No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G24630 AT3G24630 |
| malus_domestica | MD00G1028300.v1.1 MD02G1039400.v1.1 MD15G1182400.v1.1 |
| prunus_persica | Prupe.7G233100_v2.0.a1 Prupe.7G233100_v2.0.a1 Prupe.7G233100_v2.0.a1 Prupe.7G233100_v2.0.a1 Prupe.7G233100_v2.0.a1 Prupe.7G233100_v2.0.a1 |
| pyrus_communis | pycom02g03210 pycom02g05190 pycom02g05210 pycom15g16470 |
| rosa_chinensis | RchiOBHm_Chr2g0090061 |
| rosa_laevigata | RLG00000016082 |
| rosa_roxburghii | Rroxscaffold_2G00151430 |
| rosa_rugosa | Rorug02G0005000 |
| rosa_samantha | Rh2AG050700 Rh2BG049300 Rh2CG051500 Rh2DG050900 |
| rosa_wichuraiana | Rw2G003990 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccBSI | CCGCTC | 1 cut(s) | 417 |
| AciI | CCGC | 2 cut(s) | 345, 415 |
| AclWI | GGATC | 2 cut(s) | 247, 342 |
| AcuI | CTGAAG | 1 cut(s) | 162 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 61 |
| AgsI | TTSAA | 3 cut(s) | 37, 177, 187 |
| AluBI | AGCT | 3 cut(s) | 32, 191, 374 |
| AluI | AGCT | 3 cut(s) | 32, 191, 374 |
| Alw26I | GTCTC | 1 cut(s) | 395 |
| AlwI | GGATC | 2 cut(s) | 247, 342 |
| Ama87I | CYCGRG | 2 cut(s) | 329, 398 |
| AoxI | GGCC | 3 cut(s) | 153, 354, 412 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 75 |
| AspS9I | GGNCC | 1 cut(s) | 354 |
| AsuHPI | GGTGA | 2 cut(s) | 276, 283 |
| AvaI | CYCGRG | 2 cut(s) | 329, 398 |
| BaeGI | GKGCMC | 1 cut(s) | 396 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 389, 423 |
| BcoDI | GTCTC | 1 cut(s) | 395 |
| BfmI | CTRYAG | 1 cut(s) | 201 |
| BglII | AGATCT | 1 cut(s) | 205 |
| BisI | GCNGC | 1 cut(s) | 415 |
| BlsI | GCNGC | 1 cut(s) | 416 |
| BmeT110I | CYCGRG | 2 cut(s) | 329, 398 |
| BmgT120I | GGNCC | 1 cut(s) | 354 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 381, 413 |
| BsaI | GGTCTC | 1 cut(s) | 395 |
| BsaJI | CCNNGG | 1 cut(s) | 330 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 61 |
| BseDI | CCNNGG | 1 cut(s) | 330 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 61 |
| BseMII | CTCAG | 1 cut(s) | 352 |
| BseSI | GKGCMC | 1 cut(s) | 396 |
| BshFI | GGCC | 3 cut(s) | 155, 356, 414 |
| BsiHKCI | CYCGRG | 2 cut(s) | 329, 398 |
| BslFI | GGGAC | 1 cut(s) | 312 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 61 |
| BsmAI | GTCTC | 1 cut(s) | 395 |
| BsmFI | GGGAC | 1 cut(s) | 312 |
| BsnI | GGCC | 3 cut(s) | 155, 356, 414 |
| Bso31I | GGTCTC | 1 cut(s) | 395 |
| BsoBI | CYCGRG | 2 cut(s) | 329, 398 |
| Bsp1286I | GDGCHC | 1 cut(s) | 396 |
| Bsp143I | GATC | 3 cut(s) | 205, 252, 334 |
| BspACI | CCGC | 2 cut(s) | 345, 415 |
| BspANI | GGCC | 3 cut(s) | 155, 356, 414 |
| BspCNI | CTCAG | 1 cut(s) | 351 |
| BspMAI | CTGCAG | 1 cut(s) | 205 |
| BspPI | GGATC | 2 cut(s) | 247, 342 |
| BspTNI | GGTCTC | 1 cut(s) | 395 |
| BsrBI | CCGCTC | 1 cut(s) | 417 |
| BssECI | CCNNGG | 1 cut(s) | 330 |
| BssMI | GATC | 3 cut(s) | 205, 252, 334 |
| Bst6I | CTCTTC | 2 cut(s) | 66, 382 |
| BstC8I | GCNNGC | 1 cut(s) | 412 |
| BstDEI | CTNAG | 1 cut(s) | 338 |
| BstKTI | GATC | 3 cut(s) | 208, 255, 337 |
| BstMAI | GTCTC | 1 cut(s) | 395 |
| BstMBI | GATC | 3 cut(s) | 205, 252, 334 |
| BstSFI | CTRYAG | 1 cut(s) | 201 |
| BstSLI | GKGCMC | 1 cut(s) | 396 |
| BstX2I | RGATCY | 3 cut(s) | 205, 252, 334 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 377 |
| BstYI | RGATCY | 3 cut(s) | 205, 252, 334 |
| BsuRI | GGCC | 3 cut(s) | 155, 356, 414 |
| Cac8I | GCNNGC | 1 cut(s) | 412 |
| Cfr13I | GGNCC | 1 cut(s) | 354 |
| CviAII | CATG | 1 cut(s) | 377 |
| CviJI | RGCY | 7 cut(s) | 32, 155, 173, 191, 356, 374, 414 |
| CviKI_1 | RGCY | 7 cut(s) | 32, 155, 173, 191, 356, 374, 414 |
| DdeI | CTNAG | 1 cut(s) | 338 |
| DpnI | GATC | 3 cut(s) | 207, 254, 336 |
| DpnII | GATC | 3 cut(s) | 205, 252, 334 |
| Eam1104I | CTCTTC | 2 cut(s) | 66, 382 |
| EarI | CTCTTC | 2 cut(s) | 66, 382 |
| Eco31I | GGTCTC | 1 cut(s) | 395 |
| Eco57I | CTGAAG | 1 cut(s) | 162 |
| Eco88I | CYCGRG | 2 cut(s) | 329, 398 |
| FaeI | CATG | 1 cut(s) | 380 |
| FaiI | YATR | 3 cut(s) | 219, 299, 378 |
| FaqI | GGGAC | 1 cut(s) | 312 |
| FatI | CATG | 1 cut(s) | 376 |
| FauI | CCCGC | 1 cut(s) | 338 |
| Fnu4HI | GCNGC | 1 cut(s) | 415 |
| Fsp4HI | GCNGC | 1 cut(s) | 415 |
| GluI | GCNGC | 1 cut(s) | 415 |
| HaeIII | GGCC | 3 cut(s) | 155, 356, 414 |
| Hin1II | CATG | 1 cut(s) | 380 |
| HindIII | AAGCTT | 1 cut(s) | 189 |
| HinfI | GANTC | 3 cut(s) | 76, 359, 382 |
| HphI | GGTGA | 2 cut(s) | 276, 283 |
| Hpy188I | TCNGA | 4 cut(s) | 43, 341, 364, 421 |
| Hpy188III | TCNNGA | 3 cut(s) | 177, 329, 400 |
| HpyAV | CCTTC | 2 cut(s) | 20, 235 |
| HpyCH4V | TGCA | 3 cut(s) | 52, 203, 410 |
| HpyF3I | CTNAG | 1 cut(s) | 338 |
| Hsp92II | CATG | 1 cut(s) | 380 |
| Kzo9I | GATC | 3 cut(s) | 205, 252, 334 |
| LmnI | GCTCC | 2 cut(s) | 17, 29 |
| LpnPI | CCDG | 3 cut(s) | 153, 300, 396 |
| MaeIII | GTNAC | 1 cut(s) | 124 |
| MalI | GATC | 3 cut(s) | 207, 254, 336 |
| MbiI | CCGCTC | 1 cut(s) | 417 |
| MboI | GATC | 3 cut(s) | 205, 252, 334 |
| MboII | GAAGA | 5 cut(s) | 83, 113, 155, 399, 434 |
| MfeI | CAATTG | 1 cut(s) | 231 |
| MflI | RGATCY | 3 cut(s) | 205, 252, 334 |
| MhlI | GDGCHC | 1 cut(s) | 396 |
| MluCI | AATT | 2 cut(s) | 231, 429 |
| MlyI | GAGTC | 1 cut(s) | 368 |
| MnlI | CCTC | 4 cut(s) | 145, 220, 325, 407 |
| MroXI | GAANNNNTTC | 1 cut(s) | 75 |
| MunI | CAATTG | 1 cut(s) | 231 |
| NdeII | GATC | 3 cut(s) | 205, 252, 334 |
| NlaIII | CATG | 1 cut(s) | 380 |
| NmeAIII | GCCGAG | 1 cut(s) | 382 |
| NmuCI | GTSAC | 1 cut(s) | 124 |
| PaeR7I | CTCGAG | 1 cut(s) | 398 |
| PdmI | GAANNNNTTC | 1 cut(s) | 75 |
| PfeI | GAWTC | 2 cut(s) | 76, 382 |
| PkrI | GCNGC | 1 cut(s) | 416 |
| PleI | GAGTC | 1 cut(s) | 367 |
| PpsI | GAGTC | 1 cut(s) | 367 |
| PspPI | GGNCC | 1 cut(s) | 354 |
| PstI | CTGCAG | 1 cut(s) | 205 |
| PsuI | RGATCY | 3 cut(s) | 205, 252, 334 |
| SatI | GCNGC | 1 cut(s) | 415 |
| Sau3AI | GATC | 3 cut(s) | 205, 252, 334 |
| Sau96I | GGNCC | 1 cut(s) | 354 |
| SchI | GAGTC | 1 cut(s) | 368 |
| SduI | GDGCHC | 1 cut(s) | 396 |
| SetI | ASST | 8 cut(s) | 34, 92, 112, 142, 193, 246, 376, 407 |
| SfcI | CTRYAG | 1 cut(s) | 201 |
| Sfr274I | CTCGAG | 1 cut(s) | 398 |
| SlaI | CTCGAG | 1 cut(s) | 398 |
| SmlI | CTYRAG | 1 cut(s) | 398 |
| SmoI | CTYRAG | 1 cut(s) | 398 |
| Sse9I | AATT | 2 cut(s) | 231, 429 |
| SsiI | CCGC | 2 cut(s) | 345, 415 |
| TaqI | TCGA | 2 cut(s) | 385, 399 |
| TasI | AATT | 2 cut(s) | 231, 429 |
| TauI | GCSGC | 1 cut(s) | 417 |
| TfiI | GAWTC | 2 cut(s) | 76, 382 |
| TseFI | GTSAC | 1 cut(s) | 124 |
| Tsp45I | GTSAC | 1 cut(s) | 124 |
| XhoI | CTCGAG | 1 cut(s) | 398 |
| XmnI | GAANNNNTTC | 1 cut(s) | 75 |