Rroxscaffold_2G00151430

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000002
OG0007913
Physical Location & Seq
Reverse (-)
88669909 .. 88673765
3857 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_2G00151430.1

Sequence Viewer

Length: 2535 bp
ATGCCTCAGGACGGTCTAAAATCAGCTTTGTACAGATCATTCATCACATGTGACGATCCTAAAGGAGTTGTGGATTGTGGGATGATAATGAGGAGATCCAAAAGCAGCGGTGGTTCACAGATTATGGATAAGCAGAAGAAGATCGAAGTCCAAAGAAATTCGAAGAACTCAATTAGTACATCACCATCTTCATTGGGGTTGATCTCCCAAGAGGAGTTTCAGAGCTCTTCATCATCTTCTTCTTTTCAGCTCATGGAAGTTTCTAGAGGAGCTCAGAGGCTGAACCACATGATTGGTTCCTGGTCGAATGAGAAGAAGAGATTTGATCATGGCCAGTCTAAAGACATTGCAAAAGATTTGCTAAAAGGAGCGCTTGATTTGCAGGAGAGTCTTGTTATGCTTGGGAAGTTGCAAGAAGCTTCACAGTACATGAGTAACTTGAACAAAAAGCACATGGGACAGCCGGAAAGAGCTTACTCGAATCGATATGGAGATCAAGGTTATGTGAAGCCAACGCTTTCTTCTGATGGAGACTCTTCAAGGAATAGTAATGAGGAGCTTAAGAAGGTGATCAGAGACAGCCTTGTGAGGCAAAAATTGTTCGAAAATACAAGCACTGCTGAGAAGGGTTGTGCTTATTCTCCTCAAAGATATAGGGATTCATATTCAGACAGTACTCCTTCCACAAGCTCAAGCCAGTCTTCTATATATCATAATTCTAGTGAGTATTCCAGCATTGCATCACAAAAGGCGAAAGGTCCAAGTCTGATTGCCAAACTCATGGGAATAGAAGAGTACCCTTTAAAATCTGTGCAGGAGGGTGAGAAGGTTTCAAAACAGCAGAGGCCTGCTTTTGAAATTGATAGGCCAAAGGTGAGGAAGCCTCTGACTGCATCTCAAAGTGTTGATCCAGAAAAGAGGACCTTAAAGGAAGTTCTTGACACGATGCGGTTTAAAGGGCTTCTGAGAAACAACTCTTTTGAAGAACCCAAGTTTGAGATTCATCATTCCAATCATTTGGAATCGGAGAAAAGGTCCAATGGTGATAGTCCACCAATTGTGCTGATCAAGCCTATTTCTGTTGAATCCCCAGAAATGGAAGCAAACGCACCAATTGTTCGGGGAGATGAAGCTTTCTACAACAGAAGGATGCTTAAGAAATTGAGATCAGAAAAAAAGGTTTCTCCCAAAACAGCGAGTGGTAAAGAGGGAGCTTTGAAGTCTGACAAAGTGCAGCAAAAACTCGAAGTAGAAGAGACATCAATTAGAAAGACTAGCAAAGAAGAAGGAGCTAAAAAGCATCGAGGGGCAGTGGACAAACATGGAGAAAAAGAAGCCAAGATGAAAGAAATGGCTTCGAGAAAGTTGAAAGCTTCTCAACCTGTAGTTCACAAGTCACAGAAAAAGGAGGCAATTGACAAGAGGGTTGATAAGATCCAAAAGGTAGCTGCTGTTAACAGGAACTCAGCGGAGAAGGATAGAGTGATAGCTAAAACCGTGTCAAAATCTCAAGATCAAGACATTGTAACATCTGCCAAGGCAAGAAAGCCTGAGTCTGGATCAAACATCAAAAAGACTCAAGTTTCTCGACAACCCAGTACTGTGACAAGCACAAGTTCAAAACGTTCAACAGTACAGAATGCAGAGTGTACTTCCAGCGAACACAGAAGGAATCATTTGAGGAAGGAAAAGCCAGTCAAGGAGCCTACAGGAGCTAAATCAGTTGCCAAAAATGTTGTGAGCGAAGAAATTGTCAGGAGAATTGATACCAGTGATAAAAGTGAGTCTTCTCTGATCAGCTCTGAAAATACGCCAATACTAACAAGCTCCAACACTGATTCTAGAGATCAACTCCTTAAAGAAGAGGAACAGGAAACCTATGGATCCCAGAGTGAAGGGCACTGCAATAGTTTCCAAAGTTCTCTTTCTGAAGCTACATCACTGAGCTCCATGCAAGAAACAAACCCTGAAACTGCAGTAGAAGTTTCTGGAGACATCAGTCAGAGTGGAAGGGATGGCAAAACAGTCAGAAGTGGTGAAAATCACAGAGAATTTCTTTTGAGTAGTGCATCATTTCTGAGTCATGCCGAACAGTATTTTGATCTTGATGTGAATGGCTCTACAATCTTACAAACATCTTCTGTCTCCAATTTCGGAGTGTCGAATTCAAGACTAGTTTTAGACTGTGCAAGCGAACTAGTCGAGTGCAAAATATTTCAAGCTTCACAAACAGTTGATCCTCTGTCACTAACATTCAAAGTCAAGTCAAAAGTTTCCATATCGTTGGACAAGTTGGTGGAAGATATTTGGAATGGGATCGAGAATCTGAGAAGTTACAGCAAGCTTGCTGGTGAGAGCCTTCTTGCAGATAGTCTGTATGCAATGTTGGAGAGAGATGTAATGTGCAAAGGAGTAGGAAAAGGAACATGGGATTTGGGTTGGAGAAATGGATTTTCCGGGGATGAAGGCGAGCAAGTAGTGAGTGACATAGAGAGACTGATTTTCAATGGACTGATTGAGGAGGTCTTTGCATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF4378 VARLMGL

Protein Analysis

844

Amino Acids

93.65

Weight (kDa)

9.0

Isoelectric Point (pI)

53.18

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF4378 PF14309 719 - 841 4e-08 Domain of unknown function (DUF4378)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 3 cut(s) 108, 949, 1469
AclI AACGTT 1 cut(s) 1624
AclWI GGATC 9 cut(s) 50, 90, 902, 1429, 1567, 1878, 1891, 2231, 2324
AcoI YGGCCR 1 cut(s) 331
AcsI RAATTY 3 cut(s) 157, 2051, 2164
AcuI CTGAAG 1 cut(s) 1950
AfaI GTAC 8 cut(s) 32, 178, 428, 676, 797, 1600, 1635, 1651
AfeI AGCGCT 1 cut(s) 372
AfiI CCNNNNNNNGG 3 cut(s) 11, 1096, 1556
AflII CTTAAG 2 cut(s) 560, 1154
AflIII ACRYGT 1 cut(s) 47
AhlI ACTAGT 2 cut(s) 2173, 2197
AjnI CCWGG 1 cut(s) 299
AjuI GAANNNNNNNTTGG 4 cut(s) 201, 233, 505, 537
Alw21I GWGCWC 3 cut(s) 227, 274, 1949
Alw26I GTCTC 6 cut(s) 525, 570, 1250, 1986, 2149, 2488
AlwI GGATC 9 cut(s) 50, 90, 902, 1429, 1567, 1878, 1891, 2231, 2324
AlwNI CAGNNNCTG 1 cut(s) 280
Aor51HI AGCGCT 1 cut(s) 372
AoxI GGCC 3 cut(s) 331, 845, 866
ApeKI GCWGC 3 cut(s) 105, 1234, 1448
ApoI RAATTY 3 cut(s) 157, 2051, 2164
ArsI GACNNNNNNTTYG 2 cut(s) 1737, 1769
AspLEI GCGC 1 cut(s) 373
AspS9I GGNCC 3 cut(s) 758, 921, 1035
AsuC2I CCSGG 1 cut(s) 2458
AsuHPI GGTGA 7 cut(s) 174, 580, 833, 886, 1055, 2048, 2363
AsuII TTCGAA 2 cut(s) 161, 603
AvaII GGWCC 3 cut(s) 758, 921, 1035
AxyI CCTNAGG 1 cut(s) 6
BaeGI GKGCMC 1 cut(s) 1902
BalI TGGCCA 1 cut(s) 333
BamHI GGATCC 1 cut(s) 1883
BanII GRGCYC 3 cut(s) 227, 274, 1949
BbsI GAAGAC 2 cut(s) 693, 1779
Bbv12I GWGCWC 3 cut(s) 227, 274, 1949
BbvI GCAGC 3 cut(s) 117, 1246, 1435
BccI CCATC 3 cut(s) 193, 521, 2009
BciT130I CCWGG 1 cut(s) 301
BclI TGATCA 4 cut(s) 325, 570, 1065, 1794
BcnI CCSGG 1 cut(s) 2458
BcoDI GTCTC 6 cut(s) 525, 570, 1250, 1986, 2149, 2488
BcuI ACTAGT 2 cut(s) 2173, 2197
BfaI CTAG 6 cut(s) 264, 720, 1275, 1842, 2174, 2198
BfmI CTRYAG 3 cut(s) 1383, 1707, 1974
BfoI RGCGCY 1 cut(s) 374
BfrI CTTAAG 2 cut(s) 560, 1154
BisI GCNGC 3 cut(s) 106, 1235, 1449
BlsI GCNGC 3 cut(s) 107, 1236, 1450
BmcAI AGTACT 2 cut(s) 676, 1600
Bme1390I CCNGG 2 cut(s) 301, 2458
Bme18I GGWCC 3 cut(s) 758, 921, 1035
BmgT120I GGNCC 3 cut(s) 758, 921, 1035
BmiI GGNNCC 3 cut(s) 298, 1704, 1885
BmrFI CCNGG 2 cut(s) 301, 2458
BmrI ACTGGG 1 cut(s) 1590
BmsI GCATC 6 cut(s) 749, 902, 936, 1140, 1309, 2078
BmuI ACTGGG 1 cut(s) 1590
BoxI GACNNNNGTC 1 cut(s) 1998
BpiI GAAGAC 2 cut(s) 693, 1779
BplI GAGNNNNNCTC 4 cut(s) 868, 900, 1836, 1868
BpmI CTGGAG 1 cut(s) 2010
Bpu14I TTCGAA 2 cut(s) 161, 603
BpuEI CTTGAG 3 cut(s) 676, 1494, 1563
BpuMI CCSGG 1 cut(s) 2458
Bsa29I ATCGAT 1 cut(s) 484
BsaJI CCNNGG 2 cut(s) 1536, 2457
BsaXI ACNNNNNCTCC 2 cut(s) 1019, 1049
Bsc4I CCNNNNNNNGG 3 cut(s) 11, 1096, 1556
Bse1I ACTGG 5 cut(s) 334, 697, 1596, 1694, 1770
Bse21I CCTNAGG 1 cut(s) 6
Bse3DI GCAATG 3 cut(s) 345, 735, 2388
BseBI CCWGG 1 cut(s) 301
BseCI ATCGAT 1 cut(s) 484
BseDI CCNNGG 2 cut(s) 1536, 2457
BseGI GGATG 4 cut(s) 87, 1155, 2020, 2467
BseLI CCNNNNNNNGG 3 cut(s) 11, 1096, 1556
BseMI GCAATG 3 cut(s) 345, 735, 2388
BseMII CTCAG 9 cut(s) 20, 287, 612, 956, 1479, 1542, 1934, 2069, 2318
BseNI ACTGG 5 cut(s) 334, 697, 1596, 1694, 1770
BseRI GAGGAG 6 cut(s) 106, 227, 282, 569, 633, 2534
BseSI GKGCMC 1 cut(s) 1902
BseXI GCAGC 3 cut(s) 117, 1246, 1435
BsgI GTGCAG 2 cut(s) 833, 1253
BshFI GGCC 3 cut(s) 333, 847, 868
BshVI ATCGAT 1 cut(s) 484
BsiHKAI GWGCWC 3 cut(s) 227, 274, 1949
BsiSI CCGG 2 cut(s) 464, 2457
BslFI GGGAC 1 cut(s) 471
BslI CCNNNNNNNGG 3 cut(s) 11, 1096, 1556
BsmAI GTCTC 6 cut(s) 525, 570, 1250, 1986, 2149, 2488
BsmFI GGGAC 1 cut(s) 471
BsmI GAATGC 1 cut(s) 1645
BsnI GGCC 3 cut(s) 333, 847, 868
Bsp119I TTCGAA 2 cut(s) 161, 603
Bsp1286I GDGCHC 4 cut(s) 227, 274, 1902, 1949
Bsp1407I TGTACA 1 cut(s) 30
BspACI CCGC 3 cut(s) 108, 949, 1469
BspANI GGCC 3 cut(s) 333, 847, 868
BspCNI CTCAG 9 cut(s) 19, 286, 613, 957, 1478, 1543, 1935, 2070, 2319
BspDI ATCGAT 1 cut(s) 484
BspLI GGNNCC 3 cut(s) 298, 1704, 1885
BspMAI CTGCAG 1 cut(s) 1978
BspPI GGATC 9 cut(s) 50, 90, 902, 1429, 1567, 1878, 1891, 2231, 2324
BspQI GCTCTTC 1 cut(s) 232
BspT104I TTCGAA 2 cut(s) 161, 603
BspTI CTTAAG 2 cut(s) 560, 1154
BsrDI GCAATG 3 cut(s) 345, 735, 2388
BsrGI TGTACA 1 cut(s) 30
BsrI ACTGG 5 cut(s) 334, 697, 1596, 1694, 1770
BssECI CCNNGG 2 cut(s) 1536, 2457
BssT1I CCWWGG 1 cut(s) 1536
Bst2UI CCWGG 1 cut(s) 301
Bst6I CTCTTC 6 cut(s) 232, 311, 541, 786, 1248, 1857
BstAFI CTTAAG 2 cut(s) 560, 1154
BstAUI TGTACA 1 cut(s) 30
BstBI TTCGAA 2 cut(s) 161, 603
BstC8I GCNNGC 5 cut(s) 849, 2191, 2342, 2346, 2471
BstDEI CTNAG 9 cut(s) 6, 273, 621, 965, 1465, 1551, 1943, 2078, 2327
BstF5I GGATG 4 cut(s) 87, 1155, 2020, 2467
BstH2I RGCGCY 1 cut(s) 374
BstHHI GCGC 1 cut(s) 373
BstMAI GTCTC 6 cut(s) 525, 570, 1250, 1986, 2149, 2488
BstMWI GCNNNNNNNGC 2 cut(s) 379, 1069
BstNI CCWGG 1 cut(s) 301
BstNSI RCATGY 1 cut(s) 51
BstPAI GACNNNNGTC 1 cut(s) 1998
BstSCI CCNGG 2 cut(s) 299, 2456
BstSFI CTRYAG 3 cut(s) 1383, 1707, 1974
BstSLI GKGCMC 1 cut(s) 1902
BstV1I GCAGC 3 cut(s) 117, 1246, 1435
BstV2I GAAGAC 2 cut(s) 693, 1779
BstX2I RGATCY 3 cut(s) 95, 1434, 1883
BstXI CCANNNNNNTGG 4 cut(s) 293, 781, 1018, 2284
BstYI RGATCY 3 cut(s) 95, 1434, 1883
Bsu15I ATCGAT 1 cut(s) 484
Bsu36I CCTNAGG 1 cut(s) 6
BsuRI GGCC 3 cut(s) 333, 847, 868
BsuTUI ATCGAT 1 cut(s) 484
BtsCI GGATG 4 cut(s) 87, 1155, 2020, 2467
BtsI GCAGTG 3 cut(s) 615, 1317, 1900
BtsIMutI CAGTG 6 cut(s) 615, 1317, 1777, 1833, 1900, 1940
Cac8I GCNNGC 5 cut(s) 849, 2191, 2342, 2346, 2471
CaiI CAGNNNCTG 1 cut(s) 280
CfoI GCGC 1 cut(s) 373
Cfr13I GGNCC 3 cut(s) 758, 921, 1035
ClaI ATCGAT 1 cut(s) 484
Csp6I GTAC 8 cut(s) 31, 177, 427, 675, 796, 1599, 1634, 1650
CviQI GTAC 8 cut(s) 31, 177, 427, 675, 796, 1599, 1634, 1650
DdeI CTNAG 9 cut(s) 6, 273, 621, 965, 1465, 1551, 1943, 2078, 2327
DraI TTTAAA 2 cut(s) 804, 955
EaeI YGGCCR 1 cut(s) 331
Eam1104I CTCTTC 6 cut(s) 232, 311, 541, 786, 1248, 1857
EarI CTCTTC 6 cut(s) 232, 311, 541, 786, 1248, 1857
Ecl136II GAGCTC 3 cut(s) 225, 272, 1947
Eco130I CCWWGG 1 cut(s) 1536
Eco147I AGGCCT 1 cut(s) 847
Eco24I GRGCYC 3 cut(s) 227, 274, 1949
Eco47I GGWCC 3 cut(s) 758, 921, 1035
Eco47III AGCGCT 1 cut(s) 372
Eco53kI GAGCTC 3 cut(s) 225, 272, 1947
Eco57I CTGAAG 1 cut(s) 1950
Eco81I CCTNAGG 1 cut(s) 6
EcoICRI GAGCTC 3 cut(s) 225, 272, 1947
EcoO109I RGGNCCY 1 cut(s) 921
EcoRI GAATTC 1 cut(s) 2164
EcoRII CCWGG 1 cut(s) 299
EcoT14I CCWWGG 1 cut(s) 1536
EcoT38I GRGCYC 3 cut(s) 227, 274, 1949
ErhI CCWWGG 1 cut(s) 1536
FalI AAGNNNNNCTT 8 cut(s) 357, 389, 685, 717, 908, 940, 1771, 1803
FaqI GGGAC 1 cut(s) 471
FbaI TGATCA 4 cut(s) 325, 570, 1065, 1794
Fnu4HI GCNGC 3 cut(s) 106, 1235, 1449
FokI GGATG 4 cut(s) 94, 1162, 2027, 2474
FriOI GRGCYC 3 cut(s) 227, 274, 1949
Fsp4HI GCNGC 3 cut(s) 106, 1235, 1449
FspBI CTAG 6 cut(s) 264, 720, 1275, 1842, 2174, 2198
GlaI GCGC 1 cut(s) 372
GluI GCNGC 3 cut(s) 106, 1235, 1449
GsuI CTGGAG 1 cut(s) 2010
HaeII RGCGCY 1 cut(s) 374
HaeIII GGCC 3 cut(s) 333, 847, 868
HapII CCGG 2 cut(s) 464, 2457
HhaI GCGC 1 cut(s) 373
Hin6I GCGC 1 cut(s) 371
HinP1I GCGC 1 cut(s) 371
HincII GTYRAC 1 cut(s) 1456
HindII GTYRAC 1 cut(s) 1456
HindIII AAGCTT 5 cut(s) 417, 1131, 1371, 2220, 2342
HpaI GTTAAC 1 cut(s) 1456
HpaII CCGG 2 cut(s) 464, 2457
HphI GGTGA 7 cut(s) 174, 580, 833, 886, 1055, 2048, 2363
Hpy166II GTNNAC 6 cut(s) 116, 1052, 1315, 1390, 1456, 1650
Hpy8I GTNNAC 6 cut(s) 116, 1052, 1315, 1390, 1456, 1650
HpyCH4IV ACGT 1 cut(s) 1624
HpyF10VI GCNNNNNNNGC 2 cut(s) 379, 1069
HpyF3I CTNAG 9 cut(s) 6, 273, 621, 965, 1465, 1551, 1943, 2078, 2327
HpySE526I ACGT 1 cut(s) 1624
HspAI GCGC 1 cut(s) 371
Ksp22I TGATCA 4 cut(s) 325, 570, 1065, 1794
KspAI GTTAAC 1 cut(s) 1456
LguI GCTCTTC 1 cut(s) 232
LmnI GCTCC 9 cut(s) 269, 368, 556, 1211, 1289, 1702, 1712, 1832, 1952
Lsp1109I GCAGC 3 cut(s) 117, 1246, 1435
LweI GCATC 6 cut(s) 749, 902, 936, 1140, 1309, 2078
MaeI CTAG 6 cut(s) 264, 720, 1275, 1842, 2174, 2198
MaeII ACGT 1 cut(s) 1624
MaeIII GTNAC 8 cut(s) 50, 434, 1395, 1525, 1603, 2244, 2333, 2483
MfeI CAATTG 3 cut(s) 1056, 1113, 1413
MflI RGATCY 3 cut(s) 95, 1434, 1883
MhlI GDGCHC 4 cut(s) 227, 274, 1902, 1949
MlsI TGGCCA 1 cut(s) 333
MluNI TGGCCA 1 cut(s) 333
MlyI GAGTC 6 cut(s) 397, 527, 1562, 1570, 1793, 2089
MmeI TCCRAC 4 cut(s) 1854, 2265, 2367, 2420
Mox20I TGGCCA 1 cut(s) 333
MscI TGGCCA 1 cut(s) 333
MseI TTAA 7 cut(s) 561, 803, 926, 954, 1155, 1455, 1857
Msp20I TGGCCA 1 cut(s) 333
MspA1I CMGCKG 2 cut(s) 108, 1469
MspCI CTTAAG 2 cut(s) 560, 1154
MspI CCGG 2 cut(s) 464, 2457
MspR9I CCNGG 2 cut(s) 301, 2458
MunI CAATTG 3 cut(s) 1056, 1113, 1413
Mva1269I GAATGC 1 cut(s) 1645
MvaI CCWGG 1 cut(s) 301
MwoI GCNNNNNNNGC 2 cut(s) 379, 1069
NciI CCSGG 1 cut(s) 2458
NlaIV GGNNCC 3 cut(s) 298, 1704, 1885
NmuCI GTSAC 5 cut(s) 50, 1395, 1603, 2244, 2483
NspI RCATGY 1 cut(s) 51
NspV TTCGAA 2 cut(s) 161, 603
PceI AGGCCT 1 cut(s) 847
PciI ACATGT 1 cut(s) 47
PciSI GCTCTTC 1 cut(s) 232
PctI GAATGC 1 cut(s) 1645
PfeI GAWTC 8 cut(s) 481, 659, 1000, 1022, 1085, 1672, 1838, 2323
PkrI GCNGC 3 cut(s) 107, 1236, 1450
PleI GAGTC 6 cut(s) 396, 527, 1561, 1570, 1792, 2088
PpsI GAGTC 6 cut(s) 396, 527, 1561, 1570, 1792, 2088
PpuMI RGGWCCY 1 cut(s) 921
PscI ACATGT 1 cut(s) 47
PshAI GACNNNNGTC 1 cut(s) 1998
Psp124BI GAGCTC 3 cut(s) 227, 274, 1949
Psp1406I AACGTT 1 cut(s) 1624
Psp5II RGGWCCY 1 cut(s) 921
Psp6I CCWGG 1 cut(s) 299
PspGI CCWGG 1 cut(s) 299
PspN4I GGNNCC 3 cut(s) 298, 1704, 1885
PspPI GGNCC 3 cut(s) 758, 921, 1035
PspPPI RGGWCCY 1 cut(s) 921
PstI CTGCAG 1 cut(s) 1978
PstNI CAGNNNCTG 1 cut(s) 280
PsuI RGATCY 3 cut(s) 95, 1434, 1883
RsaI GTAC 8 cut(s) 32, 178, 428, 676, 797, 1600, 1635, 1651
RsaNI GTAC 8 cut(s) 31, 177, 427, 675, 796, 1599, 1634, 1650
SacI GAGCTC 3 cut(s) 227, 274, 1949
SapI GCTCTTC 1 cut(s) 232
SaqAI TTAA 7 cut(s) 561, 803, 926, 954, 1155, 1455, 1857
SatI GCNGC 3 cut(s) 106, 1235, 1449
Sau96I GGNCC 3 cut(s) 758, 921, 1035
ScaI AGTACT 2 cut(s) 676, 1600
SchI GAGTC 6 cut(s) 397, 527, 1562, 1570, 1793, 2089
ScrFI CCNGG 2 cut(s) 301, 2458
SduI GDGCHC 4 cut(s) 227, 274, 1902, 1949
SfaNI GCATC 6 cut(s) 749, 902, 936, 1140, 1309, 2078
SfcI CTRYAG 3 cut(s) 1383, 1707, 1974
SfuI TTCGAA 2 cut(s) 161, 603
SinI GGWCC 3 cut(s) 758, 921, 1035
SmlI CTYRAG 5 cut(s) 560, 691, 1154, 1509, 1578
SmoI CTYRAG 5 cut(s) 560, 691, 1154, 1509, 1578
SpeI ACTAGT 2 cut(s) 2173, 2197
SseBI AGGCCT 1 cut(s) 847
SsiI CCGC 3 cut(s) 108, 949, 1469
SspI AATATT 1 cut(s) 2214
SspMI CTAG 6 cut(s) 264, 720, 1275, 1842, 2174, 2198
SstI GAGCTC 3 cut(s) 227, 274, 1949
StuI AGGCCT 1 cut(s) 847
StyD4I CCNGG 2 cut(s) 299, 2456
StyI CCWWGG 1 cut(s) 1536
TaiI ACGT 1 cut(s) 1627
TatI WGTACW 7 cut(s) 30, 176, 426, 674, 1598, 1633, 1649
TfiI GAWTC 8 cut(s) 481, 659, 1000, 1022, 1085, 1672, 1838, 2323
Tru1I TTAA 7 cut(s) 561, 803, 926, 954, 1155, 1455, 1857
Tru9I TTAA 7 cut(s) 561, 803, 926, 954, 1155, 1455, 1857
TscAI CASTG 6 cut(s) 622, 1317, 1777, 1840, 1907, 1947
TseFI GTSAC 5 cut(s) 50, 1395, 1603, 2244, 2483
TseI GCWGC 3 cut(s) 105, 1234, 1448
Tsp45I GTSAC 5 cut(s) 50, 1395, 1603, 2244, 2483
TspDTI ATGAA 8 cut(s) 31, 180, 219, 651, 992, 1143, 1358, 2478
TspRI CASTG 6 cut(s) 622, 1317, 1777, 1840, 1907, 1947
Vha464I CTTAAG 2 cut(s) 560, 1154
VpaK11BI GGWCC 3 cut(s) 758, 921, 1035
XapI RAATTY 3 cut(s) 157, 2051, 2164
XbaI TCTAGA 2 cut(s) 263, 1841
XceI RCATGY 1 cut(s) 51
XspI CTAG 6 cut(s) 264, 720, 1275, 1842, 2174, 2198
ZrmI AGTACT 2 cut(s) 676, 1600
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.