Prupe.7G262700_v2.0.a1

Methyladenine glycosylase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
OG0015324
Physical Location & Seq
Reverse (-)
21800814 .. 21805045
4232 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.7G262700.2

Sequence Viewer

Length: 1137 bp
ATGTCAGGAGCTCCGAGAGTAAGGTCTATCAATGTGGCTGATTCAGAGTCAAGGCCAGTGCTTGGACCTGCTGGGAACAAGGCAGGGACGTTCAGTGCACGAAAACCAGTTTCAAAACCACTGAGAAAGGCTGAGAAATTGGCTGAGAAGGTTGCCTCAGCTGAAGAGAAGAAAACTCGTCAATCTTCAATGCTAACTACCTCTCCTCAGCTGCATTCTCCCAGTGTTCCGTCAGTGCTTCGTCGGCACGAGCAGTTATTGCACTCAAATTTTTCACTAAATGCTTCATGTTCATCGGATGCCTCTACGGATTCGTTTCATAGTAGAGCATCTACTGGTAGGCTGACTAGGTCGAATAGTGCAGGCAGTAGGAGGAAGCAGTATGTTTCGAAGCCAAGAAGTGTTGTTTCTGATGGTGGATTGGACTCTCCTCCTGATGGTTCGCAGTCTAAGAAGAGGTGTGCTTGGGTGACGCCTAATACTGATCCATGTTATGCTGCTTTTCATGATGAAGAATGGGGGCTTCCAGTACATGATGACAAGAAACTGTTTGAGCTTCTTGTCTTATCTGGTGCTTTGGCTGAACTTTCATGGCCGGCCATTCTAAGCAAAAAGCACATCTTTAGGGAAGTGTTTGCAGACTTTGATCCCGTTGCCATCTCAAAGTTGAATGAGAAGAAGCTAATAGCACCCGGAAGCAATGCAAGTTCCCTATTGTCGGAACTAAAGTTGCGTGCTATTATTGAGAATGCACGTCAAATGACCAAGGTCATAGAAGAGTTTGGATCATTTGACAAGTATATTTGGAGCTTTGTGAATAACAAGCCTATAGTTAGCAGATTCCGGTATCCTCGGCAGGTTCCGGCAAAAACTCCAAAAGCAGATGTGATAAGCAAAGACCTCATGAGAAGGGGATTTCGAAGTGTGGGGCCAACTGTTATTTATTCTTTCATGCAGGTCGCTGGAATTACTAATGACCATCTCGTTAGTTGCTTCAGATTTCAGGAGTGCCTAAACGCAGCGGAAGGGAAGGAAGAGTATGGAATCAAGGATGAGGCTGAAAAGAAAACAGAAAATGGGATAGAATCGGACTTATCTGTTGCCATGGATGAATTGAGTTTCTCCTCAGACTTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko03410 map03410
Pfam Domains
Protein Families
Adenine_glyco

Protein Analysis

379

Amino Acids

41.71

Weight (kDa)

9.27

Isoelectric Point (pI)

53.19

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0015324)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G57970 AT5G57970
fragaria_vesca FvH4_1g00950 FvH4_1g00950
malus_domestica MD02G1007800.v1.1
prunus_persica Prupe.7G262700_v2.0.a1
pyrus_communis pycom02g00670 pycom15g13660
rosa_chinensis RchiOBHm_Chr2g0085681
rosa_laevigata RLG00000015711
rosa_multiflora Rmu_sc0007631.1_g000006
rosa_roxburghii Rroxscaffold_2G00155130
rosa_rugosa Rorug01G0462200
rosa_samantha Rh2BG011900 Rh2CG012700
rosa_wichuraiana Rw2G001010

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 3 cut(s) 76, 847, 946
AccB7I CCANNNNNTGG 1 cut(s) 62
AciI CCGC 1 cut(s) 1022
AclWI GGATC 3 cut(s) 479, 641, 793
AcoI YGGCCR 2 cut(s) 593, 597
AcsI RAATTY 1 cut(s) 268
AcuI CTGAAG 2 cut(s) 183, 979
AcyI GRCGYC 1 cut(s) 473
AfaI GTAC 1 cut(s) 531
AfiI CCNNNNNNNGG 3 cut(s) 62, 437, 718
AgsI TTSAA 3 cut(s) 114, 189, 670
AjiI CACGTC 1 cut(s) 755
AluBI AGCT 6 cut(s) 11, 161, 211, 556, 682, 810
AluI AGCT 6 cut(s) 11, 161, 211, 556, 682, 810
Alw21I GWGCWC 2 cut(s) 13, 100
Alw44I GTGCAC 1 cut(s) 96
AlwI GGATC 3 cut(s) 479, 641, 793
AoxI GGCC 4 cut(s) 53, 593, 597, 929
ApaLI GTGCAC 1 cut(s) 96
ApeKI GCWGC 3 cut(s) 211, 497, 1019
ApoI RAATTY 1 cut(s) 268
AspS9I GGNCC 2 cut(s) 65, 929
AsuC2I CCSGG 1 cut(s) 693
AsuHPI GGTGA 1 cut(s) 481
AsuII TTCGAA 2 cut(s) 389, 919
AvaII GGWCC 1 cut(s) 65
BaeGI GKGCMC 1 cut(s) 100
BanII GRGCYC 1 cut(s) 13
BauI CACGAG 1 cut(s) 248
Bbv12I GWGCWC 2 cut(s) 13, 100
BbvCI CCTCAGC 2 cut(s) 157, 207
BbvI GCAGC 3 cut(s) 198, 484, 1031
BccI CCATC 4 cut(s) 407, 431, 665, 987
BciVI GTATCC 1 cut(s) 858
BcnI CCSGG 1 cut(s) 693
BfaI CTAG 1 cut(s) 348
BfmI CTRYAG 1 cut(s) 828
BfuAI ACCTGC 3 cut(s) 76, 847, 946
BfuI GTATCC 1 cut(s) 858
BisI GCNGC 3 cut(s) 212, 498, 1020
BlsI GCNGC 3 cut(s) 213, 499, 1021
Bme1390I CCNGG 1 cut(s) 693
Bme18I GGWCC 1 cut(s) 65
BmgBI CACGTC 1 cut(s) 755
BmgT120I GGNCC 2 cut(s) 65, 929
BmiI GGNNCC 2 cut(s) 861, 930
BmrFI CCNGG 1 cut(s) 693
BmrI ACTGGG 1 cut(s) 216
BmsI GCATC 2 cut(s) 289, 338
BmuI ACTGGG 1 cut(s) 216
BoxI GACNNNNGTC 1 cut(s) 767
Bpu10I CCTNAGC 2 cut(s) 157, 207
Bpu14I TTCGAA 2 cut(s) 389, 919
BpuMI CCSGG 1 cut(s) 693
BsaHI GRCGYC 1 cut(s) 473
BsaJI CCNNGG 3 cut(s) 765, 851, 1104
BsaWI WCCGGW 1 cut(s) 843
BsaXI ACNNNNNCTCC 2 cut(s) 187, 217
Bsc4I CCNNNNNNNGG 3 cut(s) 62, 437, 718
Bse118I RCCGGY 1 cut(s) 595
Bse1I ACTGG 5 cut(s) 56, 107, 222, 340, 527
Bse3DI GCAATG 1 cut(s) 706
BseDI CCNNGG 3 cut(s) 765, 851, 1104
BseGI GGATG 3 cut(s) 304, 1057, 1114
BseLI CCNNNNNNNGG 3 cut(s) 62, 437, 718
BseMI GCAATG 1 cut(s) 706
BseMII CTCAG 5 cut(s) 113, 123, 135, 171, 221
BseNI ACTGG 5 cut(s) 56, 107, 222, 340, 527
BseRI GAGGAG 3 cut(s) 195, 420, 1114
BseSI GKGCMC 1 cut(s) 100
BseXI GCAGC 3 cut(s) 198, 484, 1031
BseYI CCCAGC 1 cut(s) 71
BsgI GTGCAG 1 cut(s) 381
BshFI GGCC 4 cut(s) 55, 595, 599, 931
BsiHKAI GWGCWC 2 cut(s) 13, 100
BsiSI CCGG 4 cut(s) 596, 693, 844, 863
BslFI GGGAC 1 cut(s) 100
BslI CCNNNNNNNGG 3 cut(s) 62, 437, 718
BsmFI GGGAC 1 cut(s) 100
BsmI GAATGC 2 cut(s) 214, 754
BsnI GGCC 4 cut(s) 55, 595, 599, 931
Bsp119I TTCGAA 2 cut(s) 389, 919
Bsp1286I GDGCHC 2 cut(s) 13, 100
Bsp143I GATC 3 cut(s) 484, 646, 785
Bsp19I CCATGG 1 cut(s) 1104
BspACI CCGC 1 cut(s) 1022
BspANI GGCC 4 cut(s) 55, 595, 599, 931
BspCNI CTCAG 5 cut(s) 114, 124, 136, 170, 220
BspHI TCATGA 2 cut(s) 505, 903
BspLI GGNNCC 2 cut(s) 861, 930
BspMI ACCTGC 3 cut(s) 76, 847, 946
BspPI GGATC 3 cut(s) 479, 641, 793
BspT104I TTCGAA 2 cut(s) 389, 919
BsrDI GCAATG 1 cut(s) 706
BsrFI RCCGGY 1 cut(s) 595
BsrI ACTGG 5 cut(s) 56, 107, 222, 340, 527
BssAI RCCGGY 1 cut(s) 595
BssECI CCNNGG 3 cut(s) 765, 851, 1104
BssMI GATC 3 cut(s) 484, 646, 785
BssNI GRCGYC 1 cut(s) 473
BssSI CACGAG 1 cut(s) 248
BssT1I CCWWGG 2 cut(s) 765, 1104
Bst2BI CACGAG 1 cut(s) 248
Bst4CI ACNGT 2 cut(s) 549, 937
Bst6I CTCTTC 4 cut(s) 159, 449, 771, 1029
BstACI GRCGYC 1 cut(s) 473
BstAPI GCANNNNNTGC 1 cut(s) 259
BstBI TTCGAA 2 cut(s) 389, 919
BstC8I GCNNGC 3 cut(s) 364, 597, 735
BstDEI CTNAG 8 cut(s) 122, 132, 144, 157, 207, 450, 605, 1126
BstDSI CCRYGG 1 cut(s) 1104
BstF5I GGATG 3 cut(s) 304, 1057, 1114
BstKTI GATC 3 cut(s) 487, 649, 788
BstMBI GATC 3 cut(s) 484, 646, 785
BstMWI GCNNNNNNNGC 2 cut(s) 244, 259
BstPAI GACNNNNGTC 1 cut(s) 767
BstSCI CCNGG 1 cut(s) 691
BstSFI CTRYAG 1 cut(s) 828
BstSLI GKGCMC 1 cut(s) 100
BstV1I GCAGC 3 cut(s) 198, 484, 1031
BsuI GTATCC 1 cut(s) 858
BsuRI GGCC 4 cut(s) 55, 595, 599, 931
BtgI CCRYGG 1 cut(s) 1104
BtrI CACGTC 1 cut(s) 755
BtsCI GGATG 3 cut(s) 304, 1057, 1114
BtsIMutI CAGTG 5 cut(s) 63, 100, 119, 229, 240
BveI ACCTGC 3 cut(s) 76, 847, 946
Cac8I GCNNGC 3 cut(s) 364, 597, 735
CciI TCATGA 2 cut(s) 505, 903
Cfr10I RCCGGY 1 cut(s) 595
Cfr13I GGNCC 2 cut(s) 65, 929
CseI GACGC 1 cut(s) 481
Csp6I GTAC 1 cut(s) 530
CviAII CATG 8 cut(s) 288, 489, 506, 533, 591, 904, 952, 1105
CviQI GTAC 1 cut(s) 530
DdeI CTNAG 8 cut(s) 122, 132, 144, 157, 207, 450, 605, 1126
DpnI GATC 3 cut(s) 486, 648, 787
DpnII GATC 3 cut(s) 484, 646, 785
EaeI YGGCCR 2 cut(s) 593, 597
Eam1104I CTCTTC 4 cut(s) 159, 449, 771, 1029
EarI CTCTTC 4 cut(s) 159, 449, 771, 1029
Ecl136II GAGCTC 1 cut(s) 11
Eco130I CCWWGG 2 cut(s) 765, 1104
Eco24I GRGCYC 1 cut(s) 13
Eco47I GGWCC 1 cut(s) 65
Eco53kI GAGCTC 1 cut(s) 11
Eco57I CTGAAG 2 cut(s) 183, 979
EcoICRI GAGCTC 1 cut(s) 11
EcoT14I CCWWGG 2 cut(s) 765, 1104
EcoT38I GRGCYC 1 cut(s) 13
ErhI CCWWGG 2 cut(s) 765, 1104
FaeI CATG 8 cut(s) 291, 492, 509, 536, 594, 907, 955, 1108
FalI AAGNNNNNCTT 2 cut(s) 605, 637
FaqI GGGAC 1 cut(s) 100
FatI CATG 8 cut(s) 287, 488, 505, 532, 590, 903, 951, 1104
Fnu4HI GCNGC 3 cut(s) 212, 498, 1020
FokI GGATG 3 cut(s) 311, 1064, 1121
FriOI GRGCYC 1 cut(s) 13
FseI GGCCGGCC 1 cut(s) 599
Fsp4HI GCNGC 3 cut(s) 212, 498, 1020
FspBI CTAG 1 cut(s) 348
GluI GCNGC 3 cut(s) 212, 498, 1020
GsaI CCCAGC 1 cut(s) 75
HaeIII GGCC 4 cut(s) 55, 595, 599, 931
HapII CCGG 4 cut(s) 596, 693, 844, 863
HgaI GACGC 1 cut(s) 481
Hin1I GRCGYC 1 cut(s) 473
Hin1II CATG 8 cut(s) 291, 492, 509, 536, 594, 907, 955, 1108
HinfI GANTC 7 cut(s) 41, 47, 311, 425, 840, 1044, 1085
HpaII CCGG 4 cut(s) 596, 693, 844, 863
HphI GGTGA 1 cut(s) 481
Hpy166II GTNNAC 1 cut(s) 98
Hpy188I TCNGA 8 cut(s) 15, 46, 298, 412, 721, 998, 1090, 1129
Hpy188III TCNNGA 5 cut(s) 6, 434, 506, 904, 1004
Hpy8I GTNNAC 1 cut(s) 98
Hpy99I CGWCG 1 cut(s) 246
HpyAV CCTTC 4 cut(s) 142, 903, 1019, 1024
HpyCH4III ACNGT 2 cut(s) 549, 937
HpyCH4IV ACGT 2 cut(s) 89, 754
HpyCH4V TGCA 8 cut(s) 98, 214, 262, 362, 638, 704, 752, 955
HpyF10VI GCNNNNNNNGC 2 cut(s) 244, 259
HpyF3I CTNAG 8 cut(s) 122, 132, 144, 157, 207, 450, 605, 1126
HpySE526I ACGT 2 cut(s) 89, 754
Hsp92I GRCGYC 1 cut(s) 473
Hsp92II CATG 8 cut(s) 291, 492, 509, 536, 594, 907, 955, 1108
KroI GCCGGC 1 cut(s) 595
KroNI GCCGGC 1 cut(s) 597
Kzo9I GATC 3 cut(s) 484, 646, 785
LmnI GCTCC 3 cut(s) 8, 16, 807
Lsp1109I GCAGC 3 cut(s) 198, 484, 1031
LweI GCATC 2 cut(s) 289, 338
MaeI CTAG 1 cut(s) 348
MaeII ACGT 2 cut(s) 89, 754
MaeIII GTNAC 1 cut(s) 469
MalI GATC 3 cut(s) 486, 648, 787
MboI GATC 3 cut(s) 484, 646, 785
MboII GAAGA 8 cut(s) 176, 177, 181, 466, 524, 688, 788, 1046
MhlI GDGCHC 2 cut(s) 13, 100
MluCI AATT 4 cut(s) 137, 268, 966, 1112
MlyI GAGTC 2 cut(s) 56, 419
MmeI TCCRAC 1 cut(s) 699
MroNI GCCGGC 1 cut(s) 595
MspA1I CMGCKG 3 cut(s) 161, 211, 1022
MspI CCGG 4 cut(s) 596, 693, 844, 863
MspR9I CCNGG 1 cut(s) 693
Mva1269I GAATGC 2 cut(s) 214, 754
MwoI GCNNNNNNNGC 2 cut(s) 244, 259
NaeI GCCGGC 1 cut(s) 597
NciI CCSGG 1 cut(s) 693
NcoI CCATGG 1 cut(s) 1104
NdeII GATC 3 cut(s) 484, 646, 785
NgoMIV GCCGGC 1 cut(s) 595
NlaIII CATG 8 cut(s) 291, 492, 509, 536, 594, 907, 955, 1108
NlaIV GGNNCC 2 cut(s) 861, 930
NmeAIII GCCGAG 1 cut(s) 832
NmuCI GTSAC 1 cut(s) 469
NspV TTCGAA 2 cut(s) 389, 919
PagI TCATGA 2 cut(s) 505, 903
PctI GAATGC 2 cut(s) 214, 754
PdiI GCCGGC 1 cut(s) 597
PfeI GAWTC 5 cut(s) 41, 311, 840, 1044, 1085
PflFI GACNNNGTC 1 cut(s) 349
PflMI CCANNNNNTGG 1 cut(s) 62
PkrI GCNGC 3 cut(s) 213, 499, 1021
PleI GAGTC 2 cut(s) 55, 419
PpsI GAGTC 2 cut(s) 55, 419
PshAI GACNNNNGTC 1 cut(s) 767
Psp124BI GAGCTC 1 cut(s) 13
PspFI CCCAGC 1 cut(s) 71
PspN4I GGNNCC 2 cut(s) 861, 930
PspPI GGNCC 2 cut(s) 65, 929
PsyI GACNNNGTC 1 cut(s) 349
PvuII CAGCTG 2 cut(s) 161, 211
RigI GGCCGGCC 1 cut(s) 599
RsaI GTAC 1 cut(s) 531
RsaNI GTAC 1 cut(s) 530
SacI GAGCTC 1 cut(s) 13
SatI GCNGC 3 cut(s) 212, 498, 1020
Sau3AI GATC 3 cut(s) 484, 646, 785
Sau96I GGNCC 2 cut(s) 65, 929
SchI GAGTC 2 cut(s) 56, 419
ScrFI CCNGG 1 cut(s) 693
SduI GDGCHC 2 cut(s) 13, 100
SfaNI GCATC 2 cut(s) 289, 338
SfcI CTRYAG 1 cut(s) 828
SfuI TTCGAA 2 cut(s) 389, 919
SinI GGWCC 1 cut(s) 65
Sse9I AATT 4 cut(s) 137, 268, 966, 1112
SsiI CCGC 1 cut(s) 1022
SspMI CTAG 1 cut(s) 348
SstI GAGCTC 1 cut(s) 13
StyD4I CCNGG 1 cut(s) 691
StyI CCWWGG 2 cut(s) 765, 1104
TaaI ACNGT 2 cut(s) 549, 937
TaiI ACGT 2 cut(s) 92, 757
TaqI TCGA 3 cut(s) 353, 389, 919
TasI AATT 4 cut(s) 137, 268, 966, 1112
TatI WGTACW 1 cut(s) 529
TfiI GAWTC 5 cut(s) 41, 311, 840, 1044, 1085
TscAI CASTG 5 cut(s) 63, 100, 126, 229, 240
TseFI GTSAC 1 cut(s) 469
TseI GCWGC 3 cut(s) 211, 497, 1019
Tsp45I GTSAC 1 cut(s) 469
TspDTI ATGAA 8 cut(s) 276, 282, 308, 494, 525, 579, 940, 1125
TspGWI ACGGA 2 cut(s) 219, 323
TspRI CASTG 5 cut(s) 63, 100, 126, 229, 240
Tth111I GACNNNGTC 1 cut(s) 349
Van91I CCANNNNNTGG 1 cut(s) 62
VneI GTGCAC 1 cut(s) 96
VpaK11BI GGWCC 1 cut(s) 65
XapI RAATTY 1 cut(s) 268
XspI CTAG 1 cut(s) 348
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.