Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp08

Orthogroup ID

OG0014654

Physical Location & Seq

Genomic Coordinates Forward (+)

10247599 .. 10256123

Gene Structure 8525 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.8G069500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1299 bp

ATGACTCGGCGGTTCACGTCCGACTCCGAGTCTCCGAGCAAGCGATTCCAGGCGTTCGAGTTCAACGCCGACGACGAGGTTGTGGAGAAGCAGTCCGCCAAGATGATCGCCAAATTCCGAAACCTCATGAAGCCCAGGAACAAGAAGAGCACGAAGAACAAGTACCTCGATTCCCCAATTATCAAGTACAAGTTCCTGCACTGCTTTACCAAGAATCTTGAAAAGGAGTTCAGAAATGAAGCGATTGATGTTGATGCTGGAGTTGCACATGGAACAAAGACTCCACAAAAGGAAATTACCACTTTGTTATTAGATGATGATGCTACTGATGTGGGCACAGTAGCAGAGGATGGTGGTGCTGCAGGAGAGGAGATGCCCGGGTTGGATGTCTCTGTGGTTTCTAGTTCTCCAAACCATGAAAAAAACCAAGTATGTGCAATTTCAGATGATGATGAGAGGATTGAAATGTGTTCTTCATCAACTCTGGTCTCAAGTCCTTCAACATCTGAAGCTCCATTAGAAGAACAAGAATCATACCCTGGTTCTGGTGGATATGAAATTGTTGAAACAGCTACAGGTGACCATCAACTTGAATCAAGGGATTCTAGAGCAGCTGCAAATGCATATAAAACTTCAGGACAGGAAGCACTCAGTTCATTGGATGCGAGATATGGGGATGTGTGGATCCTTGATTTTGATTTCAGTAAGTCTTTTGAAGATGTTATCTATCCACAAGGGGATCCTGATGCAGTTTGTATAAGTAAGAGAGATCTTCAGCTTCTACAGCCAGCAACTTTTATTAATGACACTATAGTTGACTTTTATATTCAATACTTAAAAAGTAAAATTCAACCAGAGGAAAAGCATAGGTTCCACTTCTTCAATAGTTTTTTCTTTCGGAAACTTGCTGATCTAGACAAAGATCAACCAGGTGCTTGTGAAGGAAAGGAAGCATTTCAGCGCGTTCTTAAATGGACTAGGAAAGTGAATGTTTTTAAGAAGGATTACATTTTCATTCCTGTAAACTACAGACTGCACTGGAGTTTGATTGTCATCTGTCATCCGGGTGAAGTGGCTAATGTTGAAGATGAGGAAATTGAAAGTTCACCCAAGGTTCCGTGCATCTTGCACATGGATTCAATTAGAGGAAGTCATAGAGGCCTCAAGAATCTTGTTCAAAGCTGCCACAGCAGGAAAATTCATTTGACTGTGGTCTCTTTTTGCTTCATTATGTGGAACGTTTTCTGGAGGAAGCTCCTGTTGAGTTTAGCCCCTTTAAGAAGTTCTCCAACTTTCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004175 GO:0004197 GO:0006464 GO:0006508 GO:0006807 GO:0008150 GO:0008152 GO:0008233 GO:0008234 GO:0009987 GO:0016787 GO:0016926 GO:0016929 GO:0018193 GO:0018205 GO:0019538 GO:0019783 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0070011 GO:0070137 GO:0070139 GO:0070646 GO:0070647 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Peptidase_C48

Protein Analysis

433

Amino Acids

48.99

Weight (kDa)

5.64

Isoelectric Point (pI)

49.05

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0014654)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_2g11700 FvH4_2g11700
prunus_persica	Prupe.8G069500_v2.0.a1 Prupe.8G069500_v2.0.a1
pyrus_communis	pycom10g04120
rosa_chinensis	RchiOBHm_Chr6g0271021
rosa_laevigata	RLG00000013750 RLG00000013751 RLG00000013752
rosa_roxburghii	Rroxscaffold_7G00197420
rosa_rugosa	Rorug06G0057600 Rorug06G0057700
rosa_samantha	Rh6AG177600 Rh6BG180900 Rh6CG176900 Rh6DG169100
rosa_wichuraiana	Rw6G015140

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccII	CGCG	1 cut(s)	963
AciI	CCGC	2 cut(s)	10, 96
AclI	AACGTT	1 cut(s)	1239
AclWI	GGATC	4 cut(s)	679, 692, 734, 747
AcsI	RAATTY	3 cut(s)	113, 846, 1197
AcuI	CTGAAG	3 cut(s)	528, 618, 758
AfaI	GTAC	2 cut(s)	164, 188
AfiI	CCNNNNNNNGG	1 cut(s)	545
AhdI	GACNNNNNGTC	1 cut(s)	28
AjiI	CACGTC	1 cut(s)	18
AjnI	CCWGG	4 cut(s)	48, 134, 538, 928
AloI	GAACNNNNNNTCC	2 cut(s)	265, 297
AluBI	AGCT	6 cut(s)	512, 572, 614, 778, 1182, 1255
AluI	AGCT	6 cut(s)	512, 572, 614, 778, 1182, 1255
Alw21I	GWGCWC	1 cut(s)	152
Alw26I	GTCTC	4 cut(s)	36, 394, 493, 1219
AlwI	GGATC	4 cut(s)	679, 692, 734, 747
Ama87I	CYCGRG	1 cut(s)	377
AoxI	GGCC	1 cut(s)	1159
ApeKI	GCWGC	4 cut(s)	359, 611, 614, 1182
ApoI	RAATTY	3 cut(s)	113, 846, 1197
AseI	ATTAAT	1 cut(s)	801
Asp700I	GAANNNNTTC	2 cut(s)	954, 1241
AspLEI	GCGC	1 cut(s)	963
AsuC2I	CCSGG	3 cut(s)	378, 379, 1065
AsuHPI	GGTGA	3 cut(s)	590, 1079, 1098
AvaI	CYCGRG	1 cut(s)	377
BaeGI	GKGCMC	1 cut(s)	338
BamHI	GGATCC	2 cut(s)	684, 739
BarI	GAAGNNNNNNTAC	2 cut(s)	146, 178
Bbv12I	GWGCWC	1 cut(s)	152
BbvI	GCAGC	4 cut(s)	346, 601, 623, 1169
BccI	CCATC	2 cut(s)	344, 591
BciT130I	CCWGG	4 cut(s)	50, 136, 540, 930
BcnI	CCSGG	3 cut(s)	378, 379, 1065
BcoDI	GTCTC	4 cut(s)	36, 394, 493, 1219
BfaI	CTAG	4 cut(s)	402, 606, 914, 978
BfmI	CTRYAG	5 cut(s)	360, 573, 782, 810, 1027
BglII	AGATCT	1 cut(s)	769
BisI	GCNGC	4 cut(s)	360, 612, 615, 1183
BlsI	GCNGC	4 cut(s)	361, 613, 616, 1184
Bme1390I	CCNGG	7 cut(s)	50, 136, 378, 379, 540, 930, 1065
BmeRI	GACNNNNNGTC	1 cut(s)	28
BmeT110I	CYCGRG	1 cut(s)	377
BmgBI	CACGTC	1 cut(s)	18
BmiI	GGNNCC	4 cut(s)	686, 741, 872, 1116
BmrFI	CCNGG	7 cut(s)	50, 136, 378, 379, 540, 930, 1065
BmsI	GCATC	6 cut(s)	244, 310, 363, 652, 736, 1131
BoxI	GACNNNNGTC	1 cut(s)	1211
BpmI	CTGGAG	3 cut(s)	279, 1060, 1267
BpuEI	CTTGAG	2 cut(s)	475, 1148
BpuMI	CCSGG	3 cut(s)	378, 379, 1065
BsaBI	GATNNNNATC	1 cut(s)	1052
BsaI	GGTCTC	2 cut(s)	493, 1219
BsaJI	CCNNGG	4 cut(s)	134, 377, 538, 1110
BsaXI	ACNNNNNCTCC	4 cut(s)	77, 107, 265, 295
Bsc4I	CCNNNNNNNGG	1 cut(s)	545
Bse1I	ACTGG	1 cut(s)	1043
Bse8I	GATNNNNATC	1 cut(s)	1052
BseBI	CCWGG	4 cut(s)	50, 136, 540, 930
BseDI	CCNNGG	4 cut(s)	134, 377, 538, 1110
BseGI	GGATG	5 cut(s)	355, 391, 667, 682, 1060
BseJI	GATNNNNATC	1 cut(s)	1052
BseLI	CCNNNNNNNGG	1 cut(s)	545
BseMII	CTCAG	1 cut(s)	664
BseNI	ACTGG	1 cut(s)	1043
BseRI	GAGGAG	1 cut(s)	383
BseSI	GKGCMC	1 cut(s)	338
BseXI	GCAGC	4 cut(s)	346, 601, 623, 1169
BsgI	GTGCAG	2 cut(s)	182, 1019
Bsh1236I	CGCG	1 cut(s)	963
BshFI	GGCC	1 cut(s)	1161
BsiHKAI	GWGCWC	1 cut(s)	152
BsiHKCI	CYCGRG	1 cut(s)	377
BsiSI	CCGG	2 cut(s)	378, 1064
BslI	CCNNNNNNNGG	1 cut(s)	545
BsmAI	GTCTC	4 cut(s)	36, 394, 493, 1219
BsnI	GGCC	1 cut(s)	1161
Bso31I	GGTCTC	2 cut(s)	493, 1219
BsoBI	CYCGRG	1 cut(s)	377
Bsp1286I	GDGCHC	2 cut(s)	152, 338
Bsp143I	GATC	6 cut(s)	105, 684, 739, 769, 910, 922
BspACI	CCGC	2 cut(s)	10, 96
BspANI	GGCC	1 cut(s)	1161
BspCNI	CTCAG	1 cut(s)	663
BspFNI	CGCG	1 cut(s)	963
BspHI	TCATGA	1 cut(s)	126
BspLI	GGNNCC	4 cut(s)	686, 741, 872, 1116
BspMAI	CTGCAG	1 cut(s)	364
BspPI	GGATC	4 cut(s)	679, 692, 734, 747
BspQI	GCTCTTC	1 cut(s)	140
BspTNI	GGTCTC	2 cut(s)	493, 1219
BsrI	ACTGG	1 cut(s)	1043
BssECI	CCNNGG	4 cut(s)	134, 377, 538, 1110
BssMI	GATC	6 cut(s)	105, 684, 739, 769, 910, 922
BssT1I	CCWWGG	1 cut(s)	1110
Bst2UI	CCWGG	4 cut(s)	50, 136, 540, 930
Bst4CI	ACNGT	2 cut(s)	340, 1210
Bst6I	CTCTTC	1 cut(s)	140
BstC8I	GCNNGC	2 cut(s)	41, 789
BstDEI	CTNAG	1 cut(s)	650
BstEII	GGTNACC	1 cut(s)	578
BstF5I	GGATG	5 cut(s)	355, 391, 667, 682, 1060
BstFNI	CGCG	1 cut(s)	963
BstHHI	GCGC	1 cut(s)	963
BstKTI	GATC	6 cut(s)	108, 687, 742, 772, 913, 925
BstMAI	GTCTC	4 cut(s)	36, 394, 493, 1219
BstMBI	GATC	6 cut(s)	105, 684, 739, 769, 910, 922
BstMWI	GCNNNNNNNGC	4 cut(s)	263, 620, 784, 1188
BstNI	CCWGG	4 cut(s)	50, 136, 540, 930
BstPAI	GACNNNNGTC	1 cut(s)	1211
BstPI	GGTNACC	1 cut(s)	578
BstSCI	CCNGG	7 cut(s)	48, 134, 376, 377, 538, 928, 1063
BstSFI	CTRYAG	5 cut(s)	360, 573, 782, 810, 1027
BstSLI	GKGCMC	1 cut(s)	338
BstUI	CGCG	1 cut(s)	963
BstV1I	GCAGC	4 cut(s)	346, 601, 623, 1169
BstX2I	RGATCY	3 cut(s)	684, 739, 769
BstYI	RGATCY	3 cut(s)	684, 739, 769
BsuRI	GGCC	1 cut(s)	1161
BtrI	CACGTC	1 cut(s)	18
BtsCI	GGATG	5 cut(s)	355, 391, 667, 682, 1060
BtsI	GCAGTG	1 cut(s)	199
BtsIMutI	CAGTG	2 cut(s)	199, 1036
Cac8I	GCNNGC	2 cut(s)	41, 789
CciI	TCATGA	1 cut(s)	126
CfoI	GCGC	1 cut(s)	963
Cfr9I	CCCGGG	1 cut(s)	377
CsiI	ACCWGGT	1 cut(s)	928
Csp6I	GTAC	2 cut(s)	163, 187
CviAII	CATG	4 cut(s)	127, 269, 416, 1132
CviQI	GTAC	2 cut(s)	163, 187
DdeI	CTNAG	1 cut(s)	650
DpnI	GATC	6 cut(s)	107, 686, 741, 771, 912, 924
DpnII	GATC	6 cut(s)	105, 684, 739, 769, 910, 922
DriI	GACNNNNNGTC	1 cut(s)	28
Eam1104I	CTCTTC	1 cut(s)	140
Eam1105I	GACNNNNNGTC	1 cut(s)	28
EarI	CTCTTC	1 cut(s)	140
EciI	GGCGGA	1 cut(s)	85
Eco130I	CCWWGG	1 cut(s)	1110
Eco147I	AGGCCT	1 cut(s)	1161
Eco31I	GGTCTC	2 cut(s)	493, 1219
Eco57I	CTGAAG	3 cut(s)	528, 618, 758
Eco88I	CYCGRG	1 cut(s)	377
Eco91I	GGTNACC	1 cut(s)	578
EcoO65I	GGTNACC	1 cut(s)	578
EcoRII	CCWGG	4 cut(s)	48, 134, 538, 928
EcoT14I	CCWWGG	1 cut(s)	1110
EcoT22I	ATGCAT	1 cut(s)	625
ErhI	CCWWGG	1 cut(s)	1110
FaeI	CATG	4 cut(s)	130, 272, 419, 1135
FatI	CATG	4 cut(s)	126, 268, 415, 1131
Fnu4HI	GCNGC	4 cut(s)	360, 612, 615, 1183
FokI	GGATG	5 cut(s)	362, 398, 674, 689, 1047
Fsp4HI	GCNGC	4 cut(s)	360, 612, 615, 1183
FspBI	CTAG	4 cut(s)	402, 606, 914, 978
GlaI	GCGC	1 cut(s)	962
GluI	GCNGC	4 cut(s)	360, 612, 615, 1183
GsuI	CTGGAG	3 cut(s)	279, 1060, 1267
HaeIII	GGCC	1 cut(s)	1161
HapII	CCGG	2 cut(s)	378, 1064
HhaI	GCGC	1 cut(s)	963
Hin1II	CATG	4 cut(s)	130, 272, 419, 1135
Hin6I	GCGC	1 cut(s)	961
HinP1I	GCGC	1 cut(s)	961
HincII	GTYRAC	1 cut(s)	817
HindII	GTYRAC	1 cut(s)	817
HpaII	CCGG	2 cut(s)	378, 1064
HphI	GGTGA	3 cut(s)	590, 1079, 1098
Hpy166II	GTNNAC	4 cut(s)	15, 817, 1024, 1106
Hpy188I	TCNGA	8 cut(s)	22, 28, 36, 119, 233, 445, 508, 900
Hpy188III	TCNNGA	8 cut(s)	127, 218, 606, 636, 743, 914, 1165, 1246
Hpy8I	GTNNAC	4 cut(s)	15, 817, 1024, 1106
Hpy99I	CGWCG	2 cut(s)	74, 77
HpyAV	CCTTC	3 cut(s)	507, 935, 994
HpyCH4III	ACNGT	2 cut(s)	340, 1210
HpyCH4IV	ACGT	2 cut(s)	17, 1239
HpyF10VI	GCNNNNNNNGC	4 cut(s)	263, 620, 784, 1188
HpyF3I	CTNAG	1 cut(s)	650
HpySE526I	ACGT	2 cut(s)	17, 1239
Hsp92II	CATG	4 cut(s)	130, 272, 419, 1135
HspAI	GCGC	1 cut(s)	961
Kzo9I	GATC	6 cut(s)	105, 684, 739, 769, 910, 922
LguI	GCTCTTC	1 cut(s)	140
LmnI	GCTCC	2 cut(s)	517, 1260
Lsp1109I	GCAGC	4 cut(s)	346, 601, 623, 1169
LweI	GCATC	6 cut(s)	244, 310, 363, 652, 736, 1131
MabI	ACCWGGT	1 cut(s)	928
MaeI	CTAG	4 cut(s)	402, 606, 914, 978
MaeII	ACGT	2 cut(s)	17, 1239
MaeIII	GTNAC	1 cut(s)	578
MalI	GATC	6 cut(s)	107, 686, 741, 771, 912, 924
MboI	GATC	6 cut(s)	105, 684, 739, 769, 910, 922
MboII	GAAGA	8 cut(s)	157, 166, 465, 533, 728, 764, 871, 1097
MflI	RGATCY	3 cut(s)	684, 739, 769
MhlI	GDGCHC	2 cut(s)	152, 338
MluCI	AATT	9 cut(s)	113, 177, 294, 438, 558, 846, 1095, 1140, 1197
MlyI	GAGTC	3 cut(s)	17, 38, 274
MmeI	TCCRAC	2 cut(s)	45, 363
Mph1103I	ATGCAT	1 cut(s)	625
MroXI	GAANNNNTTC	2 cut(s)	954, 1241
MseI	TTAA	5 cut(s)	801, 836, 969, 996, 1277
MslI	CAYNNNNRTG	1 cut(s)	1065
MspA1I	CMGCKG	1 cut(s)	614
MspI	CCGG	2 cut(s)	378, 1064
MspR9I	CCNGG	7 cut(s)	50, 136, 378, 379, 540, 930, 1065
MvaI	CCWGG	4 cut(s)	50, 136, 540, 930
MvnI	CGCG	1 cut(s)	963
MwoI	GCNNNNNNNGC	4 cut(s)	263, 620, 784, 1188
NciI	CCSGG	3 cut(s)	378, 379, 1065
NdeII	GATC	6 cut(s)	105, 684, 739, 769, 910, 922
NlaIII	CATG	4 cut(s)	130, 272, 419, 1135
NlaIV	GGNNCC	4 cut(s)	686, 741, 872, 1116
NmuCI	GTSAC	1 cut(s)	578
NsiI	ATGCAT	1 cut(s)	625
PagI	TCATGA	1 cut(s)	126
PceI	AGGCCT	1 cut(s)	1161
PciSI	GCTCTTC	1 cut(s)	140
PcsI	WCGNNNNNNNCGW	1 cut(s)	72
PdmI	GAANNNNTTC	2 cut(s)	954, 1241
PfeI	GAWTC	8 cut(s)	45, 170, 214, 530, 593, 602, 1136, 1168
PkrI	GCNGC	4 cut(s)	361, 613, 616, 1184
PleI	GAGTC	3 cut(s)	17, 37, 274
PpsI	GAGTC	3 cut(s)	17, 37, 274
PshAI	GACNNNNGTC	1 cut(s)	1211
PshBI	ATTAAT	1 cut(s)	801
Psp1406I	AACGTT	1 cut(s)	1239
Psp6I	CCWGG	4 cut(s)	48, 134, 538, 928
PspEI	GGTNACC	1 cut(s)	578
PspGI	CCWGG	4 cut(s)	48, 134, 538, 928
PspN4I	GGNNCC	4 cut(s)	686, 741, 872, 1116
PstI	CTGCAG	1 cut(s)	364
PsuI	RGATCY	3 cut(s)	684, 739, 769
PvuII	CAGCTG	1 cut(s)	614
RsaI	GTAC	2 cut(s)	164, 188
RsaNI	GTAC	2 cut(s)	163, 187
RseI	CAYNNNNRTG	1 cut(s)	1065
SapI	GCTCTTC	1 cut(s)	140
SaqAI	TTAA	5 cut(s)	801, 836, 969, 996, 1277
SatI	GCNGC	4 cut(s)	360, 612, 615, 1183
Sau3AI	GATC	6 cut(s)	105, 684, 739, 769, 910, 922
SchI	GAGTC	3 cut(s)	17, 38, 274
ScrFI	CCNGG	7 cut(s)	50, 136, 378, 379, 540, 930, 1065
SduI	GDGCHC	2 cut(s)	152, 338
SexAI	ACCWGGT	1 cut(s)	928
SfaNI	GCATC	6 cut(s)	244, 310, 363, 652, 736, 1131
SfcI	CTRYAG	5 cut(s)	360, 573, 782, 810, 1027
SmaI	CCCGGG	1 cut(s)	379
SmiMI	CAYNNNNRTG	1 cut(s)	1065
SmlI	CTYRAG	2 cut(s)	490, 1163
SmoI	CTYRAG	2 cut(s)	490, 1163
Sse9I	AATT	9 cut(s)	113, 177, 294, 438, 558, 846, 1095, 1140, 1197
SseBI	AGGCCT	1 cut(s)	1161
SsiI	CCGC	2 cut(s)	10, 96
SspMI	CTAG	4 cut(s)	402, 606, 914, 978
StuI	AGGCCT	1 cut(s)	1161
StyD4I	CCNGG	7 cut(s)	48, 134, 376, 377, 538, 928, 1063
StyI	CCWWGG	1 cut(s)	1110
TaaI	ACNGT	2 cut(s)	340, 1210
TaiI	ACGT	2 cut(s)	20, 1242
TaqI	TCGA	2 cut(s)	57, 168
TasI	AATT	9 cut(s)	113, 177, 294, 438, 558, 846, 1095, 1140, 1197
TatI	WGTACW	1 cut(s)	186
TfiI	GAWTC	8 cut(s)	45, 170, 214, 530, 593, 602, 1136, 1168
Tru1I	TTAA	5 cut(s)	801, 836, 969, 996, 1277
Tru9I	TTAA	5 cut(s)	801, 836, 969, 996, 1277
TscAI	CASTG	2 cut(s)	206, 1043
TseFI	GTSAC	1 cut(s)	578
TseI	GCWGC	4 cut(s)	359, 611, 614, 1182
Tsp45I	GTSAC	1 cut(s)	578
TspDTI	ATGAA	9 cut(s)	143, 252, 432, 465, 570, 645, 1003, 1190, 1216
TspGWI	ACGGA	1 cut(s)	1107
TspMI	CCCGGG	1 cut(s)	377
TspRI	CASTG	2 cut(s)	206, 1043
VspI	ATTAAT	1 cut(s)	801
XapI	RAATTY	3 cut(s)	113, 846, 1197
XbaI	TCTAGA	2 cut(s)	605, 913
XmaI	CCCGGG	1 cut(s)	377
XmnI	GAANNNNTTC	2 cut(s)	954, 1241
XspI	CTAG	4 cut(s)	402, 606, 914, 978
Zsp2I	ATGCAT	1 cut(s)	625

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.