Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000001

Orthogroup ID

OG0009864

Physical Location & Seq

Genomic Coordinates Reverse (-)

55016289 .. 55020542

Gene Structure 4254 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug01G0456100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2994 bp

ATGGCGGCCGATTCAAATTCCGGCGATCCAATCTCCGACTACGGCCGCACCCAGCGGATCGTGCTCCTAATCGACCTAAACCCACTCCTCCATCTCCAAGACCCAACCCCATTTCTCACCTCTCTCCTCTCCTCCATCAAAACCCTAACCTCCTTCCCTCCTCTCTCTTTCTCTCTCTTCGCCTTCAGGCCCTTCTTCTCGTCTCTCTCTCCTCTCCTCTCCTCCTCCAAGCTCCCCGCTTCCTCTCTCTCCCTCTCCTTCAACCCCCCGGACTCTACTTTCCTCTCGCTCTCTCAAACCCTAGCCTCTCTCTCCTTTGACCGGAACCCTAGCTTGACCGGATCCGACTCGCCGCGGGCTTCGTTCGTCGCGGCGGCGATGCGGCAACTCGTCCACGACTACGCTTGGGACGCGCCGATCTGCGATCCGGCGACCGGTACGTTTTCGAATTGTGGTGCTTTGAGGTCTAATTTGGTTGTCCTGTTTTCGCCGGTGTGTGGGTCTTTGAAATTTGTGAGTGAGTTCTTGAATGTGGGAGTGGGTGATGAGTGTTTGGGAGATTTGAATGAGTTTTGTGAGAGATTTCGAGCGGTTTTCGAGAATGTGGATGAGGCATTTGGTAGTAGAGATATTCAATTGAGTTGGGTTGATGTGAGGTATGAATTGGAGTGTGGTGAGAATAAGGTTGGATTGAAATGTGGTTTTTTCGAGAGGGGGATTGAGAGTTTAGGATGGGGGTTTTGCTCCTCTGATTCGATTGTGCTTGGTTCGGCTCTTGTTCCGTTTGGTTTGATTTATCCAGAGATTGGGGTTTCGTCGCAGATTTTTGGGGATCATAGTAAGAAGGTTAGAGGGCAATTGAGTCTTGAAATATCAGATGTTATGGGGATGCCTTTGGAGGGCAAGTTTTGTGATCTTGAGTTGGCTGAGTTGAAAATGTTGCCTAGAAGTAGAGCTGATGATGGTTTGTTTTCCGTGGAAAGCATGAAGTCGCAAGCAAGAGGTCATGAGGTGAAGAGGCTGTTCTGGGGAAGTGTTGGCAATGGAGTGTCGAAGATTCAGGTTAAGGCTTTGCAAAAGGACAGTGAGTTTGTGAAATTCAAGGGGCGGTTATCGGATCCGATTCTTGTCTATGAAGTTTCAGGAAGAGATGGGAAAGAAGTTTGTGGTGGTGTTTTTGTAGATAAGGTTCTTGAAATGCTATCAGTGGAATTGGGTGAGTTTTTACCGAGGAAATTGGCGCCTGTTTGGCAGATTGTCTTGAGTTTTTTATACAGGGACGGTTGCTGGGCATTGGTGTCTATTTCAAATGATAGTGGTGTATCGCATACTGGAATCCTTAAGCCTTTTACAATTTCTTCAGCTCTTTTGTTTATTTTGGATGAAGGATTTCACCCTCACAAAAAAGGGCATGGCATTGGTGCAGTGAATGTGGGTCAATCTCGTCCAAAGATGAACCATAAGATATGCAAACCTGATGTTGATTTGAACAACTTGTGCGGGTCTCAAACTGAGCCTACACCATCTGATAAGCATTCTGCAGAGATTGATGGAAAGAAGAAAAGTAGCAAAAGAAATTCACATTCACTCCAAGACCTCACCTGGAGTGCTTTCTGTAAGGCAGCATTTGAATATTCAGACTTACATTTGGAAGAGGTTTACTTTGCCAGGCAACGCAGCAGCTCAAAAAAGTTGAAATTTCTGAAATGCTGGATGAAACAGATAAAAAAAGTGAAGTATCCAATAACGGAGGAGTCCAAGGCACACCAGGAAAACCAAAAGGAGATGGGCAATAGGTTGGATGTGTTGCAGCAAGAGAGTGAACAACCGATGTCATCATCTGGTTCAGCTGGAGAAAATTCTTTGACTGTGGCTTTGGGAGTACAGGATGAAGCTGCTCAGGAATATAGATTAGAAACCTCGGAAGCTTTTTTCAGTAATTTCTCCAATAAGATTCGACAAGGGCTTGAATCTGAAGCAGTAGACTTGGGGGCTTTCGCACATCGGCTTGTGAGTCAATCTATATCTTTGTTGAATCAAAAGCATAGCACAACAACCCCTTCAGAGAATCAAACTCTTGTAAAATCTGACAATATTGATGATTTGGTTGCTGCTGAGCTGTTAGAACTTTTACTCAGAGATCCCAAGGATATGGTTGCAACGCACAAAAGCTATGACCCATCTTTTCAAGCATCTGATCCAGGATCTGAAGGATTTACTTCAGAAATAATAGTTCGAGAATATGAATTACAGATATTTTTCCGCATGGAGATTTTACAATCAGAAGTTGGAGCAAGTATCAAAGATTCTGTGAAACAGAAGTTTGTGAAACATATTTGCATGCTTTTGGAGACCATTCGTGTTCGATGTCATCTGGAGGGAGGCTTCTTTGGTGACTGGACCCTAGAAAATTATGCTGGAAAGATTATAAAAAGCAGGTACTGTCAGACTCTTGAAGATGTGGTTCATAAAATTTACACAAAAATGGATCTGTTGCTGTTTGATGATGAGGAAGAACTCTCTAATAATCTATTCAACAGCGAGGATAGCAATCAATCCTACAGAGAAAAACCAGGGAAAGATGAGGTGGGTGAAAATAGTAGAATCAAGGAATTAGTATCAGCAGAAGATGAATCCCCTGATCTGGGAAAACATTACAATGGAAGACCAAGTGCTCAAGTGGTTAAACAAGAGGAGCATGCTCGCAAGTTGATTGAAGCTCAAGAGAGTAGAGAGAGGGCTAGGAGATTTGCTTCTTTTACAAGTAGGGTAGCTGATTTGCAGCGAGTTTGGGCCCCAAAACAGCCTAAGGCGTTCAAGCCAAAATCAAATTCTCTTCCAAAGCCGGCTAAGAGGAAGGACCATACAGATTCCTATTATGAGAGAGTATTAGAAACCCCAATGACAGAAAATAAACGAATCCACATCGATGATGAAGATTACCAAGACTATGGAAGCCGTTCTGTTTCTAAATCATTGTTTCAGGATGACTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0003984 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005777 GO:0005829 GO:0005948 GO:0006082 GO:0006520 GO:0006549 GO:0006573 GO:0006807 GO:0008150 GO:0008152 GO:0008652 GO:0009058 GO:0009081 GO:0009082 GO:0009097 GO:0009099 GO:0009507 GO:0009536 GO:0009987 GO:0016053 GO:0016740 GO:0016744 GO:0019752 GO:0032991 GO:0042579 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0043621 GO:0044237 GO:0044238 GO:0044249 GO:0044281 GO:0044283 GO:0044424 GO:0044444 GO:0044464 GO:0046394 GO:0050790 GO:0065007 GO:0065009 GO:0071704 GO:1901564 GO:1901566 GO:1901576 GO:1901605 GO:1901607 GO:1902494 GO:1990234

KEGG Pathways

Metabolic & Signaling

ko00290 ko00650 ko00660 ko00770 ko01100 ko01110 ko01130 ko01210 ko01230 map00290 map00650 map00660 map00770 map01100 map01110 map01130 map01210 map01230

Pfam Domains

Protein Families

ACT ACT_5 ALS_ss_C

Protein Analysis

997

Amino Acids

111.43

Weight (kDa)

5.68

Isoelectric Point (pI)

43.89

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009864)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G31810 AT2G31810 AT2G31810
fragaria_vesca	FvH4_1g00350 FvH4_1g00350
malus_domestica	MD02G1002700.v1.1 MD15G1145900.v1.1
prunus_persica	Prupe.7G268500_v2.0.a1
pyrus_communis	pycom15g13110
rosa_chinensis	RchiOBHm_Chr2g0084781
rosa_laevigata	RLG00000015638
rosa_multiflora	Rmu_sc0002352.1_g000002
rosa_roxburghii	Rroxscaffold_2G00155820
rosa_rugosa	Rorug01G0456000 Rorug01G0456100 Rorug01G0456200
rosa_samantha	Rh2AG003300 Rh2BG004900 Rh2CG005300 Rh2DG004700
rosa_wichuraiana	Rw2G000380

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2429
Acc36I	ACCTGC	1 cut(s)	2427
AccB1I	GGYRCC	1 cut(s)	1240
AccB7I	CCANNNNNTGG	1 cut(s)	806
AccBSI	CCGCTC	1 cut(s)	590
AccI	GTMKAC	1 cut(s)	1983
AccII	CGCG	3 cut(s)	355, 371, 413
AcoI	YGGCCR	2 cut(s)	6, 43
AcsI	RAATTY	8 cut(s)	16, 509, 1097, 1576, 1697, 1858, 2472, 2830
AcuI	CTGAAG	6 cut(s)	169, 1344, 1995, 2046, 2205, 2229
AcyI	GRCGYC	1 cut(s)	1241
AfaI	GTAC	3 cut(s)	439, 1884, 2441
AfiI	CCNNNNNNNGG	7 cut(s)	321, 434, 497, 806, 899, 2644, 2645
AflII	CTTAAG	1 cut(s)	1340
AgeI	ACCGGT	1 cut(s)	434
AjnI	CCWGG	5 cut(s)	1601, 1667, 1767, 2200, 2572
AjuI	GAANNNNNNNTTGG	2 cut(s)	2815, 2847
Alw21I	GWGCWC	2 cut(s)	66, 2677
Alw26I	GTCTC	3 cut(s)	207, 1509, 2345
AlwNI	CAGNNNCTG	2 cut(s)	2207, 2442
AoxI	GGCC	4 cut(s)	6, 43, 188, 2793
ApaI	GGGCCC	1 cut(s)	2797
ApeKI	GCWGC	7 cut(s)	1622, 1677, 1680, 1810, 1895, 2111, 2782
ApoI	RAATTY	8 cut(s)	16, 509, 1097, 1576, 1697, 1858, 2472, 2830
ArsI	GACNNNNNNTTYG	4 cut(s)	1073, 1105, 1858, 1890
AsiGI	ACCGGT	1 cut(s)	434
Asp700I	GAANNNNTTC	2 cut(s)	1389, 2959
AspLEI	GCGC	2 cut(s)	415, 1243
AspS9I	GGNCC	5 cut(s)	189, 2400, 2793, 2794, 2860
AsuC2I	CCSGG	1 cut(s)	269
AsuHPI	GGTGA	9 cut(s)	109, 554, 686, 1024, 1229, 1385, 1591, 2405, 2603
AsuII	TTCGAA	1 cut(s)	446
AvaII	GGWCC	2 cut(s)	2400, 2860
AxyI	CCTNAGG	1 cut(s)	2808
BaeGI	GKGCMC	1 cut(s)	2797
BamHI	GGATCC	2 cut(s)	341, 1117
BanI	GGYRCC	1 cut(s)	1240
BanII	GRGCYC	1 cut(s)	2797
BbsI	GAAGAC	1 cut(s)	2671
Bbv12I	GWGCWC	2 cut(s)	66, 2677
BbvI	GCAGC	7 cut(s)	1634, 1689, 1692, 1822, 1882, 2098, 2794
BccI	CCATC	9 cut(s)	99, 143, 726, 956, 1145, 1531, 1544, 1780, 2188
BceAI	ACGGC	2 cut(s)	58, 2943
BciT130I	CCWGG	5 cut(s)	1603, 1669, 1769, 2202, 2574
BciVI	GTATCC	1 cut(s)	1749
BcnI	CCSGG	1 cut(s)	269
BcoDI	GTCTC	3 cut(s)	207, 1509, 2345
BfaI	CTAG	6 cut(s)	302, 330, 945, 2405, 2742, 2992
BfmI	CTRYAG	2 cut(s)	1539, 2560
BfoI	RGCGCY	1 cut(s)	1244
BfrI	CTTAAG	1 cut(s)	1340
BfuAI	ACCTGC	1 cut(s)	2427
BfuI	GTATCC	1 cut(s)	1749
BglI	GCCNNNNNGGC	1 cut(s)	1249
BlpI	GCTNAGC	1 cut(s)	2115
Bme1390I	CCNGG	6 cut(s)	269, 1603, 1669, 1769, 2202, 2574
Bme18I	GGWCC	2 cut(s)	2400, 2860
BmgT120I	GGNCC	5 cut(s)	189, 2400, 2793, 2794, 2860
BmiI	GGNNCC	7 cut(s)	326, 343, 1119, 1242, 2402, 2795, 2796
BmrFI	CCNGG	6 cut(s)	269, 1603, 1669, 1769, 2202, 2574
BmsI	GCATC	3 cut(s)	369, 879, 2201
BpiI	GAAGAC	1 cut(s)	2671
BpmI	CTGGAG	3 cut(s)	1624, 1872, 2396
Bpu10I	CCTNAGC	1 cut(s)	1899
Bpu1102I	GCTNAGC	1 cut(s)	2115
Bpu14I	TTCGAA	1 cut(s)	446
BpuEI	CTTGAG	4 cut(s)	938, 1282, 2661, 2706
BpuMI	CCSGG	1 cut(s)	269
Bsa29I	ATCGAT	1 cut(s)	2928
BsaBI	GATNNNNATC	1 cut(s)	2550
BsaHI	GRCGYC	1 cut(s)	1241
BsaI	GGTCTC	2 cut(s)	1509, 2345
BsaJI	CCNNGG	8 cut(s)	267, 353, 975, 1229, 1758, 1920, 2145, 2573
BsaWI	WCCGGW	3 cut(s)	321, 338, 434
BsaXI	ACNNNNNCTCC	4 cut(s)	890, 920, 1572, 1602
Bsc4I	CCNNNNNNNGG	7 cut(s)	321, 434, 497, 806, 899, 2644, 2645
Bse118I	RCCGGY	3 cut(s)	434, 490, 2845
Bse1I	ACTGG	2 cut(s)	1336, 2402
Bse21I	CCTNAGG	1 cut(s)	2808
Bse3DI	GCAATG	1 cut(s)	1048
Bse8I	GATNNNNATC	1 cut(s)	2550
BseBI	CCWGG	5 cut(s)	1603, 1669, 1769, 2202, 2574
BseCI	ATCGAT	1 cut(s)	2928
BseDI	CCNNGG	8 cut(s)	267, 353, 975, 1229, 1758, 1920, 2145, 2573
BseGI	GGATG	8 cut(s)	613, 737, 894, 1387, 1719, 1807, 1894, 2992
BseJI	GATNNNNATC	1 cut(s)	2550
BseLI	CCNNNNNNNGG	7 cut(s)	321, 434, 497, 806, 899, 2644, 2645
BseMI	GCAATG	1 cut(s)	1048
BseMII	CTCAG	5 cut(s)	918, 1503, 1913, 2106, 2149
BseNI	ACTGG	2 cut(s)	1336, 2402
BseSI	GKGCMC	1 cut(s)	2797
BseX3I	CGGCCG	2 cut(s)	6, 43
BseXI	GCAGC	7 cut(s)	1634, 1689, 1692, 1822, 1882, 2098, 2794
BseYI	CCCAGC	2 cut(s)	51, 1287
BsgI	GTGCAG	1 cut(s)	1443
Bsh1236I	CGCG	3 cut(s)	355, 371, 413
Bsh1285I	CGRYCG	3 cut(s)	9, 46, 435
BshFI	GGCC	4 cut(s)	8, 45, 190, 2795
BshNI	GGYRCC	1 cut(s)	1240
BshTI	ACCGGT	1 cut(s)	434
BshVI	ATCGAT	1 cut(s)	2928
BsiEI	CGRYCG	3 cut(s)	9, 46, 435
BsiHKAI	GWGCWC	2 cut(s)	66, 2677
BsiSI	CCGG	8 cut(s)	21, 269, 322, 339, 428, 435, 491, 2846
BslFI	GGGAC	2 cut(s)	422, 1292
BslI	CCNNNNNNNGG	7 cut(s)	321, 434, 497, 806, 899, 2644, 2645
BsmAI	GTCTC	3 cut(s)	207, 1509, 2345
BsmBI	CGTCTC	1 cut(s)	207
BsmFI	GGGAC	2 cut(s)	422, 1292
BsmI	GAATGC	1 cut(s)	1534
BsnI	GGCC	4 cut(s)	8, 45, 190, 2795
Bso31I	GGTCTC	2 cut(s)	1509, 2345
Bsp119I	TTCGAA	1 cut(s)	446
Bsp120I	GGGCCC	1 cut(s)	2793
Bsp1286I	GDGCHC	3 cut(s)	66, 2677, 2797
Bsp1720I	GCTNAGC	1 cut(s)	2115
BspANI	GGCC	4 cut(s)	8, 45, 190, 2795
BspCNI	CTCAG	5 cut(s)	919, 1504, 1912, 2107, 2148
BspDI	ATCGAT	1 cut(s)	2928
BspFNI	CGCG	3 cut(s)	355, 371, 413
BspHI	TCATGA	1 cut(s)	1006
BspLI	GGNNCC	7 cut(s)	326, 343, 1119, 1242, 2402, 2795, 2796
BspMAI	CTGCAG	1 cut(s)	1543
BspMI	ACCTGC	1 cut(s)	2427
BspT104I	TTCGAA	1 cut(s)	446
BspT107I	GGYRCC	1 cut(s)	1240
BspTI	CTTAAG	1 cut(s)	1340
BspTNI	GGTCTC	2 cut(s)	1509, 2345
BsrBI	CCGCTC	1 cut(s)	590
BsrDI	GCAATG	1 cut(s)	1048
BsrFI	RCCGGY	3 cut(s)	434, 490, 2845
BsrI	ACTGG	2 cut(s)	1336, 2402
BssAI	RCCGGY	3 cut(s)	434, 490, 2845
BssECI	CCNNGG	8 cut(s)	267, 353, 975, 1229, 1758, 1920, 2145, 2573
BssNI	GRCGYC	1 cut(s)	1241
BssT1I	CCWWGG	2 cut(s)	1758, 2145
Bst2UI	CCWGG	5 cut(s)	1603, 1669, 1769, 2202, 2574
Bst4CI	ACNGT	4 cut(s)	1085, 1283, 1870, 2444
Bst6I	CTCTTC	5 cut(s)	182, 1010, 1141, 1647, 2841
BstACI	GRCGYC	1 cut(s)	1241
BstAFI	CTTAAG	1 cut(s)	1340
BstBI	TTCGAA	1 cut(s)	446
BstC8I	GCNNGC	6 cut(s)	357, 996, 2342, 2700, 2704, 2847
BstDEI	CTNAG	7 cut(s)	927, 1512, 1899, 2115, 2135, 2808, 2850
BstDSI	CCRYGG	2 cut(s)	353, 975
BstF5I	GGATG	8 cut(s)	613, 737, 894, 1387, 1719, 1807, 1894, 2992
BstFNI	CGCG	3 cut(s)	355, 371, 413
BstH2I	RGCGCY	1 cut(s)	1244
BstHHI	GCGC	2 cut(s)	415, 1243
BstMAI	GTCTC	3 cut(s)	207, 1509, 2345
BstMCI	CGRYCG	3 cut(s)	9, 46, 435
BstMWI	GCNNNNNNNGC	4 cut(s)	61, 410, 1249, 2547
BstNI	CCWGG	5 cut(s)	1603, 1669, 1769, 2202, 2574
BstNSI	RCATGY	2 cut(s)	2344, 2702
BstSCI	CCNGG	6 cut(s)	267, 1601, 1667, 1767, 2200, 2572
BstSFI	CTRYAG	2 cut(s)	1539, 2560
BstSLI	GKGCMC	1 cut(s)	2797
BstUI	CGCG	3 cut(s)	355, 371, 413
BstV1I	GCAGC	7 cut(s)	1634, 1689, 1692, 1822, 1882, 2098, 2794
BstV2I	GAAGAC	1 cut(s)	2671
BstX2I	RGATCY	5 cut(s)	341, 1117, 2140, 2204, 2488
BstXI	CCANNNNNNTGG	2 cut(s)	2152, 2951
BstYI	RGATCY	5 cut(s)	341, 1117, 2140, 2204, 2488
BstZI	CGGCCG	2 cut(s)	6, 43
Bsu15I	ATCGAT	1 cut(s)	2928
Bsu36I	CCTNAGG	1 cut(s)	2808
BsuI	GTATCC	1 cut(s)	1749
BsuRI	GGCC	4 cut(s)	8, 45, 190, 2795
BsuTUI	ATCGAT	1 cut(s)	2928
BtgI	CCRYGG	2 cut(s)	353, 975
BtgZI	GCGATG	1 cut(s)	392
BtsCI	GGATG	8 cut(s)	613, 737, 894, 1387, 1719, 1807, 1894, 2992
BtsI	GCAGTG	1 cut(s)	1431
BtsIMutI	CAGTG	3 cut(s)	1090, 1212, 1431
BveI	ACCTGC	1 cut(s)	2427
Cac8I	GCNNGC	6 cut(s)	357, 996, 2342, 2700, 2704, 2847
CaiI	CAGNNNCTG	2 cut(s)	2207, 2442
CciI	TCATGA	1 cut(s)	1006
CfoI	GCGC	2 cut(s)	415, 1243
Cfr10I	RCCGGY	3 cut(s)	434, 490, 2845
Cfr13I	GGNCC	5 cut(s)	189, 2400, 2793, 2794, 2860
Cfr42I	CCGCGG	1 cut(s)	356
ClaI	ATCGAT	1 cut(s)	2928
CseI	GACGC	1 cut(s)	419
Csp6I	GTAC	3 cut(s)	438, 1883, 2440
CspAI	ACCGGT	1 cut(s)	434
CviAII	CATG	6 cut(s)	985, 1007, 1412, 2266, 2341, 2699
CviQI	GTAC	3 cut(s)	438, 1883, 2440
DdeI	CTNAG	7 cut(s)	927, 1512, 1899, 2115, 2135, 2808, 2850
DinI	GGCGCC	1 cut(s)	1242
EaeI	YGGCCR	2 cut(s)	6, 43
EagI	CGGCCG	2 cut(s)	6, 43
Eam1104I	CTCTTC	5 cut(s)	182, 1010, 1141, 1647, 2841
EarI	CTCTTC	5 cut(s)	182, 1010, 1141, 1647, 2841
EclXI	CGGCCG	2 cut(s)	6, 43
Eco130I	CCWWGG	2 cut(s)	1758, 2145
Eco24I	GRGCYC	1 cut(s)	2797
Eco31I	GGTCTC	2 cut(s)	1509, 2345
Eco47I	GGWCC	2 cut(s)	2400, 2860
Eco52I	CGGCCG	2 cut(s)	6, 43
Eco57I	CTGAAG	6 cut(s)	169, 1344, 1995, 2046, 2205, 2229
Eco81I	CCTNAGG	1 cut(s)	2808
EcoO109I	RGGNCCY	2 cut(s)	189, 2794
EcoRII	CCWGG	5 cut(s)	1601, 1667, 1767, 2200, 2572
EcoT14I	CCWWGG	2 cut(s)	1758, 2145
EcoT38I	GRGCYC	1 cut(s)	2797
EgeI	GGCGCC	1 cut(s)	1242
EheI	GGCGCC	1 cut(s)	1242
ErhI	CCWWGG	2 cut(s)	1758, 2145
Esp3I	CGTCTC	1 cut(s)	207
FaeI	CATG	6 cut(s)	988, 1010, 1415, 2269, 2344, 2702
FaqI	GGGAC	2 cut(s)	422, 1292
FatI	CATG	6 cut(s)	984, 1006, 1411, 2265, 2340, 2698
FauI	CCCGC	3 cut(s)	244, 348, 1493
FblI	GTMKAC	1 cut(s)	1983
FokI	GGATG	7 cut(s)	620, 744, 901, 1394, 1726, 1814, 1901
FriOI	GRGCYC	1 cut(s)	2797
FspBI	CTAG	6 cut(s)	302, 330, 945, 2405, 2742, 2992
GlaI	GCGC	2 cut(s)	414, 1242
GsaI	CCCAGC	2 cut(s)	55, 1291
GsuI	CTGGAG	3 cut(s)	1624, 1872, 2396
HaeII	RGCGCY	1 cut(s)	1244
HaeIII	GGCC	4 cut(s)	8, 45, 190, 2795
HapII	CCGG	8 cut(s)	21, 269, 322, 339, 428, 435, 491, 2846
HgaI	GACGC	1 cut(s)	419
HhaI	GCGC	2 cut(s)	415, 1243
Hin1I	GRCGYC	1 cut(s)	1241
Hin1II	CATG	6 cut(s)	988, 1010, 1415, 2269, 2344, 2702
Hin6I	GCGC	2 cut(s)	413, 1241
HinP1I	GCGC	2 cut(s)	413, 1241
HindIII	AAGCTT	1 cut(s)	1926
HpaII	CCGG	8 cut(s)	21, 269, 322, 339, 428, 435, 491, 2846
HphI	GGTGA	9 cut(s)	109, 554, 686, 1024, 1229, 1385, 1591, 2405, 2603
Hpy166II	GTNNAC	4 cut(s)	394, 1660, 1823, 1984
Hpy8I	GTNNAC	4 cut(s)	394, 1660, 1823, 1984
Hpy99I	CGWCG	2 cut(s)	371, 820
HpyAV	CCTTC	9 cut(s)	163, 193, 202, 268, 838, 1379, 2070, 2204, 2851
HpyCH4III	ACNGT	4 cut(s)	1085, 1283, 1870, 2444
HpyCH4IV	ACGT	1 cut(s)	440
HpyCH4V	TGCA	8 cut(s)	1075, 1424, 1470, 1541, 1810, 2159, 2340, 2782
HpyF10VI	GCNNNNNNNGC	4 cut(s)	61, 410, 1249, 2547
HpyF3I	CTNAG	7 cut(s)	927, 1512, 1899, 2115, 2135, 2808, 2850
HpySE526I	ACGT	1 cut(s)	440
Hsp92I	GRCGYC	1 cut(s)	1241
Hsp92II	CATG	6 cut(s)	988, 1010, 1415, 2269, 2344, 2702
HspAI	GCGC	2 cut(s)	413, 1241
KasI	GGCGCC	1 cut(s)	1240
KroI	GCCGGC	1 cut(s)	2845
KroNI	GCCGGC	1 cut(s)	2847
KspI	CCGCGG	1 cut(s)	356
LmnI	GCTCC	5 cut(s)	69, 237, 749, 2291, 2695
Lsp1109I	GCAGC	7 cut(s)	1634, 1689, 1692, 1822, 1882, 2098, 2794
LweI	GCATC	3 cut(s)	369, 879, 2201
MaeI	CTAG	6 cut(s)	302, 330, 945, 2405, 2742, 2992
MaeII	ACGT	1 cut(s)	440
MaeIII	GTNAC	1 cut(s)	2393
MbiI	CCGCTC	1 cut(s)	590
MfeI	CAATTG	2 cut(s)	635, 857
MflI	RGATCY	5 cut(s)	341, 1117, 2140, 2204, 2488
MhlI	GDGCHC	3 cut(s)	66, 2677, 2797
Mly113I	GGCGCC	1 cut(s)	1241
MlyI	GAGTC	6 cut(s)	266, 341, 871, 1763, 2023, 2443
MmeI	TCCRAC	5 cut(s)	60, 369, 667, 1779, 2269
MroNI	GCCGGC	1 cut(s)	2845
MroXI	GAANNNNTTC	2 cut(s)	1389, 2959
MseI	TTAA	3 cut(s)	1065, 1341, 2685
MslI	CAYNNNNRTG	3 cut(s)	2483, 2658, 2928
MspA1I	CMGCKG	3 cut(s)	55, 355, 1850
MspCI	CTTAAG	1 cut(s)	1340
MspI	CCGG	8 cut(s)	21, 269, 322, 339, 428, 435, 491, 2846
MspR9I	CCNGG	6 cut(s)	269, 1603, 1669, 1769, 2202, 2574
MunI	CAATTG	2 cut(s)	635, 857
Mva1269I	GAATGC	1 cut(s)	1534
MvaI	CCWGG	5 cut(s)	1603, 1669, 1769, 2202, 2574
MvnI	CGCG	3 cut(s)	355, 371, 413
MwoI	GCNNNNNNNGC	4 cut(s)	61, 410, 1249, 2547
NaeI	GCCGGC	1 cut(s)	2847
NarI	GGCGCC	1 cut(s)	1241
NciI	CCSGG	1 cut(s)	269
NgoMIV	GCCGGC	1 cut(s)	2845
NlaIII	CATG	6 cut(s)	988, 1010, 1415, 2269, 2344, 2702
NlaIV	GGNNCC	7 cut(s)	326, 343, 1119, 1242, 2402, 2795, 2796
NmuCI	GTSAC	1 cut(s)	2393
NspI	RCATGY	2 cut(s)	2344, 2702
NspV	TTCGAA	1 cut(s)	446
PaeI	GCATGC	2 cut(s)	2344, 2702
PagI	TCATGA	1 cut(s)	1006
PctI	GAATGC	1 cut(s)	1534
PdiI	GCCGGC	1 cut(s)	2847
PdmI	GAANNNNTTC	2 cut(s)	1389, 2959
PflMI	CCANNNNNTGG	1 cut(s)	806
PfoI	TCCNGGA	1 cut(s)	2200
PinAI	ACCGGT	1 cut(s)	434
PleI	GAGTC	6 cut(s)	266, 341, 870, 1762, 2022, 2443
PluTI	GGCGCC	1 cut(s)	1244
PpsI	GAGTC	6 cut(s)	266, 341, 870, 1762, 2022, 2443
PsiI	TTATAA	1 cut(s)	2429
Psp6I	CCWGG	5 cut(s)	1601, 1667, 1767, 2200, 2572
PspFI	CCCAGC	2 cut(s)	51, 1287
PspGI	CCWGG	5 cut(s)	1601, 1667, 1767, 2200, 2572
PspN4I	GGNNCC	7 cut(s)	326, 343, 1119, 1242, 2402, 2795, 2796
PspOMI	GGGCCC	1 cut(s)	2793
PspPI	GGNCC	5 cut(s)	189, 2400, 2793, 2794, 2860
PsrI	GAACNNNNNNTAC	2 cut(s)	1173, 1205
PstI	CTGCAG	1 cut(s)	1543
PstNI	CAGNNNCTG	2 cut(s)	2207, 2442
PsuI	RGATCY	5 cut(s)	341, 1117, 2140, 2204, 2488
PvuII	CAGCTG	1 cut(s)	1850
RsaI	GTAC	3 cut(s)	439, 1884, 2441
RsaNI	GTAC	3 cut(s)	438, 1883, 2440
RseI	CAYNNNNRTG	3 cut(s)	2483, 2658, 2928
SacII	CCGCGG	1 cut(s)	356
SaqAI	TTAA	3 cut(s)	1065, 1341, 2685
Sau96I	GGNCC	5 cut(s)	189, 2400, 2793, 2794, 2860
SchI	GAGTC	6 cut(s)	266, 341, 871, 1763, 2023, 2443
ScrFI	CCNGG	6 cut(s)	269, 1603, 1669, 1769, 2202, 2574
SduI	GDGCHC	3 cut(s)	66, 2677, 2797
SfaNI	GCATC	3 cut(s)	369, 879, 2201
SfcI	CTRYAG	2 cut(s)	1539, 2560
SfoI	GGCGCC	1 cut(s)	1242
Sfr303I	CCGCGG	1 cut(s)	356
SfuI	TTCGAA	1 cut(s)	446
SgrAI	CRCCGGYG	1 cut(s)	490
SgrBI	CCGCGG	1 cut(s)	356
SinI	GGWCC	2 cut(s)	2400, 2860
SmiMI	CAYNNNNRTG	3 cut(s)	2483, 2658, 2928
SmlI	CTYRAG	5 cut(s)	917, 1261, 1340, 2676, 2721
SmoI	CTYRAG	5 cut(s)	917, 1261, 1340, 2676, 2721
SphI	GCATGC	2 cut(s)	2344, 2702
SspDI	GGCGCC	1 cut(s)	1240
SspI	AATATT	2 cut(s)	1634, 2095
SspMI	CTAG	6 cut(s)	302, 330, 945, 2405, 2742, 2992
StyD4I	CCNGG	6 cut(s)	267, 1601, 1667, 1767, 2200, 2572
StyI	CCWWGG	2 cut(s)	1758, 2145
TaaI	ACNGT	4 cut(s)	1085, 1283, 1870, 2444
TaiI	ACGT	1 cut(s)	443
TatI	WGTACW	1 cut(s)	1882
TauI	GCSGC	6 cut(s)	8, 48, 355, 374, 377, 385
Tru1I	TTAA	3 cut(s)	1065, 1341, 2685
Tru9I	TTAA	3 cut(s)	1065, 1341, 2685
TscAI	CASTG	3 cut(s)	1090, 1212, 1431
TseFI	GTSAC	1 cut(s)	2393
TseI	GCWGC	7 cut(s)	1622, 1677, 1680, 1810, 1895, 2111, 2782
Tsp45I	GTSAC	1 cut(s)	2393
TspGWI	ACGGA	3 cut(s)	771, 964, 1763
TspRI	CASTG	3 cut(s)	1090, 1212, 1431
Van91I	CCANNNNNTGG	1 cut(s)	806
Vha464I	CTTAAG	1 cut(s)	1340
VpaK11BI	GGWCC	2 cut(s)	2400, 2860
XapI	RAATTY	8 cut(s)	16, 509, 1097, 1576, 1697, 1858, 2472, 2830
XceI	RCATGY	2 cut(s)	2344, 2702
XmiI	GTMKAC	1 cut(s)	1983
XmnI	GAANNNNTTC	2 cut(s)	1389, 2959
XspI	CTAG	6 cut(s)	302, 330, 945, 2405, 2742, 2992

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.