Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0008807

Physical Location & Seq

Genomic Coordinates Reverse (-)

17341687 .. 17344578

Gene Structure 2892 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G172500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 798 bp

ATGGGAAAAGTGTCTCCAAAAGAAAGGAATTCGAAGAAGGCCAAACAGAAAAAGCGACGAGGCTCAGGTAACAAGTATCTGAAGCCGGGTGCTCTTGCTCAGCTTAAGCATAGCAAGACCTCTTCAGCTAAGTCGTGCACCGATCTTGGCAGGAAGCGGGTGGCTGTCTTGGAGACCAAGAAGGTTAAGGGCGATATGGTGCTTGAAGACAGGGCTATTGATAAAAGCCCTTTGATGTTGTCGCCTGTGAATTTGGTTAGACAGAATAGTTTGTTGAAAACTCCAAAGACCCCTCGAACTGAAGATTGCGTGTCGGAGTCCCGGCTTGAATCTCTCCCCATGGATTTGCTGGTTAAAGTATTGTGTCACTTGCACCATGACCAACTGAAGGCAGTTTTTCATGTCTCTCAACGAGTTAGAAAAGCTGTTTTACTTGCAAGGCAGTTCTATTTTAATTATACAACTCCAGATCGCTCTAGACAGGAGATGTTAAATACAATGACACCCCATCCGACAGAGCACTGGCCTTTTTTAAGCAAGGGAGATGGGAAAGGCATATTCATTCGAAGCCCCCATACTCCAAAAGCACCAAGGCATGGTCCCCGACCACCATCTCGCCTCAAAGTCTCGGAAATGCGGCAGGTTGCAGCAGTTCTCTTCCAGGAGTCAAACTTCCCTACAAGATGCATGGTCCCTTCTGTCTTACCAAAGCCCCTCTGCAAATCATTGGCTTCAAATAGAGTTTTGTTCTATGAGGACGAATTATGTCAGGCTGTTGCTCAGAATAAACTTCTTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

266

Amino Acids

29.99

Weight (kDa)

10.24

Isoelectric Point (pI)

45.66

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0008807)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G35930 AT4G35930 AT4G35930 AT4G35930
fragaria_vesca	FvH4_1g11320 FvH4_1g11320
malus_domestica	MD02G1127300.v1.1 MD15G1241500.v1.1
prunus_persica	Prupe.6G141800_v2.0.a1 Prupe.7G172500_v2.0.a1
pyrus_communis	pycom02g09940 pycom15g21300
rosa_chinensis	RchiOBHm_Chr2g0098831
rosa_laevigata	RLG00000016829
rosa_multiflora	Rmu_sc0008564.1_g000002
rosa_roxburghii	Rroxscaffold_2G00143690
rosa_rugosa	Rorug02G0074900
rosa_samantha	Rh1BG014500 Rh2AG122900 Rh2BG126400 Rh2CG127400 Rh2DG128500
rosa_wichuraiana	Rw0G004280

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	631
AccB7I	CCANNNNNTGG	1 cut(s)	596
AciI	CCGC	2 cut(s)	157, 637
AcsI	RAATTY	2 cut(s)	28, 250
AcuI	CTGAAG	4 cut(s)	101, 108, 321, 407
AfiI	CCNNNNNNNGG	2 cut(s)	388, 596
AflII	CTTAAG	1 cut(s)	104
AgsI	TTSAA	4 cut(s)	206, 277, 329, 735
AjnI	CCWGG	1 cut(s)	660
AluBI	AGCT	3 cut(s)	103, 128, 425
AluI	AGCT	3 cut(s)	103, 128, 425
Alw21I	GWGCWC	3 cut(s)	94, 140, 522
Alw26I	GTCTC	4 cut(s)	18, 167, 409, 631
Alw44I	GTGCAC	1 cut(s)	136
AoxI	GGCC	2 cut(s)	39, 524
ApaLI	GTGCAC	1 cut(s)	136
ApeKI	GCWGC	1 cut(s)	647
ApoI	RAATTY	2 cut(s)	28, 250
AspS9I	GGNCC	2 cut(s)	599, 691
AsuC2I	CCSGG	2 cut(s)	87, 322
AsuII	TTCGAA	2 cut(s)	32, 565
AvaII	GGWCC	2 cut(s)	599, 691
BaeGI	GKGCMC	1 cut(s)	140
BarI	GAAGNNNNNNTAC	2 cut(s)	559, 591
BbsI	GAAGAC	1 cut(s)	213
Bbv12I	GWGCWC	3 cut(s)	94, 140, 522
BbvI	GCAGC	1 cut(s)	659
BccI	CCATC	3 cut(s)	516, 539, 619
BciT130I	CCWGG	1 cut(s)	662
BcnI	CCSGG	2 cut(s)	87, 322
BcoDI	GTCTC	4 cut(s)	18, 167, 409, 631
BfaI	CTAG	1 cut(s)	477
BfrI	CTTAAG	1 cut(s)	104
BfuAI	ACCTGC	1 cut(s)	631
BisI	GCNGC	2 cut(s)	638, 648
BlpI	GCTNAGC	1 cut(s)	99
BlsI	GCNGC	2 cut(s)	639, 649
Bme1390I	CCNGG	3 cut(s)	87, 322, 662
Bme18I	GGWCC	2 cut(s)	599, 691
BmgT120I	GGNCC	2 cut(s)	599, 691
BmiI	GGNNCC	2 cut(s)	601, 693
BmrFI	CCNGG	3 cut(s)	87, 322, 662
BmsI	GCATC	1 cut(s)	674
BpiI	GAAGAC	1 cut(s)	213
BpmI	CTGGAG	1 cut(s)	450
Bpu10I	CCTNAGC	1 cut(s)	64
Bpu1102I	GCTNAGC	1 cut(s)	99
Bpu14I	TTCGAA	2 cut(s)	32, 565
BpuMI	CCSGG	2 cut(s)	87, 322
BsaI	GGTCTC	1 cut(s)	167
BsaJI	CCNNGG	2 cut(s)	339, 590
Bsc4I	CCNNNNNNNGG	2 cut(s)	388, 596
Bse1I	ACTGG	1 cut(s)	527
BseBI	CCWGG	1 cut(s)	662
BseDI	CCNNGG	2 cut(s)	339, 590
BseGI	GGATG	1 cut(s)	508
BseLI	CCNNNNNNNGG	2 cut(s)	388, 596
BseMII	CTCAG	3 cut(s)	78, 113, 794
BseNI	ACTGG	1 cut(s)	527
BseSI	GKGCMC	1 cut(s)	140
BseXI	GCAGC	1 cut(s)	659
BshFI	GGCC	2 cut(s)	41, 526
BsiHKAI	GWGCWC	3 cut(s)	94, 140, 522
BsiSI	CCGG	2 cut(s)	86, 322
BslFI	GGGAC	3 cut(s)	304, 585, 677
BslI	CCNNNNNNNGG	2 cut(s)	388, 596
BsmAI	GTCTC	4 cut(s)	18, 167, 409, 631
BsmFI	GGGAC	3 cut(s)	304, 585, 677
BsnI	GGCC	2 cut(s)	41, 526
Bso31I	GGTCTC	1 cut(s)	167
Bsp119I	TTCGAA	2 cut(s)	32, 565
Bsp1286I	GDGCHC	3 cut(s)	94, 140, 522
Bsp143I	GATC	2 cut(s)	142, 469
Bsp1720I	GCTNAGC	1 cut(s)	99
Bsp19I	CCATGG	1 cut(s)	339
BspACI	CCGC	2 cut(s)	157, 637
BspANI	GGCC	2 cut(s)	41, 526
BspCNI	CTCAG	3 cut(s)	77, 112, 793
BspLI	GGNNCC	2 cut(s)	601, 693
BspMI	ACCTGC	1 cut(s)	631
BspT104I	TTCGAA	2 cut(s)	32, 565
BspTI	CTTAAG	1 cut(s)	104
BspTNI	GGTCTC	1 cut(s)	167
BsrI	ACTGG	1 cut(s)	527
BssECI	CCNNGG	2 cut(s)	339, 590
BssMI	GATC	2 cut(s)	142, 469
BssT1I	CCWWGG	2 cut(s)	339, 590
Bst2UI	CCWGG	1 cut(s)	662
Bst6I	CTCTTC	2 cut(s)	127, 662
BstAFI	CTTAAG	1 cut(s)	104
BstBI	TTCGAA	2 cut(s)	32, 565
BstDEI	CTNAG	4 cut(s)	64, 99, 129, 780
BstDSI	CCRYGG	1 cut(s)	339
BstF5I	GGATG	1 cut(s)	508
BstKTI	GATC	2 cut(s)	145, 472
BstMAI	GTCTC	4 cut(s)	18, 167, 409, 631
BstMBI	GATC	2 cut(s)	142, 469
BstNI	CCWGG	1 cut(s)	662
BstSCI	CCNGG	3 cut(s)	85, 320, 660
BstSLI	GKGCMC	1 cut(s)	140
BstV1I	GCAGC	1 cut(s)	659
BstV2I	GAAGAC	1 cut(s)	213
BsuRI	GGCC	2 cut(s)	41, 526
BtgI	CCRYGG	1 cut(s)	339
BtsCI	GGATG	1 cut(s)	508
BtsIMutI	CAGTG	1 cut(s)	520
BveI	ACCTGC	1 cut(s)	631
Cfr13I	GGNCC	2 cut(s)	599, 691
CviAII	CATG	5 cut(s)	340, 377, 401, 596, 688
DdeI	CTNAG	4 cut(s)	64, 99, 129, 780
DpnI	GATC	2 cut(s)	144, 471
DpnII	GATC	2 cut(s)	142, 469
Eam1104I	CTCTTC	2 cut(s)	127, 662
EarI	CTCTTC	2 cut(s)	127, 662
Eco130I	CCWWGG	2 cut(s)	339, 590
Eco31I	GGTCTC	1 cut(s)	167
Eco47I	GGWCC	2 cut(s)	599, 691
Eco57I	CTGAAG	4 cut(s)	101, 108, 321, 407
EcoRI	GAATTC	1 cut(s)	28
EcoRII	CCWGG	1 cut(s)	660
EcoT14I	CCWWGG	2 cut(s)	339, 590
EcoT22I	ATGCAT	1 cut(s)	689
ErhI	CCWWGG	2 cut(s)	339, 590
FaeI	CATG	5 cut(s)	343, 380, 404, 599, 691
FaqI	GGGAC	3 cut(s)	304, 585, 677
FatI	CATG	5 cut(s)	339, 376, 400, 595, 687
FauI	CCCGC	1 cut(s)	150
Fnu4HI	GCNGC	2 cut(s)	638, 648
FokI	GGATG	1 cut(s)	495
Fsp4HI	GCNGC	2 cut(s)	638, 648
FspBI	CTAG	1 cut(s)	477
GluI	GCNGC	2 cut(s)	638, 648
GsuI	CTGGAG	1 cut(s)	450
HaeIII	GGCC	2 cut(s)	41, 526
HapII	CCGG	2 cut(s)	86, 322
Hin1II	CATG	5 cut(s)	343, 380, 404, 599, 691
HinfI	GANTC	3 cut(s)	317, 329, 665
HpaII	CCGG	2 cut(s)	86, 322
Hpy166II	GTNNAC	1 cut(s)	138
Hpy188I	TCNGA	5 cut(s)	81, 316, 513, 631, 783
Hpy188III	TCNNGA	2 cut(s)	467, 477
Hpy8I	GTNNAC	1 cut(s)	138
Hpy99I	CGWCG	1 cut(s)	60
HpyAV	CCTTC	4 cut(s)	31, 175, 382, 705
HpyCH4V	TGCA	6 cut(s)	138, 373, 437, 647, 687, 720
HpyF3I	CTNAG	4 cut(s)	64, 99, 129, 780
Hsp92II	CATG	5 cut(s)	343, 380, 404, 599, 691
Kzo9I	GATC	2 cut(s)	142, 469
Lsp1109I	GCAGC	1 cut(s)	659
LweI	GCATC	1 cut(s)	674
MaeI	CTAG	1 cut(s)	477
MaeIII	GTNAC	2 cut(s)	68, 365
MalI	GATC	2 cut(s)	144, 471
MboI	GATC	2 cut(s)	142, 469
MboII	GAAGA	5 cut(s)	46, 114, 218, 314, 649
MhlI	GDGCHC	3 cut(s)	94, 140, 522
MluCI	AATT	4 cut(s)	28, 250, 454, 761
MlyI	GAGTC	2 cut(s)	326, 674
MmeI	TCCRAC	2 cut(s)	294, 536
MnlI	CCTC	6 cut(s)	53, 130, 303, 629, 725, 748
Mph1103I	ATGCAT	1 cut(s)	689
MseI	TTAA	7 cut(s)	105, 186, 354, 453, 491, 533, 796
MspCI	CTTAAG	1 cut(s)	104
MspI	CCGG	2 cut(s)	86, 322
MspR9I	CCNGG	3 cut(s)	87, 322, 662
MvaI	CCWGG	1 cut(s)	662
NciI	CCSGG	2 cut(s)	87, 322
NcoI	CCATGG	1 cut(s)	339
NdeII	GATC	2 cut(s)	142, 469
NlaIII	CATG	5 cut(s)	343, 380, 404, 599, 691
NlaIV	GGNNCC	2 cut(s)	601, 693
NmuCI	GTSAC	1 cut(s)	365
NsiI	ATGCAT	1 cut(s)	689
NspV	TTCGAA	2 cut(s)	32, 565
PfeI	GAWTC	1 cut(s)	329
PflMI	CCANNNNNTGG	1 cut(s)	596
PfoI	TCCNGGA	1 cut(s)	660
PkrI	GCNGC	2 cut(s)	639, 649
PleI	GAGTC	2 cut(s)	325, 673
PpsI	GAGTC	2 cut(s)	325, 673
Psp6I	CCWGG	1 cut(s)	660
PspGI	CCWGG	1 cut(s)	660
PspN4I	GGNNCC	2 cut(s)	601, 693
PspPI	GGNCC	2 cut(s)	599, 691
SaqAI	TTAA	7 cut(s)	105, 186, 354, 453, 491, 533, 796
SatI	GCNGC	2 cut(s)	638, 648
Sau3AI	GATC	2 cut(s)	142, 469
Sau96I	GGNCC	2 cut(s)	599, 691
SchI	GAGTC	2 cut(s)	326, 674
ScrFI	CCNGG	3 cut(s)	87, 322, 662
SduI	GDGCHC	3 cut(s)	94, 140, 522
SetI	ASST	7 cut(s)	70, 105, 122, 130, 186, 427, 645
SfaNI	GCATC	1 cut(s)	674
SfuI	TTCGAA	2 cut(s)	32, 565
SinI	GGWCC	2 cut(s)	599, 691
SmlI	CTYRAG	1 cut(s)	104
SmoI	CTYRAG	1 cut(s)	104
Sse9I	AATT	4 cut(s)	28, 250, 454, 761
SsiI	CCGC	2 cut(s)	157, 637
SspMI	CTAG	1 cut(s)	477
StyD4I	CCNGG	3 cut(s)	85, 320, 660
StyI	CCWWGG	2 cut(s)	339, 590
TaqI	TCGA	3 cut(s)	32, 295, 565
TasI	AATT	4 cut(s)	28, 250, 454, 761
TauI	GCSGC	1 cut(s)	640
TfiI	GAWTC	1 cut(s)	329
Tru1I	TTAA	7 cut(s)	105, 186, 354, 453, 491, 533, 796
Tru9I	TTAA	7 cut(s)	105, 186, 354, 453, 491, 533, 796
TscAI	CASTG	1 cut(s)	527
TseFI	GTSAC	1 cut(s)	365
TseI	GCWGC	1 cut(s)	647
Tsp45I	GTSAC	1 cut(s)	365
TspDTI	ATGAA	2 cut(s)	389, 550
TspRI	CASTG	1 cut(s)	527
Van91I	CCANNNNNTGG	1 cut(s)	596
Vha464I	CTTAAG	1 cut(s)	104
VneI	GTGCAC	1 cut(s)	136
VpaK11BI	GGWCC	2 cut(s)	599, 691
XapI	RAATTY	2 cut(s)	28, 250
XbaI	TCTAGA	1 cut(s)	476
XcmI	CCANNNNNNNNNTGG	1 cut(s)	346
XspI	CTAG	1 cut(s)	477
Zsp2I	ATGCAT	1 cut(s)	689

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.