Prupe.7G227500_v2.0.a1

Alpha/beta hydrolase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
OG0014310
Physical Location & Seq
Reverse (-)
20092609 .. 20094324
1716 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.7G227500.1

Sequence Viewer

Length: 855 bp
ATGGTGCTAGAAAAGAGCCTTTCATCAGCCATAAACACAAAAATTATGGGCTCATCAGGAAGTGAAGAAACCATAGTTCTAGCTCATGGGTATGGAGGAGACCAGTCTGTGTGGGACAAAATCGTCCCCTACTTGGCTGAGCATTACCGAGTTGTTGTTTTTGACTGGCCTTTCTCAGGTGCTGTTAACAACAAGGACCTCTTTGATCCTAGCAAATATTCTTCCTATGATGCTTTTGCAAATGATTTAATTGCCCTCTTGGATGAGCTCAACTTGAAATCCACTGTCTTTGTTGGCCACTCCATGTCTGGTATGATTGGATGCATTGCTTCCATTAACAGACCTGACCTCTTCAAGACCCTCATCCTCATTGGAGCTTCTCCTAGGTACATAAATACAGAAGACTATGAAGGTGGGTTGGAGATGTCAGATATTACACAAATCATCTCAGCCATAGAATCCAACTATCACAACTGGGCTGCCTACTTCGCTTCCCTTGCTGTGGACCCAAATGACCCTCTCTCTGTCGACAAGTTTGTCAAGTGCCTGCGCAGAATGAGGCCTGAAGTTGCGCTGGCCTTGGCCAAAACCGTCTTTTACAGTGACCAGAGAGACGTTCTTGACCAGGTTTCAACTCCATGCACCATCATCAACACCTCCTCTGACATTGTTGCTCCAAACTCGGTCGCCTTCTACATGCAGAAGAAAATCAAGGGAAAGTCCACTGTGGAGATTATAAACACCAATGGCCATTTCCCACAGTTGACTGCCCACCTTGAGCTTCTTGATGTGCTGGGAAAAGTCTTGGGCCTTAAATTTGATCATCAAGATCCAGATATCGTTGGGGTGAATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Abhydrolase_1 Abhydrolase_6

Protein Analysis

285

Amino Acids

31.31

Weight (kDa)

5.02

Isoelectric Point (pI)

31.11

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0014310)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G24420
fragaria_vesca FvH4_1g05320
malus_domestica MD02G1056400.v1.1 MD15G1189400.v1.1
prunus_persica Prupe.7G227500_v2.0.a1
pyrus_communis pycom02g04550 pycom15g16980
rosa_chinensis RchiOBHm_Chr2g0091021
rosa_laevigata RLG00000016167
rosa_multiflora Rmu_sc0003305.1_g000006
rosa_roxburghii Rroxscaffold_2G00150680
rosa_rugosa Rorug02G0011500
rosa_samantha Rh2AG057900 Rh2BG056200 Rh2CG058500 Rh2DG057600
rosa_wichuraiana Rw2G005140

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 737
AasI GACNNNNNNGTC 2 cut(s) 122, 536
Acc16I TGCGCA 1 cut(s) 551
AccI GTMKAC 1 cut(s) 528
AclWI GGATC 2 cut(s) 200, 824
AcoI YGGCCR 3 cut(s) 295, 582, 748
AcsI RAATTY 1 cut(s) 815
AcuI CTGAAG 1 cut(s) 585
AfaI GTAC 1 cut(s) 389
AfiI CCNNNNNNNGG 3 cut(s) 133, 176, 502
AgsI TTSAA 3 cut(s) 277, 355, 633
AjnI CCWGG 1 cut(s) 624
AjuI GAANNNNNNNTTGG 2 cut(s) 737, 769
AluBI AGCT 4 cut(s) 83, 268, 377, 781
AluI AGCT 4 cut(s) 83, 268, 377, 781
Alw21I GWGCWC 1 cut(s) 270
Alw26I GTCTC 2 cut(s) 93, 606
AlwI GGATC 2 cut(s) 200, 824
AlwNI CAGNNNCTG 1 cut(s) 182
AoxI GGCC 7 cut(s) 167, 295, 560, 576, 582, 748, 808
ApeKI GCWGC 1 cut(s) 479
ApoI RAATTY 1 cut(s) 815
AspA2I CCTAGG 1 cut(s) 383
AspLEI GCGC 2 cut(s) 552, 574
AspS9I GGNCC 3 cut(s) 196, 505, 808
AvaII GGWCC 2 cut(s) 196, 505
AvrII CCTAGG 1 cut(s) 383
BalI TGGCCA 3 cut(s) 297, 584, 750
BanII GRGCYC 2 cut(s) 53, 270
BbsI GAAGAC 1 cut(s) 408
Bbv12I GWGCWC 1 cut(s) 270
BbvI GCAGC 1 cut(s) 466
BccI CCATC 1 cut(s) 653
BciT130I CCWGG 1 cut(s) 626
BclI TGATCA 1 cut(s) 820
BcoDI GTCTC 2 cut(s) 93, 606
BfaI CTAG 4 cut(s) 8, 80, 210, 384
BisI GCNGC 1 cut(s) 480
BlnI CCTAGG 1 cut(s) 383
BlpI GCTNAGC 1 cut(s) 138
BlsI GCNGC 1 cut(s) 481
Bme1390I CCNGG 1 cut(s) 626
Bme18I GGWCC 2 cut(s) 196, 505
BmgT120I GGNCC 3 cut(s) 196, 505, 808
BmiI GGNNCC 1 cut(s) 507
BmrFI CCNGG 1 cut(s) 626
BmrI ACTGGG 1 cut(s) 484
BmsI GCATC 2 cut(s) 220, 311
BmuI ACTGGG 1 cut(s) 484
BpiI GAAGAC 1 cut(s) 408
Bpu1102I GCTNAGC 1 cut(s) 138
BpuEI CTTGAG 1 cut(s) 797
BsaI GGTCTC 1 cut(s) 93
BsaJI CCNNGG 2 cut(s) 383, 579
Bsc4I CCNNNNNNNGG 3 cut(s) 133, 176, 502
Bse1I ACTGG 3 cut(s) 103, 170, 479
Bse3DI GCAATG 1 cut(s) 324
BseBI CCWGG 1 cut(s) 626
BseDI CCNNGG 2 cut(s) 383, 579
BseGI GGATG 3 cut(s) 268, 326, 363
BseLI CCNNNNNNNGG 3 cut(s) 133, 176, 502
BseMI GCAATG 1 cut(s) 324
BseMII CTCAG 3 cut(s) 129, 189, 462
BseNI ACTGG 3 cut(s) 103, 170, 479
BseRI GAGGAG 2 cut(s) 111, 649
BseXI GCAGC 1 cut(s) 466
BseYI CCCAGC 1 cut(s) 793
Bsh1285I CGRYCG 1 cut(s) 687
BshFI GGCC 7 cut(s) 169, 297, 562, 578, 584, 750, 810
BsiEI CGRYCG 1 cut(s) 687
BsiHKAI GWGCWC 1 cut(s) 270
BslFI GGGAC 2 cut(s) 110, 128
BslI CCNNNNNNNGG 3 cut(s) 133, 176, 502
BsmAI GTCTC 2 cut(s) 93, 606
BsmBI CGTCTC 1 cut(s) 606
BsmFI GGGAC 2 cut(s) 110, 128
BsnI GGCC 7 cut(s) 169, 297, 562, 578, 584, 750, 810
Bso31I GGTCTC 1 cut(s) 93
Bsp1286I GDGCHC 2 cut(s) 53, 270
Bsp143I GATC 3 cut(s) 205, 820, 829
Bsp1720I GCTNAGC 1 cut(s) 138
BspANI GGCC 7 cut(s) 169, 297, 562, 578, 584, 750, 810
BspCNI CTCAG 3 cut(s) 130, 188, 461
BspLI GGNNCC 1 cut(s) 507
BspPI GGATC 2 cut(s) 200, 824
BspTNI GGTCTC 1 cut(s) 93
BsrDI GCAATG 1 cut(s) 324
BsrI ACTGG 3 cut(s) 103, 170, 479
BssECI CCNNGG 2 cut(s) 383, 579
BssMI GATC 3 cut(s) 205, 820, 829
BssT1I CCWWGG 2 cut(s) 383, 579
Bst2UI CCWGG 1 cut(s) 626
Bst4CI ACNGT 5 cut(s) 286, 592, 602, 727, 762
Bst6I CTCTTC 1 cut(s) 356
BstC8I GCNNGC 2 cut(s) 548, 576
BstDEI CTNAG 3 cut(s) 138, 175, 448
BstENI CCTNNNNNAGG 1 cut(s) 174
BstF5I GGATG 3 cut(s) 268, 326, 363
BstHHI GCGC 2 cut(s) 552, 574
BstKTI GATC 3 cut(s) 208, 823, 832
BstMAI GTCTC 2 cut(s) 93, 606
BstMBI GATC 3 cut(s) 205, 820, 829
BstMCI CGRYCG 1 cut(s) 687
BstMWI GCNNNNNNNGC 2 cut(s) 488, 497
BstNI CCWGG 1 cut(s) 626
BstNSI RCATGY 1 cut(s) 700
BstSCI CCNGG 1 cut(s) 624
BstV1I GCAGC 1 cut(s) 466
BstV2I GAAGAC 1 cut(s) 408
BstX2I RGATCY 1 cut(s) 829
BstYI RGATCY 1 cut(s) 829
BsuRI GGCC 7 cut(s) 169, 297, 562, 578, 584, 750, 810
BtsCI GGATG 3 cut(s) 268, 326, 363
BtsIMutI CAGTG 3 cut(s) 282, 607, 723
Cac8I GCNNGC 2 cut(s) 548, 576
CaiI CAGNNNCTG 1 cut(s) 182
CfoI GCGC 2 cut(s) 552, 574
Cfr13I GGNCC 3 cut(s) 196, 505, 808
CsiI ACCWGGT 1 cut(s) 624
Csp6I GTAC 1 cut(s) 388
CspCI CAANNNNNGTGG 2 cut(s) 271, 306
CviAII CATG 4 cut(s) 86, 304, 639, 697
CviQI GTAC 1 cut(s) 388
DdeI CTNAG 3 cut(s) 138, 175, 448
DpnI GATC 3 cut(s) 207, 822, 831
DpnII GATC 3 cut(s) 205, 820, 829
DrdI GACNNNNNNGTC 2 cut(s) 122, 536
DseDI GACNNNNNNGTC 2 cut(s) 122, 536
EaeI YGGCCR 3 cut(s) 295, 582, 748
Eam1104I CTCTTC 1 cut(s) 356
EarI CTCTTC 1 cut(s) 356
Ecl136II GAGCTC 1 cut(s) 268
Eco130I CCWWGG 2 cut(s) 383, 579
Eco147I AGGCCT 1 cut(s) 562
Eco24I GRGCYC 2 cut(s) 53, 270
Eco31I GGTCTC 1 cut(s) 93
Eco32I GATATC 1 cut(s) 838
Eco47I GGWCC 2 cut(s) 196, 505
Eco53kI GAGCTC 1 cut(s) 268
Eco57I CTGAAG 1 cut(s) 585
EcoICRI GAGCTC 1 cut(s) 268
EcoNI CCTNNNNNAGG 1 cut(s) 174
EcoO109I RGGNCCY 1 cut(s) 196
EcoRII CCWGG 1 cut(s) 624
EcoRV GATATC 1 cut(s) 838
EcoT14I CCWWGG 2 cut(s) 383, 579
EcoT22I ATGCAT 1 cut(s) 326
EcoT38I GRGCYC 2 cut(s) 53, 270
ErhI CCWWGG 2 cut(s) 383, 579
Esp3I CGTCTC 1 cut(s) 606
FaeI CATG 4 cut(s) 89, 307, 642, 700
FalI AAGNNNNNCTT 2 cut(s) 185, 217
FaqI GGGAC 2 cut(s) 110, 128
FatI CATG 4 cut(s) 85, 303, 638, 696
FbaI TGATCA 1 cut(s) 820
FblI GTMKAC 1 cut(s) 528
Fnu4HI GCNGC 1 cut(s) 480
FokI GGATG 3 cut(s) 275, 333, 350
FriOI GRGCYC 2 cut(s) 53, 270
Fsp4HI GCNGC 1 cut(s) 480
FspBI CTAG 4 cut(s) 8, 80, 210, 384
FspI TGCGCA 1 cut(s) 551
GlaI GCGC 2 cut(s) 551, 573
GluI GCNGC 1 cut(s) 480
GsaI CCCAGC 1 cut(s) 797
HaeIII GGCC 7 cut(s) 169, 297, 562, 578, 584, 750, 810
HhaI GCGC 2 cut(s) 552, 574
Hin1II CATG 4 cut(s) 89, 307, 642, 700
Hin6I GCGC 2 cut(s) 550, 572
HinP1I GCGC 2 cut(s) 550, 572
HincII GTYRAC 3 cut(s) 187, 529, 765
HindII GTYRAC 3 cut(s) 187, 529, 765
HinfI GANTC 1 cut(s) 458
HpaI GTTAAC 1 cut(s) 187
Hpy166II GTNNAC 5 cut(s) 187, 505, 529, 723, 765
Hpy188I TCNGA 2 cut(s) 430, 664
Hpy188III TCNNGA 6 cut(s) 57, 355, 620, 785, 827, 833
Hpy8I GTNNAC 5 cut(s) 187, 505, 529, 723, 765
HpyAV CCTTC 2 cut(s) 404, 700
HpyCH4III ACNGT 5 cut(s) 286, 592, 602, 727, 762
HpyCH4IV ACGT 1 cut(s) 615
HpyCH4V TGCA 4 cut(s) 239, 324, 642, 700
HpyF10VI GCNNNNNNNGC 2 cut(s) 488, 497
HpyF3I CTNAG 3 cut(s) 138, 175, 448
HpySE526I ACGT 1 cut(s) 615
Hsp92II CATG 4 cut(s) 89, 307, 642, 700
HspAI GCGC 2 cut(s) 550, 572
Ksp22I TGATCA 1 cut(s) 820
KspAI GTTAAC 1 cut(s) 187
Kzo9I GATC 3 cut(s) 205, 820, 829
LmnI GCTCC 2 cut(s) 374, 679
Lsp1109I GCAGC 1 cut(s) 466
LweI GCATC 2 cut(s) 220, 311
MabI ACCWGGT 1 cut(s) 624
MaeI CTAG 4 cut(s) 8, 80, 210, 384
MaeII ACGT 1 cut(s) 615
MaeIII GTNAC 1 cut(s) 602
MalI GATC 3 cut(s) 207, 822, 831
MboI GATC 3 cut(s) 205, 820, 829
MboII GAAGA 5 cut(s) 77, 213, 343, 413, 715
MflI RGATCY 1 cut(s) 829
MhlI GDGCHC 2 cut(s) 53, 270
MlsI TGGCCA 3 cut(s) 297, 584, 750
MluCI AATT 4 cut(s) 42, 249, 815, 850
MluNI TGGCCA 3 cut(s) 297, 584, 750
MmeI TCCRAC 2 cut(s) 399, 486
Mox20I TGGCCA 3 cut(s) 297, 584, 750
Mph1103I ATGCAT 1 cut(s) 326
MscI TGGCCA 3 cut(s) 297, 584, 750
MseI TTAA 5 cut(s) 186, 248, 336, 813, 853
MslI CAYNNNNRTG 1 cut(s) 90
Msp20I TGGCCA 3 cut(s) 297, 584, 750
MspR9I CCNGG 1 cut(s) 626
MvaI CCWGG 1 cut(s) 626
MwoI GCNNNNNNNGC 2 cut(s) 488, 497
NdeII GATC 3 cut(s) 205, 820, 829
NlaIII CATG 4 cut(s) 89, 307, 642, 700
NlaIV GGNNCC 1 cut(s) 507
NmuCI GTSAC 1 cut(s) 602
NsbI TGCGCA 1 cut(s) 551
NsiI ATGCAT 1 cut(s) 326
NspI RCATGY 1 cut(s) 700
PceI AGGCCT 1 cut(s) 562
PfeI GAWTC 1 cut(s) 458
PkrI GCNGC 1 cut(s) 481
PpuMI RGGWCCY 1 cut(s) 196
PsiI TTATAA 1 cut(s) 737
Psp124BI GAGCTC 1 cut(s) 270
Psp5II RGGWCCY 1 cut(s) 196
Psp6I CCWGG 1 cut(s) 624
PspFI CCCAGC 1 cut(s) 793
PspGI CCWGG 1 cut(s) 624
PspN4I GGNNCC 1 cut(s) 507
PspPI GGNCC 3 cut(s) 196, 505, 808
PspPPI RGGWCCY 1 cut(s) 196
PstNI CAGNNNCTG 1 cut(s) 182
PsuI RGATCY 1 cut(s) 829
RsaI GTAC 1 cut(s) 389
RsaNI GTAC 1 cut(s) 388
RseI CAYNNNNRTG 1 cut(s) 90
SacI GAGCTC 1 cut(s) 270
SalI GTCGAC 1 cut(s) 527
SaqAI TTAA 5 cut(s) 186, 248, 336, 813, 853
SatI GCNGC 1 cut(s) 480
Sau3AI GATC 3 cut(s) 205, 820, 829
Sau96I GGNCC 3 cut(s) 196, 505, 808
ScrFI CCNGG 1 cut(s) 626
SduI GDGCHC 2 cut(s) 53, 270
SexAI ACCWGGT 1 cut(s) 624
SfaNI GCATC 2 cut(s) 220, 311
SinI GGWCC 2 cut(s) 196, 505
SmiMI CAYNNNNRTG 1 cut(s) 90
SmlI CTYRAG 1 cut(s) 776
SmoI CTYRAG 1 cut(s) 776
Sse9I AATT 4 cut(s) 42, 249, 815, 850
SseBI AGGCCT 1 cut(s) 562
SspI AATATT 1 cut(s) 218
SspMI CTAG 4 cut(s) 8, 80, 210, 384
SstI GAGCTC 1 cut(s) 270
StuI AGGCCT 1 cut(s) 562
StyD4I CCNGG 1 cut(s) 624
StyI CCWWGG 2 cut(s) 383, 579
TaaI ACNGT 5 cut(s) 286, 592, 602, 727, 762
TaiI ACGT 1 cut(s) 618
TaqI TCGA 1 cut(s) 528
TaqII GACCGA 1 cut(s) 673
TasI AATT 4 cut(s) 42, 249, 815, 850
TfiI GAWTC 1 cut(s) 458
Tru1I TTAA 5 cut(s) 186, 248, 336, 813, 853
Tru9I TTAA 5 cut(s) 186, 248, 336, 813, 853
TscAI CASTG 3 cut(s) 289, 607, 730
TseFI GTSAC 1 cut(s) 602
TseI GCWGC 1 cut(s) 479
Tsp45I GTSAC 1 cut(s) 602
TspDTI ATGAA 2 cut(s) 12, 423
TspRI CASTG 3 cut(s) 289, 607, 730
VpaK11BI GGWCC 2 cut(s) 196, 505
XagI CCTNNNNNAGG 1 cut(s) 174
XapI RAATTY 1 cut(s) 815
XceI RCATGY 1 cut(s) 700
XcmI CCANNNNNNNNNTGG 1 cut(s) 305
XmaJI CCTAGG 1 cut(s) 383
XmiI GTMKAC 1 cut(s) 528
XspI CTAG 4 cut(s) 8, 80, 210, 384
Zsp2I ATGCAT 1 cut(s) 326
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.