Prupe.8G036900_v2.0.a1

5-formyltetrahydrofolate cyclo-ligase-like protein COG0212

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp08
Physical Location & Seq
Forward (+)
3386378 .. 3389732
3355 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.8G036900.1

Sequence Viewer

Length: 1101 bp
ATGCCGTTAATGGATTCAAGCCTGCTCCGAAACTCAACCCCATTTACACTTGGACCCCTACCCAACCTCCTGAATAAAACCCAGAAATGCCGCCATTCTCTCTCTTCACTCTCCCTCCCAACAAATTCTCACAAACACCTCTTCATGCGGAGAAGTGGCAGTAGCAGCGGACCCCGAAACGACGTCACTTTCGACGAGGCGGCTTACGAAGCCGAGCGGCTCAGCTTTGACGCCAAGGCTCGAGAAGAAATGGCTGAGACTTCGAAGATTGAGACCCAAGAAAGTGGGGTTGCCGAAGACCCGAAAGCTTGGAAATGGGTGATCCGGAAGAGAATTTGGGACATGATGGAGGCCCGGAACATAGCCCAGAATCCGCGCCCCGTTCACCATCGCATACCAAACTTCGTTGGCGCTGCAGCTGCTGCGGATAAATTGGGTGGGTTGGAAGTGTTTCGGGTCGGGACTTGCGTGAAGGTTAATCCAGATTCACCTCAGAAGCAAGTCAGGTTTCTCACACTGTCTGGTGAGAAGAAGTTGTTAACTCCGCAACCCCGTTTAAGGACTGGGTTTTTCTCCGTTCTTGAATCCCATATGTTGACTCCTAGTACAATCAAAGAGGCTTGCACCTCTGTTGGGGTCGCCAAGTATGGGCGGGCAATTGGATTAGACGAGAAAATCAAGGTTGATCTTATAGTCATCGGCTCAGTTGCTGTTGATCCAAGGACAGGCGCTCGACTTGGCAAGGGTGAGGGATTTGCAGAACTTGAATATGGGATGCTGCGATTCATGGGAGCCATTGATGACTCAACACCAGTTGTCACTACGGTGCATGACAGTCAATTGGTAGATGATATTCCGATTGAGAAGCTGTTAGTCCATGATGTACCAGTGGACATCATATGCACTCCAACCCAGGTCATATTTACCAACACATCAATTCCAAAGCCTCAAGGGATTTACTGGGACAAATTGTCCCCTGAGAAGCTCGGGCAAATTAGAATACTTAGAGAGCTCAAGAGAAGGATTGAGAAGGAGGCTGGACAAAAGCTTCCATGCGGTCCATCTGAGAAACTGCCTCCAACAGCAAGACGAGGGAGATAA

Protein Analysis

367

Amino Acids

40.61

Weight (kDa)

9.35

Isoelectric Point (pI)

38.72

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 186
AccBSI CCGCTC 1 cut(s) 217
AccII CGCG 1 cut(s) 376
AccIII TCCGGA 1 cut(s) 324
AclWI GGATC 2 cut(s) 316, 710
AcsI RAATTY 2 cut(s) 124, 333
AcyI GRCGYC 2 cut(s) 183, 231
AfaI GTAC 2 cut(s) 607, 885
AfiI CCNNNNNNNGG 4 cut(s) 558, 633, 648, 725
AgsI TTSAA 3 cut(s) 18, 584, 767
AhdI GACNNNNNGTC 1 cut(s) 970
AjnI CCWGG 1 cut(s) 912
AleI CACNNNNGTG 1 cut(s) 824
AluBI AGCT 7 cut(s) 225, 308, 419, 868, 985, 1012, 1048
AluI AGCT 7 cut(s) 225, 308, 419, 868, 985, 1012, 1048
Alw21I GWGCWC 1 cut(s) 1014
Alw26I GTCTC 2 cut(s) 251, 266
AlwI GGATC 2 cut(s) 316, 710
AlwNI CAGNNNCTG 2 cut(s) 422, 710
Ama87I CYCGRG 2 cut(s) 240, 986
Aor13HI TCCGGA 1 cut(s) 324
AoxI GGCC 1 cut(s) 351
ApeKI GCWGC 6 cut(s) 165, 413, 416, 419, 422, 778
ApoI RAATTY 2 cut(s) 124, 333
ArsI GACNNNNNNTTYG 2 cut(s) 173, 205
Asp700I GAANNNNTTC 1 cut(s) 450
AspLEI GCGC 3 cut(s) 378, 413, 731
AspS9I GGNCC 4 cut(s) 53, 170, 352, 1058
AsuC2I CCSGG 1 cut(s) 355
AsuHPI GGTGA 5 cut(s) 331, 377, 480, 536, 758
AsuII TTCGAA 1 cut(s) 263
AvaI CYCGRG 2 cut(s) 240, 986
AvaII GGWCC 3 cut(s) 53, 170, 1058
BanII GRGCYC 1 cut(s) 1014
BbsI GAAGAC 1 cut(s) 303
Bbv12I GWGCWC 1 cut(s) 1014
BbvI GCAGC 6 cut(s) 177, 400, 406, 409, 428, 765
BccI CCATC 3 cut(s) 340, 396, 1069
BciT130I CCWGG 1 cut(s) 914
BcnI CCSGG 1 cut(s) 355
BcoDI GTCTC 2 cut(s) 251, 266
BfaI CTAG 1 cut(s) 603
BfmI CTRYAG 1 cut(s) 414
BfoI RGCGCY 2 cut(s) 414, 732
BisI GCNGC 9 cut(s) 91, 166, 201, 218, 414, 417, 420, 423, 779
BlpI GCTNAGC 1 cut(s) 221
BlsI GCNGC 9 cut(s) 92, 167, 202, 219, 415, 418, 421, 424, 780
Bme1390I CCNGG 2 cut(s) 355, 914
Bme18I GGWCC 3 cut(s) 53, 170, 1058
BmeRI GACNNNNNGTC 1 cut(s) 970
BmeT110I CYCGRG 2 cut(s) 240, 986
BmgT120I GGNCC 4 cut(s) 53, 170, 352, 1058
BmiI GGNNCC 3 cut(s) 55, 172, 793
BmrFI CCNGG 2 cut(s) 355, 914
BmrI ACTGGG 2 cut(s) 573, 970
BmsI GCATC 1 cut(s) 765
BmuI ACTGGG 2 cut(s) 573, 970
BpiI GAAGAC 1 cut(s) 303
Bpu1102I GCTNAGC 1 cut(s) 221
Bpu14I TTCGAA 1 cut(s) 263
BpuEI CTTGAG 2 cut(s) 933, 998
BpuMI CCSGG 1 cut(s) 355
BsaHI GRCGYC 2 cut(s) 183, 231
BsaI GGTCTC 1 cut(s) 266
BsaJI CCNNGG 3 cut(s) 234, 719, 912
BsaWI WCCGGW 1 cut(s) 324
BsaXI ACNNNNNCTCC 4 cut(s) 51, 81, 99, 129
Bsc4I CCNNNNNNNGG 4 cut(s) 558, 633, 648, 725
Bse1I ACTGG 4 cut(s) 568, 812, 887, 965
BseAI TCCGGA 1 cut(s) 324
BseBI CCWGG 1 cut(s) 914
BseDI CCNNGG 3 cut(s) 234, 719, 912
BseGI GGATG 1 cut(s) 780
BseLI CCNNNNNNNGG 4 cut(s) 558, 633, 648, 725
BseMII CTCAG 6 cut(s) 235, 246, 506, 717, 969, 1056
BseNI ACTGG 4 cut(s) 568, 812, 887, 965
BseXI GCAGC 6 cut(s) 177, 400, 406, 409, 428, 765
Bsh1236I CGCG 1 cut(s) 376
BshFI GGCC 1 cut(s) 353
BsiHKAI GWGCWC 1 cut(s) 1014
BsiHKCI CYCGRG 2 cut(s) 240, 986
BsiSI CCGG 2 cut(s) 325, 355
BslFI GGGAC 4 cut(s) 353, 475, 958, 977
BslI CCNNNNNNNGG 4 cut(s) 558, 633, 648, 725
BsmAI GTCTC 2 cut(s) 251, 266
BsmFI GGGAC 4 cut(s) 353, 475, 958, 977
BsnI GGCC 1 cut(s) 353
Bso31I GGTCTC 1 cut(s) 266
BsoBI CYCGRG 2 cut(s) 240, 986
Bsp119I TTCGAA 1 cut(s) 263
Bsp1286I GDGCHC 1 cut(s) 1014
Bsp13I TCCGGA 1 cut(s) 324
Bsp143I GATC 3 cut(s) 321, 685, 715
Bsp1720I GCTNAGC 1 cut(s) 221
BspANI GGCC 1 cut(s) 353
BspCNI CTCAG 6 cut(s) 234, 247, 505, 716, 970, 1057
BspEI TCCGGA 1 cut(s) 324
BspFNI CGCG 1 cut(s) 376
BspLI GGNNCC 3 cut(s) 55, 172, 793
BspMAI CTGCAG 1 cut(s) 418
BspPI GGATC 2 cut(s) 316, 710
BspT104I TTCGAA 1 cut(s) 263
BspTNI GGTCTC 1 cut(s) 266
BsrBI CCGCTC 1 cut(s) 217
BsrI ACTGG 4 cut(s) 568, 812, 887, 965
BssECI CCNNGG 3 cut(s) 234, 719, 912
BssMI GATC 3 cut(s) 321, 685, 715
BssNI GRCGYC 2 cut(s) 183, 231
BssT1I CCWWGG 2 cut(s) 234, 719
Bst2UI CCWGG 1 cut(s) 914
Bst4CI ACNGT 3 cut(s) 519, 826, 836
Bst6I CTCTTC 3 cut(s) 109, 146, 323
BstACI GRCGYC 2 cut(s) 183, 231
BstAPI GCANNNNNTGC 1 cut(s) 422
BstBI TTCGAA 1 cut(s) 263
BstC8I GCNNGC 3 cut(s) 23, 622, 654
BstDEI CTNAG 7 cut(s) 221, 255, 492, 703, 978, 1004, 1065
BstF5I GGATG 1 cut(s) 780
BstFNI CGCG 1 cut(s) 376
BstH2I RGCGCY 2 cut(s) 414, 732
BstHHI GCGC 3 cut(s) 378, 413, 731
BstKTI GATC 3 cut(s) 324, 688, 718
BstMAI GTCTC 2 cut(s) 251, 266
BstMBI GATC 3 cut(s) 321, 685, 715
BstMWI GCNNNNNNNGC 4 cut(s) 165, 209, 419, 422
BstNI CCWGG 1 cut(s) 914
BstSCI CCNGG 2 cut(s) 353, 912
BstSFI CTRYAG 1 cut(s) 414
BstUI CGCG 1 cut(s) 376
BstV1I GCAGC 6 cut(s) 177, 400, 406, 409, 428, 765
BstV2I GAAGAC 1 cut(s) 303
BstXI CCANNNNNNTGG 1 cut(s) 284
BsuRI GGCC 1 cut(s) 353
BtgZI GCGATG 1 cut(s) 374
BtsCI GGATG 1 cut(s) 780
BtsIMutI CAGTG 2 cut(s) 515, 894
Cac8I GCNNGC 3 cut(s) 23, 622, 654
CaiI CAGNNNCTG 2 cut(s) 422, 710
CfoI GCGC 3 cut(s) 378, 413, 731
Cfr13I GGNCC 4 cut(s) 53, 170, 352, 1058
CseI GACGC 1 cut(s) 239
Csp6I GTAC 2 cut(s) 606, 884
CviAII CATG 6 cut(s) 145, 343, 787, 830, 878, 1053
CviQI GTAC 2 cut(s) 606, 884
DdeI CTNAG 7 cut(s) 221, 255, 492, 703, 978, 1004, 1065
DpnI GATC 3 cut(s) 323, 687, 717
DpnII GATC 3 cut(s) 321, 685, 715
DriI GACNNNNNGTC 1 cut(s) 970
Eam1104I CTCTTC 3 cut(s) 109, 146, 323
Eam1105I GACNNNNNGTC 1 cut(s) 970
EarI CTCTTC 3 cut(s) 109, 146, 323
Ecl136II GAGCTC 1 cut(s) 1012
Eco130I CCWWGG 2 cut(s) 234, 719
Eco24I GRGCYC 1 cut(s) 1014
Eco31I GGTCTC 1 cut(s) 266
Eco47I GGWCC 3 cut(s) 53, 170, 1058
Eco53kI GAGCTC 1 cut(s) 1012
Eco88I CYCGRG 2 cut(s) 240, 986
EcoICRI GAGCTC 1 cut(s) 1012
EcoRII CCWGG 1 cut(s) 912
EcoT14I CCWWGG 2 cut(s) 234, 719
EcoT38I GRGCYC 1 cut(s) 1014
ErhI CCWWGG 2 cut(s) 234, 719
FaeI CATG 6 cut(s) 148, 346, 790, 833, 881, 1056
FaqI GGGAC 4 cut(s) 353, 475, 958, 977
FatI CATG 6 cut(s) 144, 342, 786, 829, 877, 1052
FauI CCCGC 1 cut(s) 645
FauNDI CATATG 2 cut(s) 591, 899
Fnu4HI GCNGC 9 cut(s) 91, 166, 201, 218, 414, 417, 420, 423, 779
FokI GGATG 1 cut(s) 787
FriOI GRGCYC 1 cut(s) 1014
Fsp4HI GCNGC 9 cut(s) 91, 166, 201, 218, 414, 417, 420, 423, 779
FspBI CTAG 1 cut(s) 603
GlaI GCGC 3 cut(s) 377, 412, 730
GluI GCNGC 9 cut(s) 91, 166, 201, 218, 414, 417, 420, 423, 779
HaeII RGCGCY 2 cut(s) 414, 732
HaeIII GGCC 1 cut(s) 353
HapII CCGG 2 cut(s) 325, 355
HgaI GACGC 1 cut(s) 239
HhaI GCGC 3 cut(s) 378, 413, 731
Hin1I GRCGYC 2 cut(s) 183, 231
Hin1II CATG 6 cut(s) 148, 346, 790, 833, 881, 1056
Hin6I GCGC 3 cut(s) 376, 411, 729
HinP1I GCGC 3 cut(s) 376, 411, 729
HincII GTYRAC 2 cut(s) 540, 597
HindII GTYRAC 2 cut(s) 540, 597
HindIII AAGCTT 2 cut(s) 306, 1046
HinfI GANTC 7 cut(s) 14, 370, 485, 584, 598, 783, 803
HpaI GTTAAC 1 cut(s) 540
HpaII CCGG 2 cut(s) 325, 355
HphI GGTGA 5 cut(s) 331, 377, 480, 536, 758
Hpy166II GTNNAC 4 cut(s) 385, 540, 597, 892
Hpy188I TCNGA 4 cut(s) 29, 495, 858, 1066
Hpy188III TCNNGA 7 cut(s) 70, 242, 325, 460, 482, 581, 1015
Hpy8I GTNNAC 4 cut(s) 385, 540, 597, 892
Hpy99I CGWCG 2 cut(s) 185, 197
HpyAV CCTTC 3 cut(s) 466, 1014, 1024
HpyCH4III ACNGT 3 cut(s) 519, 826, 836
HpyCH4IV ACGT 1 cut(s) 183
HpyCH4V TGCA 5 cut(s) 416, 624, 758, 829, 903
HpyF10VI GCNNNNNNNGC 4 cut(s) 165, 209, 419, 422
HpyF3I CTNAG 7 cut(s) 221, 255, 492, 703, 978, 1004, 1065
HpySE526I ACGT 1 cut(s) 183
Hsp92I GRCGYC 2 cut(s) 183, 231
Hsp92II CATG 6 cut(s) 148, 346, 790, 833, 881, 1056
HspAI GCGC 3 cut(s) 376, 411, 729
Kpn2I TCCGGA 1 cut(s) 324
KspAI GTTAAC 1 cut(s) 540
Kzo9I GATC 3 cut(s) 321, 685, 715
LmnI GCTCC 2 cut(s) 30, 791
Lsp1109I GCAGC 6 cut(s) 177, 400, 406, 409, 428, 765
LweI GCATC 1 cut(s) 765
MaeI CTAG 1 cut(s) 603
MaeII ACGT 1 cut(s) 183
MaeIII GTNAC 2 cut(s) 184, 817
MalI GATC 3 cut(s) 323, 687, 717
MbiI CCGCTC 1 cut(s) 217
MboI GATC 3 cut(s) 321, 685, 715
MboII GAAGA 7 cut(s) 96, 133, 257, 277, 308, 340, 541
MfeI CAATTG 2 cut(s) 657, 839
MhlI GDGCHC 1 cut(s) 1014
MluCI AATT 8 cut(s) 124, 333, 431, 657, 839, 936, 968, 993
MlyI GAGTC 2 cut(s) 592, 797
MmeI TCCRAC 2 cut(s) 423, 932
MroI TCCGGA 1 cut(s) 324
MroXI GAANNNNTTC 1 cut(s) 450
MseI TTAA 4 cut(s) 8, 477, 539, 557
MslI CAYNNNNRTG 1 cut(s) 824
MspA1I CMGCKG 2 cut(s) 168, 419
MspI CCGG 2 cut(s) 325, 355
MspR9I CCNGG 2 cut(s) 355, 914
MunI CAATTG 2 cut(s) 657, 839
MvaI CCWGG 1 cut(s) 914
MvnI CGCG 1 cut(s) 376
MwoI GCNNNNNNNGC 4 cut(s) 165, 209, 419, 422
NciI CCSGG 1 cut(s) 355
NdeI CATATG 2 cut(s) 591, 899
NdeII GATC 3 cut(s) 321, 685, 715
NlaIII CATG 6 cut(s) 148, 346, 790, 833, 881, 1056
NlaIV GGNNCC 3 cut(s) 55, 172, 793
NmeAIII GCCGAG 1 cut(s) 238
NmuCI GTSAC 2 cut(s) 184, 817
NspV TTCGAA 1 cut(s) 263
OliI CACNNNNGTG 1 cut(s) 824
PaeR7I CTCGAG 1 cut(s) 240
PcsI WCGNNNNNNNCGW 2 cut(s) 189, 465
PdmI GAANNNNTTC 1 cut(s) 450
PfeI GAWTC 5 cut(s) 14, 370, 485, 584, 783
PkrI GCNGC 9 cut(s) 92, 167, 202, 219, 415, 418, 421, 424, 780
PleI GAGTC 2 cut(s) 592, 797
PpsI GAGTC 2 cut(s) 592, 797
Psp124BI GAGCTC 1 cut(s) 1014
Psp6I CCWGG 1 cut(s) 912
PspGI CCWGG 1 cut(s) 912
PspN4I GGNNCC 3 cut(s) 55, 172, 793
PspPI GGNCC 4 cut(s) 53, 170, 352, 1058
PstI CTGCAG 1 cut(s) 418
PstNI CAGNNNCTG 2 cut(s) 422, 710
PvuII CAGCTG 1 cut(s) 419
RsaI GTAC 2 cut(s) 607, 885
RsaNI GTAC 2 cut(s) 606, 884
RseI CAYNNNNRTG 1 cut(s) 824
SacI GAGCTC 1 cut(s) 1014
SaqAI TTAA 4 cut(s) 8, 477, 539, 557
SatI GCNGC 9 cut(s) 91, 166, 201, 218, 414, 417, 420, 423, 779
Sau3AI GATC 3 cut(s) 321, 685, 715
Sau96I GGNCC 4 cut(s) 53, 170, 352, 1058
SchI GAGTC 2 cut(s) 592, 797
ScrFI CCNGG 2 cut(s) 355, 914
SduI GDGCHC 1 cut(s) 1014
SfaNI GCATC 1 cut(s) 765
SfcI CTRYAG 1 cut(s) 414
Sfr274I CTCGAG 1 cut(s) 240
SfuI TTCGAA 1 cut(s) 263
SinI GGWCC 3 cut(s) 53, 170, 1058
SlaI CTCGAG 1 cut(s) 240
SmiMI CAYNNNNRTG 1 cut(s) 824
SmlI CTYRAG 3 cut(s) 240, 948, 1013
SmoI CTYRAG 3 cut(s) 240, 948, 1013
Sse9I AATT 8 cut(s) 124, 333, 431, 657, 839, 936, 968, 993
SspMI CTAG 1 cut(s) 603
SstI GAGCTC 1 cut(s) 1014
StyD4I CCNGG 2 cut(s) 353, 912
StyI CCWWGG 2 cut(s) 234, 719
TaaI ACNGT 3 cut(s) 519, 826, 836
TaiI ACGT 1 cut(s) 186
TaqI TCGA 4 cut(s) 192, 241, 263, 733
TasI AATT 8 cut(s) 124, 333, 431, 657, 839, 936, 968, 993
TatI WGTACW 1 cut(s) 605
TauI GCSGC 3 cut(s) 93, 203, 220
TfiI GAWTC 5 cut(s) 14, 370, 485, 584, 783
Tru1I TTAA 4 cut(s) 8, 477, 539, 557
Tru9I TTAA 4 cut(s) 8, 477, 539, 557
TscAI CASTG 2 cut(s) 522, 894
TseFI GTSAC 2 cut(s) 184, 817
TseI GCWGC 6 cut(s) 165, 413, 416, 419, 422, 778
Tsp45I GTSAC 2 cut(s) 184, 817
TspDTI ATGAA 2 cut(s) 133, 775
TspGWI ACGGA 1 cut(s) 565
TspRI CASTG 2 cut(s) 522, 894
VpaK11BI GGWCC 3 cut(s) 53, 170, 1058
XapI RAATTY 2 cut(s) 124, 333
XhoI CTCGAG 1 cut(s) 240
XmnI GAANNNNTTC 1 cut(s) 450
XspI CTAG 1 cut(s) 603
ZraI GACGTC 1 cut(s) 184
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.