Rw2G003990

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr2
OG0007913
Physical Location & Seq
Reverse (-)
3761667 .. 3765911
4245 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw2G003990.1

Sequence Viewer

Length: 2529 bp
ATGCCTCAGGACGGCCTAAAATCAGCTTTGTACAGATCATTCATCACATGTGACGATCCTAAAGGAGTTGTGGATTGTGGGATGATAATGAGGAGATCCAAAAGCAGCGGTGGTTCACAGATTATGGATAAGCAGAAGAAGATCGAAGTCCAAAGAAATTCGAAGAACTTAATTAGTACATCACCATCTTCATTGGGGTTGATCTCCCAAGAGGAGTTTCAGAGCTCTTCATCATCTTCTTCTTTTCAGCTCATGGAAGTTTCTAGAGGAGCTCAGAGGCTGAACCACATGATTGGTTCCTGGTCGAATGAGAAGAAGAGATTTGATCATGGCCAGTCTAAAGACATTGCAAAAGATTTGCTAAAAGGAGCGCTTGATTTGCAGGAGAGTCTTGTTATGCTTGGGAAGTTGCAAGAAGCTTCACAGTACATGAGTAACTTGAACAAAAAGCACATGGGACAGCCGGAAAGAGCTTACTCGAATCGATATGGAGATCAAGGTTATGTGAAGCCAAGGCTTTCTTCTGATGGATACTCTTCAAGGAATAGTAATGAGGAGCTTAAGAAGGTGATCAGAGACAGCCTTGTGAGGCAAAAATTGTTCGAAAATACAAGCACTGCTGAGAAGGGTTGTGCTTATTCTCCTCAAAGATATAGGGATTCATATTCAGACAGTACTCCTTCCACAAGCTCAAGCCAGTCTTCTATGTATCATAATTCTAGTGAGTATTCCAGCATTGCATCACAAAAGGCGAAAGGTCCAAGTCTGATTGCCAAACTCATGGGAATAGAAGAGTACCCTTTAAAATCTGTGCAGGAGGGTGAGAAGGTTTCAAAACAGCAGAGGCCTGCATTTGAAATTGATAGGCCAAAGGTGAGGATTGCATCTCAAAGTGTTGATCGAGAAAAGAGGACCTTAAAGGAAGTTCTTGACACGATGCGGTTTAAAGGGCTTCTGAGAAACAACTCTTTTGAAGAGCCCAAGTTTGAGATTCATCATTCCAATCAATTGGAATCGGAGAAAAGGTTCAATGGTGATAGTCCACCAATTGTGCTGATCAAGCCTATTTCTGTTGAATCCCCAGAAATGGAAGCAAATGCACCAATTGTTCGGGGAGAAGAAGCTTTCTACAACAGAAGGATGCTTAAGAAATTGAGATCAGAAGAAGCGGTTTCTCCCAAAACAGCGAGTGGTAAAGAGGGAGCTTTGAAGTCTGACAAAGTGCAGCGAAAACTTGAAGTAGAAGAGACATCAATTAGAAAGACTAGCAAAGAAGAAGGAGCTAAAAAGCATCGAGGGGCAGTGGACAAACATGGAGAAAAAGAAGTCAAGACGAAAGAAATGGCTTCGAGAAAGTTGAAAGCTTCTCAACCTGTAGTTCACAAGTCACAGAAGGAGGCAATTGACAAGAGGGTTGATGAGATCCAAAAGGTAGCTGCTGTTAACAGGAACTCAGCGGAGAAGGATAGAGTGATAGCTAAAACCGTGTCAAAGTCAAAGTCTCAAGATCAAGACATTGTGACATCTGCCAAGGCAAGAAAGCCTGAATCTGGATCAAACATCAAAAGGACTCCAGTTTCTCGACAACCAAGTATTGTGACAAGCACAAGTTCAAAACGTTCAACAGTACAGAATGCAGAGTGTACTTCCAGCGAACGCAGAAGGAATCATTTGAGGAAGGAAAAGCCAGTCAAGGAGCCTACAGGAGCTAAATCAGTTGCCAAAAATGTTGTGAGCGAAGAAATTGTCAGGAGAATTGATACCAGTGATAAAAGTGAGTCTTCTCTGATCAGCTCTGAAAATACGCCTATACTAACAAGCTCCAATACTGATTCTAGAGATCAACTCCTTAAAGAAGAGGAACAGGAAACCTATGGATCCCAGAGTGAAGGGCACTGCAATAGTTTCCAAAGTTCTCTTTCTGAAGCTACATCGGGGAGCTCCATGCAAGAAACAAACCCTGAAACTGCAGTAGAAGTTTCTGGAGACATCAGTCAGAGTGGAAAGGATGGCAAAACAGTCAGAAGTGGTGAAAATCTCAGAGAATTTCTTTTGAGTAATGCATCATTTCTGAGTCATGCCGAAGAGTATTTTGATCTTGATGTGAATGGCTCTACAATCTTACAAACATCTTCTGTCTCCAATTTCGGAGTGTCGAATTCAAGACTAGTTTTAGACTGTGCAAGTGAACTAGTTGAGTGCAAAATATTTCAAGCTTCACAAACAATTGATCCTCTGTCACTAACATTCAAAGGCAAGTCAAAAGTTTCCATATCGTTGGACAAGTTGGTGGAAGATATTTGGAATGGGATCGAGAATCTGAGAAGTTACAGCAAGCTTGCTGGTGATAACCTTCTTGCAGATAGTCTGTATGCAATGTTGGAGAGAGATGTAATGTGCAAAGGAGTAGGAAAAGGAACATGGGATTTGGGTTGGAGAAATGGATTTTCCGGGGATGAAGGTGAGCAAGTAGTGAGTGACATAGAGAGACTGATTTTCAATGGACTGATTGAGGAGGTCTTTGCATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF4378 VARLMGL

Protein Analysis

842

Amino Acids

93.58

Weight (kDa)

8.92

Isoelectric Point (pI)

54.47

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF4378 PF14309 717 - 839 8.1e-08 Domain of unknown function (DUF4378)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 4 cut(s) 108, 940, 1169, 1457
AclI AACGTT 1 cut(s) 1618
AclWI GGATC 8 cut(s) 50, 90, 1417, 1561, 1872, 1885, 2225, 2318
AcoI YGGCCR 1 cut(s) 331
AcsI RAATTY 3 cut(s) 157, 2045, 2158
AcuI CTGAAG 1 cut(s) 1944
AfaI GTAC 7 cut(s) 32, 178, 428, 676, 797, 1629, 1645
AfeI AGCGCT 1 cut(s) 372
AfiI CCNNNNNNNGG 3 cut(s) 11, 1087, 1550
AflII CTTAAG 2 cut(s) 560, 1145
AflIII ACRYGT 1 cut(s) 47
AhlI ACTAGT 2 cut(s) 2167, 2191
AjnI CCWGG 1 cut(s) 299
AjuI GAANNNNNNNTTGG 4 cut(s) 201, 233, 505, 537
AloI GAACNNNNNNTCC 2 cut(s) 1010, 1042
Alw21I GWGCWC 3 cut(s) 227, 274, 1943
Alw26I GTCTC 6 cut(s) 570, 1241, 1506, 1980, 2143, 2482
AlwI GGATC 8 cut(s) 50, 90, 1417, 1561, 1872, 1885, 2225, 2318
AlwNI CAGNNNCTG 1 cut(s) 280
Aor51HI AGCGCT 1 cut(s) 372
AoxI GGCC 4 cut(s) 13, 331, 845, 866
ApeKI GCWGC 3 cut(s) 105, 1225, 1436
ApoI RAATTY 3 cut(s) 157, 2045, 2158
ArsI GACNNNNNNTTYG 4 cut(s) 1484, 1516, 1731, 1763
Asp700I GAANNNNTTC 1 cut(s) 1025
AspLEI GCGC 1 cut(s) 373
AspS9I GGNCC 2 cut(s) 758, 912
AsuC2I CCSGG 1 cut(s) 2452
AsuHPI GGTGA 8 cut(s) 174, 580, 833, 886, 1046, 2042, 2357, 2474
AsuII TTCGAA 2 cut(s) 161, 603
AvaII GGWCC 2 cut(s) 758, 912
AxyI CCTNAGG 1 cut(s) 6
BaeGI GKGCMC 1 cut(s) 1896
BalI TGGCCA 1 cut(s) 333
BamHI GGATCC 1 cut(s) 1877
BanII GRGCYC 4 cut(s) 227, 274, 981, 1943
BbsI GAAGAC 2 cut(s) 693, 1773
Bbv12I GWGCWC 3 cut(s) 227, 274, 1943
BbvI GCAGC 3 cut(s) 117, 1237, 1423
BccI CCATC 3 cut(s) 193, 521, 2003
BceAI ACGGC 1 cut(s) 28
BciT130I CCWGG 1 cut(s) 301
BciVI GTATCC 1 cut(s) 524
BclI TGATCA 4 cut(s) 325, 570, 1056, 1788
BcnI CCSGG 1 cut(s) 2452
BcoDI GTCTC 6 cut(s) 570, 1241, 1506, 1980, 2143, 2482
BcuI ACTAGT 2 cut(s) 2167, 2191
BfaI CTAG 6 cut(s) 264, 720, 1266, 1836, 2168, 2192
BfmI CTRYAG 3 cut(s) 1374, 1701, 1968
BfoI RGCGCY 1 cut(s) 374
BfrI CTTAAG 2 cut(s) 560, 1145
BfuI GTATCC 1 cut(s) 524
BisI GCNGC 3 cut(s) 106, 1226, 1437
BlsI GCNGC 3 cut(s) 107, 1227, 1438
BmcAI AGTACT 1 cut(s) 676
Bme1390I CCNGG 2 cut(s) 301, 2452
Bme18I GGWCC 2 cut(s) 758, 912
BmgT120I GGNCC 2 cut(s) 758, 912
BmiI GGNNCC 3 cut(s) 298, 1698, 1879
BmrFI CCNGG 2 cut(s) 301, 2452
BmsI GCATC 6 cut(s) 749, 893, 927, 1131, 1300, 2072
BoxI GACNNNNGTC 1 cut(s) 1992
BpiI GAAGAC 2 cut(s) 693, 1773
BplI GAGNNNNNCTC 2 cut(s) 1830, 1862
BpmI CTGGAG 2 cut(s) 1557, 2004
Bpu14I TTCGAA 2 cut(s) 161, 603
BpuEI CTTGAG 2 cut(s) 676, 1488
BpuMI CCSGG 1 cut(s) 2452
Bsa29I ATCGAT 1 cut(s) 484
BsaJI CCNNGG 3 cut(s) 512, 1530, 2451
BsaXI ACNNNNNCTCC 2 cut(s) 1010, 1040
Bsc4I CCNNNNNNNGG 3 cut(s) 11, 1087, 1550
Bse1I ACTGG 5 cut(s) 334, 697, 1574, 1688, 1764
Bse21I CCTNAGG 1 cut(s) 6
Bse3DI GCAATG 3 cut(s) 345, 735, 2382
BseBI CCWGG 1 cut(s) 301
BseCI ATCGAT 1 cut(s) 484
BseDI CCNNGG 3 cut(s) 512, 1530, 2451
BseGI GGATG 4 cut(s) 87, 1146, 2014, 2461
BseLI CCNNNNNNNGG 3 cut(s) 11, 1087, 1550
BseMI GCAATG 3 cut(s) 345, 735, 2382
BseMII CTCAG 8 cut(s) 20, 287, 612, 947, 1467, 2053, 2063, 2312
BseNI ACTGG 5 cut(s) 334, 697, 1574, 1688, 1764
BseRI GAGGAG 6 cut(s) 106, 227, 282, 569, 633, 2528
BseSI GKGCMC 1 cut(s) 1896
BseXI GCAGC 3 cut(s) 117, 1237, 1423
BsgI GTGCAG 2 cut(s) 833, 1244
BshFI GGCC 4 cut(s) 15, 333, 847, 868
BshVI ATCGAT 1 cut(s) 484
BsiHKAI GWGCWC 3 cut(s) 227, 274, 1943
BsiSI CCGG 2 cut(s) 464, 2451
BslFI GGGAC 1 cut(s) 471
BslI CCNNNNNNNGG 3 cut(s) 11, 1087, 1550
BsmAI GTCTC 6 cut(s) 570, 1241, 1506, 1980, 2143, 2482
BsmFI GGGAC 1 cut(s) 471
BsmI GAATGC 1 cut(s) 1639
BsnI GGCC 4 cut(s) 15, 333, 847, 868
Bsp119I TTCGAA 2 cut(s) 161, 603
Bsp1286I GDGCHC 5 cut(s) 227, 274, 981, 1896, 1943
Bsp1407I TGTACA 1 cut(s) 30
BspACI CCGC 4 cut(s) 108, 940, 1169, 1457
BspANI GGCC 4 cut(s) 15, 333, 847, 868
BspCNI CTCAG 8 cut(s) 19, 286, 613, 948, 1466, 2052, 2064, 2313
BspDI ATCGAT 1 cut(s) 484
BspLI GGNNCC 3 cut(s) 298, 1698, 1879
BspMAI CTGCAG 1 cut(s) 1972
BspPI GGATC 8 cut(s) 50, 90, 1417, 1561, 1872, 1885, 2225, 2318
BspQI GCTCTTC 2 cut(s) 232, 969
BspT104I TTCGAA 2 cut(s) 161, 603
BspTI CTTAAG 2 cut(s) 560, 1145
BsrDI GCAATG 3 cut(s) 345, 735, 2382
BsrGI TGTACA 1 cut(s) 30
BsrI ACTGG 5 cut(s) 334, 697, 1574, 1688, 1764
BssECI CCNNGG 3 cut(s) 512, 1530, 2451
BssT1I CCWWGG 2 cut(s) 512, 1530
Bst2UI CCWGG 1 cut(s) 301
Bst4CI ACNGT 6 cut(s) 426, 674, 1486, 1627, 2020, 2180
Bst6I CTCTTC 8 cut(s) 232, 311, 541, 786, 969, 1239, 1851, 2079
BstAFI CTTAAG 2 cut(s) 560, 1145
BstAUI TGTACA 1 cut(s) 30
BstBI TTCGAA 2 cut(s) 161, 603
BstC8I GCNNGC 3 cut(s) 849, 2336, 2340
BstDEI CTNAG 8 cut(s) 6, 273, 621, 956, 1453, 2039, 2072, 2321
BstF5I GGATG 4 cut(s) 87, 1146, 2014, 2461
BstH2I RGCGCY 1 cut(s) 374
BstHHI GCGC 1 cut(s) 373
BstMAI GTCTC 6 cut(s) 570, 1241, 1506, 1980, 2143, 2482
BstMWI GCNNNNNNNGC 2 cut(s) 379, 1060
BstNI CCWGG 1 cut(s) 301
BstNSI RCATGY 1 cut(s) 51
BstPAI GACNNNNGTC 1 cut(s) 1992
BstSCI CCNGG 2 cut(s) 299, 2450
BstSFI CTRYAG 3 cut(s) 1374, 1701, 1968
BstSLI GKGCMC 1 cut(s) 1896
BstV1I GCAGC 3 cut(s) 117, 1237, 1423
BstV2I GAAGAC 2 cut(s) 693, 1773
BstX2I RGATCY 3 cut(s) 95, 1422, 1877
BstXI CCANNNNNNTGG 4 cut(s) 293, 781, 1009, 2278
BstYI RGATCY 3 cut(s) 95, 1422, 1877
Bsu15I ATCGAT 1 cut(s) 484
Bsu36I CCTNAGG 1 cut(s) 6
BsuI GTATCC 1 cut(s) 524
BsuRI GGCC 4 cut(s) 15, 333, 847, 868
BsuTUI ATCGAT 1 cut(s) 484
BtsCI GGATG 4 cut(s) 87, 1146, 2014, 2461
BtsI GCAGTG 3 cut(s) 615, 1308, 1894
BtsIMutI CAGTG 4 cut(s) 615, 1308, 1771, 1894
Cac8I GCNNGC 3 cut(s) 849, 2336, 2340
CaiI CAGNNNCTG 1 cut(s) 280
CfoI GCGC 1 cut(s) 373
Cfr13I GGNCC 2 cut(s) 758, 912
ClaI ATCGAT 1 cut(s) 484
Csp6I GTAC 7 cut(s) 31, 177, 427, 675, 796, 1628, 1644
CviQI GTAC 7 cut(s) 31, 177, 427, 675, 796, 1628, 1644
DdeI CTNAG 8 cut(s) 6, 273, 621, 956, 1453, 2039, 2072, 2321
DraI TTTAAA 2 cut(s) 804, 946
EaeI YGGCCR 1 cut(s) 331
Eam1104I CTCTTC 8 cut(s) 232, 311, 541, 786, 969, 1239, 1851, 2079
EarI CTCTTC 8 cut(s) 232, 311, 541, 786, 969, 1239, 1851, 2079
Ecl136II GAGCTC 3 cut(s) 225, 272, 1941
Eco130I CCWWGG 2 cut(s) 512, 1530
Eco147I AGGCCT 1 cut(s) 847
Eco24I GRGCYC 4 cut(s) 227, 274, 981, 1943
Eco47I GGWCC 2 cut(s) 758, 912
Eco47III AGCGCT 1 cut(s) 372
Eco53kI GAGCTC 3 cut(s) 225, 272, 1941
Eco57I CTGAAG 1 cut(s) 1944
Eco81I CCTNAGG 1 cut(s) 6
EcoICRI GAGCTC 3 cut(s) 225, 272, 1941
EcoO109I RGGNCCY 1 cut(s) 912
EcoRI GAATTC 1 cut(s) 2158
EcoRII CCWGG 1 cut(s) 299
EcoT14I CCWWGG 2 cut(s) 512, 1530
EcoT22I ATGCAT 1 cut(s) 2065
EcoT38I GRGCYC 4 cut(s) 227, 274, 981, 1943
ErhI CCWWGG 2 cut(s) 512, 1530
FaqI GGGAC 1 cut(s) 471
FbaI TGATCA 4 cut(s) 325, 570, 1056, 1788
Fnu4HI GCNGC 3 cut(s) 106, 1226, 1437
FokI GGATG 4 cut(s) 94, 1153, 2021, 2468
FriOI GRGCYC 4 cut(s) 227, 274, 981, 1943
Fsp4HI GCNGC 3 cut(s) 106, 1226, 1437
FspBI CTAG 6 cut(s) 264, 720, 1266, 1836, 2168, 2192
GlaI GCGC 1 cut(s) 372
GluI GCNGC 3 cut(s) 106, 1226, 1437
GsuI CTGGAG 2 cut(s) 1557, 2004
HaeII RGCGCY 1 cut(s) 374
HaeIII GGCC 4 cut(s) 15, 333, 847, 868
HapII CCGG 2 cut(s) 464, 2451
HhaI GCGC 1 cut(s) 373
Hin6I GCGC 1 cut(s) 371
HinP1I GCGC 1 cut(s) 371
HincII GTYRAC 1 cut(s) 1444
HindII GTYRAC 1 cut(s) 1444
HindIII AAGCTT 5 cut(s) 417, 1122, 1362, 2214, 2336
HpaI GTTAAC 1 cut(s) 1444
HpaII CCGG 2 cut(s) 464, 2451
HphI GGTGA 8 cut(s) 174, 580, 833, 886, 1046, 2042, 2357, 2474
Hpy166II GTNNAC 7 cut(s) 116, 1043, 1306, 1381, 1444, 1644, 2189
Hpy8I GTNNAC 7 cut(s) 116, 1043, 1306, 1381, 1444, 1644, 2189
HpyCH4III ACNGT 6 cut(s) 426, 674, 1486, 1627, 2020, 2180
HpyCH4IV ACGT 1 cut(s) 1618
HpyF10VI GCNNNNNNNGC 2 cut(s) 379, 1060
HpyF3I CTNAG 8 cut(s) 6, 273, 621, 956, 1453, 2039, 2072, 2321
HpySE526I ACGT 1 cut(s) 1618
HspAI GCGC 1 cut(s) 371
Ksp22I TGATCA 4 cut(s) 325, 570, 1056, 1788
KspAI GTTAAC 1 cut(s) 1444
LguI GCTCTTC 2 cut(s) 232, 969
Lsp1109I GCAGC 3 cut(s) 117, 1237, 1423
LweI GCATC 6 cut(s) 749, 893, 927, 1131, 1300, 2072
MaeI CTAG 6 cut(s) 264, 720, 1266, 1836, 2168, 2192
MaeII ACGT 1 cut(s) 1618
MaeIII GTNAC 8 cut(s) 50, 434, 1386, 1519, 1597, 2238, 2327, 2477
MfeI CAATTG 5 cut(s) 1007, 1047, 1104, 1401, 2226
MflI RGATCY 3 cut(s) 95, 1422, 1877
MhlI GDGCHC 5 cut(s) 227, 274, 981, 1896, 1943
MlsI TGGCCA 1 cut(s) 333
MluNI TGGCCA 1 cut(s) 333
MlyI GAGTC 4 cut(s) 397, 1564, 1787, 2083
MmeI TCCRAC 3 cut(s) 2259, 2361, 2414
Mox20I TGGCCA 1 cut(s) 333
Mph1103I ATGCAT 1 cut(s) 2065
MroXI GAANNNNTTC 1 cut(s) 1025
MscI TGGCCA 1 cut(s) 333
MseI TTAA 8 cut(s) 170, 561, 803, 917, 945, 1146, 1443, 1851
Msp20I TGGCCA 1 cut(s) 333
MspA1I CMGCKG 2 cut(s) 108, 1457
MspCI CTTAAG 2 cut(s) 560, 1145
MspI CCGG 2 cut(s) 464, 2451
MspR9I CCNGG 2 cut(s) 301, 2452
MunI CAATTG 5 cut(s) 1007, 1047, 1104, 1401, 2226
Mva1269I GAATGC 1 cut(s) 1639
MvaI CCWGG 1 cut(s) 301
MwoI GCNNNNNNNGC 2 cut(s) 379, 1060
NciI CCSGG 1 cut(s) 2452
NlaIV GGNNCC 3 cut(s) 298, 1698, 1879
NmuCI GTSAC 6 cut(s) 50, 1386, 1519, 1597, 2238, 2477
NsiI ATGCAT 1 cut(s) 2065
NspI RCATGY 1 cut(s) 51
NspV TTCGAA 2 cut(s) 161, 603
PceI AGGCCT 1 cut(s) 847
PciI ACATGT 1 cut(s) 47
PciSI GCTCTTC 2 cut(s) 232, 969
PctI GAATGC 1 cut(s) 1639
PdmI GAANNNNTTC 1 cut(s) 1025
PfeI GAWTC 9 cut(s) 481, 659, 991, 1013, 1076, 1547, 1666, 1832, 2317
PkrI GCNGC 3 cut(s) 107, 1227, 1438
PleI GAGTC 4 cut(s) 396, 1564, 1786, 2082
PpsI GAGTC 4 cut(s) 396, 1564, 1786, 2082
PpuMI RGGWCCY 1 cut(s) 912
PscI ACATGT 1 cut(s) 47
PshAI GACNNNNGTC 1 cut(s) 1992
Psp124BI GAGCTC 3 cut(s) 227, 274, 1943
Psp1406I AACGTT 1 cut(s) 1618
Psp5II RGGWCCY 1 cut(s) 912
Psp6I CCWGG 1 cut(s) 299
PspGI CCWGG 1 cut(s) 299
PspN4I GGNNCC 3 cut(s) 298, 1698, 1879
PspPI GGNCC 2 cut(s) 758, 912
PspPPI RGGWCCY 1 cut(s) 912
PstI CTGCAG 1 cut(s) 1972
PstNI CAGNNNCTG 1 cut(s) 280
PsuI RGATCY 3 cut(s) 95, 1422, 1877
RsaI GTAC 7 cut(s) 32, 178, 428, 676, 797, 1629, 1645
RsaNI GTAC 7 cut(s) 31, 177, 427, 675, 796, 1628, 1644
SacI GAGCTC 3 cut(s) 227, 274, 1943
SapI GCTCTTC 2 cut(s) 232, 969
SaqAI TTAA 8 cut(s) 170, 561, 803, 917, 945, 1146, 1443, 1851
SatI GCNGC 3 cut(s) 106, 1226, 1437
Sau96I GGNCC 2 cut(s) 758, 912
ScaI AGTACT 1 cut(s) 676
SchI GAGTC 4 cut(s) 397, 1564, 1787, 2083
ScrFI CCNGG 2 cut(s) 301, 2452
SduI GDGCHC 5 cut(s) 227, 274, 981, 1896, 1943
SfaNI GCATC 6 cut(s) 749, 893, 927, 1131, 1300, 2072
SfcI CTRYAG 3 cut(s) 1374, 1701, 1968
SfuI TTCGAA 2 cut(s) 161, 603
SinI GGWCC 2 cut(s) 758, 912
SmlI CTYRAG 4 cut(s) 560, 691, 1145, 1503
SmoI CTYRAG 4 cut(s) 560, 691, 1145, 1503
SpeI ACTAGT 2 cut(s) 2167, 2191
SseBI AGGCCT 1 cut(s) 847
SsiI CCGC 4 cut(s) 108, 940, 1169, 1457
SspI AATATT 1 cut(s) 2208
SspMI CTAG 6 cut(s) 264, 720, 1266, 1836, 2168, 2192
SstI GAGCTC 3 cut(s) 227, 274, 1943
StuI AGGCCT 1 cut(s) 847
StyD4I CCNGG 2 cut(s) 299, 2450
StyI CCWWGG 2 cut(s) 512, 1530
TaaI ACNGT 6 cut(s) 426, 674, 1486, 1627, 2020, 2180
TaiI ACGT 1 cut(s) 1621
TatI WGTACW 6 cut(s) 30, 176, 426, 674, 1627, 1643
TfiI GAWTC 9 cut(s) 481, 659, 991, 1013, 1076, 1547, 1666, 1832, 2317
Tru1I TTAA 8 cut(s) 170, 561, 803, 917, 945, 1146, 1443, 1851
Tru9I TTAA 8 cut(s) 170, 561, 803, 917, 945, 1146, 1443, 1851
TscAI CASTG 4 cut(s) 622, 1308, 1771, 1901
TseFI GTSAC 6 cut(s) 50, 1386, 1519, 1597, 2238, 2477
TseI GCWGC 3 cut(s) 105, 1225, 1436
Tsp45I GTSAC 6 cut(s) 50, 1386, 1519, 1597, 2238, 2477
TspDTI ATGAA 6 cut(s) 31, 180, 219, 651, 983, 2472
TspRI CASTG 4 cut(s) 622, 1308, 1771, 1901
Vha464I CTTAAG 2 cut(s) 560, 1145
VpaK11BI GGWCC 2 cut(s) 758, 912
XapI RAATTY 3 cut(s) 157, 2045, 2158
XbaI TCTAGA 2 cut(s) 263, 1835
XceI RCATGY 1 cut(s) 51
XmnI GAANNNNTTC 1 cut(s) 1025
XspI CTAG 6 cut(s) 264, 720, 1266, 1836, 2168, 2192
ZrmI AGTACT 1 cut(s) 676
Zsp2I ATGCAT 1 cut(s) 2065
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.