug02G0081200 Rorug02G0081300
rosa_samantha	Rh2AG130800 Rh2BG133900 Rh2CG134700 Rh2DG135100

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	809
AccII	CGCG	2 cut(s)	624, 626
AciI	CCGC	2 cut(s)	76, 719
AclWI	GGATC	1 cut(s)	515
AcsI	RAATTY	3 cut(s)	362, 369, 682
AcuI	CTGAAG	3 cut(s)	114, 468, 510
AfiI	CCNNNNNNNGG	4 cut(s)	44, 216, 259, 809
AflII	CTTAAG	1 cut(s)	128
AgsI	TTSAA	6 cut(s)	284, 301, 338, 368, 436, 682
AluBI	AGCT	3 cut(s)	563, 703, 793
AluI	AGCT	3 cut(s)	563, 703, 793
Alw21I	GWGCWC	1 cut(s)	705
Alw26I	GTCTC	3 cut(s)	118, 207, 403
AlwI	GGATC	1 cut(s)	515
AlwNI	CAGNNNCTG	1 cut(s)	695
AoxI	GGCC	2 cut(s)	192, 461
ApaI	GGGCCC	1 cut(s)	465
ApeKI	GCWGC	1 cut(s)	716
ApoI	RAATTY	3 cut(s)	362, 369, 682
AspLEI	GCGC	1 cut(s)	626
AspS9I	GGNCC	2 cut(s)	461, 462
AsuHPI	GGTGA	4 cut(s)	32, 318, 371, 419
AxyI	CCTNAGG	1 cut(s)	39
BaeGI	GKGCMC	4 cut(s)	116, 465, 576, 789
BanII	GRGCYC	2 cut(s)	465, 705
BauI	CACGAG	1 cut(s)	543
BbsI	GAAGAC	2 cut(s)	255, 456
Bbv12I	GWGCWC	1 cut(s)	705
BbvCI	CCTCAGC	1 cut(s)	33
BbvI	GCAGC	1 cut(s)	728
BccI	CCATC	3 cut(s)	383, 564, 773
BciVI	GTATCC	1 cut(s)	806
BcoDI	GTCTC	3 cut(s)	118, 207, 403
BfaI	CTAG	1 cut(s)	294
BfrI	CTTAAG	1 cut(s)	128
BfuI	GTATCC	1 cut(s)	806
BisI	GCNGC	2 cut(s)	717, 720
BlsI	GCNGC	2 cut(s)	718, 721
BmgT120I	GGNCC	2 cut(s)	461, 462
BmiI	GGNNCC	2 cut(s)	463, 464
BmrI	ACTGGG	1 cut(s)	460
BmsI	GCATC	1 cut(s)	298
BmuI	ACTGGG	1 cut(s)	460
BpiI	GAAGAC	2 cut(s)	255, 456
Bpu10I	CCTNAGC	1 cut(s)	33
Bsa29I	ATCGAT	1 cut(s)	614
BsaJI	CCNNGG	1 cut(s)	253
Bsc4I	CCNNNNNNNGG	4 cut(s)	44, 216, 259, 809
Bse1I	ACTGG	2 cut(s)	195, 466
Bse21I	CCTNAGG	1 cut(s)	39
BseCI	ATCGAT	1 cut(s)	614
BseDI	CCNNGG	1 cut(s)	253
BseGI	GGATG	5 cut(s)	139, 289, 556, 658, 784
BseLI	CCNNNNNNNGG	4 cut(s)	44, 216, 259, 809
BseMII	CTCAG	5 cut(s)	30, 41, 47, 218, 758
BseNI	ACTGG	2 cut(s)	195, 466
BseRI	GAGGAG	1 cut(s)	56
BseSI	GKGCMC	4 cut(s)	116, 465, 576, 789
BseXI	GCAGC	1 cut(s)	728
BseYI	CCCAGC	1 cut(s)	789
BsgI	GTGCAG	2 cut(s)	39, 569
Bsh1236I	CGCG	2 cut(s)	624, 626
BshFI	GGCC	2 cut(s)	194, 463
BshVI	ATCGAT	1 cut(s)	614
BsiHKAI	GWGCWC	1 cut(s)	705
BslFI	GGGAC	4 cut(s)	178, 193, 651, 659
BslI	CCNNNNNNNGG	4 cut(s)	44, 216, 259, 809
BsmAI	GTCTC	3 cut(s)	118, 207, 403
BsmFI	GGGAC	4 cut(s)	178, 193, 651, 659
BsmI	GAATGC	1 cut(s)	173
BsnI	GGCC	2 cut(s)	194, 463
Bsp120I	GGGCCC	1 cut(s)	461
Bsp1286I	GDGCHC	5 cut(s)	116, 465, 576, 705, 789
Bsp143I	GATC	3 cut(s)	520, 619, 655
BspACI	CCGC	2 cut(s)	76, 719
BspANI	GGCC	2 cut(s)	194, 463
BspCNI	CTCAG	5 cut(s)	31, 40, 46, 217, 759
BspDI	ATCGAT	1 cut(s)	614
BspFNI	CGCG	2 cut(s)	624, 626
BspLI	GGNNCC	2 cut(s)	463, 464
BspPI	GGATC	1 cut(s)	515
BspTI	CTTAAG	1 cut(s)	128
BsrI	ACTGG	2 cut(s)	195, 466
BssECI	CCNNGG	1 cut(s)	253
BssMI	GATC	3 cut(s)	520, 619, 655
BssSI	CACGAG	1 cut(s)	543
BssT1I	CCWWGG	1 cut(s)	253
Bst2BI	CACGAG	1 cut(s)	543
Bst4CI	ACNGT	4 cut(s)	69, 223, 395, 414
BstAFI	CTTAAG	1 cut(s)	128
BstC8I	GCNNGC	2 cut(s)	585, 738
BstDEI	CTNAG	6 cut(s)	27, 33, 39, 204, 665, 767
BstF5I	GGATG	5 cut(s)	139, 289, 556, 658, 784
BstFNI	CGCG	2 cut(s)	624, 626
BstHHI	GCGC	1 cut(s)	626
BstKTI	GATC	3 cut(s)	523, 622, 658
BstMAI	GTCTC	3 cut(s)	118, 207, 403
BstMBI	GATC	3 cut(s)	520, 619, 655
BstMWI	GCNNNNNNNGC	3 cut(s)	539, 580, 700
BstSLI	GKGCMC	4 cut(s)	116, 465, 576, 789
BstUI	CGCG	2 cut(s)	624, 626
BstV1I	GCAGC	1 cut(s)	728
BstV2I	GAAGAC	2 cut(s)	255, 456
Bsu15I	ATCGAT	1 cut(s)	614
Bsu36I	CCTNAGG	1 cut(s)	39
BsuI	GTATCC	1 cut(s)	806
BsuRI	GGCC	2 cut(s)	194, 463
BsuTUI	ATCGAT	1 cut(s)	614
BtsCI	GGATG	5 cut(s)	139, 289, 556, 658, 784
BtsIMutI	CAGTG	3 cut(s)	202, 400, 677
Cac8I	GCNNGC	2 cut(s)	585, 738
CaiI	CAGNNNCTG	1 cut(s)	695
CfoI	GCGC	1 cut(s)	626
Cfr13I	GGNCC	2 cut(s)	461, 462
ClaI	ATCGAT	1 cut(s)	614
CviAII	CATG	1 cut(s)	825
DdeI	CTNAG	6 cut(s)	27, 33, 39, 204, 665, 767
DpnI	GATC	3 cut(s)	522, 621, 657
DpnII	GATC	3 cut(s)	520, 619, 655
Ecl136II	GAGCTC	1 cut(s)	703
Eco130I	CCWWGG	1 cut(s)	253
Eco24I	GRGCYC	2 cut(s)	465, 705
Eco53kI	GAGCTC	1 cut(s)	703
Eco57I	CTGAAG	3 cut(s)	114, 468, 510
Eco81I	CCTNAGG	1 cut(s)	39
EcoICRI	GAGCTC	1 cut(s)	703
EcoO109I	RGGNCCY	1 cut(s)	462
EcoT14I	CCWWGG	1 cut(s)	253
EcoT38I	GRGCYC	2 cut(s)	465, 705
ErhI	CCWWGG	1 cut(s)	253
FaeI	CATG	1 cut(s)	828
FaqI	GGGAC	4 cut(s)	178, 193, 651, 659
FatI	CATG	1 cut(s)	824
Fnu4HI	GCNGC	2 cut(s)	717, 720
FokI	GGATG	5 cut(s)	146, 276, 543, 645, 791
FriOI	GRGCYC	2 cut(s)	465, 705
Fsp4HI	GCNGC	2 cut(s)	717, 720
FspBI	CTAG	1 cut(s)	294
GlaI	GCGC	1 cut(s)	625
GluI	GCNGC	2 cut(s)	717, 720
GsaI	CCCAGC	1 cut(s)	793
HaeIII	GGCC	2 cut(s)	194, 463
HhaI	GCGC	1 cut(s)	626
Hin1II	CATG	1 cut(s)	828
Hin6I	GCGC	1 cut(s)	624
HinP1I	GCGC	1 cut(s)	624
HincII	GTYRAC	2 cut(s)	471, 751
HindII	GTYRAC	2 cut(s)	471, 751
HinfI	GANTC	5 cut(s)	200, 323, 455, 494, 611
HpaI	GTTAAC	1 cut(s)	751
HphI	GGTGA	4 cut(s)	32, 318, 371, 419
Hpy166II	GTNNAC	3 cut(s)	219, 471, 751
Hpy188I	TCNGA	3 cut(s)	11, 529, 691
Hpy188III	TCNNGA	5 cut(s)	139, 608, 679, 728, 810
Hpy8I	GTNNAC	3 cut(s)	219, 471, 751
HpyAV	CCTTC	3 cut(s)	103, 184, 534
HpyCH4III	ACNGT	4 cut(s)	69, 223, 395, 414
HpyCH4IV	ACGT	2 cut(s)	62, 753
HpyCH4V	TGCA	5 cut(s)	56, 289, 550, 716, 736
HpyF10VI	GCNNNNNNNGC	3 cut(s)	539, 580, 700
HpyF3I	CTNAG	6 cut(s)	27, 33, 39, 204, 665, 767
HpySE526I	ACGT	2 cut(s)	62, 753
Hsp92II	CATG	1 cut(s)	828
HspAI	GCGC	1 cut(s)	624
KspAI	GTTAAC	1 cut(s)	751
Kzo9I	GATC	3 cut(s)	520, 619, 655
Lsp1109I	GCAGC	1 cut(s)	728
LweI	GCATC	1 cut(s)	298
MaeI	CTAG	1 cut(s)	294
MaeII	ACGT	2 cut(s)	62, 753
MaeIII	GTNAC	1 cut(s)	63
MalI	GATC	3 cut(s)	522, 621, 657
MboI	GATC	3 cut(s)	520, 619, 655
MboII	GAAGA	5 cut(s)	107, 260, 379, 461, 771
MfeI	CAATTG	1 cut(s)	284
MhlI	GDGCHC	5 cut(s)	116, 465, 576, 705, 789
MluCI	AATT	6 cut(s)	284, 338, 362, 369, 506, 682
MlyI	GAGTC	1 cut(s)	209
MmeI	TCCRAC	2 cut(s)	396, 756
MnlI	CCTC	6 cut(s)	34, 37, 42, 635, 724, 817
MseI	TTAA	5 cut(s)	129, 341, 594, 707, 750
MslI	CAYNNNNRTG	1 cut(s)	396
MspA1I	CMGCKG	3 cut(s)	563, 719, 793
MspCI	CTTAAG	1 cut(s)	128
MunI	CAATTG	1 cut(s)	284
Mva1269I	GAATGC	1 cut(s)	173
MvnI	CGCG	2 cut(s)	624, 626
MwoI	GCNNNNNNNGC	3 cut(s)	539, 580, 700
NdeII	GATC	3 cut(s)	520, 619, 655
NlaIII	CATG	1 cut(s)	828
NlaIV	GGNNCC	2 cut(s)	463, 464
NmuCI	GTSAC	1 cut(s)	63
PctI	GAATGC	1 cut(s)	173
PfeI	GAWTC	4 cut(s)	323, 455, 494, 611
PflMI	CCANNNNNTGG	1 cut(s)	809
PkrI	GCNGC	2 cut(s)	718, 721
PleI	GAGTC	1 cut(s)	208
PpsI	GAGTC	1 cut(s)	208
Psp124BI	GAGCTC	1 cut(s)	705
PspFI	CCCAGC	1 cut(s)	789
PspN4I	GGNNCC	2 cut(s)	463, 464
PspOMI	GGGCCC	1 cut(s)	461
PspPI	GGNCC	2 cut(s)	461, 462
PstNI	CAGNNNCTG	1 cut(s)	695
PvuII	CAGCTG	2 cut(s)	563, 793
RseI	CAYNNNNRTG	1 cut(s)	396
SacI	GAGCTC	1 cut(s)	705
SaqAI	TTAA	5 cut(s)	129, 341, 594, 707, 750
SatI	GCNGC	2 cut(s)	717, 720
Sau3AI	GATC	3 cut(s)	520, 619, 655
Sau96I	GGNCC	2 cut(s)	461, 462
SchI	GAGTC	1 cut(s)	209
SduI	GDGCHC	5 cut(s)	116, 465, 576, 705, 789
SetI	ASST	9 cut(s)	22, 65, 255, 484, 565, 705, 735, 756, 795
SfaNI	GCATC	1 cut(s)	298
SmiMI	CAYNNNNRTG	1 cut(s)	396
SmlI	CTYRAG	1 cut(s)	128
SmoI	CTYRAG	1 cut(s)	128
Sse9I	AATT	6 cut(s)	284, 338, 362, 369, 506, 682
SsiI	CCGC	2 cut(s)	76, 719
SspMI	CTAG	1 cut(s)	294
SstI	GAGCTC	1 cut(s)	705
StyI	CCWWGG	1 cut(s)	253
TaaI	ACNGT	4 cut(s)	69, 223, 395, 414
TaiI	ACGT	2 cut(s)	65, 756
TaqI	TCGA	2 cut(s)	138, 614
TasI	AATT	6 cut(s)	284, 338, 362, 369, 506, 682
TauI	GCSGC	1 cut(s)	722
TfiI	GAWTC	4 cut(s)	323, 455, 494, 611
Tru1I	TTAA	5 cut(s)	129, 341, 594, 707, 750
Tru9I	TTAA	5 cut(s)	129, 341, 594, 707, 750
TscAI	CASTG	3 cut(s)	202, 400, 677
TseFI	GTSAC	1 cut(s)	63
TseI	GCWGC	1 cut(s)	716
Tsp45I	GTSAC	1 cut(s)	63
TspDTI	ATGAA	2 cut(s)	519, 645
TspRI	CASTG	3 cut(s)	202, 400, 677
Van91I	CCANNNNNTGG	1 cut(s)	809
Vha464I	CTTAAG	1 cut(s)	128
XapI	RAATTY	3 cut(s)	362, 369, 682
XspI	CTAG	1 cut(s)	294

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.