Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000007

Orthogroup ID

OG0014654

Physical Location & Seq

Genomic Coordinates Forward (+)

41777075 .. 41785003

Gene Structure 7929 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_7G00197420.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2235 bp

ATGACTCAGCGGTTCGAGTCTCCAAGCAAGCGGTTCTCGGTGTTCGACTTCGACGAAGACGACGTCGTCGAGATTGAGTCCGCCAAATCGAATGCCAAATTTCGAAAGCCCAGGGCTTCCATTCCTTCCAAGAAGAAGAAGAAGAAGAACAAGAAGAGCCCCATTACCAAGTACACGTTTCTCCAATGCTTTTCTAAAGGAGCAAAGACTCCACTCAAGGAAATTAGCAATGTCACAATAGAGGTCGATGCTTTGGGCTCTTCAAATCATCAAACTAAGCAAGTACATAAAATTCCAGATGATGAGGATAGGCTTCACATGTGCTCTTCGACAACTTTGATATCCAGTCCTTCAAAGAATGAAGCTCCGTTAGAAGAACAAGCATCAGAGCCAGGTTCTTGCGGATATGACAATGTTGAAACTGCTTTAAGTAATCTTCGTCTTGAATCAAAGAATTCTCGAAGAGCTGGAAAGAGAAACAAAAAATCAGGTTTGAAACAGTTGAGGTGTGCAGTTTATGACCCTCATTGGTCCAAAAGACAGGAAGAAAATAAATCATTAGATAGCAGATATGGTGATACATGGAACTTTAATTTTGATTCTGATAAGCCTTTTGAAGATGTTATCTATCCAAAAGGGGATCCTGATGCAGTTACTATAAGTAAGAGAGATCTTGAACTTCTTGAGCCAGAGACATTCATTAATGACACCATAATTGACTTCTATATTCTATACTTGAAAAGCAACATTCAACCTGAGGAAAAGCATAGGTTTCACTTCTTCAATAGTTTCTTCTTTCGGAAACTTGCTGATCTGGAGAAAGACCCATCAAGCTCCTGTGAACGCAAGGCAGCTTTTCAGCGTGTTCGGAAATGGACTAGGAAAGTGAATCTGTTTGAAAAGGATTACATCTTCATTCCTGTAAACCACAGGCTCCACTGGAGTTTGATTGTCATTTGTCATCCCGGTGACGTGGCTAATTGTAAAGACGAGGGAATTGAAAGCTTACCCAGGGTGCCATGCATCTTGCATATGGATTCAATTAAAGGAAGCCACAGAGACCTGAAAAATCTTGTTCAAAGATACCTATGTGAAGAGTGGAAAGAGAGGCATGGTGACACAGCAGAAGGTGATTCTTTGAGATTTTTACAATTGAGATTTCTTGAACTGGAGCTACCACAGCAGGAAAATTTATCTGATTGTGGACTCTTTTTGCTTCATTATGTGGAGCGTTTTCTGGCAGAAGCTCCTGTTAACTTTAGCCCTTTTAAGATCACAGAGCTCTCCAACTTTCTAAAGAAAAAGTGGTTCCCTCCTGCTGAGGCTTCTCTTAAACGCCATCAGATTAAGAAGTTGCTATACGATATACTCGATCAATCTAGGGAAGCTGTTATAGCCGATTGTATTAATTTAGATGAATCCCCTCAAGTACTCAAAAATACAGACAATGAAGAACCTGGCATAAAGCATTTTTATGAAATGTCCAATTCAACACAAAAAAGTCATGGGAATTGTTATAGTTTTGATGCACATGGGATCAGAATTACATCGCCAGGAGCTTATTCTTCTCCTAGTCATGTATGCTGCTCTAGAGAAAGGGGACGTGTTGCTGATAAGAATTATCTGCCGTTGACTGCCAATAATATGACGAGTTTTATGTCACCAATACAGGAAGTTGGAGATACTGAGGAAATGACTGATTCGCCGGTCGACATTGAAGCTTGTCCGAAAGTCACTGGATTACCTTCTGATATACTACCCAGGGATACATCTCAGAACCATGGGTTCTCAAAGAACATTGGAGATAATGCTGATGTGAACTCAATTTCTGATACATCTAGTAGTGGATCAGAGATTTTTTCAGTGGTAGGGATAGATGAAGATGACTCACTTGTGGAAGCTGAGGCGTTTAACTGTCCAAGGAAAACAGAGAAATCTGAATCATCTTCAAGTGGGGATCTCACTGCTTGTGTTGTGCAGGATTCTGAAGAGGAAAGTGACATGCATGGCACTGAGGTTAAATGTATCTCATCCTCTTCAGCAAACCAACAATTCTTCCATCAACAAGCAGACTCTACTGGAAACAATAATCATAAAGAGATTAATATGCTATCGAGTAGTGAGGATCAAGCATCCGAATCAGATGAGCGGCAGACTCCAAAAAGACCAAGGCTCACACATCCTGTAGGTCGAAGAAGGCATACAAGAAGCCTCATGAGGGCGTTGCATTTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004175 GO:0004197 GO:0006464 GO:0006508 GO:0006807 GO:0008150 GO:0008152 GO:0008233 GO:0008234 GO:0009987 GO:0016787 GO:0016926 GO:0016929 GO:0018193 GO:0018205 GO:0019538 GO:0019783 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0070011 GO:0070137 GO:0070139 GO:0070646 GO:0070647 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Peptidase_C48

Protein Analysis

744

Amino Acids

84.68

Weight (kDa)

6.07

Isoelectric Point (pI)

55.31

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PH_ULP	PF25352	135 - 196	1.5e-14	Ubiquitin-like protease PH domain
Peptidase_C48	PF02902	233 - 431	3e-33	Ulp1 protease family, C-terminal catalytic domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0014654)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_2g11700 FvH4_2g11700
prunus_persica	Prupe.8G069500_v2.0.a1 Prupe.8G069500_v2.0.a1
pyrus_communis	pycom10g04120
rosa_chinensis	RchiOBHm_Chr6g0271021
rosa_laevigata	RLG00000013750 RLG00000013751 RLG00000013752
rosa_roxburghii	Rroxscaffold_7G00197420
rosa_rugosa	Rorug06G0057600 Rorug06G0057700
rosa_samantha	Rh6AG177600 Rh6BG180900 Rh6CG176900 Rh6DG169100
rosa_wichuraiana	Rw6G015140

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	65
AatII	GACGTC	1 cut(s)	66
AccB1I	GGYRCC	1 cut(s)	1015
AccBSI	CCGCTC	1 cut(s)	2149
AccI	GTMKAC	1 cut(s)	1710
AciI	CCGC	5 cut(s)	10, 31, 81, 402, 2149
AclWI	GGATC	6 cut(s)	635, 648, 1544, 1855, 1965, 2133
AcsI	RAATTY	4 cut(s)	98, 291, 454, 1189
AcuI	CTGAAG	2 cut(s)	2007, 2022
AcyI	GRCGYC	1 cut(s)	63
AfaI	GTAC	3 cut(s)	173, 285, 1431
AfiI	CCNNNNNNNGG	1 cut(s)	2218
AflIII	ACRYGT	3 cut(s)	174, 318, 1603
AjiI	CACGTC	2 cut(s)	973, 1604
AjnI	CCWGG	6 cut(s)	110, 391, 1010, 1456, 1552, 1760
Alw21I	GWGCWC	2 cut(s)	326, 1284
Alw26I	GTCTC	3 cut(s)	24, 686, 1053
AlwI	GGATC	6 cut(s)	635, 648, 1544, 1855, 1965, 2133
ApeKI	GCWGC	2 cut(s)	851, 1584
ApoI	RAATTY	4 cut(s)	98, 291, 454, 1189
ArsI	GACNNNNNNTTYG	2 cut(s)	48, 80
AseI	ATTAAT	3 cut(s)	702, 1407, 2103
AspS9I	GGNCC	1 cut(s)	531
AsuC2I	CCSGG	1 cut(s)	966
AsuHPI	GGTGA	5 cut(s)	587, 980, 1127, 1142, 1653
AsuII	TTCGAA	1 cut(s)	103
AvaII	GGWCC	1 cut(s)	531
AxyI	CCTNAGG	1 cut(s)	756
BaeI	ACNNNNGTAYC	2 cut(s)	1075, 1108
BamHI	GGATCC	1 cut(s)	640
BanI	GGYRCC	1 cut(s)	1015
BanII	GRGCYC	3 cut(s)	161, 260, 1284
BarI	GAAGNNNNNNTAC	4 cut(s)	1343, 1375, 2185, 2217
BbsI	GAAGAC	1 cut(s)	63
Bbv12I	GWGCWC	2 cut(s)	326, 1284
BbvCI	CCTCAGC	2 cut(s)	1320, 1902
BbvI	GCAGC	2 cut(s)	863, 1571
BccI	CCATC	3 cut(s)	835, 1347, 2067
BceAI	ACGGC	1 cut(s)	1612
BciT130I	CCWGG	6 cut(s)	112, 393, 1012, 1458, 1554, 1762
BciVI	GTATCC	1 cut(s)	1759
BcnI	CCSGG	1 cut(s)	966
BcoDI	GTCTC	3 cut(s)	24, 686, 1053
BfaI	CTAG	5 cut(s)	879, 1380, 1572, 1590, 1839
BfmI	CTRYAG	1 cut(s)	2184
BfuI	GTATCC	1 cut(s)	1759
BglII	AGATCT	1 cut(s)	670
BisI	GCNGC	3 cut(s)	852, 1585, 2150
BlsI	GCNGC	3 cut(s)	853, 1586, 2151
BmcAI	AGTACT	1 cut(s)	1431
Bme1390I	CCNGG	7 cut(s)	112, 393, 966, 1012, 1458, 1554, 1762
Bme18I	GGWCC	1 cut(s)	531
BmgBI	CACGTC	2 cut(s)	973, 1604
BmgT120I	GGNCC	1 cut(s)	531
BmiI	GGNNCC	4 cut(s)	642, 935, 1017, 1310
BmrFI	CCNGG	7 cut(s)	112, 393, 966, 1012, 1458, 1554, 1762
BmsI	GCATC	6 cut(s)	238, 392, 637, 1032, 1516, 2141
BpiI	GAAGAC	1 cut(s)	63
BpmI	CTGGAG	3 cut(s)	836, 961, 1190
Bpu10I	CCTNAGC	2 cut(s)	1320, 1902
Bpu14I	TTCGAA	1 cut(s)	103
BpuEI	CTTGAG	3 cut(s)	200, 704, 1410
BpuMI	CCSGG	1 cut(s)	966
BsaHI	GRCGYC	1 cut(s)	63
BsaI	GGTCTC	1 cut(s)	1053
BsaJI	CCNNGG	9 cut(s)	110, 111, 1010, 1011, 1760, 1761, 1780, 1919, 2168
Bsc4I	CCNNNNNNNGG	1 cut(s)	2218
Bse118I	RCCGGY	1 cut(s)	1705
Bse1I	ACTGG	5 cut(s)	345, 944, 1173, 1741, 2083
Bse21I	CCTNAGG	1 cut(s)	756
Bse3DI	GCAATG	1 cut(s)	235
BseBI	CCWGG	6 cut(s)	112, 393, 1012, 1458, 1554, 1762
BseDI	CCNNGG	9 cut(s)	110, 111, 1010, 1011, 1760, 1761, 1780, 1919, 2168
BseGI	GGATG	4 cut(s)	961, 2030, 2132, 2179
BseLI	CCNNNNNNNGG	1 cut(s)	2218
BseMI	GCAATG	1 cut(s)	235
BseMII	CTCAG	7 cut(s)	20, 747, 1311, 1677, 1787, 1893, 2004
BseNI	ACTGG	5 cut(s)	345, 944, 1173, 1741, 2083
BseXI	GCAGC	2 cut(s)	863, 1571
BsgI	GTGCAG	2 cut(s)	531, 1997
Bsh1285I	CGRYCG	1 cut(s)	1710
BshNI	GGYRCC	1 cut(s)	1015
BsiEI	CGRYCG	1 cut(s)	1710
BsiHKAI	GWGCWC	2 cut(s)	326, 1284
BsiSI	CCGG	2 cut(s)	966, 1706
BslFI	GGGAC	1 cut(s)	1614
BslI	CCNNNNNNNGG	1 cut(s)	2218
BsmAI	GTCTC	3 cut(s)	24, 686, 1053
BsmFI	GGGAC	1 cut(s)	1614
BsmI	GAATGC	1 cut(s)	97
Bso31I	GGTCTC	1 cut(s)	1053
Bsp119I	TTCGAA	1 cut(s)	103
Bsp1286I	GDGCHC	4 cut(s)	161, 260, 326, 1284
Bsp143I	GATC	9 cut(s)	640, 670, 811, 1272, 1372, 1536, 1847, 1957, 2125
Bsp19I	CCATGG	1 cut(s)	1780
BspACI	CCGC	5 cut(s)	10, 31, 81, 402, 2149
BspCNI	CTCAG	7 cut(s)	19, 748, 1312, 1678, 1786, 1894, 2005
BspHI	TCATGA	1 cut(s)	2214
BspLI	GGNNCC	4 cut(s)	642, 935, 1017, 1310
BspPI	GGATC	6 cut(s)	635, 648, 1544, 1855, 1965, 2133
BspQI	GCTCTTC	4 cut(s)	149, 265, 331, 457
BspT104I	TTCGAA	1 cut(s)	103
BspT107I	GGYRCC	1 cut(s)	1015
BspTNI	GGTCTC	1 cut(s)	1053
BsrBI	CCGCTC	1 cut(s)	2149
BsrDI	GCAATG	1 cut(s)	235
BsrFI	RCCGGY	1 cut(s)	1705
BsrI	ACTGG	5 cut(s)	345, 944, 1173, 1741, 2083
BssAI	RCCGGY	1 cut(s)	1705
BssECI	CCNNGG	9 cut(s)	110, 111, 1010, 1011, 1760, 1761, 1780, 1919, 2168
BssMI	GATC	9 cut(s)	640, 670, 811, 1272, 1372, 1536, 1847, 1957, 2125
BssNI	GRCGYC	1 cut(s)	63
BssT1I	CCWWGG	3 cut(s)	1780, 1919, 2168
Bst2UI	CCWGG	6 cut(s)	112, 393, 1012, 1458, 1554, 1762
Bst4CI	ACNGT	2 cut(s)	501, 1916
Bst6I	CTCTTC	7 cut(s)	149, 265, 331, 457, 1089, 1983, 2041
BstACI	GRCGYC	1 cut(s)	63
BstBI	TTCGAA	1 cut(s)	103
BstC8I	GCNNGC	1 cut(s)	29
BstDEI	CTNAG	8 cut(s)	6, 276, 756, 1320, 1686, 1773, 1902, 2013
BstDSI	CCRYGG	1 cut(s)	1780
BstF5I	GGATG	4 cut(s)	961, 2030, 2132, 2179
BstKTI	GATC	9 cut(s)	643, 673, 814, 1275, 1375, 1539, 1850, 1960, 2128
BstMAI	GTCTC	3 cut(s)	24, 686, 1053
BstMBI	GATC	9 cut(s)	640, 670, 811, 1272, 1372, 1536, 1847, 1957, 2125
BstMCI	CGRYCG	1 cut(s)	1710
BstMWI	GCNNNNNNNGC	2 cut(s)	1180, 1394
BstNI	CCWGG	6 cut(s)	112, 393, 1012, 1458, 1554, 1762
BstNSI	RCATGY	2 cut(s)	322, 2005
BstSCI	CCNGG	7 cut(s)	110, 391, 964, 1010, 1456, 1552, 1760
BstSFI	CTRYAG	1 cut(s)	2184
BstV1I	GCAGC	2 cut(s)	863, 1571
BstV2I	GAAGAC	1 cut(s)	63
BstX2I	RGATCY	3 cut(s)	640, 670, 1957
BstYI	RGATCY	3 cut(s)	640, 670, 1957
Bsu36I	CCTNAGG	1 cut(s)	756
BsuI	GTATCC	1 cut(s)	1759
BtgI	CCRYGG	1 cut(s)	1780
BtgZI	GCGATG	1 cut(s)	1533
BtrI	CACGTC	2 cut(s)	973, 1604
BtsCI	GGATG	4 cut(s)	961, 2030, 2132, 2179
BtsI	GCAGTG	1 cut(s)	1962
BtsIMutI	CAGTG	5 cut(s)	937, 1734, 1869, 1962, 2010
Cac8I	GCNNGC	1 cut(s)	29
CciI	TCATGA	1 cut(s)	2214
Cfr10I	RCCGGY	1 cut(s)	1705
Cfr13I	GGNCC	1 cut(s)	531
Csp6I	GTAC	3 cut(s)	172, 284, 1430
CviQI	GTAC	3 cut(s)	172, 284, 1430
DdeI	CTNAG	8 cut(s)	6, 276, 756, 1320, 1686, 1773, 1902, 2013
DpnI	GATC	9 cut(s)	642, 672, 813, 1274, 1374, 1538, 1849, 1959, 2127
DpnII	GATC	9 cut(s)	640, 670, 811, 1272, 1372, 1536, 1847, 1957, 2125
DrdI	GACNNNNNNGTC	1 cut(s)	65
DseDI	GACNNNNNNGTC	1 cut(s)	65
Eam1104I	CTCTTC	7 cut(s)	149, 265, 331, 457, 1089, 1983, 2041
EarI	CTCTTC	7 cut(s)	149, 265, 331, 457, 1089, 1983, 2041
EciI	GGCGGA	1 cut(s)	70
Ecl136II	GAGCTC	1 cut(s)	1282
Eco130I	CCWWGG	3 cut(s)	1780, 1919, 2168
Eco24I	GRGCYC	3 cut(s)	161, 260, 1284
Eco31I	GGTCTC	1 cut(s)	1053
Eco32I	GATATC	1 cut(s)	342
Eco47I	GGWCC	1 cut(s)	531
Eco53kI	GAGCTC	1 cut(s)	1282
Eco57I	CTGAAG	2 cut(s)	2007, 2022
Eco81I	CCTNAGG	1 cut(s)	756
EcoICRI	GAGCTC	1 cut(s)	1282
EcoRI	GAATTC	1 cut(s)	454
EcoRII	CCWGG	6 cut(s)	110, 391, 1010, 1456, 1552, 1760
EcoRV	GATATC	1 cut(s)	342
EcoT14I	CCWWGG	3 cut(s)	1780, 1919, 2168
EcoT22I	ATGCAT	2 cut(s)	1025, 2007
EcoT38I	GRGCYC	3 cut(s)	161, 260, 1284
ErhI	CCWWGG	3 cut(s)	1780, 1919, 2168
FaqI	GGGAC	1 cut(s)	1614
FauNDI	CATATG	1 cut(s)	1032
FblI	GTMKAC	1 cut(s)	1710
Fnu4HI	GCNGC	3 cut(s)	852, 1585, 2150
FokI	GGATG	4 cut(s)	948, 2017, 2119, 2166
FriOI	GRGCYC	3 cut(s)	161, 260, 1284
Fsp4HI	GCNGC	3 cut(s)	852, 1585, 2150
FspBI	CTAG	5 cut(s)	879, 1380, 1572, 1590, 1839
GluI	GCNGC	3 cut(s)	852, 1585, 2150
GsuI	CTGGAG	3 cut(s)	836, 961, 1190
HapII	CCGG	2 cut(s)	966, 1706
Hin1I	GRCGYC	1 cut(s)	63
HincII	GTYRAC	3 cut(s)	1255, 1632, 1711
HindII	GTYRAC	3 cut(s)	1255, 1632, 1711
HindIII	AAGCTT	2 cut(s)	1003, 1719
HpaI	GTTAAC	1 cut(s)	1255
HpaII	CCGG	2 cut(s)	966, 1706
HphI	GGTGA	5 cut(s)	587, 980, 1127, 1142, 1653
Hpy166II	GTNNAC	8 cut(s)	174, 842, 925, 1205, 1255, 1632, 1711, 1819
Hpy8I	GTNNAC	8 cut(s)	174, 842, 925, 1205, 1255, 1632, 1711, 1819
Hpy99I	CGWCG	4 cut(s)	56, 65, 68, 71
HpyAV	CCTTC	5 cut(s)	135, 360, 1121, 1755, 2190
HpyCH4III	ACNGT	2 cut(s)	501, 1916
HpyCH4IV	ACGT	4 cut(s)	63, 176, 972, 1603
HpyCH4V	TGCA	8 cut(s)	512, 650, 1023, 1030, 1529, 1978, 2005, 2227
HpyF10VI	GCNNNNNNNGC	2 cut(s)	1180, 1394
HpyF3I	CTNAG	8 cut(s)	6, 276, 756, 1320, 1686, 1773, 1902, 2013
HpySE526I	ACGT	4 cut(s)	63, 176, 972, 1603
Hsp92I	GRCGYC	1 cut(s)	63
KspAI	GTTAAC	1 cut(s)	1255
Kzo9I	GATC	9 cut(s)	640, 670, 811, 1272, 1372, 1536, 1847, 1957, 2125
LguI	GCTCTTC	4 cut(s)	149, 265, 331, 457
LmnI	GCTCC	8 cut(s)	200, 370, 839, 939, 1171, 1228, 1252, 1556
Lsp1109I	GCAGC	2 cut(s)	863, 1571
LweI	GCATC	6 cut(s)	238, 392, 637, 1032, 1516, 2141
MaeI	CTAG	5 cut(s)	879, 1380, 1572, 1590, 1839
MaeII	ACGT	4 cut(s)	63, 176, 972, 1603
MaeIII	GTNAC	7 cut(s)	232, 652, 968, 1115, 1659, 1732, 1997
MalI	GATC	9 cut(s)	642, 672, 813, 1274, 1374, 1538, 1849, 1959, 2127
MbiI	CCGCTC	1 cut(s)	2149
MboI	GATC	9 cut(s)	640, 670, 811, 1272, 1372, 1536, 1847, 1957, 2125
MfeI	CAATTG	1 cut(s)	1151
MflI	RGATCY	3 cut(s)	640, 670, 1957
MhlI	GDGCHC	4 cut(s)	161, 260, 326, 1284
MlyI	GAGTC	7 cut(s)	26, 86, 202, 1200, 1880, 2066, 2149
MmeI	TCCRAC	2 cut(s)	1311, 1657
Mph1103I	ATGCAT	2 cut(s)	1025, 2007
MslI	CAYNNNNRTG	2 cut(s)	966, 1473
MspA1I	CMGCKG	1 cut(s)	10
MspI	CCGG	2 cut(s)	966, 1706
MspR9I	CCNGG	7 cut(s)	112, 393, 966, 1012, 1458, 1554, 1762
MunI	CAATTG	1 cut(s)	1151
Mva1269I	GAATGC	1 cut(s)	97
MvaI	CCWGG	6 cut(s)	112, 393, 1012, 1458, 1554, 1762
MwoI	GCNNNNNNNGC	2 cut(s)	1180, 1394
NciI	CCSGG	1 cut(s)	966
NcoI	CCATGG	1 cut(s)	1780
NdeI	CATATG	1 cut(s)	1032
NdeII	GATC	9 cut(s)	640, 670, 811, 1272, 1372, 1536, 1847, 1957, 2125
NlaIV	GGNNCC	4 cut(s)	642, 935, 1017, 1310
NmuCI	GTSAC	6 cut(s)	232, 968, 1115, 1659, 1732, 1997
NsiI	ATGCAT	2 cut(s)	1025, 2007
NspI	RCATGY	2 cut(s)	322, 2005
NspV	TTCGAA	1 cut(s)	103
PagI	TCATGA	1 cut(s)	2214
PasI	CCCWGGG	3 cut(s)	111, 1011, 1761
PciI	ACATGT	1 cut(s)	318
PciSI	GCTCTTC	4 cut(s)	149, 265, 331, 457
PcsI	WCGNNNNNNNCGW	5 cut(s)	51, 57, 60, 66, 1368
PctI	GAATGC	1 cut(s)	97
PflFI	GACNNNGTC	2 cut(s)	62, 65
PkrI	GCNGC	3 cut(s)	853, 1586, 2151
PleI	GAGTC	7 cut(s)	25, 85, 202, 1200, 1880, 2066, 2149
PpsI	GAGTC	7 cut(s)	25, 85, 202, 1200, 1880, 2066, 2149
PscI	ACATGT	1 cut(s)	318
PshBI	ATTAAT	3 cut(s)	702, 1407, 2103
Psp124BI	GAGCTC	1 cut(s)	1284
Psp6I	CCWGG	6 cut(s)	110, 391, 1010, 1456, 1552, 1760
PspGI	CCWGG	6 cut(s)	110, 391, 1010, 1456, 1552, 1760
PspN4I	GGNNCC	4 cut(s)	642, 935, 1017, 1310
PspPI	GGNCC	1 cut(s)	531
PsrI	GAACNNNNNNTAC	2 cut(s)	1158, 1190
PsuI	RGATCY	3 cut(s)	640, 670, 1957
PsyI	GACNNNGTC	2 cut(s)	62, 65
RsaI	GTAC	3 cut(s)	173, 285, 1431
RsaNI	GTAC	3 cut(s)	172, 284, 1430
RseI	CAYNNNNRTG	2 cut(s)	966, 1473
SacI	GAGCTC	1 cut(s)	1284
SalI	GTCGAC	1 cut(s)	1709
SapI	GCTCTTC	4 cut(s)	149, 265, 331, 457
SatI	GCNGC	3 cut(s)	852, 1585, 2150
Sau3AI	GATC	9 cut(s)	640, 670, 811, 1272, 1372, 1536, 1847, 1957, 2125
Sau96I	GGNCC	1 cut(s)	531
ScaI	AGTACT	1 cut(s)	1431
SchI	GAGTC	7 cut(s)	26, 86, 202, 1200, 1880, 2066, 2149
ScrFI	CCNGG	7 cut(s)	112, 393, 966, 1012, 1458, 1554, 1762
SduI	GDGCHC	4 cut(s)	161, 260, 326, 1284
SfaNI	GCATC	6 cut(s)	238, 392, 637, 1032, 1516, 2141
SfcI	CTRYAG	1 cut(s)	2184
SfuI	TTCGAA	1 cut(s)	103
SinI	GGWCC	1 cut(s)	531
SmiMI	CAYNNNNRTG	2 cut(s)	966, 1473
SmlI	CTYRAG	3 cut(s)	215, 683, 1425
SmoI	CTYRAG	3 cut(s)	215, 683, 1425
SsiI	CCGC	5 cut(s)	10, 31, 81, 402, 2149
SspMI	CTAG	5 cut(s)	879, 1380, 1572, 1590, 1839
SstI	GAGCTC	1 cut(s)	1284
StyD4I	CCNGG	7 cut(s)	110, 391, 964, 1010, 1456, 1552, 1760
StyI	CCWWGG	3 cut(s)	1780, 1919, 2168
TaaI	ACNGT	2 cut(s)	501, 1916
TaiI	ACGT	4 cut(s)	66, 179, 975, 1606
TatI	WGTACW	3 cut(s)	171, 283, 1429
TauI	GCSGC	1 cut(s)	2152
TscAI	CASTG	5 cut(s)	944, 1741, 1869, 1969, 2017
TseFI	GTSAC	6 cut(s)	232, 968, 1115, 1659, 1732, 1997
TseI	GCWGC	2 cut(s)	851, 1584
Tsp45I	GTSAC	6 cut(s)	232, 968, 1115, 1659, 1732, 1997
TspDTI	ATGAA	8 cut(s)	375, 688, 904, 1208, 1431, 1464, 1491, 1893
TspGWI	ACGGA	1 cut(s)	357
TspRI	CASTG	5 cut(s)	944, 1741, 1869, 1969, 2017
Tth111I	GACNNNGTC	2 cut(s)	62, 65
VpaK11BI	GGWCC	1 cut(s)	531
VspI	ATTAAT	3 cut(s)	702, 1407, 2103
XapI	RAATTY	4 cut(s)	98, 291, 454, 1189
XbaI	TCTAGA	1 cut(s)	1589
XceI	RCATGY	2 cut(s)	322, 2005
XmiI	GTMKAC	1 cut(s)	1710
XspI	CTAG	5 cut(s)	879, 1380, 1572, 1590, 1839
ZraI	GACGTC	1 cut(s)	64
ZrmI	AGTACT	1 cut(s)	1431
Zsp2I	ATGCAT	2 cut(s)	1025, 2007

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.