Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6B

Orthogroup ID

OG0014654

Physical Location & Seq

Genomic Coordinates Reverse (-)

31022128 .. 31029739

Gene Structure 7612 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6BG180900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2223 bp

ATGACTGAGCGGTTCGAGTCTCCAAGCAAGCGGTTCTCGGTGTTCGACTTCGACGAAGACGACGTCGTCGAGGTTGAGTCCGCCAAATCGAATGCCAAATTTCGAAAGCCCAGGGCTTCCATTCCTTCCAAGAAGAAGAAGAAGAAGAGCCCCATTACCAAGTACACGTTTCTCCAATGCTTTTCTAAAGGAGCAAAGACTCCACTCAAGGAAATTAGCAATGTCACAATAGAGGTCGATGCTTTGGGCTCTTCAAATCATCAAACTAAGCAAGTACATAAAATTCCAGATGATGAGGACAGGCTTCACATCATGTGCTCTTCGACAACTTTGATATCCAGTCCTTCAAAGAATGAAGCTACGTTAGAACAACAAGCATCAGAGCCAGGTTCTTGCGGATATGACAATGTTGAAACTAGTAATCTTCGTCTTGAATCAAAGAATTCTAGAAGAGCTGGAAAGAGAAACAAAAAATCAGGTTTGAAACAGTTGAGGTGTGCAGTTTATGACCCTCATTGGTCCAAAAGACAGGAAGAAAATAAATCATTAGATAGCAGATACGGTGATACATGGAACTTTAATTTTGATTCTGATAAGCCTTTTGAAGATGTTATCTATCCAAAAGGGGATCCTGATGCAGTTACTATAAGTAAGAGAGATCTTGAACTTCTTGAGCCAGAGACATTCATTAATGACACCATAATTGACTTCTATATTCTATACTTGAAAAGCAACATTCAACCTGAGGAAAAGCATAAGTTTCACTTCTTCAATAGTTTCTTCTTTCGGAAACTTGCTGATCTGGAGAAAGACCCATCAAGTTCCTGTGAACGCAAGGCAGCTTTTCAGCGTGTTCGGAAATGGACTAGGAAAGTGAATCTGTTTGAAAAGGATTACATCTTCATTCCTGTAAACCACAGGCTCCACTGGAGTTTGATTGTCATTTGTCATCCCGGTGAAGTGGCTAATTGTGAAGACGAGGGAATTGAAAGCTTACCCAGGGTGCCATGCATCTTGCATATGGATTCAATTAAAGGAAGCCACAGAGACCTGAAAAATCTTGTTCAAAGATACCTATGTGAAGAGTGGAAAGAGAGGCGTGGTGACACAGCAGAAGGTGATTCTTTGAGATTTTTACAATTGAGATTTCTTGAACTGGAGCTACCACAGCAGGAAAATTTATCTGATTGTGGACTCTTTTTGCTTCATTATGTGGAGCGTTTTCTGGCAGAAGCTCCTGTTAACTTTAGCCCTTTTAAGATCACAGAGCTCTCCAACTTTCTAAAGAAAAAGTGGTTCCCTCCAGCTGAGGCTTCTCTTAAACGCCATCAGATTAAGAAGTTGCTATACGATATCCTCGTTCAATCTCAGGAAACTGTTATAGCCGATTGCATTAATTTAGATGAATCCCCTCAAGTACTCAAAAATACAGACAATGAAGAACCTGGCATAAAGCATTTTTACGAAATGTCCAATTCAACACAAAAAAATCATGGGAATTGTTATAGTTCTGATGCACATGGGATCAGAATTACATCGCCAGGAGCTTGTTCTTCTCCTAGTCATGTATACTGCTCTAGAGAAAGGGGACGTGTTGCTGATAAGAATTATCTGCCGTTGACTGCCAATAATATGACGAGTTTTATGTCACCAATACAGGAAGTTGGAGATGCTGAGGAAATGACTGATTCGCCGGTCGACATTGAAGCTTGTCCGAAAGACACTGCATTACCTTCTGATATACTACCCAGGGATACATCTCAGAACCATGGGTTCTCAAAGAACATTGGAGATAATGCTGATGTGAACTTAATTTCTGATACATCTGGTAGTGGATCAGAGATTTTTTCAGTGGTAGGGATAGATGAAGATGACTCACTTGTGGAAGCTGAGGCGTTTAACTGTCCAAGGAAAACACAGAAATCTGAATCGTCTTCAAGTGGGGATCTCACTGCTTGTGTTGTGCAGGATTCTGAAGAGGAAAGTGACACGCATGGCACTGAGGTTATATGTATCTCATCCTCTCTAGCAAACCAACAATTCTTCCATCAACAAGCAGACTCTACTGGAAACAATAATCATAAAGAGATTAATATGCTATCGAGTAGTGAGGATCAAGCATCCGAATCAGATGAGCAGCAGACTCCAAAAAGACCAAGGCTCACACATCCTGTAGGTCGAAGAAGGCATACAAGAAGCCTCATGAGAGCGTTGCATTTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004175 GO:0004197 GO:0006464 GO:0006508 GO:0006807 GO:0008150 GO:0008152 GO:0008233 GO:0008234 GO:0009987 GO:0016787 GO:0016926 GO:0016929 GO:0018193 GO:0018205 GO:0019538 GO:0019783 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0070011 GO:0070137 GO:0070139 GO:0070646 GO:0070647 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Peptidase_C48

Protein Analysis

740

Amino Acids

84.13

Weight (kDa)

5.8

Isoelectric Point (pI)

55.03

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PH_ULP	PF25352	139 - 192	4.4e-12	Ubiquitin-like protease PH domain
Peptidase_C48	PF02902	229 - 427	3.1e-33	Ulp1 protease family, C-terminal catalytic domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0014654)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_2g11700 FvH4_2g11700
prunus_persica	Prupe.8G069500_v2.0.a1 Prupe.8G069500_v2.0.a1
pyrus_communis	pycom10g04120
rosa_chinensis	RchiOBHm_Chr6g0271021
rosa_laevigata	RLG00000013750 RLG00000013751 RLG00000013752
rosa_roxburghii	Rroxscaffold_7G00197420
rosa_rugosa	Rorug06G0057600 Rorug06G0057700
rosa_samantha	Rh6AG177600 Rh6BG180900 Rh6CG176900 Rh6DG169100
rosa_wichuraiana	Rw6G015140

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	65
AatII	GACGTC	1 cut(s)	66
AccB1I	GGYRCC	1 cut(s)	1003
AccBSI	CCGCTC	1 cut(s)	10
AccI	GTMKAC	2 cut(s)	1569, 1698
AciI	CCGC	4 cut(s)	10, 31, 81, 396
AclWI	GGATC	6 cut(s)	623, 636, 1532, 1843, 1953, 2121
AcsI	RAATTY	4 cut(s)	98, 282, 442, 1177
AcuI	CTGAAG	1 cut(s)	1995
AcyI	GRCGYC	1 cut(s)	63
AfaI	GTAC	3 cut(s)	164, 276, 1419
AflIII	ACRYGT	2 cut(s)	165, 1591
AhlI	ACTAGT	1 cut(s)	416
AjiI	CACGTC	1 cut(s)	1592
AjnI	CCWGG	6 cut(s)	110, 385, 998, 1444, 1540, 1748
Alw21I	GWGCWC	2 cut(s)	320, 1272
Alw26I	GTCTC	3 cut(s)	24, 674, 1041
AlwI	GGATC	6 cut(s)	623, 636, 1532, 1843, 1953, 2121
ApeKI	GCWGC	2 cut(s)	839, 2137
ApoI	RAATTY	4 cut(s)	98, 282, 442, 1177
ArsI	GACNNNNNNTTYG	2 cut(s)	48, 80
AseI	ATTAAT	3 cut(s)	690, 1395, 2091
AspS9I	GGNCC	1 cut(s)	519
AsuC2I	CCSGG	1 cut(s)	954
AsuHPI	GGTGA	5 cut(s)	575, 968, 1115, 1130, 1641
AsuII	TTCGAA	1 cut(s)	103
AvaII	GGWCC	1 cut(s)	519
AxyI	CCTNAGG	1 cut(s)	744
BaeI	ACNNNNGTAYC	2 cut(s)	1063, 1096
BamHI	GGATCC	1 cut(s)	628
BanI	GGYRCC	1 cut(s)	1003
BanII	GRGCYC	3 cut(s)	152, 251, 1272
BarI	GAAGNNNNNNTAC	4 cut(s)	1331, 1363, 2173, 2205
BbsI	GAAGAC	3 cut(s)	63, 981, 1926
Bbv12I	GWGCWC	2 cut(s)	320, 1272
BbvCI	CCTCAGC	3 cut(s)	1308, 1674, 1890
BbvI	GCAGC	2 cut(s)	851, 2149
BccI	CCATC	3 cut(s)	823, 1335, 2055
BceAI	ACGGC	1 cut(s)	1600
BciT130I	CCWGG	6 cut(s)	112, 387, 1000, 1446, 1542, 1750
BciVI	GTATCC	1 cut(s)	1747
BcnI	CCSGG	1 cut(s)	954
BcoDI	GTCTC	3 cut(s)	24, 674, 1041
BcuI	ACTAGT	1 cut(s)	416
BfaI	CTAG	6 cut(s)	417, 447, 867, 1560, 1578, 2027
BfmI	CTRYAG	1 cut(s)	2172
BfuI	GTATCC	1 cut(s)	1747
BglII	AGATCT	1 cut(s)	658
BisI	GCNGC	2 cut(s)	840, 2138
BlsI	GCNGC	2 cut(s)	841, 2139
BmcAI	AGTACT	1 cut(s)	1419
Bme1390I	CCNGG	7 cut(s)	112, 387, 954, 1000, 1446, 1542, 1750
Bme18I	GGWCC	1 cut(s)	519
BmgBI	CACGTC	1 cut(s)	1592
BmgT120I	GGNCC	1 cut(s)	519
BmiI	GGNNCC	4 cut(s)	630, 923, 1005, 1298
BmrFI	CCNGG	7 cut(s)	112, 387, 954, 1000, 1446, 1542, 1750
BmsI	GCATC	7 cut(s)	229, 386, 625, 1020, 1504, 1660, 2129
BpiI	GAAGAC	3 cut(s)	63, 981, 1926
BpmI	CTGGAG	4 cut(s)	824, 949, 1178, 1287
Bpu10I	CCTNAGC	3 cut(s)	1308, 1674, 1890
Bpu14I	TTCGAA	1 cut(s)	103
BpuEI	CTTGAG	3 cut(s)	191, 692, 1398
BpuMI	CCSGG	1 cut(s)	954
BsaHI	GRCGYC	1 cut(s)	63
BsaI	GGTCTC	1 cut(s)	1041
BsaJI	CCNNGG	9 cut(s)	110, 111, 998, 999, 1748, 1749, 1768, 1907, 2156
Bse118I	RCCGGY	1 cut(s)	1693
Bse1I	ACTGG	4 cut(s)	339, 932, 1161, 2071
Bse21I	CCTNAGG	1 cut(s)	744
Bse3DI	GCAATG	1 cut(s)	226
BseBI	CCWGG	6 cut(s)	112, 387, 1000, 1446, 1542, 1750
BseDI	CCNNGG	9 cut(s)	110, 111, 998, 999, 1748, 1749, 1768, 1907, 2156
BseGI	GGATG	4 cut(s)	949, 2018, 2120, 2167
BseMI	GCAATG	1 cut(s)	226
BseMII	CTCAG	7 cut(s)	735, 1299, 1382, 1665, 1775, 1881, 1992
BseNI	ACTGG	4 cut(s)	339, 932, 1161, 2071
BseXI	GCAGC	2 cut(s)	851, 2149
BsgI	GTGCAG	2 cut(s)	519, 1985
Bsh1285I	CGRYCG	1 cut(s)	1698
BshNI	GGYRCC	1 cut(s)	1003
BsiEI	CGRYCG	1 cut(s)	1698
BsiHKAI	GWGCWC	2 cut(s)	320, 1272
BsiSI	CCGG	2 cut(s)	954, 1694
BslFI	GGGAC	1 cut(s)	1602
BsmAI	GTCTC	3 cut(s)	24, 674, 1041
BsmFI	GGGAC	1 cut(s)	1602
BsmI	GAATGC	1 cut(s)	97
Bso31I	GGTCTC	1 cut(s)	1041
Bsp119I	TTCGAA	1 cut(s)	103
Bsp1286I	GDGCHC	4 cut(s)	152, 251, 320, 1272
Bsp143I	GATC	8 cut(s)	628, 658, 799, 1260, 1524, 1835, 1945, 2113
Bsp19I	CCATGG	1 cut(s)	1768
BspACI	CCGC	4 cut(s)	10, 31, 81, 396
BspCNI	CTCAG	7 cut(s)	736, 1300, 1381, 1666, 1774, 1882, 1993
BspHI	TCATGA	1 cut(s)	2202
BspLI	GGNNCC	4 cut(s)	630, 923, 1005, 1298
BspPI	GGATC	6 cut(s)	623, 636, 1532, 1843, 1953, 2121
BspQI	GCTCTTC	4 cut(s)	140, 256, 325, 445
BspT104I	TTCGAA	1 cut(s)	103
BspT107I	GGYRCC	1 cut(s)	1003
BspTNI	GGTCTC	1 cut(s)	1041
BsrBI	CCGCTC	1 cut(s)	10
BsrDI	GCAATG	1 cut(s)	226
BsrFI	RCCGGY	1 cut(s)	1693
BsrI	ACTGG	4 cut(s)	339, 932, 1161, 2071
BssAI	RCCGGY	1 cut(s)	1693
BssECI	CCNNGG	9 cut(s)	110, 111, 998, 999, 1748, 1749, 1768, 1907, 2156
BssMI	GATC	8 cut(s)	628, 658, 799, 1260, 1524, 1835, 1945, 2113
BssNAI	GTATAC	1 cut(s)	1570
BssNI	GRCGYC	1 cut(s)	63
BssT1I	CCWWGG	3 cut(s)	1768, 1907, 2156
Bst1107I	GTATAC	1 cut(s)	1570
Bst2UI	CCWGG	6 cut(s)	112, 387, 1000, 1446, 1542, 1750
Bst4CI	ACNGT	4 cut(s)	489, 563, 1378, 1904
Bst6I	CTCTTC	6 cut(s)	140, 256, 325, 445, 1077, 1971
BstACI	GRCGYC	1 cut(s)	63
BstBI	TTCGAA	1 cut(s)	103
BstC8I	GCNNGC	1 cut(s)	29
BstDEI	CTNAG	9 cut(s)	6, 267, 744, 1308, 1368, 1674, 1761, 1890, 2001
BstDSI	CCRYGG	1 cut(s)	1768
BstF5I	GGATG	4 cut(s)	949, 2018, 2120, 2167
BstKTI	GATC	8 cut(s)	631, 661, 802, 1263, 1527, 1838, 1948, 2116
BstMAI	GTCTC	3 cut(s)	24, 674, 1041
BstMBI	GATC	8 cut(s)	628, 658, 799, 1260, 1524, 1835, 1945, 2113
BstMCI	CGRYCG	1 cut(s)	1698
BstMWI	GCNNNNNNNGC	1 cut(s)	1168
BstNI	CCWGG	6 cut(s)	112, 387, 1000, 1446, 1542, 1750
BstSCI	CCNGG	7 cut(s)	110, 385, 952, 998, 1444, 1540, 1748
BstSFI	CTRYAG	1 cut(s)	2172
BstV1I	GCAGC	2 cut(s)	851, 2149
BstV2I	GAAGAC	3 cut(s)	63, 981, 1926
BstX2I	RGATCY	3 cut(s)	628, 658, 1945
BstYI	RGATCY	3 cut(s)	628, 658, 1945
BstZ17I	GTATAC	1 cut(s)	1570
Bsu36I	CCTNAGG	1 cut(s)	744
BsuI	GTATCC	1 cut(s)	1747
BtgI	CCRYGG	1 cut(s)	1768
BtgZI	GCGATG	1 cut(s)	1521
BtrI	CACGTC	1 cut(s)	1592
BtsCI	GGATG	4 cut(s)	949, 2018, 2120, 2167
BtsI	GCAGTG	2 cut(s)	1722, 1950
BtsIMutI	CAGTG	5 cut(s)	925, 1722, 1857, 1950, 1998
Cac8I	GCNNGC	1 cut(s)	29
CciI	TCATGA	1 cut(s)	2202
Cfr10I	RCCGGY	1 cut(s)	1693
Cfr13I	GGNCC	1 cut(s)	519
Csp6I	GTAC	3 cut(s)	163, 275, 1418
CviAII	CATG	9 cut(s)	313, 570, 1008, 1493, 1520, 1565, 1769, 1994, 2203
CviQI	GTAC	3 cut(s)	163, 275, 1418
DdeI	CTNAG	9 cut(s)	6, 267, 744, 1308, 1368, 1674, 1761, 1890, 2001
DpnI	GATC	8 cut(s)	630, 660, 801, 1262, 1526, 1837, 1947, 2115
DpnII	GATC	8 cut(s)	628, 658, 799, 1260, 1524, 1835, 1945, 2113
DrdI	GACNNNNNNGTC	1 cut(s)	65
DseDI	GACNNNNNNGTC	1 cut(s)	65
Eam1104I	CTCTTC	6 cut(s)	140, 256, 325, 445, 1077, 1971
EarI	CTCTTC	6 cut(s)	140, 256, 325, 445, 1077, 1971
EciI	GGCGGA	1 cut(s)	70
Ecl136II	GAGCTC	1 cut(s)	1270
Eco130I	CCWWGG	3 cut(s)	1768, 1907, 2156
Eco24I	GRGCYC	3 cut(s)	152, 251, 1272
Eco31I	GGTCTC	1 cut(s)	1041
Eco32I	GATATC	2 cut(s)	336, 1354
Eco47I	GGWCC	1 cut(s)	519
Eco53kI	GAGCTC	1 cut(s)	1270
Eco57I	CTGAAG	1 cut(s)	1995
Eco81I	CCTNAGG	1 cut(s)	744
EcoICRI	GAGCTC	1 cut(s)	1270
EcoRI	GAATTC	1 cut(s)	442
EcoRII	CCWGG	6 cut(s)	110, 385, 998, 1444, 1540, 1748
EcoRV	GATATC	2 cut(s)	336, 1354
EcoT14I	CCWWGG	3 cut(s)	1768, 1907, 2156
EcoT22I	ATGCAT	1 cut(s)	1013
EcoT38I	GRGCYC	3 cut(s)	152, 251, 1272
ErhI	CCWWGG	3 cut(s)	1768, 1907, 2156
FaeI	CATG	9 cut(s)	316, 573, 1011, 1496, 1523, 1568, 1772, 1997, 2206
FalI	AAGNNNNNCTT	2 cut(s)	749, 781
FaqI	GGGAC	1 cut(s)	1602
FatI	CATG	9 cut(s)	312, 569, 1007, 1492, 1519, 1564, 1768, 1993, 2202
FauNDI	CATATG	1 cut(s)	1020
FblI	GTMKAC	2 cut(s)	1569, 1698
Fnu4HI	GCNGC	2 cut(s)	840, 2138
FokI	GGATG	4 cut(s)	936, 2005, 2107, 2154
FriOI	GRGCYC	3 cut(s)	152, 251, 1272
Fsp4HI	GCNGC	2 cut(s)	840, 2138
FspBI	CTAG	6 cut(s)	417, 447, 867, 1560, 1578, 2027
GluI	GCNGC	2 cut(s)	840, 2138
GsuI	CTGGAG	4 cut(s)	824, 949, 1178, 1287
HapII	CCGG	2 cut(s)	954, 1694
Hin1I	GRCGYC	1 cut(s)	63
Hin1II	CATG	9 cut(s)	316, 573, 1011, 1496, 1523, 1568, 1772, 1997, 2206
HincII	GTYRAC	3 cut(s)	1243, 1620, 1699
HindII	GTYRAC	3 cut(s)	1243, 1620, 1699
HindIII	AAGCTT	2 cut(s)	991, 1707
HpaI	GTTAAC	1 cut(s)	1243
HpaII	CCGG	2 cut(s)	954, 1694
HphI	GGTGA	5 cut(s)	575, 968, 1115, 1130, 1641
Hpy166II	GTNNAC	9 cut(s)	165, 830, 913, 1193, 1243, 1570, 1620, 1699, 1807
Hpy8I	GTNNAC	9 cut(s)	165, 830, 913, 1193, 1243, 1570, 1620, 1699, 1807
Hpy99I	CGWCG	4 cut(s)	56, 65, 68, 71
HpyAV	CCTTC	5 cut(s)	135, 354, 1109, 1743, 2178
HpyCH4III	ACNGT	4 cut(s)	489, 563, 1378, 1904
HpyCH4IV	ACGT	4 cut(s)	63, 167, 362, 1591
HpyCH4V	TGCA	9 cut(s)	500, 638, 1011, 1018, 1392, 1517, 1727, 1966, 2215
HpyF10VI	GCNNNNNNNGC	1 cut(s)	1168
HpyF3I	CTNAG	9 cut(s)	6, 267, 744, 1308, 1368, 1674, 1761, 1890, 2001
HpySE526I	ACGT	4 cut(s)	63, 167, 362, 1591
Hsp92I	GRCGYC	1 cut(s)	63
Hsp92II	CATG	9 cut(s)	316, 573, 1011, 1496, 1523, 1568, 1772, 1997, 2206
KspAI	GTTAAC	1 cut(s)	1243
Kzo9I	GATC	8 cut(s)	628, 658, 799, 1260, 1524, 1835, 1945, 2113
LguI	GCTCTTC	4 cut(s)	140, 256, 325, 445
LmnI	GCTCC	6 cut(s)	191, 927, 1159, 1216, 1240, 1544
Lsp1109I	GCAGC	2 cut(s)	851, 2149
LweI	GCATC	7 cut(s)	229, 386, 625, 1020, 1504, 1660, 2129
MaeI	CTAG	6 cut(s)	417, 447, 867, 1560, 1578, 2027
MaeII	ACGT	4 cut(s)	63, 167, 362, 1591
MaeIII	GTNAC	5 cut(s)	223, 640, 1103, 1647, 1985
MalI	GATC	8 cut(s)	630, 660, 801, 1262, 1526, 1837, 1947, 2115
MbiI	CCGCTC	1 cut(s)	10
MboI	GATC	8 cut(s)	628, 658, 799, 1260, 1524, 1835, 1945, 2113
MfeI	CAATTG	1 cut(s)	1139
MflI	RGATCY	3 cut(s)	628, 658, 1945
MhlI	GDGCHC	4 cut(s)	152, 251, 320, 1272
MlyI	GAGTC	7 cut(s)	26, 86, 193, 1188, 1868, 2054, 2137
MmeI	TCCRAC	2 cut(s)	1299, 1645
Mph1103I	ATGCAT	1 cut(s)	1013
MslI	CAYNNNNRTG	1 cut(s)	954
MspA1I	CMGCKG	1 cut(s)	1307
MspI	CCGG	2 cut(s)	954, 1694
MspR9I	CCNGG	7 cut(s)	112, 387, 954, 1000, 1446, 1542, 1750
MunI	CAATTG	1 cut(s)	1139
Mva1269I	GAATGC	1 cut(s)	97
MvaI	CCWGG	6 cut(s)	112, 387, 1000, 1446, 1542, 1750
MwoI	GCNNNNNNNGC	1 cut(s)	1168
NciI	CCSGG	1 cut(s)	954
NcoI	CCATGG	1 cut(s)	1768
NdeI	CATATG	1 cut(s)	1020
NdeII	GATC	8 cut(s)	628, 658, 799, 1260, 1524, 1835, 1945, 2113
NlaIII	CATG	9 cut(s)	316, 573, 1011, 1496, 1523, 1568, 1772, 1997, 2206
NlaIV	GGNNCC	4 cut(s)	630, 923, 1005, 1298
NmuCI	GTSAC	4 cut(s)	223, 1103, 1647, 1985
NsiI	ATGCAT	1 cut(s)	1013
NspV	TTCGAA	1 cut(s)	103
PagI	TCATGA	1 cut(s)	2202
PasI	CCCWGGG	3 cut(s)	111, 999, 1749
PciSI	GCTCTTC	4 cut(s)	140, 256, 325, 445
PcsI	WCGNNNNNNNCGW	5 cut(s)	51, 57, 60, 66, 1356
PctI	GAATGC	1 cut(s)	97
PflFI	GACNNNGTC	2 cut(s)	62, 65
PkrI	GCNGC	2 cut(s)	841, 2139
PleI	GAGTC	7 cut(s)	25, 85, 193, 1188, 1868, 2054, 2137
PpsI	GAGTC	7 cut(s)	25, 85, 193, 1188, 1868, 2054, 2137
PshBI	ATTAAT	3 cut(s)	690, 1395, 2091
Psp124BI	GAGCTC	1 cut(s)	1272
Psp6I	CCWGG	6 cut(s)	110, 385, 998, 1444, 1540, 1748
PspGI	CCWGG	6 cut(s)	110, 385, 998, 1444, 1540, 1748
PspN4I	GGNNCC	4 cut(s)	630, 923, 1005, 1298
PspPI	GGNCC	1 cut(s)	519
PsrI	GAACNNNNNNTAC	2 cut(s)	1146, 1178
PsuI	RGATCY	3 cut(s)	628, 658, 1945
PsyI	GACNNNGTC	2 cut(s)	62, 65
PvuII	CAGCTG	1 cut(s)	1307
RsaI	GTAC	3 cut(s)	164, 276, 1419
RsaNI	GTAC	3 cut(s)	163, 275, 1418
RseI	CAYNNNNRTG	1 cut(s)	954
SacI	GAGCTC	1 cut(s)	1272
SalI	GTCGAC	1 cut(s)	1697
SapI	GCTCTTC	4 cut(s)	140, 256, 325, 445
SatI	GCNGC	2 cut(s)	840, 2138
Sau3AI	GATC	8 cut(s)	628, 658, 799, 1260, 1524, 1835, 1945, 2113
Sau96I	GGNCC	1 cut(s)	519
ScaI	AGTACT	1 cut(s)	1419
SchI	GAGTC	7 cut(s)	26, 86, 193, 1188, 1868, 2054, 2137
ScrFI	CCNGG	7 cut(s)	112, 387, 954, 1000, 1446, 1542, 1750
SduI	GDGCHC	4 cut(s)	152, 251, 320, 1272
SfaNI	GCATC	7 cut(s)	229, 386, 625, 1020, 1504, 1660, 2129
SfcI	CTRYAG	1 cut(s)	2172
SfuI	TTCGAA	1 cut(s)	103
SinI	GGWCC	1 cut(s)	519
SmiMI	CAYNNNNRTG	1 cut(s)	954
SmlI	CTYRAG	3 cut(s)	206, 671, 1413
SmoI	CTYRAG	3 cut(s)	206, 671, 1413
SpeI	ACTAGT	1 cut(s)	416
SsiI	CCGC	4 cut(s)	10, 31, 81, 396
SspMI	CTAG	6 cut(s)	417, 447, 867, 1560, 1578, 2027
SstI	GAGCTC	1 cut(s)	1272
StyD4I	CCNGG	7 cut(s)	110, 385, 952, 998, 1444, 1540, 1748
StyI	CCWWGG	3 cut(s)	1768, 1907, 2156
TaaI	ACNGT	4 cut(s)	489, 563, 1378, 1904
TaiI	ACGT	4 cut(s)	66, 170, 365, 1594
TatI	WGTACW	3 cut(s)	162, 274, 1417
TscAI	CASTG	5 cut(s)	932, 1729, 1857, 1957, 2005
TseFI	GTSAC	4 cut(s)	223, 1103, 1647, 1985
TseI	GCWGC	2 cut(s)	839, 2137
Tsp45I	GTSAC	4 cut(s)	223, 1103, 1647, 1985
TspDTI	ATGAA	7 cut(s)	369, 676, 892, 1196, 1419, 1452, 1881
TspRI	CASTG	5 cut(s)	932, 1729, 1857, 1957, 2005
Tth111I	GACNNNGTC	2 cut(s)	62, 65
VpaK11BI	GGWCC	1 cut(s)	519
VspI	ATTAAT	3 cut(s)	690, 1395, 2091
XapI	RAATTY	4 cut(s)	98, 282, 442, 1177
XbaI	TCTAGA	2 cut(s)	446, 1577
XmiI	GTMKAC	2 cut(s)	1569, 1698
XspI	CTAG	6 cut(s)	417, 447, 867, 1560, 1578, 2027
ZraI	GACGTC	1 cut(s)	64
ZrmI	AGTACT	1 cut(s)	1419
Zsp2I	ATGCAT	1 cut(s)	1013

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.