Prupe.7G245600_v2.0.a1

Belongs to the glycosyl hydrolase 17 family

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
Physical Location & Seq
Forward (+)
20934207 .. 20937158
2952 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.7G245600.1

Sequence Viewer

Length: 1197 bp
ATGATGAAGAGCTTCTGGTTCTTTGCTCAGTTTCTTCACGTCTTCTTGGTCTTCTCCACTCCAATTGCCTCTGTGGCAGTACAAGCATTCACTGGAGCCTATGGAATAAATTATGGAAGAATTGCAGATAACATCCCTTCTCCTGATAAAGTTGCCACTCTTCTCAGAGCAGCAAAGATAAAGAATGTCAGGATATATGATGCTGATCACAGTGTTCTCAAGGCTTTTAGCGGGACTGGGCTTGATTTAGTGGTAGGACTTCCAAATGGATACCTGAAAGACATGAGTGCCAATGAGGACCATGCAATGGATTGGGTTAAAGAAAATGTGCAGGCGTTCCTTCCTGAGACACGAATCCGTGGGATTGCTGTGGGCAATGAAGTATTAGGTGGGACTGATTATGAATTGTGGGGAGCTCTGTTGGGTGCAGTTAAAAATATCTATAATGCAATAAAGGAGCTAGGATTAACTGATGTAGTTCAGATTACCACTGCCCATTCACAGGCTGTTTTTGCTAATTCCTTCCCTCCCTCTTCCTGTATATTCAGAGATAATGTTAAACAGCAATACATGAAGCCACTTTTGGAGTTCTTCTCAGAAATCGGGTCTCCTTTCTGTTTAAATGCTTACCCATTCCTTGCCTACATGAGTGATCCGGAGAACATTGATATTAATTATGCTCTTTTCCAGAAAACTCAGGGGATTTCTGATCCAAAGACTGACCTTCATTATGATAACATGCTTGATGCTCAGATTGATGCAGCCTATGCAGCATTGGAAGATACTGGATTCAAAAAGATGGAAGTTATCATTACAGAGACAGGGTGGGCTTCACGTGGAGATGACAGTGAAGCTGCAGCTACAGTAAATAATGCCAGGACATATAATTATAATCTACGTAAAAGGCTAGCAAAGAAAAAAGGGACCCCTCTCCGACCAAAGTCTGTAGTGAAGGCATATATTTTTGCCATATTTAATGAGAACTTGAAACCAGGGCCAACTTCTGAGAGAAATTTTGGACTGTACAAGCCTGATGGGACCATTGCATATGACATTGGGTTTCATGGACTTGTATCATCATCTGCAGATTCGTTGCGCTTATCTTCGAAGGATATTGGAGCTCGAGGCTGGTCTCGGTCGCAATACTTGATATTACCAATCTCCATGGCGGCAGCATTTCTTCTGTTTTTGAGATGA

Protein Analysis

399

Amino Acids

44.05

Weight (kDa)

7.02

Isoelectric Point (pI)

35.57

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0013518)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G26600 AT2G26600
fragaria_vesca FvH4_1g02990
malus_domestica MD02G1029300.v1.1 MD15G1170800.v1.1
prunus_persica Prupe.7G245600_v2.0.a1
pyrus_communis pycom02g02420 pycom15g15220
rosa_chinensis RchiOBHm_Chr2g0088131
rosa_laevigata RLG00000015924
rosa_multiflora Rmu_sc0003275.1_g000047
rosa_roxburghii Rroxscaffold_2G00152940
rosa_rugosa Rorug01G0481300
rosa_samantha Rh2AG036100 Rh2BG035300 Rh2CG036500 Rh2DG035800
rosa_wichuraiana Rw2G002840

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 891
AccB7I CCANNNNNTGG 1 cut(s) 307
AccIII TCCGGA 1 cut(s) 655
AciI CCGC 2 cut(s) 231, 1169
AclWI GGATC 2 cut(s) 647, 704
AcsI RAATTY 1 cut(s) 1012
AcvI CACGTG 1 cut(s) 836
AfaI GTAC 2 cut(s) 81, 1025
AfiI CCNNNNNNNGG 2 cut(s) 307, 502
AgsI TTSAA 2 cut(s) 793, 988
AjiI CACGTC 1 cut(s) 40
AjnI CCWGG 2 cut(s) 875, 991
AjuI GAANNNNNNNTTGG 2 cut(s) 566, 598
AluBI AGCT 6 cut(s) 12, 416, 460, 854, 860, 1121
AluI AGCT 6 cut(s) 12, 416, 460, 854, 860, 1121
Alw21I GWGCWC 2 cut(s) 418, 1123
Alw26I GTCTC 4 cut(s) 341, 612, 812, 1137
AlwI GGATC 2 cut(s) 647, 704
Ama87I CYCGRG 1 cut(s) 1122
Aor13HI TCCGGA 1 cut(s) 655
AoxI GGCC 1 cut(s) 995
ApeKI GCWGC 6 cut(s) 170, 761, 770, 854, 857, 1172
ApoI RAATTY 1 cut(s) 1012
AseI ATTAAT 1 cut(s) 672
Asp700I GAANNNNTTC 1 cut(s) 11
AspLEI GCGC 1 cut(s) 1098
AspS9I GGNCC 4 cut(s) 298, 924, 995, 1038
AsuII TTCGAA 1 cut(s) 1106
AsuNHI GCTAGC 1 cut(s) 907
AvaI CYCGRG 1 cut(s) 1122
AvaII GGWCC 3 cut(s) 298, 924, 1038
BanII GRGCYC 2 cut(s) 418, 1123
BbrPI CACGTG 1 cut(s) 836
BbsI GAAGAC 2 cut(s) 34, 43
Bbv12I GWGCWC 2 cut(s) 418, 1123
BbvI GCAGC 6 cut(s) 182, 773, 782, 841, 869, 1184
BccI CCATC 2 cut(s) 793, 1028
BciT130I CCWGG 2 cut(s) 877, 993
BciVI GTATCC 1 cut(s) 263
BclI TGATCA 1 cut(s) 205
BcoDI GTCTC 4 cut(s) 341, 612, 812, 1137
BfaI CTAG 2 cut(s) 461, 908
BfmI CTRYAG 4 cut(s) 855, 861, 945, 1083
BfuI GTATCC 1 cut(s) 263
BglI GCCNNNNNGGC 1 cut(s) 74
BisI GCNGC 7 cut(s) 171, 762, 771, 855, 858, 1170, 1173
BlsI GCNGC 7 cut(s) 172, 763, 772, 856, 859, 1171, 1174
Bme1390I CCNGG 2 cut(s) 877, 993
Bme18I GGWCC 3 cut(s) 298, 924, 1038
BmeT110I CYCGRG 1 cut(s) 1122
BmgBI CACGTC 1 cut(s) 40
BmgT120I GGNCC 4 cut(s) 298, 924, 995, 1038
BmiI GGNNCC 4 cut(s) 97, 925, 926, 1039
BmrFI CCNGG 2 cut(s) 877, 993
BmrI ACTGGG 1 cut(s) 246
BmsI GCATC 3 cut(s) 190, 736, 748
BmtI GCTAGC 1 cut(s) 911
BmuI ACTGGG 1 cut(s) 246
BoxI GACNNNNGTC 1 cut(s) 940
BpiI GAAGAC 2 cut(s) 34, 43
BplI GAGNNNNNCTC 2 cut(s) 578, 610
BpmI CTGGAG 1 cut(s) 114
Bpu14I TTCGAA 1 cut(s) 1106
BpuEI CTTGAG 1 cut(s) 203
BsaAI YACGTR 2 cut(s) 836, 899
BsaBI GATNNNNATC 1 cut(s) 204
BsaI GGTCTC 2 cut(s) 612, 1137
BsaJI CCNNGG 3 cut(s) 358, 992, 1164
BsaWI WCCGGW 1 cut(s) 655
Bsc4I CCNNNNNNNGG 2 cut(s) 307, 502
Bse1I ACTGG 3 cut(s) 97, 241, 790
Bse3DI GCAATG 3 cut(s) 312, 382, 1041
Bse8I GATNNNNATC 1 cut(s) 204
BseAI TCCGGA 1 cut(s) 655
BseBI CCWGG 2 cut(s) 877, 993
BseDI CCNNGG 3 cut(s) 358, 992, 1164
BseGI GGATG 1 cut(s) 132
BseJI GATNNNNATC 1 cut(s) 204
BseLI CCNNNNNNNGG 2 cut(s) 307, 502
BseMI GCAATG 3 cut(s) 312, 382, 1041
BseMII CTCAG 7 cut(s) 41, 178, 336, 609, 710, 764, 996
BseNI ACTGG 3 cut(s) 97, 241, 790
BseXI GCAGC 6 cut(s) 182, 773, 782, 841, 869, 1184
BsgI GTGCAG 2 cut(s) 350, 447
Bsh1285I CGRYCG 1 cut(s) 1139
BshFI GGCC 1 cut(s) 997
BsiEI CGRYCG 1 cut(s) 1139
BsiHKAI GWGCWC 2 cut(s) 418, 1123
BsiHKCI CYCGRG 1 cut(s) 1122
BsiSI CCGG 1 cut(s) 656
BslFI GGGAC 4 cut(s) 247, 406, 937, 1051
BslI CCNNNNNNNGG 2 cut(s) 307, 502
BsmAI GTCTC 4 cut(s) 341, 612, 812, 1137
BsmFI GGGAC 4 cut(s) 247, 406, 937, 1051
BsmI GAATGC 1 cut(s) 86
BsnI GGCC 1 cut(s) 997
Bso31I GGTCTC 2 cut(s) 612, 1137
BsoBI CYCGRG 1 cut(s) 1122
Bsp119I TTCGAA 1 cut(s) 1106
Bsp1286I GDGCHC 2 cut(s) 418, 1123
Bsp13I TCCGGA 1 cut(s) 655
Bsp1407I TGTACA 1 cut(s) 1023
Bsp143I GATC 3 cut(s) 205, 652, 709
Bsp19I CCATGG 1 cut(s) 1164
BspACI CCGC 2 cut(s) 231, 1169
BspANI GGCC 1 cut(s) 997
BspCNI CTCAG 7 cut(s) 40, 177, 337, 608, 709, 763, 997
BspEI TCCGGA 1 cut(s) 655
BspLI GGNNCC 4 cut(s) 97, 925, 926, 1039
BspMAI CTGCAG 2 cut(s) 859, 1087
BspOI GCTAGC 1 cut(s) 911
BspPI GGATC 2 cut(s) 647, 704
BspQI GCTCTTC 1 cut(s) 2
BspT104I TTCGAA 1 cut(s) 1106
BspTNI GGTCTC 2 cut(s) 612, 1137
BsrDI GCAATG 3 cut(s) 312, 382, 1041
BsrGI TGTACA 1 cut(s) 1023
BsrI ACTGG 3 cut(s) 97, 241, 790
BssECI CCNNGG 3 cut(s) 358, 992, 1164
BssMI GATC 3 cut(s) 205, 652, 709
BssT1I CCWWGG 1 cut(s) 1164
Bst2UI CCWGG 2 cut(s) 877, 993
Bst4CI ACNGT 4 cut(s) 212, 848, 865, 1023
Bst6I CTCTTC 3 cut(s) 2, 165, 538
BstAPI GCANNNNNTGC 1 cut(s) 767
BstAUI TGTACA 1 cut(s) 1023
BstBAI YACGTR 2 cut(s) 836, 899
BstBI TTCGAA 1 cut(s) 1106
BstC8I GCNNGC 2 cut(s) 333, 909
BstDEI CTNAG 7 cut(s) 27, 164, 345, 595, 696, 750, 1005
BstDSI CCRYGG 2 cut(s) 358, 1164
BstF5I GGATG 1 cut(s) 132
BstHHI GCGC 1 cut(s) 1098
BstKTI GATC 3 cut(s) 208, 655, 712
BstMAI GTCTC 4 cut(s) 341, 612, 812, 1137
BstMBI GATC 3 cut(s) 205, 652, 709
BstMCI CGRYCG 1 cut(s) 1139
BstMWI GCNNNNNNNGC 5 cut(s) 74, 83, 512, 767, 770
BstNI CCWGG 2 cut(s) 877, 993
BstNSI RCATGY 1 cut(s) 742
BstPAI GACNNNNGTC 1 cut(s) 940
BstSCI CCNGG 2 cut(s) 875, 991
BstSFI CTRYAG 4 cut(s) 855, 861, 945, 1083
BstSNI TACGTA 1 cut(s) 899
BstV1I GCAGC 6 cut(s) 182, 773, 782, 841, 869, 1184
BstV2I GAAGAC 2 cut(s) 34, 43
BsuI GTATCC 1 cut(s) 263
BsuRI GGCC 1 cut(s) 997
BtgI CCRYGG 2 cut(s) 358, 1164
BtrI CACGTC 1 cut(s) 40
BtsCI GGATG 1 cut(s) 132
BtsI GCAGTG 1 cut(s) 489
BtsIMutI CAGTG 4 cut(s) 90, 217, 489, 853
Cac8I GCNNGC 2 cut(s) 333, 909
CfoI GCGC 1 cut(s) 1098
Cfr13I GGNCC 4 cut(s) 298, 924, 995, 1038
Csp6I GTAC 2 cut(s) 80, 1024
CspCI CAANNNNNGTGG 2 cut(s) 46, 81
CviAII CATG 7 cut(s) 283, 302, 571, 646, 739, 1064, 1165
CviQI GTAC 2 cut(s) 80, 1024
DdeI CTNAG 7 cut(s) 27, 164, 345, 595, 696, 750, 1005
DpnI GATC 3 cut(s) 207, 654, 711
DpnII GATC 3 cut(s) 205, 652, 709
DraI TTTAAA 1 cut(s) 621
Eam1104I CTCTTC 3 cut(s) 2, 165, 538
EarI CTCTTC 3 cut(s) 2, 165, 538
Ecl136II GAGCTC 2 cut(s) 416, 1121
Eco105I TACGTA 1 cut(s) 899
Eco130I CCWWGG 1 cut(s) 1164
Eco24I GRGCYC 2 cut(s) 418, 1123
Eco31I GGTCTC 2 cut(s) 612, 1137
Eco47I GGWCC 3 cut(s) 298, 924, 1038
Eco53kI GAGCTC 2 cut(s) 416, 1121
Eco72I CACGTG 1 cut(s) 836
Eco88I CYCGRG 1 cut(s) 1122
EcoICRI GAGCTC 2 cut(s) 416, 1121
EcoO109I RGGNCCY 1 cut(s) 924
EcoRII CCWGG 2 cut(s) 875, 991
EcoT14I CCWWGG 1 cut(s) 1164
EcoT38I GRGCYC 2 cut(s) 418, 1123
ErhI CCWWGG 1 cut(s) 1164
FaeI CATG 7 cut(s) 286, 305, 574, 649, 742, 1067, 1168
FaqI GGGAC 4 cut(s) 247, 406, 937, 1051
FatI CATG 7 cut(s) 282, 301, 570, 645, 738, 1063, 1164
FauI CCCGC 1 cut(s) 224
FauNDI CATATG 1 cut(s) 1048
FbaI TGATCA 1 cut(s) 205
Fnu4HI GCNGC 7 cut(s) 171, 762, 771, 855, 858, 1170, 1173
FokI GGATG 1 cut(s) 119
FriOI GRGCYC 2 cut(s) 418, 1123
Fsp4HI GCNGC 7 cut(s) 171, 762, 771, 855, 858, 1170, 1173
FspBI CTAG 2 cut(s) 461, 908
GlaI GCGC 1 cut(s) 1097
GluI GCNGC 7 cut(s) 171, 762, 771, 855, 858, 1170, 1173
GsuI CTGGAG 1 cut(s) 114
HaeIII GGCC 1 cut(s) 997
HapII CCGG 1 cut(s) 656
HhaI GCGC 1 cut(s) 1098
Hin1II CATG 7 cut(s) 286, 305, 574, 649, 742, 1067, 1168
Hin6I GCGC 1 cut(s) 1096
HinP1I GCGC 1 cut(s) 1096
HinfI GANTC 3 cut(s) 354, 789, 1088
HpaII CCGG 1 cut(s) 656
Hpy188I TCNGA 8 cut(s) 167, 483, 548, 598, 709, 753, 935, 1006
Hpy188III TCNNGA 5 cut(s) 143, 190, 344, 656, 688
HpyAV CCTTC 6 cut(s) 147, 350, 532, 734, 946, 1102
HpyCH4III ACNGT 4 cut(s) 212, 848, 865, 1023
HpyCH4IV ACGT 3 cut(s) 39, 835, 898
HpyF10VI GCNNNNNNNGC 5 cut(s) 74, 83, 512, 767, 770
HpyF3I CTNAG 7 cut(s) 27, 164, 345, 595, 696, 750, 1005
HpySE526I ACGT 3 cut(s) 39, 835, 898
Hsp92II CATG 7 cut(s) 286, 305, 574, 649, 742, 1067, 1168
HspAI GCGC 1 cut(s) 1096
KflI GGGWCCC 1 cut(s) 924
Kpn2I TCCGGA 1 cut(s) 655
Ksp22I TGATCA 1 cut(s) 205
Kzo9I GATC 3 cut(s) 205, 652, 709
LguI GCTCTTC 1 cut(s) 2
LmnI GCTCC 4 cut(s) 95, 413, 457, 1118
Lsp1109I GCAGC 6 cut(s) 182, 773, 782, 841, 869, 1184
LweI GCATC 3 cut(s) 190, 736, 748
MaeI CTAG 2 cut(s) 461, 908
MaeII ACGT 3 cut(s) 39, 835, 898
MalI GATC 3 cut(s) 207, 654, 711
MboI GATC 3 cut(s) 205, 652, 709
MfeI CAATTG 1 cut(s) 63
MhlI GDGCHC 2 cut(s) 418, 1123
MluCI AATT 8 cut(s) 63, 109, 120, 404, 517, 673, 886, 1012
MmeI TCCRAC 1 cut(s) 958
MnlI CCTC 6 cut(s) 79, 289, 537, 541, 939, 1118
MroI TCCGGA 1 cut(s) 655
MroXI GAANNNNTTC 1 cut(s) 11
MseI TTAA 7 cut(s) 318, 432, 467, 558, 620, 672, 975
MspI CCGG 1 cut(s) 656
MspR9I CCNGG 2 cut(s) 877, 993
MunI CAATTG 1 cut(s) 63
Mva1269I GAATGC 1 cut(s) 86
MvaI CCWGG 2 cut(s) 877, 993
MwoI GCNNNNNNNGC 5 cut(s) 74, 83, 512, 767, 770
NcoI CCATGG 1 cut(s) 1164
NdeI CATATG 1 cut(s) 1048
NdeII GATC 3 cut(s) 205, 652, 709
NheI GCTAGC 1 cut(s) 907
NlaIII CATG 7 cut(s) 286, 305, 574, 649, 742, 1067, 1168
NlaIV GGNNCC 4 cut(s) 97, 925, 926, 1039
NspI RCATGY 1 cut(s) 742
NspV TTCGAA 1 cut(s) 1106
PaeR7I CTCGAG 1 cut(s) 1122
PciSI GCTCTTC 1 cut(s) 2
PctI GAATGC 1 cut(s) 86
PdmI GAANNNNTTC 1 cut(s) 11
PfeI GAWTC 3 cut(s) 354, 789, 1088
PflMI CCANNNNNTGG 1 cut(s) 307
PkrI GCNGC 7 cut(s) 172, 763, 772, 856, 859, 1171, 1174
PmaCI CACGTG 1 cut(s) 836
PmlI CACGTG 1 cut(s) 836
Ppu21I YACGTR 2 cut(s) 836, 899
PpuMI RGGWCCY 1 cut(s) 924
PshAI GACNNNNGTC 1 cut(s) 940
PshBI ATTAAT 1 cut(s) 672
PsiI TTATAA 1 cut(s) 891
Psp124BI GAGCTC 2 cut(s) 418, 1123
Psp5II RGGWCCY 1 cut(s) 924
Psp6I CCWGG 2 cut(s) 875, 991
PspCI CACGTG 1 cut(s) 836
PspGI CCWGG 2 cut(s) 875, 991
PspN4I GGNNCC 4 cut(s) 97, 925, 926, 1039
PspPI GGNCC 4 cut(s) 298, 924, 995, 1038
PspPPI RGGWCCY 1 cut(s) 924
PspXI VCTCGAGB 1 cut(s) 1122
PstI CTGCAG 2 cut(s) 859, 1087
RsaI GTAC 2 cut(s) 81, 1025
RsaNI GTAC 2 cut(s) 80, 1024
SacI GAGCTC 2 cut(s) 418, 1123
SapI GCTCTTC 1 cut(s) 2
SaqAI TTAA 7 cut(s) 318, 432, 467, 558, 620, 672, 975
SatI GCNGC 7 cut(s) 171, 762, 771, 855, 858, 1170, 1173
Sau3AI GATC 3 cut(s) 205, 652, 709
Sau96I GGNCC 4 cut(s) 298, 924, 995, 1038
ScrFI CCNGG 2 cut(s) 877, 993
SduI GDGCHC 2 cut(s) 418, 1123
SfaNI GCATC 3 cut(s) 190, 736, 748
SfcI CTRYAG 4 cut(s) 855, 861, 945, 1083
Sfr274I CTCGAG 1 cut(s) 1122
SfuI TTCGAA 1 cut(s) 1106
SinI GGWCC 3 cut(s) 298, 924, 1038
SlaI CTCGAG 1 cut(s) 1122
SmlI CTYRAG 2 cut(s) 218, 1122
SmoI CTYRAG 2 cut(s) 218, 1122
SnaBI TACGTA 1 cut(s) 899
Sse9I AATT 8 cut(s) 63, 109, 120, 404, 517, 673, 886, 1012
SsiI CCGC 2 cut(s) 231, 1169
SspMI CTAG 2 cut(s) 461, 908
SstI GAGCTC 2 cut(s) 418, 1123
StyD4I CCNGG 2 cut(s) 875, 991
StyI CCWWGG 1 cut(s) 1164
TaaI ACNGT 4 cut(s) 212, 848, 865, 1023
TaiI ACGT 3 cut(s) 42, 838, 901
TaqI TCGA 2 cut(s) 1106, 1123
TaqII GACCGA 1 cut(s) 1125
TasI AATT 8 cut(s) 63, 109, 120, 404, 517, 673, 886, 1012
TatI WGTACW 2 cut(s) 79, 1023
TauI GCSGC 1 cut(s) 1172
TfiI GAWTC 3 cut(s) 354, 789, 1088
Tru1I TTAA 7 cut(s) 318, 432, 467, 558, 620, 672, 975
Tru9I TTAA 7 cut(s) 318, 432, 467, 558, 620, 672, 975
TscAI CASTG 4 cut(s) 97, 217, 496, 853
TseI GCWGC 6 cut(s) 170, 761, 770, 854, 857, 1172
TspDTI ATGAA 6 cut(s) 20, 393, 417, 587, 716, 1052
TspGWI ACGGA 1 cut(s) 347
TspRI CASTG 4 cut(s) 97, 217, 496, 853
Van91I CCANNNNNTGG 1 cut(s) 307
VpaK11BI GGWCC 3 cut(s) 298, 924, 1038
VspI ATTAAT 1 cut(s) 672
XapI RAATTY 1 cut(s) 1012
XceI RCATGY 1 cut(s) 742
XhoI CTCGAG 1 cut(s) 1122
XmnI GAANNNNTTC 1 cut(s) 11
XspI CTAG 2 cut(s) 461, 908
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.