Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0005659

Physical Location & Seq

Genomic Coordinates Reverse (-)

21839904 .. 21844361

Gene Structure 4458 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G263800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 690 bp

ATGGCCAAGAAATCTGTAACACAACGAAGGTTAACAAAACTTGATGTCTACCTATACATACCCAATATAATTGGGTACATAAGGGTTCTTATGAACTGTTTTGCGTTTGCTCAGTGCTTCTCCAACAAGCAGCTTTTCTCTATTCTCTATTTTGTCAGCTTTGTCTGTGATGGCGTAGATGGTTGGTGTGCTCGTAAATTCAATCAAGTTTCAACCTTTGGAGCTGTTTTGGACATGGTGACAGATAGGATAAGCACTGCGTGTCTCTTGGTAGTTCTTTCACAAGTATACCGGCCTGGCTTTGTTTTCCTTTCATTGCTTGCCTTAGATATTGCCAGCCACTGGCTGCAGATGTACAGTACTTTCCTGTTAGGCAAGGCTAGTCACAAGGATGTGAAAGACAGCACTAATTGGCTTTTTAAAGCATACTACGGGAATCGGATGTTTATGGCTTACTGTTGTGTAGCTTGTGAGGTGCTTTATATAATTCTATTTCTTCTTGCAAAGAACGAAACCGAGAGCTTGATTGATGTCTTAACTGGACTTGCAAAGCATATTACACCTCTTTCTGTTCTTGTTGGTTTGAGTTTATTTGGATGGGCCGTCAAGCAAGCAGTCAATCTTATACAGTTGAAGACAGCAGCAGATGTGTGCGTGCTTCATGATATCAACAAAAAGCAGAGCCCCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0003881 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005794 GO:0006629 GO:0006644 GO:0006793 GO:0006796 GO:0008150 GO:0008152 GO:0008610 GO:0008654 GO:0009058 GO:0009987 GO:0012505 GO:0016020 GO:0016740 GO:0016772 GO:0016780 GO:0017169 GO:0019637 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044424 GO:0044444 GO:0044464 GO:0071704 GO:0090407 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00562 ko00564 ko01100 ko04070 map00562 map00564 map01100 map04070

Pfam Domains

Protein Families

CDP-OH_P_transf

Protein Analysis

230

Amino Acids

25.83

Weight (kDa)

9.02

Isoelectric Point (pI)

32.86

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0005659)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G68000 AT4G38570 AT4G38570 AT4G38570 AT4G38570
fragaria_vesca	FvH4_2g13710 FvH4_2g13710 FvH4_2g13710 FvH4_2g14000
malus_domestica	MD05G1122300.v1.1 MD10G1124800.v1.1
prunus_persica	Prupe.7G263800_v2.0.a1
pyrus_communis	pycom05g11610 pycom10g10710
rosa_chinensis	RchiOBHm_Chr7g0224781
rosa_laevigata	RLG00000001854 RLG00000034638
rosa_multiflora	Rmu_sc0000144.1_g000011 Rmu_sc0010368.1_g000002
rosa_roxburghii	Rroxscaffold_3G00234380 Rroxscaffold_3G00238490
rosa_rugosa	Rorug05G0250800 Rorug05G0250800 Rorug07G0225600 Rorug07G0225600
rosa_samantha	Rh5CG362500 Rh7CG396200
rosa_wichuraiana	Rw7G031360

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	342
AccI	GTMKAC	2 cut(s)	48, 288
AcoI	YGGCCR	1 cut(s)	3
AcsI	RAATTY	1 cut(s)	197
AdeI	CACNNNGTG	1 cut(s)	261
AfaI	GTAC	3 cut(s)	77, 356, 361
AfiI	CCNNNNNNNGG	1 cut(s)	342
AgsI	TTSAA	3 cut(s)	202, 213, 634
AjnI	CCWGG	1 cut(s)	295
AluBI	AGCT	5 cut(s)	133, 159, 224, 467, 522
AluI	AGCT	5 cut(s)	133, 159, 224, 467, 522
Alw21I	GWGCWC	1 cut(s)	193
Alw26I	GTCTC	1 cut(s)	269
AlwNI	CAGNNNCTG	1 cut(s)	342
AoxI	GGCC	3 cut(s)	3, 293, 600
ApeKI	GCWGC	3 cut(s)	130, 346, 641
ApoI	RAATTY	1 cut(s)	197
AspS9I	GGNCC	1 cut(s)	600
AsuHPI	GGTGA	1 cut(s)	250
BalI	TGGCCA	1 cut(s)	5
BanII	GRGCYC	1 cut(s)	686
BbsI	GAAGAC	1 cut(s)	641
Bbv12I	GWGCWC	1 cut(s)	193
BbvI	GCAGC	3 cut(s)	142, 333, 653
BccI	CCATC	3 cut(s)	164, 173, 591
BceAI	ACGGC	1 cut(s)	587
BciT130I	CCWGG	1 cut(s)	297
BcoDI	GTCTC	1 cut(s)	269
BfaI	CTAG	1 cut(s)	381
BfmI	CTRYAG	1 cut(s)	347
BisI	GCNGC	3 cut(s)	131, 347, 642
BlsI	GCNGC	3 cut(s)	132, 348, 643
BmcAI	AGTACT	1 cut(s)	361
Bme1390I	CCNGG	1 cut(s)	297
BmgT120I	GGNCC	1 cut(s)	600
BmrFI	CCNGG	1 cut(s)	297
BpiI	GAAGAC	1 cut(s)	641
Bsc4I	CCNNNNNNNGG	1 cut(s)	342
Bse118I	RCCGGY	1 cut(s)	291
Bse1I	ACTGG	2 cut(s)	347, 544
Bse3DI	GCAATG	1 cut(s)	314
BseBI	CCWGG	1 cut(s)	297
BseGI	GGATG	3 cut(s)	397, 447, 602
BseLI	CCNNNNNNNGG	1 cut(s)	342
BseMI	GCAATG	1 cut(s)	314
BseMII	CTCAG	1 cut(s)	125
BseNI	ACTGG	2 cut(s)	347, 544
BseXI	GCAGC	3 cut(s)	142, 333, 653
BshFI	GGCC	3 cut(s)	5, 295, 602
BsiHKAI	GWGCWC	1 cut(s)	193
BsiSI	CCGG	1 cut(s)	292
BslI	CCNNNNNNNGG	1 cut(s)	342
BsmAI	GTCTC	1 cut(s)	269
BsnI	GGCC	3 cut(s)	5, 295, 602
Bsp1286I	GDGCHC	2 cut(s)	193, 686
Bsp1407I	TGTACA	1 cut(s)	354
BspANI	GGCC	3 cut(s)	5, 295, 602
BspCNI	CTCAG	1 cut(s)	124
BspHI	TCATGA	1 cut(s)	661
BspMAI	CTGCAG	1 cut(s)	351
BsrDI	GCAATG	1 cut(s)	314
BsrFI	RCCGGY	1 cut(s)	291
BsrGI	TGTACA	1 cut(s)	354
BsrI	ACTGG	2 cut(s)	347, 544
BssAI	RCCGGY	1 cut(s)	291
BssNAI	GTATAC	1 cut(s)	289
Bst1107I	GTATAC	1 cut(s)	289
Bst2UI	CCWGG	1 cut(s)	297
Bst4CI	ACNGT	4 cut(s)	98, 359, 458, 630
BstAUI	TGTACA	1 cut(s)	354
BstC8I	GCNNGC	4 cut(s)	321, 337, 612, 656
BstDEI	CTNAG	2 cut(s)	111, 325
BstF5I	GGATG	3 cut(s)	397, 447, 602
BstMAI	GTCTC	1 cut(s)	269
BstNI	CCWGG	1 cut(s)	297
BstSCI	CCNGG	1 cut(s)	295
BstSFI	CTRYAG	1 cut(s)	347
BstV1I	GCAGC	3 cut(s)	142, 333, 653
BstV2I	GAAGAC	1 cut(s)	641
BstZ17I	GTATAC	1 cut(s)	289
BsuRI	GGCC	3 cut(s)	5, 295, 602
BtsCI	GGATG	3 cut(s)	397, 447, 602
BtsI	GCAGTG	1 cut(s)	255
BtsIMutI	CAGTG	3 cut(s)	119, 255, 340
Cac8I	GCNNGC	4 cut(s)	321, 337, 612, 656
CaiI	CAGNNNCTG	1 cut(s)	342
CciI	TCATGA	1 cut(s)	661
Cfr10I	RCCGGY	1 cut(s)	291
Cfr13I	GGNCC	1 cut(s)	600
Csp6I	GTAC	3 cut(s)	76, 355, 360
CviAII	CATG	2 cut(s)	235, 662
CviQI	GTAC	3 cut(s)	76, 355, 360
DdeI	CTNAG	2 cut(s)	111, 325
DraI	TTTAAA	1 cut(s)	421
DraIII	CACNNNGTG	1 cut(s)	261
EaeI	YGGCCR	1 cut(s)	3
Eco24I	GRGCYC	1 cut(s)	686
Eco32I	GATATC	1 cut(s)	667
EcoRII	CCWGG	1 cut(s)	295
EcoRV	GATATC	1 cut(s)	667
EcoT38I	GRGCYC	1 cut(s)	686
FaeI	CATG	2 cut(s)	238, 665
FatI	CATG	2 cut(s)	234, 661
FblI	GTMKAC	2 cut(s)	48, 288
Fnu4HI	GCNGC	3 cut(s)	131, 347, 642
FokI	GGATG	3 cut(s)	404, 454, 609
FriOI	GRGCYC	1 cut(s)	686
Fsp4HI	GCNGC	3 cut(s)	131, 347, 642
FspBI	CTAG	1 cut(s)	381
GluI	GCNGC	3 cut(s)	131, 347, 642
HaeIII	GGCC	3 cut(s)	5, 295, 602
HapII	CCGG	1 cut(s)	292
Hin1II	CATG	2 cut(s)	238, 665
HincII	GTYRAC	1 cut(s)	33
HindII	GTYRAC	1 cut(s)	33
HinfI	GANTC	1 cut(s)	436
HpaI	GTTAAC	1 cut(s)	33
HpaII	CCGG	1 cut(s)	292
HphI	GGTGA	1 cut(s)	250
Hpy166II	GTNNAC	3 cut(s)	33, 49, 289
Hpy188I	TCNGA	1 cut(s)	441
Hpy188III	TCNNGA	1 cut(s)	662
Hpy8I	GTNNAC	3 cut(s)	33, 49, 289
HpyAV	CCTTC	1 cut(s)	21
HpyCH4III	ACNGT	4 cut(s)	98, 359, 458, 630
HpyCH4V	TGCA	3 cut(s)	349, 503, 548
HpyF3I	CTNAG	2 cut(s)	111, 325
Hsp92II	CATG	2 cut(s)	238, 665
KspAI	GTTAAC	1 cut(s)	33
LmnI	GCTCC	1 cut(s)	221
LpnPI	CCDG	7 cut(s)	282, 305, 309, 328, 349, 380, 525
Lsp1109I	GCAGC	3 cut(s)	142, 333, 653
MaeI	CTAG	1 cut(s)	381
MaeIII	GTNAC	3 cut(s)	16, 238, 383
MboII	GAAGA	2 cut(s)	488, 646
MhlI	GDGCHC	2 cut(s)	193, 686
MlsI	TGGCCA	1 cut(s)	5
MluCI	AATT	4 cut(s)	69, 197, 409, 486
MluNI	TGGCCA	1 cut(s)	5
MmeI	TCCRAC	1 cut(s)	147
MnlI	CCTC	2 cut(s)	466, 573
Mox20I	TGGCCA	1 cut(s)	5
MscI	TGGCCA	1 cut(s)	5
MseI	TTAA	3 cut(s)	32, 420, 536
MslI	CAYNNNNRTG	1 cut(s)	390
Msp20I	TGGCCA	1 cut(s)	5
MspI	CCGG	1 cut(s)	292
MspR9I	CCNGG	1 cut(s)	297
MvaI	CCWGG	1 cut(s)	297
NlaIII	CATG	2 cut(s)	238, 665
NmuCI	GTSAC	2 cut(s)	238, 383
PagI	TCATGA	1 cut(s)	661
PfeI	GAWTC	1 cut(s)	436
PflMI	CCANNNNNTGG	1 cut(s)	342
PkrI	GCNGC	3 cut(s)	132, 348, 643
Psp6I	CCWGG	1 cut(s)	295
PspGI	CCWGG	1 cut(s)	295
PspPI	GGNCC	1 cut(s)	600
PstI	CTGCAG	1 cut(s)	351
PstNI	CAGNNNCTG	1 cut(s)	342
RsaI	GTAC	3 cut(s)	77, 356, 361
RsaNI	GTAC	3 cut(s)	76, 355, 360
RseI	CAYNNNNRTG	1 cut(s)	390
SaqAI	TTAA	3 cut(s)	32, 420, 536
SatI	GCNGC	3 cut(s)	131, 347, 642
Sau96I	GGNCC	1 cut(s)	600
ScaI	AGTACT	1 cut(s)	361
ScrFI	CCNGG	1 cut(s)	297
SduI	GDGCHC	2 cut(s)	193, 686
SfcI	CTRYAG	1 cut(s)	347
SmiMI	CAYNNNNRTG	1 cut(s)	390
Sse9I	AATT	4 cut(s)	69, 197, 409, 486
SspMI	CTAG	1 cut(s)	381
StyD4I	CCNGG	1 cut(s)	295
TaaI	ACNGT	4 cut(s)	98, 359, 458, 630
TasI	AATT	4 cut(s)	69, 197, 409, 486
TatI	WGTACW	2 cut(s)	354, 359
TfiI	GAWTC	1 cut(s)	436
Tru1I	TTAA	3 cut(s)	32, 420, 536
Tru9I	TTAA	3 cut(s)	32, 420, 536
TscAI	CASTG	3 cut(s)	119, 262, 347
TseFI	GTSAC	2 cut(s)	238, 383
TseI	GCWGC	3 cut(s)	130, 346, 641
Tsp45I	GTSAC	2 cut(s)	238, 383
TspDTI	ATGAA	3 cut(s)	107, 303, 650
TspRI	CASTG	3 cut(s)	119, 262, 347
Van91I	CCANNNNNTGG	1 cut(s)	342
XapI	RAATTY	1 cut(s)	197
XmiI	GTMKAC	2 cut(s)	48, 288
XspI	CTAG	1 cut(s)	381
ZrmI	AGTACT	1 cut(s)	361

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.