Prupe.7G210500_v2.0.a1

Cytochrome b561 and DOMON domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
OG0013370
Physical Location & Seq
Forward (+)
19260608 .. 19261815
1208 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.7G210500.1

Sequence Viewer

Length: 876 bp
CTTTTGCTAAAGACATTTATCCTTTCTTTGTATTGTCCTAATTCTCTCTCTCTCTCTCCAATGGCTTCCTCTCTTCTTCTTCTTGTGTCAGTTTCATGGTTCTCTTCCTTCCTGGCTCTGCTAGTCTCCCCCGCACAAGCAGCCACCTGCACCTCACAGACATTCAATAACAACAAGCTCTACTCCAACTGCACCGACCTCCCCGTCCTCAACTCCTACCTCCACTGGACCTACGATACCTCCGACTCCTCTCTGTCTATCGCCTTCATCTCTACACCCTCCCAATCTGACGGCTGGGTAGCGTGGGGCATCAACCCCACCTCCACCAAGATGGCTGGAGCACAGATACTCTTGGCCTACAACACAGATGGTGGGATCCCAACCGTCAAAACCTTCAACATCAGCTCATACACCTCCGTGGTACCGGGAAAACTCTCATTTGATATCTGGGACATCAGCTCCGAGTTCTCCAACGGAACGTTCAAGATCTTCGCCGCCGTTAAGGTTCCCAAAAACAAGAAGTCTGTGAACCAAGTCTGGCAGGTGGGCCCCAGGGTCAACCAAACCTCTGGTTTCCCCGACAAACATGACATCGTCGGCCCCAACCTCGAGTCCTTTCAGACCTTGTACTTGGCAGCTAGGCCCATTACGGGCAATAGCTTTAATCCCTATAAACCTGGCACTAGCATTAATCCCTATAATCCTGGCAACTGCAGTAGTCCAAATACGGGCACTCCTTCCATTAGGCAGCTCTGCACTCCCGCTAGTGGCCGTGGTGGTGGTAGTGCAGGAGGGGCTTTGAGGATTGGGAGTGGAGGAAACGTGGTTTTGTTCTCTGTTTTGCTTTCGGTTCTTGCAGCTTTCATTGCTTTCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005623 GO:0005886 GO:0005911 GO:0009506 GO:0016020 GO:0030054 GO:0044464 GO:0055044 GO:0071944
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Cytochrom_B561 DUF568

Protein Analysis

292

Amino Acids

30.93

Weight (kDa)

9.09

Isoelectric Point (pI)

33.8

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0013370)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G07390 AT3G07390
fragaria_vesca FvH4_2g18001
malus_domestica MD05G1164300.v1.1 MD10G1153800.v1.1
prunus_persica Prupe.7G210500_v2.0.a1 Prupe.8G192600_v2.0.a1 Prupe.8G192700_v2.0.a1
rosa_chinensis RchiOBHm_Chr6g0283381
rosa_laevigata RLG00000012831
rosa_multiflora Rmu_sc0003166.1_g000009
rosa_roxburghii Rroxscaffold_7G00185570
rosa_rugosa Rorug06G0153500
rosa_samantha Rh6AG266000 Rh6BG268600 Rh6CG268300 Rh6DG261800
rosa_wichuraiana Rw6G023020

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 155, 532
AasI GACNNNNNNGTC 1 cut(s) 203
Acc36I ACCTGC 2 cut(s) 155, 532
Acc65I GGTACC 1 cut(s) 421
AccB1I GGYRCC 1 cut(s) 421
AciI CCGC 3 cut(s) 132, 495, 762
AclI AACGTT 1 cut(s) 479
AclWI GGATC 2 cut(s) 370, 383
AcoI YGGCCR 1 cut(s) 769
AfaI GTAC 2 cut(s) 423, 629
AfiI CCNNNNNNNGG 3 cut(s) 650, 728, 767
AgsI TTSAA 3 cut(s) 166, 397, 484
AjnI CCWGG 4 cut(s) 111, 551, 676, 703
AjuI GAANNNNNNNTTGG 2 cut(s) 464, 496
AleI CACNNNNGTG 1 cut(s) 416
AluBI AGCT 7 cut(s) 178, 405, 459, 638, 660, 751, 860
AluI AGCT 7 cut(s) 178, 405, 459, 638, 660, 751, 860
Alw21I GWGCWC 1 cut(s) 343
Alw26I GTCTC 1 cut(s) 130
AlwI GGATC 2 cut(s) 370, 383
Ama87I CYCGRG 1 cut(s) 608
AoxI GGCC 5 cut(s) 354, 547, 598, 641, 769
ApaI GGGCCC 1 cut(s) 551
ApeKI GCWGC 4 cut(s) 140, 635, 748, 857
AseI ATTAAT 1 cut(s) 690
Asp718I GGTACC 1 cut(s) 421
AspS9I GGNCC 5 cut(s) 228, 547, 548, 599, 642
AsuC2I CCSGG 1 cut(s) 426
AvaI CYCGRG 1 cut(s) 608
AvaII GGWCC 1 cut(s) 228
BaeGI GKGCMC 2 cut(s) 551, 734
BamHI GGATCC 1 cut(s) 375
BanI GGYRCC 1 cut(s) 421
BanII GRGCYC 1 cut(s) 551
Bbv12I GWGCWC 1 cut(s) 343
BbvI GCAGC 4 cut(s) 152, 647, 760, 869
BccI CCATC 2 cut(s) 325, 362
BceAI ACGGC 3 cut(s) 307, 482, 756
BciT130I CCWGG 4 cut(s) 113, 553, 678, 705
BcnI CCSGG 1 cut(s) 426
BcoDI GTCTC 1 cut(s) 130
BfaI CTAG 4 cut(s) 122, 639, 684, 765
BfmI CTRYAG 1 cut(s) 712
BfuAI ACCTGC 2 cut(s) 155, 532
BglII AGATCT 1 cut(s) 486
BisI GCNGC 5 cut(s) 141, 495, 636, 749, 858
BlsI GCNGC 5 cut(s) 142, 496, 637, 750, 859
Bme1390I CCNGG 5 cut(s) 113, 426, 553, 678, 705
Bme18I GGWCC 1 cut(s) 228
BmeT110I CYCGRG 1 cut(s) 608
BmgT120I GGNCC 5 cut(s) 228, 547, 548, 599, 642
BmiI GGNNCC 6 cut(s) 377, 423, 507, 549, 550, 601
BmrFI CCNGG 5 cut(s) 113, 426, 553, 678, 705
BmsI GCATC 1 cut(s) 318
BpmI CTGGAG 1 cut(s) 357
BpuMI CCSGG 1 cut(s) 426
BsaJI CCNNGG 4 cut(s) 417, 551, 552, 772
Bsc4I CCNNNNNNNGG 3 cut(s) 650, 728, 767
Bse1I ACTGG 1 cut(s) 230
Bse3DI GCAATG 1 cut(s) 864
BseBI CCWGG 4 cut(s) 113, 553, 678, 705
BseDI CCNNGG 4 cut(s) 417, 551, 552, 772
BseLI CCNNNNNNNGG 3 cut(s) 650, 728, 767
BseMI GCAATG 1 cut(s) 864
BseNI ACTGG 1 cut(s) 230
BseRI GAGGAG 1 cut(s) 238
BseSI GKGCMC 2 cut(s) 551, 734
BseXI GCAGC 4 cut(s) 152, 647, 760, 869
BseYI CCCAGC 1 cut(s) 294
BsgI GTGCAG 4 cut(s) 133, 175, 739, 807
BshFI GGCC 5 cut(s) 356, 549, 600, 643, 771
BshNI GGYRCC 1 cut(s) 421
BsiHKAI GWGCWC 1 cut(s) 343
BsiHKCI CYCGRG 1 cut(s) 608
BsiSI CCGG 1 cut(s) 425
BslFI GGGAC 1 cut(s) 464
BslI CCNNNNNNNGG 3 cut(s) 650, 728, 767
BsmAI GTCTC 1 cut(s) 130
BsmFI GGGAC 1 cut(s) 464
BsnI GGCC 5 cut(s) 356, 549, 600, 643, 771
BsoBI CYCGRG 1 cut(s) 608
Bsp120I GGGCCC 1 cut(s) 547
Bsp1286I GDGCHC 3 cut(s) 343, 551, 734
Bsp143I GATC 2 cut(s) 375, 486
BspACI CCGC 3 cut(s) 132, 495, 762
BspANI GGCC 5 cut(s) 356, 549, 600, 643, 771
BspLI GGNNCC 6 cut(s) 377, 423, 507, 549, 550, 601
BspMAI CTGCAG 1 cut(s) 716
BspMI ACCTGC 2 cut(s) 155, 532
BspPI GGATC 2 cut(s) 370, 383
BspT107I GGYRCC 1 cut(s) 421
BsrDI GCAATG 1 cut(s) 864
BsrI ACTGG 1 cut(s) 230
BssECI CCNNGG 4 cut(s) 417, 551, 552, 772
BssMI GATC 2 cut(s) 375, 486
Bst2UI CCWGG 4 cut(s) 113, 553, 678, 705
Bst4CI ACNGT 1 cut(s) 385
Bst6I CTCTTC 2 cut(s) 78, 109
BstDSI CCRYGG 2 cut(s) 417, 772
BstKTI GATC 2 cut(s) 378, 489
BstMAI GTCTC 1 cut(s) 130
BstMBI GATC 2 cut(s) 375, 486
BstMWI GCNNNNNNNGC 3 cut(s) 140, 794, 866
BstNI CCWGG 4 cut(s) 113, 553, 678, 705
BstSCI CCNGG 5 cut(s) 111, 424, 551, 676, 703
BstSFI CTRYAG 1 cut(s) 712
BstSLI GKGCMC 2 cut(s) 551, 734
BstV1I GCAGC 4 cut(s) 152, 647, 760, 869
BstX2I RGATCY 2 cut(s) 375, 486
BstXI CCANNNNNNTGG 2 cut(s) 331, 569
BstYI RGATCY 2 cut(s) 375, 486
BsuRI GGCC 5 cut(s) 356, 549, 600, 643, 771
BtgI CCRYGG 2 cut(s) 417, 772
BtsIMutI CAGTG 1 cut(s) 223
BveI ACCTGC 2 cut(s) 155, 532
Cfr13I GGNCC 5 cut(s) 228, 547, 548, 599, 642
Csp6I GTAC 2 cut(s) 422, 628
CviAII CATG 2 cut(s) 96, 587
CviQI GTAC 2 cut(s) 422, 628
DpnI GATC 2 cut(s) 377, 488
DpnII GATC 2 cut(s) 375, 486
DrdI GACNNNNNNGTC 1 cut(s) 203
DseDI GACNNNNNNGTC 1 cut(s) 203
EaeI YGGCCR 1 cut(s) 769
Eam1104I CTCTTC 2 cut(s) 78, 109
EarI CTCTTC 2 cut(s) 78, 109
Eco24I GRGCYC 1 cut(s) 551
Eco32I GATATC 1 cut(s) 445
Eco47I GGWCC 1 cut(s) 228
Eco88I CYCGRG 1 cut(s) 608
EcoO109I RGGNCCY 1 cut(s) 548
EcoRII CCWGG 4 cut(s) 111, 551, 676, 703
EcoRV GATATC 1 cut(s) 445
EcoT38I GRGCYC 1 cut(s) 551
FaeI CATG 2 cut(s) 99, 590
FaiI YATR 5 cut(s) 97, 409, 588, 672, 699
FaqI GGGAC 1 cut(s) 464
FatI CATG 2 cut(s) 95, 586
FauI CCCGC 2 cut(s) 139, 769
Fnu4HI GCNGC 5 cut(s) 141, 495, 636, 749, 858
FriOI GRGCYC 1 cut(s) 551
Fsp4HI GCNGC 5 cut(s) 141, 495, 636, 749, 858
FspBI CTAG 4 cut(s) 122, 639, 684, 765
GluI GCNGC 5 cut(s) 141, 495, 636, 749, 858
GsaI CCCAGC 1 cut(s) 298
GsuI CTGGAG 1 cut(s) 357
HaeIII GGCC 5 cut(s) 356, 549, 600, 643, 771
HapII CCGG 1 cut(s) 425
Hin1II CATG 2 cut(s) 99, 590
HincII GTYRAC 1 cut(s) 559
HindII GTYRAC 1 cut(s) 559
HinfI GANTC 2 cut(s) 245, 611
HpaII CCGG 1 cut(s) 425
Hpy166II GTNNAC 2 cut(s) 529, 559
Hpy188I TCNGA 4 cut(s) 244, 289, 463, 621
Hpy188III TCNNGA 1 cut(s) 484
Hpy8I GTNNAC 2 cut(s) 529, 559
Hpy99I CGWCG 1 cut(s) 599
HpyAV CCTTC 4 cut(s) 118, 274, 403, 747
HpyCH4III ACNGT 1 cut(s) 385
HpyCH4IV ACGT 2 cut(s) 479, 822
HpyCH4V TGCA 6 cut(s) 150, 192, 714, 756, 788, 857
HpyF10VI GCNNNNNNNGC 3 cut(s) 140, 794, 866
HpySE526I ACGT 2 cut(s) 479, 822
Hsp92II CATG 2 cut(s) 99, 590
KpnI GGTACC 1 cut(s) 425
Kzo9I GATC 2 cut(s) 375, 486
LmnI GCTCC 2 cut(s) 338, 464
Lsp1109I GCAGC 4 cut(s) 152, 647, 760, 869
LweI GCATC 1 cut(s) 318
MaeI CTAG 4 cut(s) 122, 639, 684, 765
MaeII ACGT 2 cut(s) 479, 822
MalI GATC 2 cut(s) 377, 488
MboI GATC 2 cut(s) 375, 486
MboII GAAGA 5 cut(s) 65, 68, 71, 96, 481
MflI RGATCY 2 cut(s) 375, 486
MhlI GDGCHC 3 cut(s) 343, 551, 734
MluCI AATT 1 cut(s) 40
MlyI GAGTC 2 cut(s) 239, 620
MmeI TCCRAC 3 cut(s) 210, 267, 495
MseI TTAA 3 cut(s) 501, 663, 690
MslI CAYNNNNRTG 2 cut(s) 329, 416
MspI CCGG 1 cut(s) 425
MspR9I CCNGG 5 cut(s) 113, 426, 553, 678, 705
MvaI CCWGG 4 cut(s) 113, 553, 678, 705
MwoI GCNNNNNNNGC 3 cut(s) 140, 794, 866
NciI CCSGG 1 cut(s) 426
NdeII GATC 2 cut(s) 375, 486
NlaIII CATG 2 cut(s) 99, 590
NlaIV GGNNCC 6 cut(s) 377, 423, 507, 549, 550, 601
OliI CACNNNNGTG 1 cut(s) 416
PaeR7I CTCGAG 1 cut(s) 608
PaqCI CACCTGC 2 cut(s) 155, 532
PasI CCCWGGG 1 cut(s) 552
PcsI WCGNNNNNNNCGW 1 cut(s) 240
PflFI GACNNNGTC 1 cut(s) 593
PkrI GCNGC 5 cut(s) 142, 496, 637, 750, 859
PleI GAGTC 2 cut(s) 239, 619
PpsI GAGTC 2 cut(s) 239, 619
PshBI ATTAAT 1 cut(s) 690
Psp1406I AACGTT 1 cut(s) 479
Psp6I CCWGG 4 cut(s) 111, 551, 676, 703
PspFI CCCAGC 1 cut(s) 294
PspGI CCWGG 4 cut(s) 111, 551, 676, 703
PspN4I GGNNCC 6 cut(s) 377, 423, 507, 549, 550, 601
PspOMI GGGCCC 1 cut(s) 547
PspPI GGNCC 5 cut(s) 228, 547, 548, 599, 642
PspXI VCTCGAGB 1 cut(s) 608
PstI CTGCAG 1 cut(s) 716
PsuI RGATCY 2 cut(s) 375, 486
PsyI GACNNNGTC 1 cut(s) 593
RsaI GTAC 2 cut(s) 423, 629
RsaNI GTAC 2 cut(s) 422, 628
RseI CAYNNNNRTG 2 cut(s) 329, 416
SaqAI TTAA 3 cut(s) 501, 663, 690
SatI GCNGC 5 cut(s) 141, 495, 636, 749, 858
Sau3AI GATC 2 cut(s) 375, 486
Sau96I GGNCC 5 cut(s) 228, 547, 548, 599, 642
SchI GAGTC 2 cut(s) 239, 620
ScrFI CCNGG 5 cut(s) 113, 426, 553, 678, 705
SduI GDGCHC 3 cut(s) 343, 551, 734
SfaNI GCATC 1 cut(s) 318
SfcI CTRYAG 1 cut(s) 712
Sfr274I CTCGAG 1 cut(s) 608
SinI GGWCC 1 cut(s) 228
SlaI CTCGAG 1 cut(s) 608
SmiMI CAYNNNNRTG 2 cut(s) 329, 416
SmlI CTYRAG 1 cut(s) 608
SmoI CTYRAG 1 cut(s) 608
Sse9I AATT 1 cut(s) 40
SsiI CCGC 3 cut(s) 132, 495, 762
SspMI CTAG 4 cut(s) 122, 639, 684, 765
StyD4I CCNGG 5 cut(s) 111, 424, 551, 676, 703
TaaI ACNGT 1 cut(s) 385
TaiI ACGT 2 cut(s) 482, 825
TaqI TCGA 1 cut(s) 609
TasI AATT 1 cut(s) 40
TatI WGTACW 1 cut(s) 627
TauI GCSGC 1 cut(s) 497
Tru1I TTAA 3 cut(s) 501, 663, 690
Tru9I TTAA 3 cut(s) 501, 663, 690
TscAI CASTG 1 cut(s) 230
TseI GCWGC 4 cut(s) 140, 635, 748, 857
TspDTI ATGAA 3 cut(s) 84, 256, 853
TspGWI ACGGA 2 cut(s) 406, 489
TspRI CASTG 1 cut(s) 230
Tth111I GACNNNGTC 1 cut(s) 593
VpaK11BI GGWCC 1 cut(s) 228
VspI ATTAAT 1 cut(s) 690
XhoI CTCGAG 1 cut(s) 608
XspI CTAG 4 cut(s) 122, 639, 684, 765
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.