Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0006695

Physical Location & Seq

Genomic Coordinates Forward (+)

19733046 .. 19735163

Gene Structure 2118 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G220100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1161 bp

ATGGGTTGCTTCAGTTCTCGCAGTTCCACATCCAAAACCTCATCTCCCATAGAACCACCACCCTATCAAATTCAAAATCAACATCAAAATGCTGCTCAGCAATACCAAGAACCCCAAAATCTCCAACAACAAGTCCTCCTGCAAATCCCAGGATGTAGAGTTCACCTCATGGATGAAGGAGAAAGTATAGAACTTGCAAACGGTGAGTTCATCCTTGAGAACATCTTGGACGAGAATATTTCTCTGGCCACCATAATCAAAGTTGGTGATGAACTTCAGTGGCCCCTGACAAAAGATGAGCCTGTTGTAAAGCTTGATGCTTTGCACTATCTCTTCTCTTTGCCCATGCATGGTGGTGATCCTCTGAGCTATGGTGTCACTTTTCCAGAGCAGTATGAAAGCAATTTGGGCTTTCTGGATTCGTTTTTGAGAGAGCACTCTTGCTTTAGTGGCTTGAGCACATCCACCAAAACTAACAAAGGTGTTGATTGGAAGGAGTATGCTCCAAGAATGGATGACTACAATAATGTGTTGGCAAAAGCAATTGCAGGAGGGACTGGCCAGATTGTCAAGGGGATCTTCATGTGTAGCAATGGTTACACCAATCAGCTTCAAAAAGGAGGGGAAGTGACATTGGCTCGTCCTGTTGAGGAGAAAAGTTATGTCAAGGAACAAGGAAGTAATAGCAGCAAAAATTCTGGTGCCAAAAAGAAGAGCGAAATCAACAAGAGCTTGAAACGTGTGAGAAAGTTGTCAAAGATGACTTCAAAGCTCAGCAAATCTATGCTTGATGGGGTTGGCATTGCGACCGGATCAGTGATGAGACCTGTGGTTAAATCCCAGGCAGGGAAGGCATTCTTTGCCATGGTTCCAGGACAGGTCCTCTTGGCTTCCCTTGATGCCGTCAATAAGATTTTGGATGCAGCTGAAGTTGCAGAGAAGCAAGCTCTTTCTGCTACCTCTGGTGCTGCTACTAGAATGGTCAGCAACAGGTTCGGGGAAAGTGCAGGGGAGGCAACTGAGGATGTGTTTGCAACAGCAGGGCATTGTGCAAACACTGCTTGGAACATCTTCAAAATAAGAAAGGCCATCAATCCAGCATCATCTGTCTCTACTGGAGTATTGAAGAATGCTGCCAAAAGCAGCAGCAGAAGTTCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Senescence

Protein Analysis

387

Amino Acids

41.7

Weight (kDa)

8.62

Isoelectric Point (pI)

43.18

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0006695)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G21600 AT3G21600 AT3G21600 AT4G15450 AT4G15450
fragaria_vesca	FvH4_1g06090 FvH4_1g06090 FvH4_1g06090 FvH4_1g06090 FvH4_1g06090 FvH4_1g06090 FvH4_1g06090 FvH4_1g06090
malus_domestica	MD02G1065400.v1.1 MD15G1196300.v1.1
prunus_persica	Prupe.7G220100_v2.0.a1
pyrus_communis	pycom02g05150
rosa_chinensis	RchiOBHm_Chr2g0091841
rosa_laevigata	RLG00000016256
rosa_multiflora	Rmu_sc0021719.1_g000002
rosa_roxburghii	Rroxscaffold_2G00149690
rosa_samantha	Rh2AG066200 Rh2BG065600 Rh2CG067000 Rh2DG065300
rosa_wichuraiana	Rw2G005450

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	701
AclWI	GGATC	3 cut(s)	353, 584, 820
AcoI	YGGCCR	2 cut(s)	246, 559
AcsI	RAATTY	2 cut(s)	69, 694
AcuI	CTGAAG	2 cut(s)	260, 948
AfiI	CCNNNNNNNGG	2 cut(s)	350, 846
AflIII	ACRYGT	1 cut(s)	739
AgsI	TTSAA	6 cut(s)	74, 614, 736, 768, 1075, 1126
AjnI	CCWGG	3 cut(s)	148, 840, 871
AloI	GAACNNNNNNTCC	2 cut(s)	144, 176
AluBI	AGCT	7 cut(s)	313, 369, 610, 732, 772, 926, 947
AluI	AGCT	7 cut(s)	313, 369, 610, 732, 772, 926, 947
Alw21I	GWGCWC	2 cut(s)	438, 461
Alw26I	GTCTC	2 cut(s)	817, 1114
AlwI	GGATC	3 cut(s)	353, 584, 820
AoxI	GGCC	4 cut(s)	246, 281, 559, 1086
ApeKI	GCWGC	7 cut(s)	92, 687, 923, 968, 1133, 1143, 1146
ApoI	RAATTY	2 cut(s)	69, 694
Asp700I	GAANNNNTTC	2 cut(s)	854, 1070
AspS9I	GGNCC	2 cut(s)	282, 880
AsuHPI	GGTGA	4 cut(s)	155, 215, 278, 368
AvaII	GGWCC	1 cut(s)	880
BalI	TGGCCA	2 cut(s)	248, 561
BanI	GGYRCC	1 cut(s)	701
Bbv12I	GWGCWC	2 cut(s)	438, 461
BbvI	GCAGC	6 cut(s)	79, 699, 935, 955, 1120, 1155
BccI	CCATC	2 cut(s)	785, 1097
BceAI	ACGGC	1 cut(s)	887
BcgI	CGANNNNNNTGC	2 cut(s)	976, 1010
BciT130I	CCWGG	3 cut(s)	150, 842, 873
BcoDI	GTCTC	2 cut(s)	817, 1114
BfaI	CTAG	1 cut(s)	975
BisI	GCNGC	7 cut(s)	93, 688, 924, 969, 1134, 1144, 1147
BlpI	GCTNAGC	2 cut(s)	96, 773
BlsI	GCNGC	7 cut(s)	94, 689, 925, 970, 1135, 1145, 1148
Bme1390I	CCNGG	3 cut(s)	150, 842, 873
Bme18I	GGWCC	1 cut(s)	880
BmgT120I	GGNCC	2 cut(s)	282, 880
BmiI	GGNNCC	3 cut(s)	284, 703, 870
BmrFI	CCNGG	3 cut(s)	150, 842, 873
BmsI	GCATC	4 cut(s)	307, 889, 910, 1109
BplI	GAGNNNNNCTC	2 cut(s)	150, 182
BpmI	CTGGAG	1 cut(s)	1137
Bpu1102I	GCTNAGC	2 cut(s)	96, 773
BpuEI	CTTGAG	2 cut(s)	236, 475
BsaI	GGTCTC	1 cut(s)	817
BsaJI	CCNNGG	3 cut(s)	148, 840, 864
BsaWI	WCCGGW	1 cut(s)	809
BsaXI	ACNNNNNCTCC	6 cut(s)	28, 58, 120, 150, 612, 642
Bsc4I	CCNNNNNNNGG	2 cut(s)	350, 846
Bse1I	ACTGG	2 cut(s)	562, 1120
Bse3DI	GCAATG	2 cut(s)	598, 801
BseBI	CCWGG	3 cut(s)	150, 842, 873
BseDI	CCNNGG	3 cut(s)	148, 840, 864
BseGI	GGATG	8 cut(s)	29, 158, 178, 210, 461, 520, 925, 1030
BseLI	CCNNNNNNNGG	2 cut(s)	350, 846
BseMI	GCAATG	2 cut(s)	598, 801
BseMII	CTCAG	4 cut(s)	110, 356, 787, 1011
BseNI	ACTGG	2 cut(s)	562, 1120
BseRI	GAGGAG	1 cut(s)	665
BseXI	GCAGC	6 cut(s)	79, 699, 935, 955, 1120, 1155
BsgI	GTGCAG	1 cut(s)	1026
Bsh1285I	CGRYCG	1 cut(s)	810
BshFI	GGCC	4 cut(s)	248, 283, 561, 1088
BshNI	GGYRCC	1 cut(s)	701
BsiEI	CGRYCG	1 cut(s)	810
BsiHKAI	GWGCWC	2 cut(s)	438, 461
BsiSI	CCGG	1 cut(s)	810
BslFI	GGGAC	1 cut(s)	568
BslI	CCNNNNNNNGG	2 cut(s)	350, 846
BsmAI	GTCTC	2 cut(s)	817, 1114
BsmFI	GGGAC	1 cut(s)	568
BsmI	GAATGC	2 cut(s)	854, 1135
BsnI	GGCC	4 cut(s)	248, 283, 561, 1088
Bso31I	GGTCTC	1 cut(s)	817
Bsp1286I	GDGCHC	2 cut(s)	438, 461
Bsp143I	GATC	3 cut(s)	358, 576, 812
Bsp1720I	GCTNAGC	2 cut(s)	96, 773
Bsp19I	CCATGG	1 cut(s)	864
BspANI	GGCC	4 cut(s)	248, 283, 561, 1088
BspCNI	CTCAG	4 cut(s)	109, 357, 786, 1012
BspLI	GGNNCC	3 cut(s)	284, 703, 870
BspPI	GGATC	3 cut(s)	353, 584, 820
BspQI	GCTCTTC	1 cut(s)	707
BspT107I	GGYRCC	1 cut(s)	701
BspTNI	GGTCTC	1 cut(s)	817
BsrDI	GCAATG	2 cut(s)	598, 801
BsrI	ACTGG	2 cut(s)	562, 1120
BssECI	CCNNGG	3 cut(s)	148, 840, 864
BssMI	GATC	3 cut(s)	358, 576, 812
BssT1I	CCWWGG	1 cut(s)	864
Bst2UI	CCWGG	3 cut(s)	150, 842, 873
Bst4CI	ACNGT	1 cut(s)	203
Bst6I	CTCTTC	2 cut(s)	338, 707
BstAPI	GCANNNNNTGC	2 cut(s)	860, 1058
BstC8I	GCNNGC	1 cut(s)	945
BstDEI	CTNAG	4 cut(s)	96, 365, 773, 1020
BstDSI	CCRYGG	1 cut(s)	864
BstF5I	GGATG	8 cut(s)	29, 158, 178, 210, 461, 520, 925, 1030
BstKTI	GATC	3 cut(s)	361, 579, 815
BstMAI	GTCTC	2 cut(s)	817, 1114
BstMBI	GATC	3 cut(s)	358, 576, 812
BstMCI	CGRYCG	1 cut(s)	810
BstMWI	GCNNNNNNNGC	8 cut(s)	408, 450, 851, 860, 932, 953, 1013, 1058
BstNI	CCWGG	3 cut(s)	150, 842, 873
BstSCI	CCNGG	3 cut(s)	148, 840, 871
BstV1I	GCAGC	6 cut(s)	79, 699, 935, 955, 1120, 1155
BstX2I	RGATCY	1 cut(s)	576
BstYI	RGATCY	1 cut(s)	576
BsuRI	GGCC	4 cut(s)	248, 283, 561, 1088
BtgI	CCRYGG	1 cut(s)	864
BtsCI	GGATG	8 cut(s)	29, 158, 178, 210, 461, 520, 925, 1030
BtsI	GCAGTG	1 cut(s)	1056
BtsIMutI	CAGTG	3 cut(s)	284, 822, 1056
Cac8I	GCNNGC	1 cut(s)	945
Cfr13I	GGNCC	2 cut(s)	282, 880
CviAII	CATG	5 cut(s)	169, 346, 350, 583, 865
DdeI	CTNAG	4 cut(s)	96, 365, 773, 1020
DpnI	GATC	3 cut(s)	360, 578, 814
DpnII	GATC	3 cut(s)	358, 576, 812
EaeI	YGGCCR	2 cut(s)	246, 559
Eam1104I	CTCTTC	2 cut(s)	338, 707
EarI	CTCTTC	2 cut(s)	338, 707
Eco130I	CCWWGG	1 cut(s)	864
Eco31I	GGTCTC	1 cut(s)	817
Eco47I	GGWCC	1 cut(s)	880
Eco57I	CTGAAG	2 cut(s)	260, 948
EcoO109I	RGGNCCY	1 cut(s)	880
EcoRII	CCWGG	3 cut(s)	148, 840, 871
EcoT14I	CCWWGG	1 cut(s)	864
EcoT22I	ATGCAT	1 cut(s)	351
ErhI	CCWWGG	1 cut(s)	864
FaeI	CATG	5 cut(s)	172, 349, 353, 586, 868
FalI	AAGNNNNNCTT	4 cut(s)	563, 595, 842, 874
FaqI	GGGAC	1 cut(s)	568
FatI	CATG	5 cut(s)	168, 345, 349, 582, 864
Fnu4HI	GCNGC	7 cut(s)	93, 688, 924, 969, 1134, 1144, 1147
FokI	GGATG	8 cut(s)	16, 165, 185, 197, 448, 527, 932, 1037
Fsp4HI	GCNGC	7 cut(s)	93, 688, 924, 969, 1134, 1144, 1147
FspBI	CTAG	1 cut(s)	975
GluI	GCNGC	7 cut(s)	93, 688, 924, 969, 1134, 1144, 1147
GsuI	CTGGAG	1 cut(s)	1137
HaeIII	GGCC	4 cut(s)	248, 283, 561, 1088
HapII	CCGG	1 cut(s)	810
Hin1II	CATG	5 cut(s)	172, 349, 353, 586, 868
HindIII	AAGCTT	1 cut(s)	311
HinfI	GANTC	1 cut(s)	419
HpaII	CCGG	1 cut(s)	810
HphI	GGTGA	4 cut(s)	155, 215, 278, 368
Hpy166II	GTNNAC	1 cut(s)	163
Hpy188I	TCNGA	1 cut(s)	366
Hpy188III	TCNNGA	2 cut(s)	386, 416
Hpy8I	GTNNAC	1 cut(s)	163
HpyAV	CCTTC	3 cut(s)	170, 487, 844
HpyCH4III	ACNGT	1 cut(s)	203
HpyCH4IV	ACGT	1 cut(s)	739
HpyF10VI	GCNNNNNNNGC	8 cut(s)	408, 450, 851, 860, 932, 953, 1013, 1058
HpyF3I	CTNAG	4 cut(s)	96, 365, 773, 1020
HpySE526I	ACGT	1 cut(s)	739
Hsp92II	CATG	5 cut(s)	172, 349, 353, 586, 868
Kzo9I	GATC	3 cut(s)	358, 576, 812
LguI	GCTCTTC	1 cut(s)	707
LmnI	GCTCC	1 cut(s)	508
Lsp1109I	GCAGC	6 cut(s)	79, 699, 935, 955, 1120, 1155
LweI	GCATC	4 cut(s)	307, 889, 910, 1109
MaeI	CTAG	1 cut(s)	975
MaeII	ACGT	1 cut(s)	739
MaeIII	GTNAC	3 cut(s)	376, 596, 628
MalI	GATC	3 cut(s)	360, 578, 814
MboI	GATC	3 cut(s)	358, 576, 812
MboII	GAAGA	5 cut(s)	325, 571, 724, 1063, 1138
MfeI	CAATTG	1 cut(s)	543
MflI	RGATCY	1 cut(s)	576
MhlI	GDGCHC	2 cut(s)	438, 461
MlsI	TGGCCA	2 cut(s)	248, 561
MluCI	AATT	4 cut(s)	69, 403, 543, 694
MluNI	TGGCCA	2 cut(s)	248, 561
MmeI	TCCRAC	1 cut(s)	148
Mox20I	TGGCCA	2 cut(s)	248, 561
Mph1103I	ATGCAT	1 cut(s)	351
MroXI	GAANNNNTTC	2 cut(s)	854, 1070
MscI	TGGCCA	2 cut(s)	248, 561
MseI	TTAA	2 cut(s)	834, 1159
MslI	CAYNNNNRTG	2 cut(s)	87, 354
Msp20I	TGGCCA	2 cut(s)	248, 561
MspA1I	CMGCKG	1 cut(s)	926
MspI	CCGG	1 cut(s)	810
MspR9I	CCNGG	3 cut(s)	150, 842, 873
MunI	CAATTG	1 cut(s)	543
Mva1269I	GAATGC	2 cut(s)	854, 1135
MvaI	CCWGG	3 cut(s)	150, 842, 873
MwoI	GCNNNNNNNGC	8 cut(s)	408, 450, 851, 860, 932, 953, 1013, 1058
NcoI	CCATGG	1 cut(s)	864
NdeII	GATC	3 cut(s)	358, 576, 812
NlaIII	CATG	5 cut(s)	172, 349, 353, 586, 868
NlaIV	GGNNCC	3 cut(s)	284, 703, 870
NmuCI	GTSAC	2 cut(s)	376, 628
NsiI	ATGCAT	1 cut(s)	351
PciSI	GCTCTTC	1 cut(s)	707
PctI	GAATGC	2 cut(s)	854, 1135
PdmI	GAANNNNTTC	2 cut(s)	854, 1070
PfeI	GAWTC	1 cut(s)	419
PfoI	TCCNGGA	1 cut(s)	871
PkrI	GCNGC	7 cut(s)	94, 689, 925, 970, 1135, 1145, 1148
PpuMI	RGGWCCY	1 cut(s)	880
Psp5II	RGGWCCY	1 cut(s)	880
Psp6I	CCWGG	3 cut(s)	148, 840, 871
PspGI	CCWGG	3 cut(s)	148, 840, 871
PspN4I	GGNNCC	3 cut(s)	284, 703, 870
PspPI	GGNCC	2 cut(s)	282, 880
PspPPI	RGGWCCY	1 cut(s)	880
PsuI	RGATCY	1 cut(s)	576
PvuII	CAGCTG	1 cut(s)	926
RseI	CAYNNNNRTG	2 cut(s)	87, 354
SapI	GCTCTTC	1 cut(s)	707
SaqAI	TTAA	2 cut(s)	834, 1159
SatI	GCNGC	7 cut(s)	93, 688, 924, 969, 1134, 1144, 1147
Sau3AI	GATC	3 cut(s)	358, 576, 812
Sau96I	GGNCC	2 cut(s)	282, 880
ScrFI	CCNGG	3 cut(s)	150, 842, 873
SduI	GDGCHC	2 cut(s)	438, 461
SfaNI	GCATC	4 cut(s)	307, 889, 910, 1109
SinI	GGWCC	1 cut(s)	880
SmiMI	CAYNNNNRTG	2 cut(s)	87, 354
SmlI	CTYRAG	2 cut(s)	215, 454
SmoI	CTYRAG	2 cut(s)	215, 454
Sse9I	AATT	4 cut(s)	69, 403, 543, 694
SspI	AATATT	1 cut(s)	238
SspMI	CTAG	1 cut(s)	975
StyD4I	CCNGG	3 cut(s)	148, 840, 871
StyI	CCWWGG	1 cut(s)	864
TaaI	ACNGT	1 cut(s)	203
TaiI	ACGT	1 cut(s)	742
TasI	AATT	4 cut(s)	69, 403, 543, 694
TfiI	GAWTC	1 cut(s)	419
Tru1I	TTAA	2 cut(s)	834, 1159
Tru9I	TTAA	2 cut(s)	834, 1159
TscAI	CASTG	3 cut(s)	284, 822, 1063
TseFI	GTSAC	2 cut(s)	376, 628
TseI	GCWGC	7 cut(s)	92, 687, 923, 968, 1133, 1143, 1146
Tsp45I	GTSAC	2 cut(s)	376, 628
TspDTI	ATGAA	5 cut(s)	189, 199, 285, 411, 571
TspRI	CASTG	3 cut(s)	284, 822, 1063
VpaK11BI	GGWCC	1 cut(s)	880
XapI	RAATTY	2 cut(s)	69, 694
XmnI	GAANNNNTTC	2 cut(s)	854, 1070
XspI	CTAG	1 cut(s)	975
Zsp2I	ATGCAT	1 cut(s)	351

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.