Polypyrimidine tract-binding protein homolog
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G43190 AT1G43190 AT1G43190 |
| fragaria_vesca | FvH4_2g13280 FvH4_2g13280 |
| malus_domestica | MD00G1066200.v1.1 MD00G1066300.v1.1 MD04G1044700.v1.1 |
| prunus_persica | Prupe.8G036700_v2.0.a1 Prupe.8G036700_v2.0.a1 Prupe.8G036700_v2.0.a1 Prupe.8G036700_v2.0.a1 Prupe.8G036700_v2.0.a1 Prupe.8G036700_v2.0.a1 |
| pyrus_communis | pycom04g03840 |
| rosa_chinensis | RchiOBHm_Chr6g0274691 |
| rosa_laevigata | RLG00000013528 |
| rosa_multiflora | Rmu_sc0006223.1_g000020 Rmu_sc0013532.1_g000012 |
| rosa_roxburghii | Rroxscaffold_7G00194060 |
| rosa_rugosa | Rorug06G0083000 |
| rosa_samantha | Rh6AG199200 Rh6BG202900 Rh6CG203100 Rh6DG194800 |
| rosa_wichuraiana | Rw6G017310 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 21 |
| Acc36I | ACCTGC | 1 cut(s) | 349 |
| Acc65I | GGTACC | 1 cut(s) | 1316 |
| AccB1I | GGYRCC | 2 cut(s) | 1154, 1316 |
| AciI | CCGC | 7 cut(s) | 761, 833, 848, 860, 864, 1192, 1222 |
| AclWI | GGATC | 4 cut(s) | 65, 111, 750, 1243 |
| AcoI | YGGCCR | 1 cut(s) | 861 |
| AcsI | RAATTY | 2 cut(s) | 192, 441 |
| AcuI | CTGAAG | 3 cut(s) | 723, 1302, 1419 |
| AfaI | GTAC | 7 cut(s) | 9, 43, 82, 808, 916, 1077, 1318 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 181, 767, 773, 1306 |
| AflIII | ACRYGT | 1 cut(s) | 56 |
| AgsI | TTSAA | 5 cut(s) | 338, 711, 803, 1198, 1379 |
| AjiI | CACGTC | 1 cut(s) | 172 |
| AjnI | CCWGG | 4 cut(s) | 766, 815, 886, 1269 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1349, 1381 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 647, 679 |
| AluBI | AGCT | 9 cut(s) | 93, 217, 247, 554, 605, 964, 1336, 1403, 1465 |
| AluI | AGCT | 9 cut(s) | 93, 217, 247, 554, 605, 964, 1336, 1403, 1465 |
| Alw21I | GWGCWC | 2 cut(s) | 95, 316 |
| Alw26I | GTCTC | 1 cut(s) | 931 |
| Alw44I | GTGCAC | 1 cut(s) | 312 |
| AlwI | GGATC | 4 cut(s) | 65, 111, 750, 1243 |
| AoxI | GGCC | 4 cut(s) | 564, 796, 861, 1392 |
| ApaLI | GTGCAC | 1 cut(s) | 312 |
| ApeKI | GCWGC | 6 cut(s) | 302, 602, 616, 763, 851, 1208 |
| ApoI | RAATTY | 2 cut(s) | 192, 441 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 43, 75 |
| Asp718I | GGTACC | 1 cut(s) | 1316 |
| AspLEI | GCGC | 2 cut(s) | 22, 616 |
| AspS9I | GGNCC | 1 cut(s) | 565 |
| AsuHPI | GGTGA | 2 cut(s) | 788, 1061 |
| AsuII | TTCGAA | 1 cut(s) | 1015 |
| BaeGI | GKGCMC | 1 cut(s) | 316 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1308, 1341 |
| BanI | GGYRCC | 2 cut(s) | 1154, 1316 |
| BanII | GRGCYC | 1 cut(s) | 95 |
| BbsI | GAAGAC | 1 cut(s) | 1251 |
| Bbv12I | GWGCWC | 2 cut(s) | 95, 316 |
| BbvI | GCAGC | 6 cut(s) | 289, 603, 614, 775, 838, 1220 |
| BccI | CCATC | 4 cut(s) | 632, 832, 1039, 1046 |
| BceAI | ACGGC | 1 cut(s) | 581 |
| BciT130I | CCWGG | 4 cut(s) | 768, 817, 888, 1271 |
| BcoDI | GTCTC | 1 cut(s) | 931 |
| BfaI | CTAG | 2 cut(s) | 606, 1304 |
| BfmI | CTRYAG | 4 cut(s) | 76, 303, 617, 1466 |
| BfuAI | ACCTGC | 1 cut(s) | 349 |
| BisI | GCNGC | 9 cut(s) | 303, 603, 617, 764, 849, 852, 861, 864, 1209 |
| BlsI | GCNGC | 9 cut(s) | 304, 604, 618, 765, 850, 853, 862, 865, 1210 |
| BmcAI | AGTACT | 1 cut(s) | 82 |
| Bme1390I | CCNGG | 4 cut(s) | 768, 817, 888, 1271 |
| BmgBI | CACGTC | 1 cut(s) | 172 |
| BmgT120I | GGNCC | 1 cut(s) | 565 |
| BmiI | GGNNCC | 3 cut(s) | 814, 1156, 1318 |
| BmrFI | CCNGG | 4 cut(s) | 768, 817, 888, 1271 |
| BmsI | GCATC | 4 cut(s) | 243, 505, 769, 1144 |
| BpiI | GAAGAC | 1 cut(s) | 1251 |
| BpmI | CTGGAG | 2 cut(s) | 197, 831 |
| Bpu14I | TTCGAA | 1 cut(s) | 1015 |
| BpuEI | CTTGAG | 2 cut(s) | 109, 399 |
| BsaJI | CCNNGG | 4 cut(s) | 767, 816, 1150, 1269 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 181, 767, 773, 1306 |
| Bse1I | ACTGG | 6 cut(s) | 370, 574, 657, 814, 1060, 1074 |
| BseBI | CCWGG | 4 cut(s) | 768, 817, 888, 1271 |
| BseDI | CCNNGG | 4 cut(s) | 767, 816, 1150, 1269 |
| BseGI | GGATG | 1 cut(s) | 1135 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 181, 767, 773, 1306 |
| BseMII | CTCAG | 2 cut(s) | 144, 1374 |
| BseNI | ACTGG | 6 cut(s) | 370, 574, 657, 814, 1060, 1074 |
| BseRI | GAGGAG | 3 cut(s) | 438, 1301, 1400 |
| BseSI | GKGCMC | 1 cut(s) | 316 |
| BseX3I | CGGCCG | 1 cut(s) | 861 |
| BseXI | GCAGC | 6 cut(s) | 289, 603, 614, 775, 838, 1220 |
| Bsh1285I | CGRYCG | 1 cut(s) | 864 |
| BshFI | GGCC | 4 cut(s) | 566, 798, 863, 1394 |
| BshNI | GGYRCC | 2 cut(s) | 1154, 1316 |
| BsiEI | CGRYCG | 1 cut(s) | 864 |
| BsiHKAI | GWGCWC | 2 cut(s) | 95, 316 |
| BslFI | GGGAC | 2 cut(s) | 636, 913 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 181, 767, 773, 1306 |
| BsmAI | GTCTC | 1 cut(s) | 931 |
| BsmFI | GGGAC | 2 cut(s) | 636, 913 |
| BsmI | GAATGC | 1 cut(s) | 415 |
| BsnI | GGCC | 4 cut(s) | 566, 798, 863, 1394 |
| Bsp119I | TTCGAA | 1 cut(s) | 1015 |
| Bsp1286I | GDGCHC | 2 cut(s) | 95, 316 |
| Bsp1407I | TGTACA | 2 cut(s) | 41, 914 |
| Bsp143I | GATC | 5 cut(s) | 70, 116, 531, 755, 1248 |
| BspACI | CCGC | 7 cut(s) | 761, 833, 848, 860, 864, 1192, 1222 |
| BspANI | GGCC | 4 cut(s) | 566, 798, 863, 1394 |
| BspCNI | CTCAG | 2 cut(s) | 143, 1375 |
| BspLI | GGNNCC | 3 cut(s) | 814, 1156, 1318 |
| BspMAI | CTGCAG | 3 cut(s) | 80, 307, 621 |
| BspMI | ACCTGC | 1 cut(s) | 349 |
| BspPI | GGATC | 4 cut(s) | 65, 111, 750, 1243 |
| BspT104I | TTCGAA | 1 cut(s) | 1015 |
| BspT107I | GGYRCC | 2 cut(s) | 1154, 1316 |
| BsrGI | TGTACA | 2 cut(s) | 41, 914 |
| BsrI | ACTGG | 6 cut(s) | 370, 574, 657, 814, 1060, 1074 |
| BssECI | CCNNGG | 4 cut(s) | 767, 816, 1150, 1269 |
| BssMI | GATC | 5 cut(s) | 70, 116, 531, 755, 1248 |
| BssT1I | CCWWGG | 1 cut(s) | 1150 |
| Bst2UI | CCWGG | 4 cut(s) | 768, 817, 888, 1271 |
| Bst4CI | ACNGT | 2 cut(s) | 484, 919 |
| Bst6I | CTCTTC | 2 cut(s) | 1269, 1278 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 311 |
| BstAUI | TGTACA | 2 cut(s) | 41, 914 |
| BstBI | TTCGAA | 1 cut(s) | 1015 |
| BstC8I | GCNNGC | 4 cut(s) | 1362, 1392, 1415, 1419 |
| BstDEI | CTNAG | 4 cut(s) | 130, 243, 448, 1383 |
| BstF5I | GGATG | 1 cut(s) | 1135 |
| BstHHI | GCGC | 2 cut(s) | 22, 616 |
| BstKTI | GATC | 5 cut(s) | 73, 119, 534, 758, 1251 |
| BstMAI | GTCTC | 1 cut(s) | 931 |
| BstMBI | GATC | 5 cut(s) | 70, 116, 531, 755, 1248 |
| BstMCI | CGRYCG | 1 cut(s) | 864 |
| BstNI | CCWGG | 4 cut(s) | 768, 817, 888, 1271 |
| BstNSI | RCATGY | 3 cut(s) | 60, 469, 1421 |
| BstSCI | CCNGG | 4 cut(s) | 766, 815, 886, 1269 |
| BstSFI | CTRYAG | 4 cut(s) | 76, 303, 617, 1466 |
| BstSLI | GKGCMC | 1 cut(s) | 316 |
| BstV1I | GCAGC | 6 cut(s) | 289, 603, 614, 775, 838, 1220 |
| BstV2I | GAAGAC | 1 cut(s) | 1251 |
| BstX2I | RGATCY | 1 cut(s) | 755 |
| BstYI | RGATCY | 1 cut(s) | 755 |
| BstZI | CGGCCG | 1 cut(s) | 861 |
| BsuRI | GGCC | 4 cut(s) | 566, 798, 863, 1394 |
| BtgZI | GCGATG | 1 cut(s) | 30 |
| BtrI | CACGTC | 1 cut(s) | 172 |
| BtsCI | GGATG | 1 cut(s) | 1135 |
| BtsI | GCAGTG | 1 cut(s) | 314 |
| BtsIMutI | CAGTG | 4 cut(s) | 314, 489, 1278, 1395 |
| BveI | ACCTGC | 1 cut(s) | 349 |
| Cac8I | GCNNGC | 4 cut(s) | 1362, 1392, 1415, 1419 |
| CciNI | GCGGCCGC | 1 cut(s) | 861 |
| CfoI | GCGC | 2 cut(s) | 22, 616 |
| Cfr13I | GGNCC | 1 cut(s) | 565 |
| CseI | GACGC | 1 cut(s) | 633 |
| Csp6I | GTAC | 7 cut(s) | 8, 42, 81, 807, 915, 1076, 1317 |
| CviAII | CATG | 8 cut(s) | 57, 188, 466, 515, 1031, 1166, 1174, 1418 |
| CviQI | GTAC | 7 cut(s) | 8, 42, 81, 807, 915, 1076, 1317 |
| DdeI | CTNAG | 4 cut(s) | 130, 243, 448, 1383 |
| DpnI | GATC | 5 cut(s) | 72, 118, 533, 757, 1250 |
| DpnII | GATC | 5 cut(s) | 70, 116, 531, 755, 1248 |
| EaeI | YGGCCR | 1 cut(s) | 861 |
| EagI | CGGCCG | 1 cut(s) | 861 |
| Eam1104I | CTCTTC | 2 cut(s) | 1269, 1278 |
| EarI | CTCTTC | 2 cut(s) | 1269, 1278 |
| Ecl136II | GAGCTC | 1 cut(s) | 93 |
| EclXI | CGGCCG | 1 cut(s) | 861 |
| Eco130I | CCWWGG | 1 cut(s) | 1150 |
| Eco24I | GRGCYC | 1 cut(s) | 95 |
| Eco52I | CGGCCG | 1 cut(s) | 861 |
| Eco53kI | GAGCTC | 1 cut(s) | 93 |
| Eco57I | CTGAAG | 3 cut(s) | 723, 1302, 1419 |
| EcoICRI | GAGCTC | 1 cut(s) | 93 |
| EcoO109I | RGGNCCY | 1 cut(s) | 565 |
| EcoRI | GAATTC | 1 cut(s) | 441 |
| EcoRII | CCWGG | 4 cut(s) | 766, 815, 886, 1269 |
| EcoT14I | CCWWGG | 1 cut(s) | 1150 |
| EcoT38I | GRGCYC | 1 cut(s) | 95 |
| ErhI | CCWWGG | 1 cut(s) | 1150 |
| FaeI | CATG | 8 cut(s) | 60, 191, 469, 518, 1034, 1169, 1177, 1421 |
| FaqI | GGGAC | 2 cut(s) | 636, 913 |
| FatI | CATG | 8 cut(s) | 56, 187, 465, 514, 1030, 1165, 1173, 1417 |
| FauI | CCCGC | 1 cut(s) | 768 |
| Fnu4HI | GCNGC | 9 cut(s) | 303, 603, 617, 764, 849, 852, 861, 864, 1209 |
| FokI | GGATG | 1 cut(s) | 1122 |
| FriOI | GRGCYC | 1 cut(s) | 95 |
| Fsp4HI | GCNGC | 9 cut(s) | 303, 603, 617, 764, 849, 852, 861, 864, 1209 |
| FspAI | RTGCGCAY | 1 cut(s) | 21 |
| FspBI | CTAG | 2 cut(s) | 606, 1304 |
| FspI | TGCGCA | 1 cut(s) | 21 |
| GlaI | GCGC | 2 cut(s) | 21, 615 |
| GluI | GCNGC | 9 cut(s) | 303, 603, 617, 764, 849, 852, 861, 864, 1209 |
| GsuI | CTGGAG | 2 cut(s) | 197, 831 |
| HaeIII | GGCC | 4 cut(s) | 566, 798, 863, 1394 |
| HgaI | GACGC | 1 cut(s) | 633 |
| HhaI | GCGC | 2 cut(s) | 22, 616 |
| Hin1II | CATG | 8 cut(s) | 60, 191, 469, 518, 1034, 1169, 1177, 1421 |
| Hin6I | GCGC | 2 cut(s) | 20, 614 |
| HinP1I | GCGC | 2 cut(s) | 20, 614 |
| HincII | GTYRAC | 2 cut(s) | 650, 1123 |
| HindII | GTYRAC | 2 cut(s) | 650, 1123 |
| HindIII | AAGCTT | 2 cut(s) | 245, 962 |
| HinfI | GANTC | 3 cut(s) | 28, 234, 1449 |
| HphI | GGTGA | 2 cut(s) | 788, 1061 |
| Hpy166II | GTNNAC | 9 cut(s) | 314, 650, 691, 881, 915, 1078, 1123, 1297, 1327 |
| Hpy188I | TCNGA | 8 cut(s) | 176, 199, 408, 546, 742, 1066, 1140, 1448 |
| Hpy188III | TCNNGA | 4 cut(s) | 386, 711, 941, 1042 |
| Hpy8I | GTNNAC | 9 cut(s) | 314, 650, 691, 881, 915, 1078, 1123, 1297, 1327 |
| HpyAV | CCTTC | 5 cut(s) | 111, 119, 348, 747, 809 |
| HpyCH4III | ACNGT | 2 cut(s) | 484, 919 |
| HpyCH4IV | ACGT | 1 cut(s) | 171 |
| HpyF3I | CTNAG | 4 cut(s) | 130, 243, 448, 1383 |
| HpySE526I | ACGT | 1 cut(s) | 171 |
| Hsp92II | CATG | 8 cut(s) | 60, 191, 469, 518, 1034, 1169, 1177, 1421 |
| HspAI | GCGC | 2 cut(s) | 20, 614 |
| KpnI | GGTACC | 1 cut(s) | 1320 |
| Kzo9I | GATC | 5 cut(s) | 70, 116, 531, 755, 1248 |
| LmnI | GCTCC | 3 cut(s) | 216, 812, 1387 |
| Lsp1109I | GCAGC | 6 cut(s) | 289, 603, 614, 775, 838, 1220 |
| LweI | GCATC | 4 cut(s) | 243, 505, 769, 1144 |
| MaeI | CTAG | 2 cut(s) | 606, 1304 |
| MaeII | ACGT | 1 cut(s) | 171 |
| MaeIII | GTNAC | 5 cut(s) | 451, 535, 582, 681, 1276 |
| MalI | GATC | 5 cut(s) | 72, 118, 533, 757, 1250 |
| MboI | GATC | 5 cut(s) | 70, 116, 531, 755, 1248 |
| MboII | GAAGA | 7 cut(s) | 104, 541, 765, 1004, 1251, 1256, 1295 |
| MfeI | CAATTG | 1 cut(s) | 855 |
| MflI | RGATCY | 1 cut(s) | 755 |
| MhlI | GDGCHC | 2 cut(s) | 95, 316 |
| MlyI | GAGTC | 1 cut(s) | 243 |
| MmeI | TCCRAC | 1 cut(s) | 805 |
| MseI | TTAA | 2 cut(s) | 969, 1005 |
| MspA1I | CMGCKG | 1 cut(s) | 554 |
| MspR9I | CCNGG | 4 cut(s) | 768, 817, 888, 1271 |
| MunI | CAATTG | 1 cut(s) | 855 |
| Mva1269I | GAATGC | 1 cut(s) | 415 |
| MvaI | CCWGG | 4 cut(s) | 768, 817, 888, 1271 |
| NdeII | GATC | 5 cut(s) | 70, 116, 531, 755, 1248 |
| NlaIII | CATG | 8 cut(s) | 60, 191, 469, 518, 1034, 1169, 1177, 1421 |
| NlaIV | GGNNCC | 3 cut(s) | 814, 1156, 1318 |
| NmuCI | GTSAC | 3 cut(s) | 535, 582, 1276 |
| NotI | GCGGCCGC | 1 cut(s) | 861 |
| NsbI | TGCGCA | 1 cut(s) | 21 |
| NspI | RCATGY | 3 cut(s) | 60, 469, 1421 |
| NspV | TTCGAA | 1 cut(s) | 1015 |
| PaeI | GCATGC | 1 cut(s) | 1421 |
| PciI | ACATGT | 1 cut(s) | 56 |
| PctI | GAATGC | 1 cut(s) | 415 |
| PfeI | GAWTC | 2 cut(s) | 28, 1449 |
| PkrI | GCNGC | 9 cut(s) | 304, 604, 618, 765, 850, 853, 862, 865, 1210 |
| PleI | GAGTC | 1 cut(s) | 242 |
| PpsI | GAGTC | 1 cut(s) | 242 |
| PscI | ACATGT | 1 cut(s) | 56 |
| Psp124BI | GAGCTC | 1 cut(s) | 95 |
| Psp6I | CCWGG | 4 cut(s) | 766, 815, 886, 1269 |
| PspGI | CCWGG | 4 cut(s) | 766, 815, 886, 1269 |
| PspN4I | GGNNCC | 3 cut(s) | 814, 1156, 1318 |
| PspPI | GGNCC | 1 cut(s) | 565 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 1059, 1091 |
| PstI | CTGCAG | 3 cut(s) | 80, 307, 621 |
| PsuI | RGATCY | 1 cut(s) | 755 |
| PvuII | CAGCTG | 1 cut(s) | 554 |
| RsaI | GTAC | 7 cut(s) | 9, 43, 82, 808, 916, 1077, 1318 |
| RsaNI | GTAC | 7 cut(s) | 8, 42, 81, 807, 915, 1076, 1317 |
| SacI | GAGCTC | 1 cut(s) | 95 |
| SaqAI | TTAA | 2 cut(s) | 969, 1005 |
| SatI | GCNGC | 9 cut(s) | 303, 603, 617, 764, 849, 852, 861, 864, 1209 |
| Sau3AI | GATC | 5 cut(s) | 70, 116, 531, 755, 1248 |
| Sau96I | GGNCC | 1 cut(s) | 565 |
| ScaI | AGTACT | 1 cut(s) | 82 |
| SchI | GAGTC | 1 cut(s) | 243 |
| ScrFI | CCNGG | 4 cut(s) | 768, 817, 888, 1271 |
| SduI | GDGCHC | 2 cut(s) | 95, 316 |
| SfaNI | GCATC | 4 cut(s) | 243, 505, 769, 1144 |
| SfcI | CTRYAG | 4 cut(s) | 76, 303, 617, 1466 |
| SfuI | TTCGAA | 1 cut(s) | 1015 |
| SmlI | CTYRAG | 2 cut(s) | 88, 414 |
| SmoI | CTYRAG | 2 cut(s) | 88, 414 |
| SphI | GCATGC | 1 cut(s) | 1421 |
| SsiI | CCGC | 7 cut(s) | 761, 833, 848, 860, 864, 1192, 1222 |
| SspI | AATATT | 1 cut(s) | 631 |
| SspMI | CTAG | 2 cut(s) | 606, 1304 |
| SstI | GAGCTC | 1 cut(s) | 95 |
| StyD4I | CCNGG | 4 cut(s) | 766, 815, 886, 1269 |
| StyI | CCWWGG | 1 cut(s) | 1150 |
| TaaI | ACNGT | 2 cut(s) | 484, 919 |
| TaiI | ACGT | 1 cut(s) | 174 |
| TaqI | TCGA | 3 cut(s) | 69, 115, 1015 |
| TatI | WGTACW | 4 cut(s) | 41, 80, 914, 1075 |
| TauI | GCSGC | 3 cut(s) | 851, 863, 866 |
| TfiI | GAWTC | 2 cut(s) | 28, 1449 |
| Tru1I | TTAA | 2 cut(s) | 969, 1005 |
| Tru9I | TTAA | 2 cut(s) | 969, 1005 |
| TscAI | CASTG | 4 cut(s) | 321, 489, 1285, 1402 |
| TseFI | GTSAC | 3 cut(s) | 535, 582, 1276 |
| TseI | GCWGC | 6 cut(s) | 302, 602, 616, 763, 851, 1208 |
| Tsp45I | GTSAC | 3 cut(s) | 535, 582, 1276 |
| TspDTI | ATGAA | 5 cut(s) | 204, 449, 1182, 1190, 1361 |
| TspGWI | ACGGA | 1 cut(s) | 1365 |
| TspRI | CASTG | 4 cut(s) | 321, 489, 1285, 1402 |
| VneI | GTGCAC | 1 cut(s) | 312 |
| XapI | RAATTY | 2 cut(s) | 192, 441 |
| XceI | RCATGY | 3 cut(s) | 60, 469, 1421 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1049 |
| XspI | CTAG | 2 cut(s) | 606, 1304 |
| ZrmI | AGTACT | 1 cut(s) | 82 |