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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G24630 AT3G24630 |
| malus_domestica | MD00G1028300.v1.1 MD02G1039400.v1.1 MD15G1182400.v1.1 |
| prunus_persica | Prupe.7G233100_v2.0.a1 Prupe.7G233100_v2.0.a1 Prupe.7G233100_v2.0.a1 Prupe.7G233100_v2.0.a1 Prupe.7G233100_v2.0.a1 Prupe.7G233100_v2.0.a1 |
| pyrus_communis | pycom02g03210 pycom02g05190 pycom02g05210 pycom15g16470 |
| rosa_chinensis | RchiOBHm_Chr2g0090061 |
| rosa_laevigata | RLG00000016082 |
| rosa_roxburghii | Rroxscaffold_2G00151430 |
| rosa_rugosa | Rorug02G0005000 |
| rosa_samantha | Rh2AG050700 Rh2BG049300 Rh2CG051500 Rh2DG050900 |
| rosa_wichuraiana | Rw2G003990 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 1145, 1284 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 1711 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 1378, 2047 |
| AccBSI | CCGCTC | 1 cut(s) | 1729 |
| AciI | CCGC | 3 cut(s) | 819, 1469, 1729 |
| AclI | AACGTT | 2 cut(s) | 1693, 2045 |
| AclWI | GGATC | 8 cut(s) | 83, 223, 1154, 1501, 1514, 1636, 1912, 2345 |
| AcoI | YGGCCR | 1 cut(s) | 2038 |
| AcsI | RAATTY | 4 cut(s) | 24, 560, 1531, 2292 |
| AcuI | CTGAAG | 2 cut(s) | 1416, 1935 |
| AfaI | GTAC | 5 cut(s) | 65, 446, 607, 860, 1140 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 44, 868, 1324, 1378, 1728, 2047 |
| AflII | CTTAAG | 1 cut(s) | 617 |
| AflIII | ACRYGT | 1 cut(s) | 2273 |
| AhlI | ACTAGT | 1 cut(s) | 773 |
| Alw21I | GWGCWC | 4 cut(s) | 245, 298, 391, 2016 |
| Alw26I | GTCTC | 6 cut(s) | 82, 411, 503, 627, 1013, 1581 |
| Alw44I | GTGCAC | 1 cut(s) | 241 |
| AlwI | GGATC | 8 cut(s) | 83, 223, 1154, 1501, 1514, 1636, 1912, 2345 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 304, 655 |
| AoxI | GGCC | 6 cut(s) | 46, 820, 870, 944, 1148, 2038 |
| ApaLI | GTGCAC | 1 cut(s) | 241 |
| ApeKI | GCWGC | 1 cut(s) | 352 |
| ApoI | RAATTY | 4 cut(s) | 24, 560, 1531, 2292 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 2437, 2469 |
| AspA2I | CCTAGG | 1 cut(s) | 572 |
| AspS9I | GGNCC | 3 cut(s) | 327, 821, 999 |
| AsuHPI | GGTGA | 7 cut(s) | 637, 911, 964, 1527, 1528, 1621, 2384 |
| AvaII | GGWCC | 2 cut(s) | 327, 999 |
| AvrII | CCTAGG | 1 cut(s) | 572 |
| BaeGI | GKGCMC | 1 cut(s) | 245 |
| BalI | TGGCCA | 1 cut(s) | 2040 |
| BamHI | GGATCC | 1 cut(s) | 1506 |
| BanII | GRGCYC | 3 cut(s) | 298, 391, 1970 |
| BbsI | GAAGAC | 2 cut(s) | 585, 2197 |
| Bbv12I | GWGCWC | 4 cut(s) | 245, 298, 391, 2016 |
| BbvI | GCAGC | 1 cut(s) | 364 |
| BceAI | ACGGC | 1 cut(s) | 61 |
| BclI | TGATCA | 2 cut(s) | 627, 985 |
| BcoDI | GTCTC | 6 cut(s) | 82, 411, 503, 627, 1013, 1581 |
| BcuI | ACTAGT | 1 cut(s) | 773 |
| BfaI | CTAG | 7 cut(s) | 288, 573, 597, 774, 912, 1982, 2306 |
| BfmI | CTRYAG | 4 cut(s) | 1455, 1707, 1773, 1995 |
| BfrI | CTTAAG | 1 cut(s) | 617 |
| BisI | GCNGC | 2 cut(s) | 353, 820 |
| BlnI | CCTAGG | 1 cut(s) | 572 |
| BlpI | GCTNAGC | 1 cut(s) | 2490 |
| BlsI | GCNGC | 2 cut(s) | 354, 821 |
| Bme18I | GGWCC | 2 cut(s) | 327, 999 |
| BmgT120I | GGNCC | 3 cut(s) | 327, 821, 999 |
| BmiI | GGNNCC | 2 cut(s) | 139, 1508 |
| BmsI | GCATC | 5 cut(s) | 446, 800, 1014, 1221, 1942 |
| BpiI | GAAGAC | 2 cut(s) | 585, 2197 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 946, 978 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1200 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 2490 |
| BpuEI | CTTGAG | 7 cut(s) | 24, 172, 730, 863, 1024, 1037, 1563 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1080 |
| BsaJI | CCNNGG | 1 cut(s) | 572 |
| BsaWI | WCCGGW | 1 cut(s) | 2183 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 719, 749 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 44, 868, 1324, 1378, 1728, 2047 |
| Bse1I | ACTGG | 4 cut(s) | 330, 660, 1760, 2523 |
| Bse3DI | GCAATG | 2 cut(s) | 1921, 2409 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1080 |
| BseDI | CCNNGG | 1 cut(s) | 572 |
| BseGI | GGATG | 5 cut(s) | 120, 1450, 2041, 2488, 2509 |
| BseJI | GATNNNNATC | 1 cut(s) | 1080 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 44, 868, 1324, 1378, 1728, 2047 |
| BseMI | GCAATG | 2 cut(s) | 1921, 2409 |
| BseNI | ACTGG | 4 cut(s) | 330, 660, 1760, 2523 |
| BseRI | GAGGAG | 6 cut(s) | 306, 789, 908, 2126, 2445, 2555 |
| BseSI | GKGCMC | 1 cut(s) | 245 |
| BseXI | GCAGC | 1 cut(s) | 364 |
| BsgI | GTGCAG | 2 cut(s) | 2248, 2446 |
| BshFI | GGCC | 6 cut(s) | 48, 822, 872, 946, 1150, 2040 |
| BsiHKAI | GWGCWC | 4 cut(s) | 245, 298, 391, 2016 |
| BsiSI | CCGG | 1 cut(s) | 2184 |
| BslFI | GGGAC | 2 cut(s) | 1251, 2458 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 44, 868, 1324, 1378, 1728, 2047 |
| BsmAI | GTCTC | 6 cut(s) | 82, 411, 503, 627, 1013, 1581 |
| BsmBI | CGTCTC | 1 cut(s) | 1013 |
| BsmFI | GGGAC | 2 cut(s) | 1251, 2458 |
| BsnI | GGCC | 6 cut(s) | 48, 822, 872, 946, 1150, 2040 |
| Bsp1286I | GDGCHC | 5 cut(s) | 245, 298, 391, 1970, 2016 |
| Bsp1407I | TGTACA | 1 cut(s) | 63 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 2490 |
| BspACI | CCGC | 3 cut(s) | 819, 1469, 1729 |
| BspANI | GGCC | 6 cut(s) | 48, 822, 872, 946, 1150, 2040 |
| BspHI | TCATGA | 1 cut(s) | 988 |
| BspLI | GGNNCC | 2 cut(s) | 139, 1508 |
| BspMAI | CTGCAG | 1 cut(s) | 1999 |
| BspPI | GGATC | 8 cut(s) | 83, 223, 1154, 1501, 1514, 1636, 1912, 2345 |
| BspTI | CTTAAG | 1 cut(s) | 617 |
| BsrBI | CCGCTC | 1 cut(s) | 1729 |
| BsrDI | GCAATG | 2 cut(s) | 1921, 2409 |
| BsrGI | TGTACA | 1 cut(s) | 63 |
| BsrI | ACTGG | 4 cut(s) | 330, 660, 1760, 2523 |
| BssECI | CCNNGG | 1 cut(s) | 572 |
| BssT1I | CCWWGG | 1 cut(s) | 572 |
| Bst4CI | ACNGT | 7 cut(s) | 444, 888, 1127, 1708, 2171, 2254, 2393 |
| Bst6I | CTCTTC | 5 cut(s) | 332, 849, 1158, 1251, 1878 |
| BstAFI | CTTAAG | 1 cut(s) | 617 |
| BstAUI | TGTACA | 1 cut(s) | 63 |
| BstC8I | GCNNGC | 3 cut(s) | 2363, 2367, 2400 |
| BstF5I | GGATG | 5 cut(s) | 120, 1450, 2041, 2488, 2509 |
| BstMAI | GTCTC | 6 cut(s) | 82, 411, 503, 627, 1013, 1581 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 1196, 1211, 1994, 2003 |
| BstNSI | RCATGY | 2 cut(s) | 2277, 2402 |
| BstSFI | CTRYAG | 4 cut(s) | 1455, 1707, 1773, 1995 |
| BstSLI | GKGCMC | 1 cut(s) | 245 |
| BstV1I | GCAGC | 1 cut(s) | 364 |
| BstV2I | GAAGAC | 2 cut(s) | 585, 2197 |
| BstX2I | RGATCY | 2 cut(s) | 1506, 1904 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 844 |
| BstYI | RGATCY | 2 cut(s) | 1506, 1904 |
| BsuRI | GGCC | 6 cut(s) | 48, 822, 872, 946, 1150, 2040 |
| BtsCI | GGATG | 5 cut(s) | 120, 1450, 2041, 2488, 2509 |
| BtsIMutI | CAGTG | 1 cut(s) | 337 |
| Cac8I | GCNNGC | 3 cut(s) | 2363, 2367, 2400 |
| CaiI | CAGNNNCTG | 2 cut(s) | 304, 655 |
| CciI | TCATGA | 1 cut(s) | 988 |
| Cfr13I | GGNCC | 3 cut(s) | 327, 821, 999 |
| CseI | GACGC | 2 cut(s) | 1859, 1994 |
| Csp6I | GTAC | 5 cut(s) | 64, 445, 606, 859, 1139 |
| CviQI | GTAC | 5 cut(s) | 64, 445, 606, 859, 1139 |
| DraI | TTTAAA | 1 cut(s) | 1033 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 1711 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 1711 |
| EaeI | YGGCCR | 1 cut(s) | 2038 |
| Eam1104I | CTCTTC | 5 cut(s) | 332, 849, 1158, 1251, 1878 |
| EarI | CTCTTC | 5 cut(s) | 332, 849, 1158, 1251, 1878 |
| Ecl136II | GAGCTC | 2 cut(s) | 296, 389 |
| Eco130I | CCWWGG | 1 cut(s) | 572 |
| Eco147I | AGGCCT | 1 cut(s) | 1150 |
| Eco24I | GRGCYC | 3 cut(s) | 298, 391, 1970 |
| Eco32I | GATATC | 1 cut(s) | 205 |
| Eco47I | GGWCC | 2 cut(s) | 327, 999 |
| Eco53kI | GAGCTC | 2 cut(s) | 296, 389 |
| Eco57I | CTGAAG | 2 cut(s) | 1416, 1935 |
| EcoICRI | GAGCTC | 2 cut(s) | 296, 389 |
| EcoO109I | RGGNCCY | 1 cut(s) | 999 |
| EcoRI | GAATTC | 2 cut(s) | 24, 1531 |
| EcoRV | GATATC | 1 cut(s) | 205 |
| EcoT14I | CCWWGG | 1 cut(s) | 572 |
| EcoT38I | GRGCYC | 3 cut(s) | 298, 391, 1970 |
| ErhI | CCWWGG | 1 cut(s) | 572 |
| Esp3I | CGTCTC | 1 cut(s) | 1013 |
| FaqI | GGGAC | 2 cut(s) | 1251, 2458 |
| FbaI | TGATCA | 2 cut(s) | 627, 985 |
| Fnu4HI | GCNGC | 2 cut(s) | 353, 820 |
| FokI | GGATG | 5 cut(s) | 127, 1437, 2048, 2495, 2516 |
| FriOI | GRGCYC | 3 cut(s) | 298, 391, 1970 |
| Fsp4HI | GCNGC | 2 cut(s) | 353, 820 |
| FspBI | CTAG | 7 cut(s) | 288, 573, 597, 774, 912, 1982, 2306 |
| GluI | GCNGC | 2 cut(s) | 353, 820 |
| HaeIII | GGCC | 6 cut(s) | 48, 822, 872, 946, 1150, 2040 |
| HapII | CCGG | 1 cut(s) | 2184 |
| HgaI | GACGC | 2 cut(s) | 1859, 1994 |
| HincII | GTYRAC | 1 cut(s) | 1348 |
| HindII | GTYRAC | 1 cut(s) | 1348 |
| HindIII | AAGCTT | 4 cut(s) | 1212, 1443, 2004, 2363 |
| HpaI | GTTAAC | 1 cut(s) | 1348 |
| HpaII | CCGG | 1 cut(s) | 2184 |
| HphI | GGTGA | 7 cut(s) | 637, 911, 964, 1527, 1528, 1621, 2384 |
| Hpy166II | GTNNAC | 5 cut(s) | 64, 243, 1130, 1348, 2216 |
| Hpy8I | GTNNAC | 5 cut(s) | 64, 243, 1130, 1348, 2216 |
| HpyAV | CCTTC | 8 cut(s) | 616, 802, 943, 1283, 1489, 1744, 1910, 2390 |
| HpyCH4III | ACNGT | 7 cut(s) | 444, 888, 1127, 1708, 2171, 2254, 2393 |
| HpyCH4IV | ACGT | 3 cut(s) | 363, 1693, 2045 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 1196, 1211, 1994, 2003 |
| HpySE526I | ACGT | 3 cut(s) | 363, 1693, 2045 |
| Ksp22I | TGATCA | 2 cut(s) | 627, 985 |
| KspAI | GTTAAC | 1 cut(s) | 1348 |
| LmnI | GCTCC | 6 cut(s) | 293, 386, 802, 1292, 1871, 2113 |
| Lsp1109I | GCAGC | 1 cut(s) | 364 |
| LweI | GCATC | 5 cut(s) | 446, 800, 1014, 1221, 1942 |
| MaeI | CTAG | 7 cut(s) | 288, 573, 597, 774, 912, 1982, 2306 |
| MaeII | ACGT | 3 cut(s) | 363, 1693, 2045 |
| MaeIII | GTNAC | 7 cut(s) | 553, 776, 1516, 1789, 1817, 1847, 2330 |
| MbiI | CCGCTC | 1 cut(s) | 1729 |
| MfeI | CAATTG | 1 cut(s) | 1485 |
| MflI | RGATCY | 2 cut(s) | 1506, 1904 |
| MhlI | GDGCHC | 5 cut(s) | 245, 298, 391, 1970, 2016 |
| MlsI | TGGCCA | 1 cut(s) | 2040 |
| MluNI | TGGCCA | 1 cut(s) | 2040 |
| MlyI | GAGTC | 5 cut(s) | 413, 505, 722, 773, 2110 |
| MmeI | TCCRAC | 6 cut(s) | 870, 1329, 1893, 2028, 2388, 2441 |
| Mox20I | TGGCCA | 1 cut(s) | 2040 |
| MscI | TGGCCA | 1 cut(s) | 2040 |
| MseI | TTAA | 5 cut(s) | 618, 1032, 1347, 1745, 2127 |
| MslI | CAYNNNNRTG | 1 cut(s) | 549 |
| Msp20I | TGGCCA | 1 cut(s) | 2040 |
| MspA1I | CMGCKG | 1 cut(s) | 59 |
| MspCI | CTTAAG | 1 cut(s) | 617 |
| MspI | CCGG | 1 cut(s) | 2184 |
| MunI | CAATTG | 1 cut(s) | 1485 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 1196, 1211, 1994, 2003 |
| NlaIV | GGNNCC | 2 cut(s) | 139, 1508 |
| NmuCI | GTSAC | 5 cut(s) | 553, 776, 1516, 1817, 1847 |
| NspI | RCATGY | 2 cut(s) | 2277, 2402 |
| PaeI | GCATGC | 1 cut(s) | 2402 |
| PagI | TCATGA | 1 cut(s) | 988 |
| PceI | AGGCCT | 1 cut(s) | 1150 |
| PciI | ACATGT | 1 cut(s) | 2273 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 1378, 2047 |
| PkrI | GCNGC | 2 cut(s) | 354, 821 |
| PleI | GAGTC | 5 cut(s) | 412, 505, 722, 773, 2109 |
| PpsI | GAGTC | 5 cut(s) | 412, 505, 722, 773, 2109 |
| PpuMI | RGGWCCY | 1 cut(s) | 999 |
| PscI | ACATGT | 1 cut(s) | 2273 |
| PsiI | TTATAA | 2 cut(s) | 1145, 1284 |
| Psp124BI | GAGCTC | 2 cut(s) | 298, 391 |
| Psp1406I | AACGTT | 2 cut(s) | 1693, 2045 |
| Psp5II | RGGWCCY | 1 cut(s) | 999 |
| PspN4I | GGNNCC | 2 cut(s) | 139, 1508 |
| PspPI | GGNCC | 3 cut(s) | 327, 821, 999 |
| PspPPI | RGGWCCY | 1 cut(s) | 999 |
| PstI | CTGCAG | 1 cut(s) | 1999 |
| PstNI | CAGNNNCTG | 2 cut(s) | 304, 655 |
| PsuI | RGATCY | 2 cut(s) | 1506, 1904 |
| PvuII | CAGCTG | 1 cut(s) | 59 |
| RsaI | GTAC | 5 cut(s) | 65, 446, 607, 860, 1140 |
| RsaNI | GTAC | 5 cut(s) | 64, 445, 606, 859, 1139 |
| RseI | CAYNNNNRTG | 1 cut(s) | 549 |
| SacI | GAGCTC | 2 cut(s) | 298, 391 |
| SaqAI | TTAA | 5 cut(s) | 618, 1032, 1347, 1745, 2127 |
| SatI | GCNGC | 2 cut(s) | 353, 820 |
| Sau96I | GGNCC | 3 cut(s) | 327, 821, 999 |
| SchI | GAGTC | 5 cut(s) | 413, 505, 722, 773, 2110 |
| SduI | GDGCHC | 5 cut(s) | 245, 298, 391, 1970, 2016 |
| SfaNI | GCATC | 5 cut(s) | 446, 800, 1014, 1221, 1942 |
| SfcI | CTRYAG | 4 cut(s) | 1455, 1707, 1773, 1995 |
| SinI | GGWCC | 2 cut(s) | 327, 999 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 549 |
| SmlI | CTYRAG | 8 cut(s) | 39, 187, 617, 745, 878, 1003, 1016, 1578 |
| SmoI | CTYRAG | 8 cut(s) | 39, 187, 617, 745, 878, 1003, 1016, 1578 |
| SpeI | ACTAGT | 1 cut(s) | 773 |
| SphI | GCATGC | 1 cut(s) | 2402 |
| SseBI | AGGCCT | 1 cut(s) | 1150 |
| SsiI | CCGC | 3 cut(s) | 819, 1469, 1729 |
| SspMI | CTAG | 7 cut(s) | 288, 573, 597, 774, 912, 1982, 2306 |
| SstI | GAGCTC | 2 cut(s) | 298, 391 |
| StuI | AGGCCT | 1 cut(s) | 1150 |
| StyI | CCWWGG | 1 cut(s) | 572 |
| TaaI | ACNGT | 7 cut(s) | 444, 888, 1127, 1708, 2171, 2254, 2393 |
| TaiI | ACGT | 3 cut(s) | 366, 1696, 2048 |
| TaqI | TCGA | 1 cut(s) | 2340 |
| TatI | WGTACW | 4 cut(s) | 63, 444, 605, 1138 |
| TauI | GCSGC | 1 cut(s) | 822 |
| Tru1I | TTAA | 5 cut(s) | 618, 1032, 1347, 1745, 2127 |
| Tru9I | TTAA | 5 cut(s) | 618, 1032, 1347, 1745, 2127 |
| TscAI | CASTG | 1 cut(s) | 337 |
| TseFI | GTSAC | 5 cut(s) | 553, 776, 1516, 1817, 1847 |
| TseI | GCWGC | 1 cut(s) | 352 |
| Tsp45I | GTSAC | 5 cut(s) | 553, 776, 1516, 1817, 1847 |
| TspDTI | ATGAA | 6 cut(s) | 708, 755, 1005, 1368, 1635, 2499 |
| TspRI | CASTG | 1 cut(s) | 337 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 1378, 2047 |
| Vha464I | CTTAAG | 1 cut(s) | 617 |
| VneI | GTGCAC | 1 cut(s) | 241 |
| VpaK11BI | GGWCC | 2 cut(s) | 327, 999 |
| XapI | RAATTY | 4 cut(s) | 24, 560, 1531, 2292 |
| XbaI | TCTAGA | 2 cut(s) | 287, 2305 |
| XceI | RCATGY | 2 cut(s) | 2277, 2402 |
| XmaJI | CCTAGG | 1 cut(s) | 572 |
| XspI | CTAG | 7 cut(s) | 288, 573, 597, 774, 912, 1982, 2306 |