Prupe.7G268500_v2.0.a1

Acetolactate synthase small subunit

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
Physical Location & Seq
Forward (+)
22090762 .. 22095692
4931 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.7G268500.1

Sequence Viewer

Length: 1485 bp
ATGGCATTGGCGGCGACCATTTCTTCAGCTCATCCCTCTCCGAAACTGTCTTCGTTTTCGTCGGAGCATCCTCCTCTAGCCTTAGGGTTCTCTGATTCTCTAGCGTTTCCTTCGACGGGTTCAGGTGGTACTTGGAGATCAATAAGCCACAGCTATGATCGCAATAAGCAGCAACTCGCCGTCTCTGCTAGAAGCTTCGACGAGAAAATCGCAGATAAAGCCTTCTCTTCAAACGGCTCTTCTCCTTTGGCCAGCCGCTCCAAGGTAAGAAGGCACGCGATTTCAGTATTCGTTGGGGATGAAAGTGGAATGATAAATCGGATAGCAGGGGTGTTTGCGAGGAGGGGTTACAACATCGAGTCGTTGGCTGTGGGTCTAAATAAGGACAAAGCACTCTTCACTATAGTTGTCTCTGGAACCGAAACGGTGTTACGCCAAGTGATTGAGCAACTTAACAAGCTTGTCAATGTTCTCAAGGTTGAAGATCTCTCCAATGAGCCGCAGGTAGAACGTGAACTAATGCTTATAAAAGTTAATGCCGATCCAAGTTACCGTGCTGAGATAAAGTGGTTAGTGAATATCTTTAGAGCAAAAATTGTGGATATCTCAGAACACTCAGTAACCATCGAGGTGACAGGAGATCCTGGGAAGATGGTTGCTCTGCAACGAAATTTTAGCAAGTTCGGGATCAAAGAAGTTGCAAGAACCGGAAAGATTGCCTTGAGGAGGGAAAAGCTGGGTGCATCTGCTCCATTTTGGCGATATTCAGCAGCTTCATATCCAGATCTTGAGAGAACAGTTCCTGTTGATGCTCTTGTGGGGGATGAAAACAGATTAGCTAATGCTGAATCTGATATATCTTCGGGGGGTGATGTTTATCCCGTGGAGCCATCTGATACCTTTACTGTCAATCAAGTTCTTGATGCTCACTGGGGTGTTCTCAATGACGAAGATACTAGTGGACTTCGATCACACACTTTATCCATGCTTGTGAATGATGTTCCTGGGGTTCTTTACATTGTTACCGGCGTTTTTGCTCGAAGGGGTTATAACATTCAGAGTTTAGCTGTTGGCCATGCAGAAGTTGAGGGGCTCTCTCGCATTACTACTGTTGTTCCTGGTACAGACGAATCAATTAGCAAGTTGGTGCAGCAGCTTTATAAACTTGCCGATATTCATGATGTTCAAGATCTTACCAACTTGCCATTTGCTGAGCGGGAATTGATGTTGATAAAAATTGCTGCAAATGCTGTTGCTCGAAGAGATGTGCTTGATATTGGCAACATTTTTAGGGCCAAGGCTGTTGACGTCTCTGACCACACAATAACCCTTGAGCTTACGGGAGACCTGAACAAGATGGTTGCACTGCAGAGGTTGTTAGAGCCCTATGGCATTTGTGAGGTGGCACGCACTGGACGAATTGCGCTGGTGCGTGAGTCAGGTGTGGATTCCAAACACCTCCGTGGATACTCTTTTCCTCTGTAG

Protein Analysis

495

Amino Acids

53.97

Weight (kDa)

6.44

Isoelectric Point (pI)

41.15

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0009864)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 3 cut(s) 527, 1050, 1161
AatII GACGTC 1 cut(s) 1311
Acc36I ACCTGC 1 cut(s) 493
AccBSI CCGCTC 2 cut(s) 258, 1216
AccII CGCG 1 cut(s) 278
AciI CCGC 4 cut(s) 11, 256, 500, 1216
AclWI GGATC 3 cut(s) 536, 635, 695
AcoI YGGCCR 2 cut(s) 249, 1072
AcsI RAATTY 1 cut(s) 670
AcuI CTGAAG 1 cut(s) 9
AcyI GRCGYC 1 cut(s) 1308
AfaI GTAC 2 cut(s) 130, 1123
AfiI CCNNNNNNNGG 3 cut(s) 116, 262, 726
AgsI TTSAA 3 cut(s) 231, 482, 1187
AhlI ACTAGT 1 cut(s) 956
AjnI CCWGG 3 cut(s) 643, 1003, 1117
AleI CACNNNNGTG 2 cut(s) 933, 1461
Alw26I GTCTC 4 cut(s) 187, 415, 1315, 1338
AlwI GGATC 3 cut(s) 536, 635, 695
AlwNI CAGNNNCTG 1 cut(s) 803
AoxI GGCC 3 cut(s) 249, 1072, 1293
ApeKI GCWGC 5 cut(s) 169, 770, 1150, 1153, 1241
ApoI RAATTY 1 cut(s) 670
AspLEI GCGC 1 cut(s) 1426
AspS9I GGNCC 1 cut(s) 1293
AsuHPI GGTGA 2 cut(s) 643, 881
AxyI CCTNAGG 1 cut(s) 82
BalI TGGCCA 2 cut(s) 251, 1074
BanII GRGCYC 2 cut(s) 1095, 1386
BbsI GAAGAC 1 cut(s) 42
BbvI GCAGC 5 cut(s) 181, 782, 1162, 1165, 1228
BccI CCATC 4 cut(s) 632, 646, 898, 1351
BceAI ACGGC 2 cut(s) 164, 250
BciT130I CCWGG 3 cut(s) 645, 1005, 1119
BciVI GTATCC 1 cut(s) 1460
BcoDI GTCTC 4 cut(s) 187, 415, 1315, 1338
BcuI ACTAGT 1 cut(s) 956
BfaI CTAG 4 cut(s) 77, 101, 189, 957
BfmI CTRYAG 3 cut(s) 402, 1367, 1481
BfuAI ACCTGC 1 cut(s) 493
BfuI GTATCC 1 cut(s) 1460
BglII AGATCT 3 cut(s) 484, 784, 1189
BisI GCNGC 8 cut(s) 12, 170, 256, 500, 771, 1151, 1154, 1242
BlpI GCTNAGC 1 cut(s) 1212
BlsI GCNGC 8 cut(s) 13, 171, 257, 501, 772, 1152, 1155, 1243
Bme1390I CCNGG 3 cut(s) 645, 1005, 1119
BmgT120I GGNCC 1 cut(s) 1293
BmiI GGNNCC 2 cut(s) 418, 888
BmrFI CCNGG 3 cut(s) 645, 1005, 1119
BmrI ACTGGG 1 cut(s) 940
BmsI GCATC 4 cut(s) 76, 752, 799, 913
BmuI ACTGGG 1 cut(s) 940
BpiI GAAGAC 1 cut(s) 42
BplI GAGNNNNNCTC 2 cut(s) 1079, 1111
Bpu1102I GCTNAGC 1 cut(s) 1212
BpuEI CTTGAG 4 cut(s) 458, 742, 809, 1352
BsaBI GATNNNNATC 1 cut(s) 876
BsaHI GRCGYC 1 cut(s) 1308
BsaI GGTCTC 1 cut(s) 1338
BsaJI CCNNGG 6 cut(s) 261, 644, 882, 1004, 1296, 1462
BsaWI WCCGGW 1 cut(s) 707
Bsc4I CCNNNNNNNGG 3 cut(s) 116, 262, 726
Bse118I RCCGGY 1 cut(s) 1025
Bse1I ACTGG 2 cut(s) 935, 1417
Bse21I CCTNAGG 1 cut(s) 82
Bse8I GATNNNNATC 1 cut(s) 876
BseBI CCWGG 3 cut(s) 645, 1005, 1119
BseDI CCNNGG 6 cut(s) 261, 644, 882, 1004, 1296, 1462
BseGI GGATG 4 cut(s) 31, 67, 304, 829
BseJI GATNNNNATC 1 cut(s) 876
BseLI CCNNNNNNNGG 3 cut(s) 116, 262, 726
BseMII CTCAG 4 cut(s) 549, 621, 630, 1203
BseNI ACTGG 2 cut(s) 935, 1417
BseRI GAGGAG 3 cut(s) 63, 355, 739
BseXI GCAGC 5 cut(s) 181, 782, 1162, 1165, 1228
BseYI CCCAGC 1 cut(s) 736
BsgI GTGCAG 1 cut(s) 1169
Bsh1236I CGCG 1 cut(s) 278
BshFI GGCC 3 cut(s) 251, 1074, 1295
BsiSI CCGG 2 cut(s) 708, 1026
BslI CCNNNNNNNGG 3 cut(s) 116, 262, 726
BsmAI GTCTC 4 cut(s) 187, 415, 1315, 1338
BsmBI CGTCTC 2 cut(s) 187, 1315
BsnI GGCC 3 cut(s) 251, 1074, 1295
Bso31I GGTCTC 1 cut(s) 1338
Bsp1286I GDGCHC 2 cut(s) 1095, 1386
Bsp143I GATC 9 cut(s) 137, 157, 484, 541, 640, 687, 784, 968, 1189
Bsp1720I GCTNAGC 1 cut(s) 1212
BspACI CCGC 4 cut(s) 11, 256, 500, 1216
BspANI GGCC 3 cut(s) 251, 1074, 1295
BspCNI CTCAG 4 cut(s) 550, 620, 629, 1204
BspFNI CGCG 1 cut(s) 278
BspHI TCATGA 1 cut(s) 1177
BspLI GGNNCC 2 cut(s) 418, 888
BspMAI CTGCAG 1 cut(s) 1371
BspMI ACCTGC 1 cut(s) 493
BspPI GGATC 3 cut(s) 536, 635, 695
BspQI GCTCTTC 1 cut(s) 244
BspTNI GGTCTC 1 cut(s) 1338
BsrBI CCGCTC 2 cut(s) 258, 1216
BsrFI RCCGGY 1 cut(s) 1025
BsrI ACTGG 2 cut(s) 935, 1417
BssAI RCCGGY 1 cut(s) 1025
BssECI CCNNGG 6 cut(s) 261, 644, 882, 1004, 1296, 1462
BssMI GATC 9 cut(s) 137, 157, 484, 541, 640, 687, 784, 968, 1189
BssNI GRCGYC 1 cut(s) 1308
BssT1I CCWWGG 2 cut(s) 261, 1296
Bst2UI CCWGG 3 cut(s) 645, 1005, 1119
Bst4CI ACNGT 6 cut(s) 48, 427, 554, 799, 907, 1111
Bst6I CTCTTC 4 cut(s) 232, 244, 401, 1255
BstACI GRCGYC 1 cut(s) 1308
BstC8I GCNNGC 3 cut(s) 253, 276, 1408
BstDEI CTNAG 5 cut(s) 82, 558, 607, 616, 1212
BstDSI CCRYGG 2 cut(s) 882, 1462
BstENI CCTNNNNNAGG 1 cut(s) 724
BstF5I GGATG 4 cut(s) 31, 67, 304, 829
BstFNI CGCG 1 cut(s) 278
BstHHI GCGC 1 cut(s) 1426
BstKTI GATC 9 cut(s) 140, 160, 487, 544, 643, 690, 787, 971, 1192
BstMAI GTCTC 4 cut(s) 187, 415, 1315, 1338
BstMBI GATC 9 cut(s) 137, 157, 484, 541, 640, 687, 784, 968, 1189
BstMWI GCNNNNNNNGC 5 cut(s) 11, 159, 185, 218, 1247
BstNI CCWGG 3 cut(s) 645, 1005, 1119
BstSCI CCNGG 3 cut(s) 643, 1003, 1117
BstSFI CTRYAG 3 cut(s) 402, 1367, 1481
BstUI CGCG 1 cut(s) 278
BstV1I GCAGC 5 cut(s) 181, 782, 1162, 1165, 1228
BstV2I GAAGAC 1 cut(s) 42
BstX2I RGATCY 4 cut(s) 484, 640, 784, 1189
BstYI RGATCY 4 cut(s) 484, 640, 784, 1189
Bsu36I CCTNAGG 1 cut(s) 82
BsuI GTATCC 1 cut(s) 1460
BsuRI GGCC 3 cut(s) 251, 1074, 1295
BtgI CCRYGG 2 cut(s) 882, 1462
BtsCI GGATG 4 cut(s) 31, 67, 304, 829
BtsI GCAGTG 1 cut(s) 1364
BtsIMutI CAGTG 3 cut(s) 928, 1364, 1410
BveI ACCTGC 1 cut(s) 493
Cac8I GCNNGC 3 cut(s) 253, 276, 1408
CaiI CAGNNNCTG 1 cut(s) 803
CciI TCATGA 1 cut(s) 1177
CfoI GCGC 1 cut(s) 1426
Cfr10I RCCGGY 1 cut(s) 1025
Cfr13I GGNCC 1 cut(s) 1293
Csp6I GTAC 2 cut(s) 129, 1122
CspCI CAANNNNNGTGG 2 cut(s) 579, 614
CviAII CATG 3 cut(s) 985, 1076, 1178
CviQI GTAC 2 cut(s) 129, 1122
DdeI CTNAG 5 cut(s) 82, 558, 607, 616, 1212
DpnI GATC 9 cut(s) 139, 159, 486, 543, 642, 689, 786, 970, 1191
DpnII GATC 9 cut(s) 137, 157, 484, 541, 640, 687, 784, 968, 1189
EaeI YGGCCR 2 cut(s) 249, 1072
Eam1104I CTCTTC 4 cut(s) 232, 244, 401, 1255
EarI CTCTTC 4 cut(s) 232, 244, 401, 1255
Eco130I CCWWGG 2 cut(s) 261, 1296
Eco24I GRGCYC 2 cut(s) 1095, 1386
Eco31I GGTCTC 1 cut(s) 1338
Eco32I GATATC 1 cut(s) 604
Eco57I CTGAAG 1 cut(s) 9
Eco81I CCTNAGG 1 cut(s) 82
EcoNI CCTNNNNNAGG 1 cut(s) 724
EcoRII CCWGG 3 cut(s) 643, 1003, 1117
EcoRV GATATC 1 cut(s) 604
EcoT14I CCWWGG 2 cut(s) 261, 1296
EcoT38I GRGCYC 2 cut(s) 1095, 1386
ErhI CCWWGG 2 cut(s) 261, 1296
Esp3I CGTCTC 2 cut(s) 187, 1315
FaeI CATG 3 cut(s) 988, 1079, 1181
FalI AAGNNNNNCTT 2 cut(s) 704, 736
FatI CATG 3 cut(s) 984, 1075, 1177
FauI CCCGC 1 cut(s) 1209
Fnu4HI GCNGC 8 cut(s) 12, 170, 256, 500, 771, 1151, 1154, 1242
FokI GGATG 4 cut(s) 18, 54, 311, 836
FriOI GRGCYC 2 cut(s) 1095, 1386
Fsp4HI GCNGC 8 cut(s) 12, 170, 256, 500, 771, 1151, 1154, 1242
FspBI CTAG 4 cut(s) 77, 101, 189, 957
GlaI GCGC 1 cut(s) 1425
GluI GCNGC 8 cut(s) 12, 170, 256, 500, 771, 1151, 1154, 1242
GsaI CCCAGC 1 cut(s) 740
HaeIII GGCC 3 cut(s) 251, 1074, 1295
HapII CCGG 2 cut(s) 708, 1026
HhaI GCGC 1 cut(s) 1426
Hin1I GRCGYC 1 cut(s) 1308
Hin1II CATG 3 cut(s) 988, 1079, 1181
Hin6I GCGC 1 cut(s) 1424
HinP1I GCGC 1 cut(s) 1424
HincII GTYRAC 1 cut(s) 1306
HindII GTYRAC 1 cut(s) 1306
HindIII AAGCTT 2 cut(s) 193, 458
HinfI GANTC 6 cut(s) 95, 359, 848, 1130, 1436, 1448
HpaII CCGG 2 cut(s) 708, 1026
HphI GGTGA 2 cut(s) 643, 881
Hpy166II GTNNAC 3 cut(s) 515, 962, 1306
Hpy188I TCNGA 9 cut(s) 42, 64, 94, 321, 610, 853, 895, 1059, 1315
Hpy188III TCNNGA 7 cut(s) 414, 685, 782, 788, 920, 1178, 1187
Hpy8I GTNNAC 3 cut(s) 515, 962, 1306
Hpy99I CGWCG 3 cut(s) 64, 118, 203
HpyAV CCTTC 4 cut(s) 120, 232, 264, 1035
HpyCH4III ACNGT 6 cut(s) 48, 427, 554, 799, 907, 1111
HpyCH4IV ACGT 2 cut(s) 511, 1308
HpyCH4V TGCA 8 cut(s) 664, 701, 743, 1079, 1150, 1244, 1364, 1369
HpyF10VI GCNNNNNNNGC 5 cut(s) 11, 159, 185, 218, 1247
HpyF3I CTNAG 5 cut(s) 82, 558, 607, 616, 1212
HpySE526I ACGT 2 cut(s) 511, 1308
Hsp92I GRCGYC 1 cut(s) 1308
Hsp92II CATG 3 cut(s) 988, 1079, 1181
HspAI GCGC 1 cut(s) 1424
Kzo9I GATC 9 cut(s) 137, 157, 484, 541, 640, 687, 784, 968, 1189
LguI GCTCTTC 1 cut(s) 244
LmnI GCTCC 4 cut(s) 64, 263, 754, 886
Lsp1109I GCAGC 5 cut(s) 181, 782, 1162, 1165, 1228
LweI GCATC 4 cut(s) 76, 752, 799, 913
MaeI CTAG 4 cut(s) 77, 101, 189, 957
MaeII ACGT 2 cut(s) 511, 1308
MaeIII GTNAC 6 cut(s) 347, 429, 548, 619, 631, 1021
MalI GATC 9 cut(s) 139, 159, 486, 543, 642, 689, 786, 970, 1191
MbiI CCGCTC 2 cut(s) 258, 1216
MboI GATC 9 cut(s) 137, 157, 484, 541, 640, 687, 784, 968, 1189
MflI RGATCY 4 cut(s) 484, 640, 784, 1189
MhlI GDGCHC 2 cut(s) 1095, 1386
MlsI TGGCCA 2 cut(s) 251, 1074
MluCI AATT 6 cut(s) 594, 670, 1134, 1220, 1236, 1419
MluNI TGGCCA 2 cut(s) 251, 1074
MlyI GAGTC 2 cut(s) 368, 1445
MmeI TCCRAC 1 cut(s) 42
Mox20I TGGCCA 2 cut(s) 251, 1074
MscI TGGCCA 2 cut(s) 251, 1074
MseI TTAA 2 cut(s) 453, 534
MslI CAYNNNNRTG 5 cut(s) 153, 629, 933, 989, 1461
Msp20I TGGCCA 2 cut(s) 251, 1074
MspI CCGG 2 cut(s) 708, 1026
MspR9I CCNGG 3 cut(s) 645, 1005, 1119
MvaI CCWGG 3 cut(s) 645, 1005, 1119
MvnI CGCG 1 cut(s) 278
MwoI GCNNNNNNNGC 5 cut(s) 11, 159, 185, 218, 1247
NdeII GATC 9 cut(s) 137, 157, 484, 541, 640, 687, 784, 968, 1189
NlaIII CATG 3 cut(s) 988, 1079, 1181
NlaIV GGNNCC 2 cut(s) 418, 888
NmuCI GTSAC 1 cut(s) 631
OliI CACNNNNGTG 2 cut(s) 933, 1461
PagI TCATGA 1 cut(s) 1177
PciSI GCTCTTC 1 cut(s) 244
PcsI WCGNNNNNNNCGW 1 cut(s) 1414
PfeI GAWTC 4 cut(s) 95, 848, 1130, 1448
PkrI GCNGC 8 cut(s) 13, 171, 257, 501, 772, 1152, 1155, 1243
PleI GAGTC 2 cut(s) 367, 1444
PpsI GAGTC 2 cut(s) 367, 1444
PsiI TTATAA 3 cut(s) 527, 1050, 1161
Psp6I CCWGG 3 cut(s) 643, 1003, 1117
PspFI CCCAGC 1 cut(s) 736
PspGI CCWGG 3 cut(s) 643, 1003, 1117
PspN4I GGNNCC 2 cut(s) 418, 888
PspPI GGNCC 1 cut(s) 1293
PstI CTGCAG 1 cut(s) 1371
PstNI CAGNNNCTG 1 cut(s) 803
PsuI RGATCY 4 cut(s) 484, 640, 784, 1189
RsaI GTAC 2 cut(s) 130, 1123
RsaNI GTAC 2 cut(s) 129, 1122
RseI CAYNNNNRTG 5 cut(s) 153, 629, 933, 989, 1461
SapI GCTCTTC 1 cut(s) 244
SaqAI TTAA 2 cut(s) 453, 534
SatI GCNGC 8 cut(s) 12, 170, 256, 500, 771, 1151, 1154, 1242
Sau3AI GATC 9 cut(s) 137, 157, 484, 541, 640, 687, 784, 968, 1189
Sau96I GGNCC 1 cut(s) 1293
SchI GAGTC 2 cut(s) 368, 1445
ScrFI CCNGG 3 cut(s) 645, 1005, 1119
SduI GDGCHC 2 cut(s) 1095, 1386
SfaNI GCATC 4 cut(s) 76, 752, 799, 913
SfcI CTRYAG 3 cut(s) 402, 1367, 1481
SmiMI CAYNNNNRTG 5 cut(s) 153, 629, 933, 989, 1461
SmlI CTYRAG 4 cut(s) 473, 721, 788, 1331
SmoI CTYRAG 4 cut(s) 473, 721, 788, 1331
SpeI ACTAGT 1 cut(s) 956
Sse9I AATT 6 cut(s) 594, 670, 1134, 1220, 1236, 1419
SsiI CCGC 4 cut(s) 11, 256, 500, 1216
SspMI CTAG 4 cut(s) 77, 101, 189, 957
StyD4I CCNGG 3 cut(s) 643, 1003, 1117
StyI CCWWGG 2 cut(s) 261, 1296
TaaI ACNGT 6 cut(s) 48, 427, 554, 799, 907, 1111
TaiI ACGT 2 cut(s) 514, 1311
TaqI TCGA 7 cut(s) 113, 198, 357, 627, 967, 1039, 1258
TasI AATT 6 cut(s) 594, 670, 1134, 1220, 1236, 1419
TauI GCSGC 3 cut(s) 14, 258, 502
TfiI GAWTC 4 cut(s) 95, 848, 1130, 1448
Tru1I TTAA 2 cut(s) 453, 534
Tru9I TTAA 2 cut(s) 453, 534
TscAI CASTG 3 cut(s) 935, 1371, 1417
TseFI GTSAC 1 cut(s) 631
TseI GCWGC 5 cut(s) 169, 770, 1150, 1153, 1241
Tsp45I GTSAC 1 cut(s) 631
TspDTI ATGAA 4 cut(s) 315, 765, 840, 1166
TspGWI ACGGA 1 cut(s) 1451
TspRI CASTG 3 cut(s) 935, 1371, 1417
XagI CCTNNNNNAGG 1 cut(s) 724
XapI RAATTY 1 cut(s) 670
XspI CTAG 4 cut(s) 77, 101, 189, 957
ZraI GACGTC 1 cut(s) 1309
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.