Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0016147

Physical Location & Seq

Genomic Coordinates Reverse (-)

20276766 .. 20277987

Gene Structure 1222 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G231400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 921 bp

ATGGAAAACCGATTCAAGCTCAAGCTTTCTAACATGATTCGCTCCTCATTTGGCTCCTGCCGATCCCGAAACTTATCGGATGTGATCCAAAAAGCAGTGTTCTTGCCTGAAAACCAGCAAGACTTGCCCACCATTGAGCCTCCTAAGCAGGTGGCTCGACCCTTCCCCTCCATTTGCAGACCCAAATGCTCAGACCCCAACCAACCCATCATCAACAATCACTGTGTCATCTCTACCAAAGATGTCATGCTCCCAAGACGCAAAATTTTTGAACGTTGTTCACCTTTTGTTAAGCCCTTTAACCCTGATGGCCAAACATGCCCTCCAGCCTCACCTTTCGCAGCTTTAAACCCTTTCTACGACCACCATGATAAGAGCTTCAGACAGAGAAAAAACAGAGATAAGAAAAAGAAGAAAAAGAACAAGAAGAAGAAGACGAGCAATGCTAAGAAGAACAAGCCGAGCAGCGAGTTTTTCCCCTTCAGCTCTTCTTCTTTTGATAGTAATAACTACAAAGGGTGGTGGTCGAGCAGCGATGACGAGAAGAGAGAGGACGAGACAGATACTCTGTTTTCTTCAAAGAGCCACTCTTCTGATTCATCTGGGTCTCGATTACGACGTCGTCCTCCACGAAACGGACACAGTACTAGCCGGAGAAGAGCGAGCTCTGAAGTGGGTCTGCTTCCGATACAAGGAAAAGTGAAGGATAGCTTTGCGGTGGTGAAGAAGTCGAGCGATCCGTACAATGACTTCAGGACATCAATGGTGGAAATGATCGTTGAGAAGCAGATATTTTCAGCCCAGGATCTCGAGCAGCTTTTGCAGTGTTTTCTGTCACTGAATTCGTCGCTTCATCATAGAGTTATTCTTGAGGTTTTCACTGAGATTTGGGAAGCTCTGTTCTCTAACTGGGGATCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0006355 GO:0008150 GO:0009889 GO:0009890 GO:0009892 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010629 GO:0019219 GO:0019222 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0045892 GO:0045934 GO:0048519 GO:0048523 GO:0050789 GO:0050794 GO:0051171 GO:0051172 GO:0051252 GO:0051253 GO:0060255 GO:0065007 GO:0080090 GO:1902679 GO:1903506 GO:1903507 GO:2000112 GO:2000113 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Ovate

Protein Analysis

307

Amino Acids

35.2

Weight (kDa)

9.83

Isoelectric Point (pI)

63.05

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0016147)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G19650
fragaria_vesca	FvH4_1g04770
malus_domestica	MD15G1184600.v1.1
prunus_persica	Prupe.7G231400_v2.0.a1
pyrus_communis	pycom02g03890
rosa_chinensis	RchiOBHm_Chr2g0090371
rosa_laevigata	RLG00000016103
rosa_multiflora	Rmu_sc0004514.1_g000008
rosa_roxburghii	Rroxscaffold_2G00151220
rosa_rugosa	Rorug02G0006800
rosa_samantha	Rh2AG052900 Rh2BG051700 Rh2CG053800 Rh2DG052900
rosa_wichuraiana	Rw2G004400

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	139
AatII	GACGTC	1 cut(s)	622
Acc36I	ACCTGC	1 cut(s)	139
AciI	CCGC	1 cut(s)	716
AclI	AACGTT	1 cut(s)	274
AclWI	GGATC	4 cut(s)	57, 79, 731, 813
AcoI	YGGCCR	1 cut(s)	310
AcsI	RAATTY	2 cut(s)	264, 841
AcuI	CTGAAG	4 cut(s)	364, 466, 690, 736
AcyI	GRCGYC	1 cut(s)	619
AfaI	GTAC	2 cut(s)	646, 743
AfiI	CCNNNNNNNGG	2 cut(s)	635, 692
AgsI	TTSAA	3 cut(s)	16, 272, 579
AjnI	CCWGG	1 cut(s)	801
AloI	GAACNNNNNNTCC	2 cut(s)	884, 916
AluBI	AGCT	9 cut(s)	19, 25, 344, 378, 486, 666, 711, 817, 896
AluI	AGCT	9 cut(s)	19, 25, 344, 378, 486, 666, 711, 817, 896
Alw21I	GWGCWC	1 cut(s)	668
Alw26I	GTCTC	2 cut(s)	551, 612
AlwI	GGATC	4 cut(s)	57, 79, 731, 813
Ama87I	CYCGRG	1 cut(s)	809
AoxI	GGCC	1 cut(s)	310
ApeKI	GCWGC	4 cut(s)	341, 465, 531, 814
ApoI	RAATTY	2 cut(s)	264, 841
AsuHPI	GGTGA	3 cut(s)	273, 324, 733
AvaI	CYCGRG	1 cut(s)	809
BalI	TGGCCA	1 cut(s)	312
BanII	GRGCYC	1 cut(s)	668
BarI	GAAGNNNNNNTAC	2 cut(s)	734, 766
BbsI	GAAGAC	1 cut(s)	440
Bbv12I	GWGCWC	1 cut(s)	668
BbvI	GCAGC	4 cut(s)	353, 477, 543, 826
BccI	CCATC	2 cut(s)	215, 302
BcgI	CGANNNNNNTGC	2 cut(s)	137, 171
BciT130I	CCWGG	1 cut(s)	803
BcoDI	GTCTC	2 cut(s)	551, 612
BfaI	CTAG	1 cut(s)	648
BfuAI	ACCTGC	1 cut(s)	139
BisI	GCNGC	4 cut(s)	342, 466, 532, 815
BlsI	GCNGC	4 cut(s)	343, 467, 533, 816
BmcAI	AGTACT	1 cut(s)	646
Bme1390I	CCNGG	1 cut(s)	803
BmeT110I	CYCGRG	1 cut(s)	809
BmiI	GGNNCC	1 cut(s)	55
BmrFI	CCNGG	1 cut(s)	803
BmrI	ACTGGG	1 cut(s)	919
BmuI	ACTGGG	1 cut(s)	919
BpiI	GAAGAC	1 cut(s)	440
BpmI	CTGGAG	1 cut(s)	309
Bpu10I	CCTNAGC	1 cut(s)	144
BpuEI	CTTGAG	2 cut(s)	5, 890
BsaHI	GRCGYC	1 cut(s)	619
BsaI	GGTCTC	1 cut(s)	612
BsaJI	CCNNGG	1 cut(s)	801
BsaXI	ACNNNNNCTCC	2 cut(s)	307, 337
Bsc4I	CCNNNNNNNGG	2 cut(s)	635, 692
Bse1I	ACTGG	1 cut(s)	914
Bse3DI	GCAATG	1 cut(s)	448
BseBI	CCWGG	1 cut(s)	803
BseDI	CCNNGG	1 cut(s)	801
BseGI	GGATG	1 cut(s)	85
BseLI	CCNNNNNNNGG	2 cut(s)	635, 692
BseMI	GCAATG	1 cut(s)	448
BseMII	CTCAG	2 cut(s)	204, 873
BseNI	ACTGG	1 cut(s)	914
BseRI	GAGGAG	1 cut(s)	34
BseXI	GCAGC	4 cut(s)	353, 477, 543, 826
BshFI	GGCC	1 cut(s)	312
BsiHKAI	GWGCWC	1 cut(s)	668
BsiHKCI	CYCGRG	1 cut(s)	809
BsiSI	CCGG	1 cut(s)	652
BslI	CCNNNNNNNGG	2 cut(s)	635, 692
BsmAI	GTCTC	2 cut(s)	551, 612
BsnI	GGCC	1 cut(s)	312
Bso31I	GGTCTC	1 cut(s)	612
BsoBI	CYCGRG	1 cut(s)	809
Bsp1286I	GDGCHC	1 cut(s)	668
Bsp143I	GATC	6 cut(s)	62, 84, 736, 774, 805, 914
BspACI	CCGC	1 cut(s)	716
BspANI	GGCC	1 cut(s)	312
BspCNI	CTCAG	2 cut(s)	203, 874
BspLI	GGNNCC	1 cut(s)	55
BspMI	ACCTGC	1 cut(s)	139
BspPI	GGATC	4 cut(s)	57, 79, 731, 813
BspQI	GCTCTTC	2 cut(s)	493, 652
BspTNI	GGTCTC	1 cut(s)	612
BsrDI	GCAATG	1 cut(s)	448
BsrI	ACTGG	1 cut(s)	914
BssECI	CCNNGG	1 cut(s)	801
BssMI	GATC	6 cut(s)	62, 84, 736, 774, 805, 914
BssNI	GRCGYC	1 cut(s)	619
Bst2UI	CCWGG	1 cut(s)	803
Bst4CI	ACNGT	2 cut(s)	224, 644
Bst6I	CTCTTC	4 cut(s)	493, 539, 595, 652
BstACI	GRCGYC	1 cut(s)	619
BstAPI	GCANNNNNTGC	2 cut(s)	124, 820
BstC8I	GCNNGC	1 cut(s)	664
BstDEI	CTNAG	4 cut(s)	144, 190, 447, 882
BstF5I	GGATG	1 cut(s)	85
BstKTI	GATC	6 cut(s)	65, 87, 739, 777, 808, 917
BstMAI	GTCTC	2 cut(s)	551, 612
BstMBI	GATC	6 cut(s)	62, 84, 736, 774, 805, 914
BstMWI	GCNNNNNNNGC	4 cut(s)	124, 145, 318, 820
BstNI	CCWGG	1 cut(s)	803
BstNSI	RCATGY	1 cut(s)	321
BstSCI	CCNGG	1 cut(s)	801
BstV1I	GCAGC	4 cut(s)	353, 477, 543, 826
BstV2I	GAAGAC	1 cut(s)	440
BstX2I	RGATCY	2 cut(s)	805, 914
BstYI	RGATCY	2 cut(s)	805, 914
BsuRI	GGCC	1 cut(s)	312
BtgZI	GCGATG	1 cut(s)	549
BtsCI	GGATG	1 cut(s)	85
BtsI	GCAGTG	2 cut(s)	102, 830
BtsIMutI	CAGTG	5 cut(s)	102, 220, 830, 836, 879
BveI	ACCTGC	1 cut(s)	139
Cac8I	GCNNGC	1 cut(s)	664
CseI	GACGC	1 cut(s)	267
Csp6I	GTAC	2 cut(s)	645, 742
CviAII	CATG	4 cut(s)	34, 247, 318, 368
CviQI	GTAC	2 cut(s)	645, 742
DdeI	CTNAG	4 cut(s)	144, 190, 447, 882
DpnI	GATC	6 cut(s)	64, 86, 738, 776, 807, 916
DpnII	GATC	6 cut(s)	62, 84, 736, 774, 805, 914
DraI	TTTAAA	1 cut(s)	348
EaeI	YGGCCR	1 cut(s)	310
Eam1104I	CTCTTC	4 cut(s)	493, 539, 595, 652
EarI	CTCTTC	4 cut(s)	493, 539, 595, 652
Ecl136II	GAGCTC	1 cut(s)	666
Eco24I	GRGCYC	1 cut(s)	668
Eco31I	GGTCTC	1 cut(s)	612
Eco53kI	GAGCTC	1 cut(s)	666
Eco57I	CTGAAG	4 cut(s)	364, 466, 690, 736
Eco88I	CYCGRG	1 cut(s)	809
EcoICRI	GAGCTC	1 cut(s)	666
EcoRI	GAATTC	1 cut(s)	841
EcoRII	CCWGG	1 cut(s)	801
EcoT38I	GRGCYC	1 cut(s)	668
FaeI	CATG	4 cut(s)	37, 250, 321, 371
FaiI	YATR	5 cut(s)	35, 248, 319, 369, 858
FalI	AAGNNNNNCTT	2 cut(s)	695, 727
FatI	CATG	4 cut(s)	33, 246, 317, 367
Fnu4HI	GCNGC	4 cut(s)	342, 466, 532, 815
FokI	GGATG	1 cut(s)	92
FriOI	GRGCYC	1 cut(s)	668
Fsp4HI	GCNGC	4 cut(s)	342, 466, 532, 815
FspBI	CTAG	1 cut(s)	648
GluI	GCNGC	4 cut(s)	342, 466, 532, 815
GsuI	CTGGAG	1 cut(s)	309
HaeIII	GGCC	1 cut(s)	312
HapII	CCGG	1 cut(s)	652
HgaI	GACGC	1 cut(s)	267
Hin1I	GRCGYC	1 cut(s)	619
Hin1II	CATG	4 cut(s)	37, 250, 321, 371
HindIII	AAGCTT	1 cut(s)	23
HinfI	GANTC	3 cut(s)	12, 37, 596
HpaII	CCGG	1 cut(s)	652
HphI	GGTGA	3 cut(s)	273, 324, 733
Hpy166II	GTNNAC	1 cut(s)	281
Hpy188I	TCNGA	6 cut(s)	79, 193, 383, 595, 670, 687
Hpy188III	TCNNGA	6 cut(s)	66, 609, 754, 809, 869, 918
Hpy8I	GTNNAC	1 cut(s)	281
Hpy99I	CGWCG	3 cut(s)	621, 624, 850
HpyAV	CCTTC	3 cut(s)	172, 490, 697
HpyCH4III	ACNGT	2 cut(s)	224, 644
HpyCH4IV	ACGT	2 cut(s)	274, 619
HpyCH4V	TGCA	2 cut(s)	177, 823
HpyF10VI	GCNNNNNNNGC	4 cut(s)	124, 145, 318, 820
HpyF3I	CTNAG	4 cut(s)	144, 190, 447, 882
HpySE526I	ACGT	2 cut(s)	274, 619
Hsp92I	GRCGYC	1 cut(s)	619
Hsp92II	CATG	4 cut(s)	37, 250, 321, 371
Kzo9I	GATC	6 cut(s)	62, 84, 736, 774, 805, 914
LguI	GCTCTTC	2 cut(s)	493, 652
LmnI	GCTCC	3 cut(s)	47, 59, 255
Lsp1109I	GCAGC	4 cut(s)	353, 477, 543, 826
MaeI	CTAG	1 cut(s)	648
MaeII	ACGT	2 cut(s)	274, 619
MaeIII	GTNAC	1 cut(s)	834
MalI	GATC	6 cut(s)	64, 86, 738, 776, 807, 916
MboI	GATC	6 cut(s)	62, 84, 736, 774, 805, 914
MflI	RGATCY	2 cut(s)	805, 914
MhlI	GDGCHC	1 cut(s)	668
MlsI	TGGCCA	1 cut(s)	312
MluCI	AATT	2 cut(s)	264, 841
MluNI	TGGCCA	1 cut(s)	312
MnlI	CCTC	8 cut(s)	55, 150, 178, 333, 340, 544, 636, 865
Mox20I	TGGCCA	1 cut(s)	312
MscI	TGGCCA	1 cut(s)	312
MseI	TTAA	3 cut(s)	291, 300, 347
Msp20I	TGGCCA	1 cut(s)	312
MspI	CCGG	1 cut(s)	652
MspR9I	CCNGG	1 cut(s)	803
MvaI	CCWGG	1 cut(s)	803
MwoI	GCNNNNNNNGC	4 cut(s)	124, 145, 318, 820
NdeII	GATC	6 cut(s)	62, 84, 736, 774, 805, 914
NlaIII	CATG	4 cut(s)	37, 250, 321, 371
NlaIV	GGNNCC	1 cut(s)	55
NmeAIII	GCCGAG	1 cut(s)	486
NmuCI	GTSAC	1 cut(s)	834
NspI	RCATGY	1 cut(s)	321
PaeR7I	CTCGAG	1 cut(s)	809
PaqCI	CACCTGC	1 cut(s)	139
PciSI	GCTCTTC	2 cut(s)	493, 652
PcsI	WCGNNNNNNNCGW	3 cut(s)	616, 628, 737
PfeI	GAWTC	3 cut(s)	12, 37, 596
PflFI	GACNNNGTC	1 cut(s)	621
PkrI	GCNGC	4 cut(s)	343, 467, 533, 816
Psp124BI	GAGCTC	1 cut(s)	668
Psp1406I	AACGTT	1 cut(s)	274
Psp6I	CCWGG	1 cut(s)	801
PspGI	CCWGG	1 cut(s)	801
PspN4I	GGNNCC	1 cut(s)	55
PsuI	RGATCY	2 cut(s)	805, 914
PsyI	GACNNNGTC	1 cut(s)	621
RsaI	GTAC	2 cut(s)	646, 743
RsaNI	GTAC	2 cut(s)	645, 742
SacI	GAGCTC	1 cut(s)	668
SapI	GCTCTTC	2 cut(s)	493, 652
SaqAI	TTAA	3 cut(s)	291, 300, 347
SatI	GCNGC	4 cut(s)	342, 466, 532, 815
Sau3AI	GATC	6 cut(s)	62, 84, 736, 774, 805, 914
ScaI	AGTACT	1 cut(s)	646
ScrFI	CCNGG	1 cut(s)	803
SduI	GDGCHC	1 cut(s)	668
Sfr274I	CTCGAG	1 cut(s)	809
SlaI	CTCGAG	1 cut(s)	809
SmlI	CTYRAG	3 cut(s)	20, 809, 869
SmoI	CTYRAG	3 cut(s)	20, 809, 869
Sse9I	AATT	2 cut(s)	264, 841
SsiI	CCGC	1 cut(s)	716
SspMI	CTAG	1 cut(s)	648
SstI	GAGCTC	1 cut(s)	668
StyD4I	CCNGG	1 cut(s)	801
TaaI	ACNGT	2 cut(s)	224, 644
TaiI	ACGT	2 cut(s)	277, 622
TaqI	TCGA	5 cut(s)	157, 527, 610, 731, 810
TasI	AATT	2 cut(s)	264, 841
TatI	WGTACW	1 cut(s)	644
TfiI	GAWTC	3 cut(s)	12, 37, 596
Tru1I	TTAA	3 cut(s)	291, 300, 347
Tru9I	TTAA	3 cut(s)	291, 300, 347
TscAI	CASTG	5 cut(s)	102, 227, 830, 843, 886
TseFI	GTSAC	1 cut(s)	834
TseI	GCWGC	4 cut(s)	341, 465, 531, 814
Tsp45I	GTSAC	1 cut(s)	834
TspDTI	ATGAA	2 cut(s)	588, 842
TspGWI	ACGGA	2 cut(s)	651, 729
TspRI	CASTG	5 cut(s)	102, 227, 830, 843, 886
Tth111I	GACNNNGTC	1 cut(s)	621
XapI	RAATTY	2 cut(s)	264, 841
XceI	RCATGY	1 cut(s)	321
XhoI	CTCGAG	1 cut(s)	809
XspI	CTAG	1 cut(s)	648
ZraI	GACGTC	1 cut(s)	620
ZrmI	AGTACT	1 cut(s)	646

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.