Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0006141

Physical Location & Seq

Genomic Coordinates Reverse (-)

20615695 .. 20618445

Gene Structure 2751 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G238700.4

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1026 bp

ATGCCCAAGGATAGAAGGGGCCGATCTGTGTCTCGTGATAGGTATAGAGCATCTCCTTATCCATGCAGCTCCAGTCATACAAGGCGGCCGCCACCCAAAATTCCTTCAGAAACTGAGGAAAATGTGAAAGAATGGGAAGACACCAGGTGCCCTGTTTGCTTGGAGCATCCACACAATGCAGTTTTACTTATATGTTCATCCTATGAGAAGGGGTGCCGCCCTTACATGTGTGACACAAGCTACCGCCATTCAAACTGTCTAGACCAGTACTGCAAGTCATTTTCAGCAGAAACCTCACCAACTGTGCCACCAGAAGGAGAAAATCAGATTTTAGATACTCAGTCATCTCCAGCTGAAACTCTTGAATCAACAATTACTCATGTGCAAAATGATAGAATTGAGGAAGAGGCCCCCACCATGAATCCCATAGCCTGTGAGCATGAGGCACAGCCAAAGCTTTTGTGCCCCCTCTGCCGCGGGGAGATAAAAGATTGGATAATCGTGGAGCCTGCTCGTTGTTTCATGAATGCAAAATCAAGAAATTGTTCTTGCGAGACATGTAGTTTTATTGGAACCTATGCAGATCTTAGGAACCATGCTAGGTTGGAGCACCCACAAGCACGCCCATCAGAGGCAGACCCAGAGCGACAGCGTACCTGGAGGAGTTTGGAACGACAGAGGGATTTTGGTGACCTGCTTAGCACACTCCAATCTTCAATTGGAGAGGATAGGGGTGATGATAGCAGTTTGCCAGTTGATGATGGGGGTTGGTTGACTGTAGTCTTTCTAGTTCGAGTAATTCAACCTGGGGCCAGTTTAAGGAGCAGCACTTGGTCTGGTCCCAGAAGAACCAGAGCACAAGTTAGAATGAGAGGGAGAGCTACCACACTATGGGGGGAGAGCTATGATGGCGAAGCTGCATCTGCTTCTAGAGAAGAGGATAATGATTCTTCAGATGGCAGCACAGGTGCTAGGAGGCGTAGCGCGCGCCTCCGGCGACGGACAACACCAGACAACCAGCCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF1644

Protein Analysis

342

Amino Acids

38.56

Weight (kDa)

6.29

Isoelectric Point (pI)

66.45

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006141)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G25910
fragaria_vesca	FvH4_1g03830
malus_domestica	MD02G1036700.v1.1 MD15G1176800.v1.1
prunus_persica	Prupe.7G238700_v2.0.a1 Prupe.7G238700_v2.0.a1 Prupe.7G238700_v2.0.a1 Prupe.7G238700_v2.0.a1 Prupe.7G238700_v2.0.a1 Prupe.7G238700_v2.0.a1 Prupe.7G238700_v2.0.a1 Prupe.7G238700_v2.0.a1
pyrus_communis	pycom02g03020 pycom15g15830
rosa_chinensis	RchiOBHm_Chr2g0089221
rosa_laevigata	RLG00000016006
rosa_multiflora	Rmu_co8311577.1_g000001 Rmu_sc0008322.1_g000022 Rmu_sc0027405.1_g000002
rosa_roxburghii	Rroxscaffold_2G00152130
rosa_rugosa	Rorug01G0488500 Rorug01G0488600
rosa_samantha	Rh2AG044300 Rh2BG042900 Rh2CG044400 Rh2DG043200
rosa_wichuraiana	Rw2G003890

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	702
AccB1I	GGYRCC	2 cut(s)	147, 213
AccB7I	CCANNNNNTGG	1 cut(s)	891
AccII	CGCG	3 cut(s)	477, 986, 988
AciI	CCGC	6 cut(s)	85, 89, 217, 244, 475, 477
AcoI	YGGCCR	1 cut(s)	86
AcsI	RAATTY	1 cut(s)	99
AcuI	CTGAAG	2 cut(s)	90, 936
AdeI	CACNNNGTG	1 cut(s)	147
AfaI	GTAC	2 cut(s)	269, 655
AfiI	CCNNNNNNNGG	4 cut(s)	314, 631, 819, 891
AflIII	ACRYGT	2 cut(s)	225, 557
AgsI	TTSAA	4 cut(s)	252, 365, 717, 803
AjnI	CCWGG	3 cut(s)	143, 656, 805
AluBI	AGCT	7 cut(s)	69, 240, 353, 457, 881, 903, 917
AluI	AGCT	7 cut(s)	69, 240, 353, 457, 881, 903, 917
Alw21I	GWGCWC	2 cut(s)	612, 859
Alw26I	GTCTC	2 cut(s)	36, 548
AlwNI	CAGNNNCTG	1 cut(s)	113
AoxI	GGCC	4 cut(s)	19, 86, 408, 810
ApeKI	GCWGC	4 cut(s)	66, 825, 917, 960
ApoI	RAATTY	1 cut(s)	99
Asp700I	GAANNNNTTC	1 cut(s)	544
AspLEI	GCGC	3 cut(s)	986, 988, 990
AspS9I	GGNCC	4 cut(s)	19, 409, 810, 839
AsuHPI	GGTGA	3 cut(s)	288, 701, 746
AvaII	GGWCC	1 cut(s)	839
BaeGI	GKGCMC	2 cut(s)	152, 467
BanI	GGYRCC	2 cut(s)	147, 213
BauI	CACGAG	1 cut(s)	33
BbsI	GAAGAC	1 cut(s)	144
Bbv12I	GWGCWC	2 cut(s)	612, 859
BbvI	GCAGC	4 cut(s)	78, 837, 904, 972
BccI	CCATC	4 cut(s)	634, 755, 902, 950
BciT130I	CCWGG	3 cut(s)	145, 658, 807
BcoDI	GTCTC	2 cut(s)	36, 548
BfaI	CTAG	5 cut(s)	260, 600, 788, 930, 972
BfmI	CTRYAG	1 cut(s)	777
BfuAI	ACCTGC	1 cut(s)	702
BglII	AGATCT	1 cut(s)	583
BisI	GCNGC	8 cut(s)	67, 86, 89, 217, 475, 826, 918, 961
BlpI	GCTNAGC	1 cut(s)	698
BlsI	GCNGC	8 cut(s)	68, 87, 90, 218, 476, 827, 919, 962
BmcAI	AGTACT	1 cut(s)	269
Bme1390I	CCNGG	3 cut(s)	145, 658, 807
Bme18I	GGWCC	1 cut(s)	839
BmgT120I	GGNCC	4 cut(s)	19, 409, 810, 839
BmiI	GGNNCC	9 cut(s)	20, 149, 215, 411, 507, 574, 593, 811, 841
BmrFI	CCNGG	3 cut(s)	145, 658, 807
BmsI	GCATC	3 cut(s)	59, 175, 929
BoxI	GACNNNNGTC	1 cut(s)	779
BpiI	GAAGAC	1 cut(s)	144
BpmI	CTGGAG	3 cut(s)	55, 333, 679
Bpu1102I	GCTNAGC	1 cut(s)	698
BsaJI	CCNNGG	3 cut(s)	6, 475, 806
Bsc4I	CCNNNNNNNGG	4 cut(s)	314, 631, 819, 891
Bse1I	ACTGG	4 cut(s)	72, 265, 752, 813
BseBI	CCWGG	3 cut(s)	145, 658, 807
BseDI	CCNNGG	3 cut(s)	6, 475, 806
BseGI	GGATG	2 cut(s)	166, 197
BseLI	CCNNNNNNNGG	4 cut(s)	314, 631, 819, 891
BseMII	CTCAG	2 cut(s)	105, 353
BseNI	ACTGG	4 cut(s)	72, 265, 752, 813
BsePI	GCGCGC	2 cut(s)	984, 986
BseRI	GAGGAG	1 cut(s)	676
BseSI	GKGCMC	2 cut(s)	152, 467
BseX3I	CGGCCG	1 cut(s)	86
BseXI	GCAGC	4 cut(s)	78, 837, 904, 972
Bsh1236I	CGCG	3 cut(s)	477, 986, 988
Bsh1285I	CGRYCG	1 cut(s)	89
BshFI	GGCC	4 cut(s)	21, 88, 410, 812
BshNI	GGYRCC	2 cut(s)	147, 213
BsiEI	CGRYCG	1 cut(s)	89
BsiHKAI	GWGCWC	2 cut(s)	612, 859
BsiSI	CCGG	1 cut(s)	994
BslFI	GGGAC	1 cut(s)	825
BslI	CCNNNNNNNGG	4 cut(s)	314, 631, 819, 891
BsmAI	GTCTC	2 cut(s)	36, 548
BsmFI	GGGAC	1 cut(s)	825
BsmI	GAATGC	1 cut(s)	532
BsnI	GGCC	4 cut(s)	21, 88, 410, 812
Bsp1286I	GDGCHC	4 cut(s)	152, 467, 612, 859
Bsp143I	GATC	2 cut(s)	23, 583
Bsp1720I	GCTNAGC	1 cut(s)	698
BspACI	CCGC	6 cut(s)	85, 89, 217, 244, 475, 477
BspANI	GGCC	4 cut(s)	21, 88, 410, 812
BspCNI	CTCAG	2 cut(s)	106, 352
BspFNI	CGCG	3 cut(s)	477, 986, 988
BspHI	TCATGA	1 cut(s)	522
BspLI	GGNNCC	9 cut(s)	20, 149, 215, 411, 507, 574, 593, 811, 841
BspMI	ACCTGC	1 cut(s)	702
BspT107I	GGYRCC	2 cut(s)	147, 213
BsrI	ACTGG	4 cut(s)	72, 265, 752, 813
BssECI	CCNNGG	3 cut(s)	6, 475, 806
BssHII	GCGCGC	2 cut(s)	984, 986
BssMI	GATC	2 cut(s)	23, 583
BssSI	CACGAG	1 cut(s)	33
BssT1I	CCWWGG	1 cut(s)	6
Bst2BI	CACGAG	1 cut(s)	33
Bst2UI	CCWGG	3 cut(s)	145, 658, 807
Bst4CI	ACNGT	3 cut(s)	257, 304, 778
Bst6I	CTCTTC	2 cut(s)	399, 930
BstC8I	GCNNGC	4 cut(s)	510, 622, 986, 988
BstDEI	CTNAG	4 cut(s)	114, 339, 587, 698
BstDSI	CCRYGG	1 cut(s)	475
BstEII	GGTNACC	1 cut(s)	689
BstF5I	GGATG	2 cut(s)	166, 197
BstFNI	CGCG	3 cut(s)	477, 986, 988
BstHHI	GCGC	3 cut(s)	986, 988, 990
BstKTI	GATC	2 cut(s)	26, 586
BstMAI	GTCTC	2 cut(s)	36, 548
BstMBI	GATC	2 cut(s)	23, 583
BstMCI	CGRYCG	1 cut(s)	89
BstMWI	GCNNNNNNNGC	6 cut(s)	156, 471, 909, 923, 985, 994
BstNI	CCWGG	3 cut(s)	145, 658, 807
BstNSI	RCATGY	2 cut(s)	229, 561
BstPAI	GACNNNNGTC	1 cut(s)	779
BstPI	GGTNACC	1 cut(s)	689
BstSCI	CCNGG	3 cut(s)	143, 656, 805
BstSFI	CTRYAG	1 cut(s)	777
BstSLI	GKGCMC	2 cut(s)	152, 467
BstUI	CGCG	3 cut(s)	477, 986, 988
BstV1I	GCAGC	4 cut(s)	78, 837, 904, 972
BstV2I	GAAGAC	1 cut(s)	144
BstX2I	RGATCY	1 cut(s)	583
BstYI	RGATCY	1 cut(s)	583
BstZI	CGGCCG	1 cut(s)	86
BsuRI	GGCC	4 cut(s)	21, 88, 410, 812
BtgI	CCRYGG	1 cut(s)	475
BtsCI	GGATG	2 cut(s)	166, 197
BveI	ACCTGC	1 cut(s)	702
Cac8I	GCNNGC	4 cut(s)	510, 622, 986, 988
CaiI	CAGNNNCTG	1 cut(s)	113
CciI	TCATGA	1 cut(s)	522
CciNI	GCGGCCGC	1 cut(s)	86
CfoI	GCGC	3 cut(s)	986, 988, 990
Cfr13I	GGNCC	4 cut(s)	19, 409, 810, 839
Cfr42I	CCGCGG	1 cut(s)	478
CsiI	ACCWGGT	1 cut(s)	143
Csp6I	GTAC	2 cut(s)	268, 654
CviAII	CATG	9 cut(s)	63, 226, 380, 418, 440, 523, 558, 596, 1023
CviQI	GTAC	2 cut(s)	268, 654
DdeI	CTNAG	4 cut(s)	114, 339, 587, 698
DpnI	GATC	2 cut(s)	25, 585
DpnII	GATC	2 cut(s)	23, 583
DraIII	CACNNNGTG	1 cut(s)	147
EaeI	YGGCCR	1 cut(s)	86
EagI	CGGCCG	1 cut(s)	86
Eam1104I	CTCTTC	2 cut(s)	399, 930
EarI	CTCTTC	2 cut(s)	399, 930
EclXI	CGGCCG	1 cut(s)	86
Eco130I	CCWWGG	1 cut(s)	6
Eco47I	GGWCC	1 cut(s)	839
Eco52I	CGGCCG	1 cut(s)	86
Eco57I	CTGAAG	2 cut(s)	90, 936
Eco91I	GGTNACC	1 cut(s)	689
EcoO109I	RGGNCCY	1 cut(s)	409
EcoO65I	GGTNACC	1 cut(s)	689
EcoRII	CCWGG	3 cut(s)	143, 656, 805
EcoT14I	CCWWGG	1 cut(s)	6
ErhI	CCWWGG	1 cut(s)	6
FaeI	CATG	9 cut(s)	66, 229, 383, 421, 443, 526, 561, 599, 1026
FaqI	GGGAC	1 cut(s)	825
FatI	CATG	9 cut(s)	62, 225, 379, 417, 439, 522, 557, 595, 1022
FauI	CCCGC	1 cut(s)	470
Fnu4HI	GCNGC	8 cut(s)	67, 86, 89, 217, 475, 826, 918, 961
FokI	GGATG	2 cut(s)	153, 184
Fsp4HI	GCNGC	8 cut(s)	67, 86, 89, 217, 475, 826, 918, 961
FspBI	CTAG	5 cut(s)	260, 600, 788, 930, 972
GlaI	GCGC	3 cut(s)	985, 987, 989
GluI	GCNGC	8 cut(s)	67, 86, 89, 217, 475, 826, 918, 961
GsuI	CTGGAG	3 cut(s)	55, 333, 679
HaeIII	GGCC	4 cut(s)	21, 88, 410, 812
HapII	CCGG	1 cut(s)	994
HhaI	GCGC	3 cut(s)	986, 988, 990
Hin1II	CATG	9 cut(s)	66, 229, 383, 421, 443, 526, 561, 599, 1026
Hin6I	GCGC	3 cut(s)	984, 986, 988
HinP1I	GCGC	3 cut(s)	984, 986, 988
HincII	GTYRAC	1 cut(s)	774
HindII	GTYRAC	1 cut(s)	774
HindIII	AAGCTT	1 cut(s)	455
HinfI	GANTC	3 cut(s)	365, 421, 947
HpaII	CCGG	1 cut(s)	994
HphI	GGTGA	3 cut(s)	288, 701, 746
Hpy166II	GTNNAC	1 cut(s)	774
Hpy188I	TCNGA	4 cut(s)	109, 327, 631, 955
Hpy188III	TCNNGA	6 cut(s)	35, 260, 362, 523, 537, 930
Hpy8I	GTNNAC	1 cut(s)	774
Hpy99I	CGWCG	1 cut(s)	1002
HpyAV	CCTTC	4 cut(s)	9, 114, 202, 308
HpyCH4III	ACNGT	3 cut(s)	257, 304, 778
HpyCH4V	TGCA	7 cut(s)	66, 179, 273, 385, 530, 581, 920
HpyF10VI	GCNNNNNNNGC	6 cut(s)	156, 471, 909, 923, 985, 994
HpyF3I	CTNAG	4 cut(s)	114, 339, 587, 698
Hsp92II	CATG	9 cut(s)	66, 229, 383, 421, 443, 526, 561, 599, 1026
HspAI	GCGC	3 cut(s)	984, 986, 988
KspI	CCGCGG	1 cut(s)	478
Kzo9I	GATC	2 cut(s)	23, 583
LmnI	GCTCC	5 cut(s)	74, 163, 505, 607, 822
Lsp1109I	GCAGC	4 cut(s)	78, 837, 904, 972
LweI	GCATC	3 cut(s)	59, 175, 929
MabI	ACCWGGT	1 cut(s)	143
MaeI	CTAG	5 cut(s)	260, 600, 788, 930, 972
MaeIII	GTNAC	2 cut(s)	230, 689
MalI	GATC	2 cut(s)	25, 585
MboI	GATC	2 cut(s)	23, 583
MboII	GAAGA	6 cut(s)	149, 416, 705, 858, 942, 947
MfeI	CAATTG	1 cut(s)	717
MflI	RGATCY	1 cut(s)	583
MhlI	GDGCHC	4 cut(s)	152, 467, 612, 859
MluCI	AATT	6 cut(s)	99, 372, 396, 541, 717, 798
MmeI	TCCRAC	1 cut(s)	585
MroXI	GAANNNNTTC	1 cut(s)	544
MseI	TTAA	1 cut(s)	818
MspA1I	CMGCKG	2 cut(s)	353, 477
MspI	CCGG	1 cut(s)	994
MspR9I	CCNGG	3 cut(s)	145, 658, 807
MunI	CAATTG	1 cut(s)	717
Mva1269I	GAATGC	1 cut(s)	532
MvaI	CCWGG	3 cut(s)	145, 658, 807
MvnI	CGCG	3 cut(s)	477, 986, 988
MwoI	GCNNNNNNNGC	6 cut(s)	156, 471, 909, 923, 985, 994
NdeII	GATC	2 cut(s)	23, 583
NlaIII	CATG	9 cut(s)	66, 229, 383, 421, 443, 526, 561, 599, 1026
NlaIV	GGNNCC	9 cut(s)	20, 149, 215, 411, 507, 574, 593, 811, 841
NmuCI	GTSAC	2 cut(s)	230, 689
NotI	GCGGCCGC	1 cut(s)	86
NspI	RCATGY	2 cut(s)	229, 561
PagI	TCATGA	1 cut(s)	522
PauI	GCGCGC	2 cut(s)	984, 986
PciI	ACATGT	2 cut(s)	225, 557
PctI	GAATGC	1 cut(s)	532
PdmI	GAANNNNTTC	1 cut(s)	544
PfeI	GAWTC	3 cut(s)	365, 421, 947
PflMI	CCANNNNNTGG	1 cut(s)	891
PkrI	GCNGC	8 cut(s)	68, 87, 90, 218, 476, 827, 919, 962
PscI	ACATGT	2 cut(s)	225, 557
PshAI	GACNNNNGTC	1 cut(s)	779
Psp6I	CCWGG	3 cut(s)	143, 656, 805
PspEI	GGTNACC	1 cut(s)	689
PspGI	CCWGG	3 cut(s)	143, 656, 805
PspN4I	GGNNCC	9 cut(s)	20, 149, 215, 411, 507, 574, 593, 811, 841
PspPI	GGNCC	4 cut(s)	19, 409, 810, 839
PstNI	CAGNNNCTG	1 cut(s)	113
PsuI	RGATCY	1 cut(s)	583
PteI	GCGCGC	2 cut(s)	984, 986
PvuII	CAGCTG	1 cut(s)	353
RsaI	GTAC	2 cut(s)	269, 655
RsaNI	GTAC	2 cut(s)	268, 654
SacII	CCGCGG	1 cut(s)	478
SaqAI	TTAA	1 cut(s)	818
SatI	GCNGC	8 cut(s)	67, 86, 89, 217, 475, 826, 918, 961
Sau3AI	GATC	2 cut(s)	23, 583
Sau96I	GGNCC	4 cut(s)	19, 409, 810, 839
ScaI	AGTACT	1 cut(s)	269
ScrFI	CCNGG	3 cut(s)	145, 658, 807
SduI	GDGCHC	4 cut(s)	152, 467, 612, 859
SexAI	ACCWGGT	1 cut(s)	143
SfaNI	GCATC	3 cut(s)	59, 175, 929
SfcI	CTRYAG	1 cut(s)	777
Sfr303I	CCGCGG	1 cut(s)	478
SgrBI	CCGCGG	1 cut(s)	478
SinI	GGWCC	1 cut(s)	839
Sse9I	AATT	6 cut(s)	99, 372, 396, 541, 717, 798
SsiI	CCGC	6 cut(s)	85, 89, 217, 244, 475, 477
SspMI	CTAG	5 cut(s)	260, 600, 788, 930, 972
StyD4I	CCNGG	3 cut(s)	143, 656, 805
StyI	CCWWGG	1 cut(s)	6
TaaI	ACNGT	3 cut(s)	257, 304, 778
TaqI	TCGA	1 cut(s)	793
TasI	AATT	6 cut(s)	99, 372, 396, 541, 717, 798
TatI	WGTACW	1 cut(s)	267
TauI	GCSGC	4 cut(s)	88, 91, 219, 477
TfiI	GAWTC	3 cut(s)	365, 421, 947
Tru1I	TTAA	1 cut(s)	818
Tru9I	TTAA	1 cut(s)	818
TseFI	GTSAC	2 cut(s)	230, 689
TseI	GCWGC	4 cut(s)	66, 825, 917, 960
Tsp45I	GTSAC	2 cut(s)	230, 689
TspDTI	ATGAA	4 cut(s)	186, 434, 511, 539
TspGWI	ACGGA	1 cut(s)	1015
Van91I	CCANNNNNTGG	1 cut(s)	891
VpaK11BI	GGWCC	1 cut(s)	839
XapI	RAATTY	1 cut(s)	99
XbaI	TCTAGA	2 cut(s)	259, 929
XceI	RCATGY	2 cut(s)	229, 561
XcmI	CCANNNNNNNNNTGG	1 cut(s)	716
XmnI	GAANNNNTTC	1 cut(s)	544
XspI	CTAG	5 cut(s)	260, 600, 788, 930, 972
ZrmI	AGTACT	1 cut(s)	269

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.