Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr6

Orthogroup ID

OG0014654

Physical Location & Seq

Genomic Coordinates Reverse (-)

28323128 .. 28330743

Gene Structure 7616 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw6G015140.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2121 bp

ATGACTCAGCGGTTCGAGTCTCCAAGCAAGCGGTTCTCGGTGTTCGACTTCGACGAAGACGACGTCGTCGAGGTTGAGTCCGCCAAATTGAATGCCAAATTTCGAAAGCCCAGGGCTTCCATTCCTTCCGAGAAGAAGAAGAAGAAGAGAAGAAGAAGAAGAAGAGCCCCATTACCAATTTCTAAAGGAGCAAAGACTCCACTCAAGGAAATTAGCAATGTCACAATAGAGGTCGATGCTTTGGGCTCTTCAAATCATCAAACTAAGCAAGTACATAAAATTCCAGATGATGAGGATAGGCTGAATGAAGCTACGTTAGAAGAACAAGCATCACAGCCAGGTTCTTGCGGATATGACAATGTTGAAAATAGTAATCTTCGTCTTGAATCAAAGAATTCTAGAAGAGCTGGAAAGAGAAACAAAAAATCAGGTTTGAAACAGTTGAGGTGTGGAGTTTATGACCCTCATTGGTCCAAAAGACAGGAAGAAAATAAATCATTAGATAGCAGATACGGTGATACATGGAACTTTAATTTTGATTCTGATAAGCCTTTTGAAGATGTTATCTATCCAAAAGGGGATCCTGATGCAGTTACTATAAGTAAGAGAGATCTTGAACTTCTTGAGCCAGAGACATTCATTAATGACACCATCATTGACTTCTATATTCTATACTTGAAAAGCAACATTCAACCTGAGGAAAAGCATAGGTTTCACTTCTTCAATAGTTTCTTCTTTCGGAAACTTGCTGATCTGGAGAAAGACCCATCAAGTTCCTGTGAACGCAATGCAGCTTTTCAGCGTGTTCGGAAATGGACTAGGAAAGTGAATCTGTTTGAAAAGGATTACATCTTCATTCCTGTAAACCACAGGCTCCACTGGAGTTTGATTGTCATTTGTCATCCCGGTGAAGTGGCTAATTGTGAAGAAGAGGGAATTGAAAGCTTACCCAGGGTGCCATGCATCTTGCATATGGATTCAATTAAAGGAAGCCACAGAGACCTGAAAAATCTTGTTCAAAGATACCTATGTGAAGAGTGGAAAGAGAGGCATGGTGACACAGCAGAAGGTGATTCTTTGAGATTTTTACAATTGAGATTTCTTGAACTGGAGCTACCACAGCAGGAAAATTTATCTGATTGTGGACTCTTTTTGCTTCATTATGTGGAGCGTTTTCTGGCAGAAGCTCCTGTTAAATTTAGCCCTTTTAAGATCACAGAGCTCTCCAACTTTCTAAAGAAAAAGTGGTTCCCTCCAGCTGAGGCTTCTCTTAAACGCCATCAGATTAAGAAGTTGCTATACGATATCCTCGATCAATCTCGGGAAACTGTTATAGCCGATTGTATTAATTTAGATGAATCCCCTCAAGTACTCAAAAATACAGACAATGAAGAACCTGGCATAACGCATTTTTACGAAATGTCCAATTCAACACAAAAAATTCATGGGAATTGTTATAGTTCTGATGCACATGGGATCAGAATTACATCGCCAGGAGCTTATTCTTCTCCTAGTCATGTATGCTGCTCTAGAGAAAGGGGACGTGTTGCTGATAAGAATTATCTGCCGTTGACTGCCAATAATATGACGAGTTTTATGTCACCAATACAGGAAGTTGGAGATGCTGAGGAAATGACTGATTCGCCGGTAGACATTGAAGCTTGTCCGAAAGACACTGCATTACCTTCTGATACATCTCAGAACCATGGGTTCTCAAAGAACATTGGAGATAATGCTGATGTGAACTCAATTTCTGATACATCTGGTAGTGGATCAGAGATTTTTTCAGTGGTAGGGATAGATGAAGATGACTCACTTAAATCTGAGTCGTCTTCAAGTGGGGATCTCACTGCTTGTGTTGTGCAGGATTCTGAAGAGGAAAGTGACATGCATGGCACTGAGGTTATATGTATCTCATCCTCTCTAGCAAACCAACAATTCTTCCATCAACAAGCACACTCTACTGGAAACAATAATCATAAAGAGATTAATATGCTATCGAGTAGTGAGGATCAAGAATCCGAATCAGATGAGCGGCAGACTCCAAAAAGACCAAGGCTCACACATCCTGTAGGTCGAAGAAGGCATACAAGAAGCCTCATGAGAGCGTTGCATTTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004175 GO:0004197 GO:0006464 GO:0006508 GO:0006807 GO:0008150 GO:0008152 GO:0008233 GO:0008234 GO:0009987 GO:0016787 GO:0016926 GO:0016929 GO:0018193 GO:0018205 GO:0019538 GO:0019783 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0070011 GO:0070137 GO:0070139 GO:0070646 GO:0070647 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Peptidase_C48

Protein Analysis

706

Amino Acids

80.67

Weight (kDa)

5.92

Isoelectric Point (pI)

59.06

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PH_ULP	PF25352	125 - 176	5.7e-11	Ubiquitin-like protease PH domain
Peptidase_C48	PF02902	213 - 411	4.1e-33	Ulp1 protease family, C-terminal catalytic domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0014654)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_2g11700 FvH4_2g11700
prunus_persica	Prupe.8G069500_v2.0.a1 Prupe.8G069500_v2.0.a1
pyrus_communis	pycom10g04120
rosa_chinensis	RchiOBHm_Chr6g0271021
rosa_laevigata	RLG00000013750 RLG00000013751 RLG00000013752
rosa_roxburghii	Rroxscaffold_7G00197420
rosa_rugosa	Rorug06G0057600 Rorug06G0057700
rosa_samantha	Rh6AG177600 Rh6BG180900 Rh6CG176900 Rh6DG169100
rosa_wichuraiana	Rw6G015140

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	65
AatII	GACGTC	1 cut(s)	66
AccB1I	GGYRCC	1 cut(s)	955
AccBSI	CCGCTC	1 cut(s)	2035
AccI	GTMKAC	1 cut(s)	1650
AciI	CCGC	5 cut(s)	10, 31, 81, 348, 2035
AclWI	GGATC	6 cut(s)	575, 588, 1484, 1780, 1851, 2019
AcsI	RAATTY	6 cut(s)	98, 279, 394, 1129, 1196, 1440
AcuI	CTGAAG	1 cut(s)	1893
AcyI	GRCGYC	1 cut(s)	63
AfaI	GTAC	2 cut(s)	273, 1371
AflIII	ACRYGT	1 cut(s)	1543
AjiI	CACGTC	1 cut(s)	1544
AjnI	CCWGG	5 cut(s)	110, 337, 950, 1396, 1492
Alw21I	GWGCWC	1 cut(s)	1224
Alw26I	GTCTC	3 cut(s)	24, 626, 993
AlwI	GGATC	6 cut(s)	575, 588, 1484, 1780, 1851, 2019
Ama87I	CYCGRG	1 cut(s)	1320
ApeKI	GCWGC	2 cut(s)	791, 1524
ApoI	RAATTY	6 cut(s)	98, 279, 394, 1129, 1196, 1440
ArsI	GACNNNNNNTTYG	2 cut(s)	48, 80
AseI	ATTAAT	3 cut(s)	642, 1347, 1989
AspS9I	GGNCC	1 cut(s)	471
AsuC2I	CCSGG	1 cut(s)	906
AsuHPI	GGTGA	5 cut(s)	527, 920, 1067, 1082, 1593
AsuII	TTCGAA	1 cut(s)	103
AvaI	CYCGRG	1 cut(s)	1320
AvaII	GGWCC	1 cut(s)	471
AxyI	CCTNAGG	1 cut(s)	696
BaeI	ACNNNNGTAYC	2 cut(s)	1015, 1048
BamHI	GGATCC	1 cut(s)	580
BanI	GGYRCC	1 cut(s)	955
BanII	GRGCYC	3 cut(s)	169, 248, 1224
BarI	GAAGNNNNNNTAC	4 cut(s)	1283, 1315, 2071, 2103
BbsI	GAAGAC	2 cut(s)	63, 1824
Bbv12I	GWGCWC	1 cut(s)	1224
BbvCI	CCTCAGC	2 cut(s)	1260, 1626
BbvI	GCAGC	2 cut(s)	803, 1511
BccI	CCATC	4 cut(s)	659, 775, 1287, 1953
BceAI	ACGGC	1 cut(s)	1552
BciT130I	CCWGG	5 cut(s)	112, 339, 952, 1398, 1494
BcnI	CCSGG	1 cut(s)	906
BcoDI	GTCTC	3 cut(s)	24, 626, 993
BfaI	CTAG	5 cut(s)	399, 819, 1512, 1530, 1925
BfmI	CTRYAG	1 cut(s)	2070
BglII	AGATCT	1 cut(s)	610
BisI	GCNGC	3 cut(s)	792, 1525, 2036
BlsI	GCNGC	3 cut(s)	793, 1526, 2037
BmcAI	AGTACT	1 cut(s)	1371
Bme1390I	CCNGG	6 cut(s)	112, 339, 906, 952, 1398, 1494
Bme18I	GGWCC	1 cut(s)	471
BmeT110I	CYCGRG	1 cut(s)	1320
BmgBI	CACGTC	1 cut(s)	1544
BmgT120I	GGNCC	1 cut(s)	471
BmiI	GGNNCC	4 cut(s)	582, 875, 957, 1250
BmrFI	CCNGG	6 cut(s)	112, 339, 906, 952, 1398, 1494
BmsI	GCATC	6 cut(s)	226, 338, 577, 972, 1456, 1612
BpiI	GAAGAC	2 cut(s)	63, 1824
BpmI	CTGGAG	4 cut(s)	776, 901, 1130, 1239
Bpu10I	CCTNAGC	2 cut(s)	1260, 1626
Bpu14I	TTCGAA	1 cut(s)	103
BpuEI	CTTGAG	3 cut(s)	188, 644, 1350
BpuMI	CCSGG	1 cut(s)	906
BsaHI	GRCGYC	1 cut(s)	63
BsaI	GGTCTC	1 cut(s)	993
BsaJI	CCNNGG	6 cut(s)	110, 111, 950, 951, 1705, 2054
Bse118I	RCCGGY	1 cut(s)	1645
Bse1I	ACTGG	3 cut(s)	884, 1113, 1969
Bse21I	CCTNAGG	1 cut(s)	696
Bse3DI	GCAATG	2 cut(s)	223, 793
BseBI	CCWGG	5 cut(s)	112, 339, 952, 1398, 1494
BseDI	CCNNGG	6 cut(s)	110, 111, 950, 951, 1705, 2054
BseGI	GGATG	3 cut(s)	901, 1916, 2065
BseMI	GCAATG	2 cut(s)	223, 793
BseMII	CTCAG	7 cut(s)	20, 687, 1251, 1617, 1712, 1815, 1890
BseNI	ACTGG	3 cut(s)	884, 1113, 1969
BseXI	GCAGC	2 cut(s)	803, 1511
BsgI	GTGCAG	1 cut(s)	1883
BshNI	GGYRCC	1 cut(s)	955
BsiHKAI	GWGCWC	1 cut(s)	1224
BsiHKCI	CYCGRG	1 cut(s)	1320
BsiSI	CCGG	2 cut(s)	906, 1646
BslFI	GGGAC	1 cut(s)	1554
BsmAI	GTCTC	3 cut(s)	24, 626, 993
BsmFI	GGGAC	1 cut(s)	1554
BsmI	GAATGC	1 cut(s)	97
Bso31I	GGTCTC	1 cut(s)	993
BsoBI	CYCGRG	1 cut(s)	1320
Bsp119I	TTCGAA	1 cut(s)	103
Bsp1286I	GDGCHC	3 cut(s)	169, 248, 1224
Bsp143I	GATC	9 cut(s)	580, 610, 751, 1212, 1312, 1476, 1772, 1843, 2011
Bsp19I	CCATGG	1 cut(s)	1705
BspACI	CCGC	5 cut(s)	10, 31, 81, 348, 2035
BspCNI	CTCAG	7 cut(s)	19, 688, 1252, 1618, 1711, 1816, 1891
BspHI	TCATGA	1 cut(s)	2100
BspLI	GGNNCC	4 cut(s)	582, 875, 957, 1250
BspPI	GGATC	6 cut(s)	575, 588, 1484, 1780, 1851, 2019
BspQI	GCTCTTC	3 cut(s)	157, 253, 397
BspT104I	TTCGAA	1 cut(s)	103
BspT107I	GGYRCC	1 cut(s)	955
BspTNI	GGTCTC	1 cut(s)	993
BsrBI	CCGCTC	1 cut(s)	2035
BsrDI	GCAATG	2 cut(s)	223, 793
BsrFI	RCCGGY	1 cut(s)	1645
BsrI	ACTGG	3 cut(s)	884, 1113, 1969
BssAI	RCCGGY	1 cut(s)	1645
BssECI	CCNNGG	6 cut(s)	110, 111, 950, 951, 1705, 2054
BssMI	GATC	9 cut(s)	580, 610, 751, 1212, 1312, 1476, 1772, 1843, 2011
BssNI	GRCGYC	1 cut(s)	63
BssT1I	CCWWGG	2 cut(s)	1705, 2054
Bst2UI	CCWGG	5 cut(s)	112, 339, 952, 1398, 1494
Bst4CI	ACNGT	3 cut(s)	441, 515, 1330
Bst6I	CTCTTC	7 cut(s)	140, 157, 253, 397, 924, 1029, 1869
BstACI	GRCGYC	1 cut(s)	63
BstBI	TTCGAA	1 cut(s)	103
BstC8I	GCNNGC	1 cut(s)	29
BstDEI	CTNAG	8 cut(s)	6, 264, 696, 1260, 1626, 1698, 1824, 1899
BstDSI	CCRYGG	1 cut(s)	1705
BstF5I	GGATG	3 cut(s)	901, 1916, 2065
BstKTI	GATC	9 cut(s)	583, 613, 754, 1215, 1315, 1479, 1775, 1846, 2014
BstMAI	GTCTC	3 cut(s)	24, 626, 993
BstMBI	GATC	9 cut(s)	580, 610, 751, 1212, 1312, 1476, 1772, 1843, 2011
BstMWI	GCNNNNNNNGC	1 cut(s)	1120
BstNI	CCWGG	5 cut(s)	112, 339, 952, 1398, 1494
BstNSI	RCATGY	1 cut(s)	1891
BstSCI	CCNGG	6 cut(s)	110, 337, 904, 950, 1396, 1492
BstSFI	CTRYAG	1 cut(s)	2070
BstV1I	GCAGC	2 cut(s)	803, 1511
BstV2I	GAAGAC	2 cut(s)	63, 1824
BstX2I	RGATCY	3 cut(s)	580, 610, 1843
BstYI	RGATCY	3 cut(s)	580, 610, 1843
Bsu36I	CCTNAGG	1 cut(s)	696
BtgI	CCRYGG	1 cut(s)	1705
BtgZI	GCGATG	1 cut(s)	1473
BtrI	CACGTC	1 cut(s)	1544
BtsCI	GGATG	3 cut(s)	901, 1916, 2065
BtsI	GCAGTG	2 cut(s)	1674, 1848
BtsIMutI	CAGTG	5 cut(s)	877, 1674, 1794, 1848, 1896
Cac8I	GCNNGC	1 cut(s)	29
CciI	TCATGA	1 cut(s)	2100
Cfr10I	RCCGGY	1 cut(s)	1645
Cfr13I	GGNCC	1 cut(s)	471
Csp6I	GTAC	2 cut(s)	272, 1370
CviQI	GTAC	2 cut(s)	272, 1370
DdeI	CTNAG	8 cut(s)	6, 264, 696, 1260, 1626, 1698, 1824, 1899
DpnI	GATC	9 cut(s)	582, 612, 753, 1214, 1314, 1478, 1774, 1845, 2013
DpnII	GATC	9 cut(s)	580, 610, 751, 1212, 1312, 1476, 1772, 1843, 2011
DrdI	GACNNNNNNGTC	1 cut(s)	65
DseDI	GACNNNNNNGTC	1 cut(s)	65
Eam1104I	CTCTTC	7 cut(s)	140, 157, 253, 397, 924, 1029, 1869
EarI	CTCTTC	7 cut(s)	140, 157, 253, 397, 924, 1029, 1869
EciI	GGCGGA	1 cut(s)	70
Ecl136II	GAGCTC	1 cut(s)	1222
Eco130I	CCWWGG	2 cut(s)	1705, 2054
Eco24I	GRGCYC	3 cut(s)	169, 248, 1224
Eco31I	GGTCTC	1 cut(s)	993
Eco32I	GATATC	1 cut(s)	1306
Eco47I	GGWCC	1 cut(s)	471
Eco53kI	GAGCTC	1 cut(s)	1222
Eco57I	CTGAAG	1 cut(s)	1893
Eco81I	CCTNAGG	1 cut(s)	696
Eco88I	CYCGRG	1 cut(s)	1320
EcoICRI	GAGCTC	1 cut(s)	1222
EcoRI	GAATTC	1 cut(s)	394
EcoRII	CCWGG	5 cut(s)	110, 337, 950, 1396, 1492
EcoRV	GATATC	1 cut(s)	1306
EcoT14I	CCWWGG	2 cut(s)	1705, 2054
EcoT22I	ATGCAT	2 cut(s)	965, 1893
EcoT38I	GRGCYC	3 cut(s)	169, 248, 1224
ErhI	CCWWGG	2 cut(s)	1705, 2054
FaqI	GGGAC	1 cut(s)	1554
FauNDI	CATATG	1 cut(s)	972
FblI	GTMKAC	1 cut(s)	1650
Fnu4HI	GCNGC	3 cut(s)	792, 1525, 2036
FokI	GGATG	3 cut(s)	888, 1903, 2052
FriOI	GRGCYC	3 cut(s)	169, 248, 1224
Fsp4HI	GCNGC	3 cut(s)	792, 1525, 2036
FspBI	CTAG	5 cut(s)	399, 819, 1512, 1530, 1925
GluI	GCNGC	3 cut(s)	792, 1525, 2036
GsuI	CTGGAG	4 cut(s)	776, 901, 1130, 1239
HapII	CCGG	2 cut(s)	906, 1646
Hin1I	GRCGYC	1 cut(s)	63
HincII	GTYRAC	1 cut(s)	1572
HindII	GTYRAC	1 cut(s)	1572
HindIII	AAGCTT	2 cut(s)	943, 1659
HpaII	CCGG	2 cut(s)	906, 1646
HphI	GGTGA	5 cut(s)	527, 920, 1067, 1082, 1593
Hpy166II	GTNNAC	6 cut(s)	782, 865, 1145, 1572, 1651, 1744
Hpy8I	GTNNAC	6 cut(s)	782, 865, 1145, 1572, 1651, 1744
Hpy99I	CGWCG	4 cut(s)	56, 65, 68, 71
HpyAV	CCTTC	4 cut(s)	135, 1061, 1695, 2076
HpyCH4III	ACNGT	3 cut(s)	441, 515, 1330
HpyCH4IV	ACGT	3 cut(s)	63, 314, 1543
HpyCH4V	TGCA	9 cut(s)	590, 791, 963, 970, 1469, 1679, 1864, 1891, 2113
HpyF10VI	GCNNNNNNNGC	1 cut(s)	1120
HpyF3I	CTNAG	8 cut(s)	6, 264, 696, 1260, 1626, 1698, 1824, 1899
HpySE526I	ACGT	3 cut(s)	63, 314, 1543
Hsp92I	GRCGYC	1 cut(s)	63
Kzo9I	GATC	9 cut(s)	580, 610, 751, 1212, 1312, 1476, 1772, 1843, 2011
LguI	GCTCTTC	3 cut(s)	157, 253, 397
LmnI	GCTCC	6 cut(s)	188, 879, 1111, 1168, 1192, 1496
Lsp1109I	GCAGC	2 cut(s)	803, 1511
LweI	GCATC	6 cut(s)	226, 338, 577, 972, 1456, 1612
MaeI	CTAG	5 cut(s)	399, 819, 1512, 1530, 1925
MaeII	ACGT	3 cut(s)	63, 314, 1543
MaeIII	GTNAC	5 cut(s)	220, 592, 1055, 1599, 1883
MalI	GATC	9 cut(s)	582, 612, 753, 1214, 1314, 1478, 1774, 1845, 2013
MbiI	CCGCTC	1 cut(s)	2035
MboI	GATC	9 cut(s)	580, 610, 751, 1212, 1312, 1476, 1772, 1843, 2011
MfeI	CAATTG	1 cut(s)	1091
MflI	RGATCY	3 cut(s)	580, 610, 1843
MhlI	GDGCHC	3 cut(s)	169, 248, 1224
MlyI	GAGTC	7 cut(s)	26, 86, 190, 1140, 1805, 1835, 2035
MmeI	TCCRAC	2 cut(s)	1251, 1597
Mph1103I	ATGCAT	2 cut(s)	965, 1893
MslI	CAYNNNNRTG	1 cut(s)	906
MspA1I	CMGCKG	2 cut(s)	10, 1259
MspI	CCGG	2 cut(s)	906, 1646
MspR9I	CCNGG	6 cut(s)	112, 339, 906, 952, 1398, 1494
MunI	CAATTG	1 cut(s)	1091
Mva1269I	GAATGC	1 cut(s)	97
MvaI	CCWGG	5 cut(s)	112, 339, 952, 1398, 1494
MwoI	GCNNNNNNNGC	1 cut(s)	1120
NciI	CCSGG	1 cut(s)	906
NcoI	CCATGG	1 cut(s)	1705
NdeI	CATATG	1 cut(s)	972
NdeII	GATC	9 cut(s)	580, 610, 751, 1212, 1312, 1476, 1772, 1843, 2011
NlaIV	GGNNCC	4 cut(s)	582, 875, 957, 1250
NmuCI	GTSAC	4 cut(s)	220, 1055, 1599, 1883
NsiI	ATGCAT	2 cut(s)	965, 1893
NspI	RCATGY	1 cut(s)	1891
NspV	TTCGAA	1 cut(s)	103
PagI	TCATGA	1 cut(s)	2100
PasI	CCCWGGG	2 cut(s)	111, 951
PciSI	GCTCTTC	3 cut(s)	157, 253, 397
PcsI	WCGNNNNNNNCGW	5 cut(s)	51, 57, 60, 66, 1308
PctI	GAATGC	1 cut(s)	97
PflFI	GACNNNGTC	2 cut(s)	62, 65
PkrI	GCNGC	3 cut(s)	793, 1526, 2037
PleI	GAGTC	7 cut(s)	25, 85, 190, 1140, 1805, 1834, 2035
PpsI	GAGTC	7 cut(s)	25, 85, 190, 1140, 1805, 1834, 2035
PshBI	ATTAAT	3 cut(s)	642, 1347, 1989
Psp124BI	GAGCTC	1 cut(s)	1224
Psp6I	CCWGG	5 cut(s)	110, 337, 950, 1396, 1492
PspGI	CCWGG	5 cut(s)	110, 337, 950, 1396, 1492
PspN4I	GGNNCC	4 cut(s)	582, 875, 957, 1250
PspPI	GGNCC	1 cut(s)	471
PsrI	GAACNNNNNNTAC	2 cut(s)	1098, 1130
PsuI	RGATCY	3 cut(s)	580, 610, 1843
PsyI	GACNNNGTC	2 cut(s)	62, 65
PvuII	CAGCTG	1 cut(s)	1259
RsaI	GTAC	2 cut(s)	273, 1371
RsaNI	GTAC	2 cut(s)	272, 1370
RseI	CAYNNNNRTG	1 cut(s)	906
SacI	GAGCTC	1 cut(s)	1224
SapI	GCTCTTC	3 cut(s)	157, 253, 397
SatI	GCNGC	3 cut(s)	792, 1525, 2036
Sau3AI	GATC	9 cut(s)	580, 610, 751, 1212, 1312, 1476, 1772, 1843, 2011
Sau96I	GGNCC	1 cut(s)	471
ScaI	AGTACT	1 cut(s)	1371
SchI	GAGTC	7 cut(s)	26, 86, 190, 1140, 1805, 1835, 2035
ScrFI	CCNGG	6 cut(s)	112, 339, 906, 952, 1398, 1494
SduI	GDGCHC	3 cut(s)	169, 248, 1224
SfaNI	GCATC	6 cut(s)	226, 338, 577, 972, 1456, 1612
SfcI	CTRYAG	1 cut(s)	2070
SfuI	TTCGAA	1 cut(s)	103
SinI	GGWCC	1 cut(s)	471
SmiMI	CAYNNNNRTG	1 cut(s)	906
SmlI	CTYRAG	3 cut(s)	203, 623, 1365
SmoI	CTYRAG	3 cut(s)	203, 623, 1365
SsiI	CCGC	5 cut(s)	10, 31, 81, 348, 2035
SspMI	CTAG	5 cut(s)	399, 819, 1512, 1530, 1925
SstI	GAGCTC	1 cut(s)	1224
StyD4I	CCNGG	6 cut(s)	110, 337, 904, 950, 1396, 1492
StyI	CCWWGG	2 cut(s)	1705, 2054
TaaI	ACNGT	3 cut(s)	441, 515, 1330
TaiI	ACGT	3 cut(s)	66, 317, 1546
TaqI	TCGA	9 cut(s)	15, 45, 51, 69, 103, 234, 1311, 2000, 2077
TatI	WGTACW	2 cut(s)	271, 1369
TauI	GCSGC	1 cut(s)	2038
TscAI	CASTG	5 cut(s)	884, 1681, 1794, 1855, 1903
TseFI	GTSAC	4 cut(s)	220, 1055, 1599, 1883
TseI	GCWGC	2 cut(s)	791, 1524
Tsp45I	GTSAC	4 cut(s)	220, 1055, 1599, 1883
TspDTI	ATGAA	8 cut(s)	321, 628, 844, 1148, 1371, 1404, 1433, 1818
TspRI	CASTG	5 cut(s)	884, 1681, 1794, 1855, 1903
Tth111I	GACNNNGTC	2 cut(s)	62, 65
VpaK11BI	GGWCC	1 cut(s)	471
VspI	ATTAAT	3 cut(s)	642, 1347, 1989
XapI	RAATTY	6 cut(s)	98, 279, 394, 1129, 1196, 1440
XbaI	TCTAGA	2 cut(s)	398, 1529
XceI	RCATGY	1 cut(s)	1891
XmiI	GTMKAC	1 cut(s)	1650
XspI	CTAG	5 cut(s)	399, 819, 1512, 1530, 1925
ZraI	GACGTC	1 cut(s)	64
ZrmI	AGTACT	1 cut(s)	1371
Zsp2I	ATGCAT	2 cut(s)	965, 1893

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.