Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6A

Orthogroup ID

OG0014654

Physical Location & Seq

Genomic Coordinates Reverse (-)

28765248 .. 28773299

Gene Structure 8052 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6AG177600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2178 bp

ATGACTCAGCGGTTCGAGTCTCCAAGCAAGCGGTTCTCGGTGTTCGACTTCGACGAAGACGACGTCGTCGAGGTTGAGTCCGCCAAATCGAATGCCAAATTTCGAAAGCCCAGGGCTTCCATTCCTTCCGAGAAGAAGAAGAAGAAGAGCCCCATTACCAAGTACACGTTTCTCCAATGCTTTTCTAAAGGAGCAAAGACTCCACTCAAGGAAATTAGCAATGTCACAATAGAGGTCGATGCTTTGGGCTCTTCAAATCATCAAACTAAGCAAGTACATAAAATTCCAGATGATGAGGATAGGCTGAATGAAGCTACGTTAGAAGAACAAGCATCAGAGCCAGGTTCTTGCGGATATGACAATGTTGAAACTAGTAATCTTCGTCTTGAATCAAAGAATTCTAGAAGAGCTGGAAAGAGAAACAAAAAATCAGGTTTGAAACAGTTGAGGTGTGCAGTTTATGACCCTCATTGGTCCAAAAGACAGGAAGAAAAAAAATCATTAGATAGCAGATACGGTGATACATGGAACTTTAATTTTGATTCTGATAAGCCTTTTGAAGATGTTATCTATCCAAAAGGGGATCCTGATGCAGTTACTATAAGTAAGAGAGATCTTGAACTTCTTGAGCCAGAGACATTCATTAATGACACCATAATTGACTTCTATATTCTATACTTGAAAAGCAACATTCAACCTGAGGAAAAGCATAGGTTTCACTTCTTCAATAGTTTCTTCTTTCGGAAACTTGCTGATCTGGAGAAAGACCCATCAAGTTCCTGTGAATGCAAGGCAGCTTTTCAGCGTGTTCGGAAATGGACTAGGAAAGTGAATCTGTTTGAAAAGGATTACATCTTCATTCCTGTAAACCACAGGCTCCACTGGAGTTTGATTGTCATTTGTCATCCCGGTGAAGTGGCTAATTGTGAAGACAAGGGAATTGAAAGCTTACCCAGGGTGCCATGCATCTTGCATATGGATTCAATTAAAGGAAGCCACAGAGATCTGAAAAATCTTGTTCAAAGATACCTATGTGAAGAGTGGAAAGAGAGGCATGGTGACACAGCAGAAGGTGATTCTTTGAGATTTTTACAATTGAGATTTCTTGAACTGGAGCTACCACAGCAGGAAAATTTATCTGATTGTGGACTCTTTTTGCTTCATTATGTGGAGCGTTTTCTGGCAGAAGCTCCTGTTAACTTTAGCCCTTTTAAGATCACAGAGCTCTCCAACTTTCTAAAGAAAAAGTGGTTCCCTCCAGCTGAGGCTTCTTTTAAACGCCATCAGATTAAGAAGTTGCTATACGATATCCTCGATCAATCTCGGGAAACTGTTATAGCCGATTGCATTAATTTAGATGAATCCCCTCAAGTACTCAAAAATACAGACAATGAAGAACCTGGCATAAAGCATTTTTACGAAATGTCCAATTCAACACAAAAAAATCATGGGAATTGTTATAGTTCTGATGCAAATGGGATCAGAATTACATCGCCAGGAGCTTATTCTTCTCCTAGTCATGTATGCTGCTCTAGAGAAAGGGGACGTGTTGCTGATAAGAATTATCTGCCGTTGACTGCCAATAATATGACGAGTTTTATGTCACCAATACAGGAAGTTGGAGATGCTGAGGAAATGACTGATTCGCCGGTCGACATTGAAGCTTGTCCGAAAGACACTGCATTACCTTCTGATATACTACCCAGGGATACATCTCAGAACCATGGGTTCTTAAAGAACATTGGAGATAATGCTGATGTGAACTCAATTTCTGATACATCTGGTAGTGGATCAGAGATTTTTTCAGTGGTAGGGATAGATGAAGATGACTCACTTGTGGAAGCTGAGGCGTTTAACTGTCCAAGGAAAACACAGAAATCTGAATCGTCTTCAAGTGGGGATCTCACTGCTTGTGTTGTGCAGGATTCTGAAGAGGAAAGTGACATGCATGGCACTGAGGTTATATGTATCTCATCCTCTCTAGCAAACCAACAATTCTTCCATCAACAAGCAGACTCTACTGGAAACAATAATCATAAAGAGATTAATATGCTATCGAGTAGTGAGGATCAAGCATCCGAATCAGATGAGCAGCAGACTCCAAAAAGACCAAGGCTCACACATCCTGTAGGTCGAAGAAGGCATACAAGAAGCCTCATGAGAGCGTTGCATTTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004175 GO:0004197 GO:0006464 GO:0006508 GO:0006807 GO:0008150 GO:0008152 GO:0008233 GO:0008234 GO:0009987 GO:0016787 GO:0016926 GO:0016929 GO:0018193 GO:0018205 GO:0019538 GO:0019783 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0070011 GO:0070137 GO:0070139 GO:0070646 GO:0070647 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Peptidase_C48

Protein Analysis

725

Amino Acids

82.61

Weight (kDa)

5.68

Isoelectric Point (pI)

53.27

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PH_ULP	PF25352	124 - 177	4.9e-12	Ubiquitin-like protease PH domain
Peptidase_C48	PF02902	214 - 412	4.4e-33	Ulp1 protease family, C-terminal catalytic domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0014654)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_2g11700 FvH4_2g11700
prunus_persica	Prupe.8G069500_v2.0.a1 Prupe.8G069500_v2.0.a1
pyrus_communis	pycom10g04120
rosa_chinensis	RchiOBHm_Chr6g0271021
rosa_laevigata	RLG00000013750 RLG00000013751 RLG00000013752
rosa_roxburghii	Rroxscaffold_7G00197420
rosa_rugosa	Rorug06G0057600 Rorug06G0057700
rosa_samantha	Rh6AG177600 Rh6BG180900 Rh6CG176900 Rh6DG169100
rosa_wichuraiana	Rw6G015140

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	65
AatII	GACGTC	1 cut(s)	66
AccB1I	GGYRCC	1 cut(s)	958
AccI	GTMKAC	1 cut(s)	1653
AciI	CCGC	4 cut(s)	10, 31, 81, 351
AclWI	GGATC	6 cut(s)	578, 591, 1487, 1798, 1908, 2076
AcsI	RAATTY	4 cut(s)	98, 282, 397, 1132
AcuI	CTGAAG	1 cut(s)	1950
AcyI	GRCGYC	1 cut(s)	63
AfaI	GTAC	3 cut(s)	164, 276, 1374
AflIII	ACRYGT	2 cut(s)	165, 1546
AhlI	ACTAGT	1 cut(s)	371
AjiI	CACGTC	1 cut(s)	1547
AjnI	CCWGG	6 cut(s)	110, 340, 953, 1399, 1495, 1703
Alw21I	GWGCWC	1 cut(s)	1227
Alw26I	GTCTC	2 cut(s)	24, 629
AlwI	GGATC	6 cut(s)	578, 591, 1487, 1798, 1908, 2076
Ama87I	CYCGRG	1 cut(s)	1323
ApeKI	GCWGC	3 cut(s)	794, 1527, 2092
ApoI	RAATTY	4 cut(s)	98, 282, 397, 1132
ArsI	GACNNNNNNTTYG	2 cut(s)	48, 80
AseI	ATTAAT	3 cut(s)	645, 1350, 2046
AspS9I	GGNCC	1 cut(s)	474
AsuC2I	CCSGG	1 cut(s)	909
AsuHPI	GGTGA	5 cut(s)	530, 923, 1070, 1085, 1596
AsuII	TTCGAA	1 cut(s)	103
AvaI	CYCGRG	1 cut(s)	1323
AvaII	GGWCC	1 cut(s)	474
AxyI	CCTNAGG	1 cut(s)	699
BaeI	ACNNNNGTAYC	2 cut(s)	1018, 1051
BamHI	GGATCC	1 cut(s)	583
BanI	GGYRCC	1 cut(s)	958
BanII	GRGCYC	3 cut(s)	152, 251, 1227
BarI	GAAGNNNNNNTAC	4 cut(s)	1286, 1318, 2128, 2160
BbsI	GAAGAC	3 cut(s)	63, 936, 1881
Bbv12I	GWGCWC	1 cut(s)	1227
BbvCI	CCTCAGC	3 cut(s)	1263, 1629, 1845
BbvI	GCAGC	3 cut(s)	806, 1514, 2104
BccI	CCATC	3 cut(s)	778, 1290, 2010
BceAI	ACGGC	1 cut(s)	1555
BciT130I	CCWGG	6 cut(s)	112, 342, 955, 1401, 1497, 1705
BciVI	GTATCC	1 cut(s)	1702
BcnI	CCSGG	1 cut(s)	909
BcoDI	GTCTC	2 cut(s)	24, 629
BcuI	ACTAGT	1 cut(s)	371
BfaI	CTAG	6 cut(s)	372, 402, 822, 1515, 1533, 1982
BfmI	CTRYAG	1 cut(s)	2127
BfuI	GTATCC	1 cut(s)	1702
BglII	AGATCT	2 cut(s)	613, 1003
BisI	GCNGC	3 cut(s)	795, 1528, 2093
BlsI	GCNGC	3 cut(s)	796, 1529, 2094
BmcAI	AGTACT	1 cut(s)	1374
Bme1390I	CCNGG	7 cut(s)	112, 342, 909, 955, 1401, 1497, 1705
Bme18I	GGWCC	1 cut(s)	474
BmeT110I	CYCGRG	1 cut(s)	1323
BmgBI	CACGTC	1 cut(s)	1547
BmgT120I	GGNCC	1 cut(s)	474
BmiI	GGNNCC	4 cut(s)	585, 878, 960, 1253
BmrFI	CCNGG	7 cut(s)	112, 342, 909, 955, 1401, 1497, 1705
BmsI	GCATC	7 cut(s)	229, 341, 580, 975, 1459, 1615, 2084
BpiI	GAAGAC	3 cut(s)	63, 936, 1881
BpmI	CTGGAG	4 cut(s)	779, 904, 1133, 1242
Bpu10I	CCTNAGC	3 cut(s)	1263, 1629, 1845
Bpu14I	TTCGAA	1 cut(s)	103
BpuEI	CTTGAG	3 cut(s)	191, 647, 1353
BpuMI	CCSGG	1 cut(s)	909
BsaHI	GRCGYC	1 cut(s)	63
BsaJI	CCNNGG	9 cut(s)	110, 111, 953, 954, 1703, 1704, 1723, 1862, 2111
Bse118I	RCCGGY	1 cut(s)	1648
Bse1I	ACTGG	3 cut(s)	887, 1116, 2026
Bse21I	CCTNAGG	1 cut(s)	699
Bse3DI	GCAATG	1 cut(s)	226
BseBI	CCWGG	6 cut(s)	112, 342, 955, 1401, 1497, 1705
BseDI	CCNNGG	9 cut(s)	110, 111, 953, 954, 1703, 1704, 1723, 1862, 2111
BseGI	GGATG	4 cut(s)	904, 1973, 2075, 2122
BseMI	GCAATG	1 cut(s)	226
BseMII	CTCAG	7 cut(s)	20, 690, 1254, 1620, 1730, 1836, 1947
BseNI	ACTGG	3 cut(s)	887, 1116, 2026
BseXI	GCAGC	3 cut(s)	806, 1514, 2104
BsgI	GTGCAG	2 cut(s)	474, 1940
Bsh1285I	CGRYCG	1 cut(s)	1653
BshNI	GGYRCC	1 cut(s)	958
BsiEI	CGRYCG	1 cut(s)	1653
BsiHKAI	GWGCWC	1 cut(s)	1227
BsiHKCI	CYCGRG	1 cut(s)	1323
BsiSI	CCGG	2 cut(s)	909, 1649
BslFI	GGGAC	1 cut(s)	1557
BsmAI	GTCTC	2 cut(s)	24, 629
BsmFI	GGGAC	1 cut(s)	1557
BsmI	GAATGC	2 cut(s)	97, 791
BsoBI	CYCGRG	1 cut(s)	1323
Bsp119I	TTCGAA	1 cut(s)	103
Bsp1286I	GDGCHC	3 cut(s)	152, 251, 1227
Bsp19I	CCATGG	1 cut(s)	1723
BspACI	CCGC	4 cut(s)	10, 31, 81, 351
BspCNI	CTCAG	7 cut(s)	19, 691, 1255, 1621, 1729, 1837, 1948
BspHI	TCATGA	1 cut(s)	2157
BspLI	GGNNCC	4 cut(s)	585, 878, 960, 1253
BspPI	GGATC	6 cut(s)	578, 591, 1487, 1798, 1908, 2076
BspQI	GCTCTTC	3 cut(s)	140, 256, 400
BspT104I	TTCGAA	1 cut(s)	103
BspT107I	GGYRCC	1 cut(s)	958
BsrDI	GCAATG	1 cut(s)	226
BsrFI	RCCGGY	1 cut(s)	1648
BsrI	ACTGG	3 cut(s)	887, 1116, 2026
BssAI	RCCGGY	1 cut(s)	1648
BssECI	CCNNGG	9 cut(s)	110, 111, 953, 954, 1703, 1704, 1723, 1862, 2111
BssNI	GRCGYC	1 cut(s)	63
BssT1I	CCWWGG	3 cut(s)	1723, 1862, 2111
Bst2UI	CCWGG	6 cut(s)	112, 342, 955, 1401, 1497, 1705
Bst4CI	ACNGT	4 cut(s)	444, 518, 1333, 1859
Bst6I	CTCTTC	5 cut(s)	140, 256, 400, 1032, 1926
BstACI	GRCGYC	1 cut(s)	63
BstBI	TTCGAA	1 cut(s)	103
BstC8I	GCNNGC	1 cut(s)	29
BstDEI	CTNAG	8 cut(s)	6, 267, 699, 1263, 1629, 1716, 1845, 1956
BstDSI	CCRYGG	1 cut(s)	1723
BstF5I	GGATG	4 cut(s)	904, 1973, 2075, 2122
BstMAI	GTCTC	2 cut(s)	24, 629
BstMCI	CGRYCG	1 cut(s)	1653
BstMWI	GCNNNNNNNGC	1 cut(s)	1123
BstNI	CCWGG	6 cut(s)	112, 342, 955, 1401, 1497, 1705
BstNSI	RCATGY	1 cut(s)	1948
BstSCI	CCNGG	7 cut(s)	110, 340, 907, 953, 1399, 1495, 1703
BstSFI	CTRYAG	1 cut(s)	2127
BstV1I	GCAGC	3 cut(s)	806, 1514, 2104
BstV2I	GAAGAC	3 cut(s)	63, 936, 1881
BstX2I	RGATCY	4 cut(s)	583, 613, 1003, 1900
BstYI	RGATCY	4 cut(s)	583, 613, 1003, 1900
Bsu36I	CCTNAGG	1 cut(s)	699
BsuI	GTATCC	1 cut(s)	1702
BtgI	CCRYGG	1 cut(s)	1723
BtgZI	GCGATG	1 cut(s)	1476
BtrI	CACGTC	1 cut(s)	1547
BtsCI	GGATG	4 cut(s)	904, 1973, 2075, 2122
BtsI	GCAGTG	2 cut(s)	1677, 1905
BtsIMutI	CAGTG	5 cut(s)	880, 1677, 1812, 1905, 1953
Cac8I	GCNNGC	1 cut(s)	29
CciI	TCATGA	1 cut(s)	2157
Cfr10I	RCCGGY	1 cut(s)	1648
Cfr13I	GGNCC	1 cut(s)	474
Csp6I	GTAC	3 cut(s)	163, 275, 1373
CviAII	CATG	9 cut(s)	525, 963, 1055, 1448, 1520, 1724, 1945, 1949, 2158
CviQI	GTAC	3 cut(s)	163, 275, 1373
DdeI	CTNAG	8 cut(s)	6, 267, 699, 1263, 1629, 1716, 1845, 1956
DraI	TTTAAA	1 cut(s)	1276
DrdI	GACNNNNNNGTC	1 cut(s)	65
DseDI	GACNNNNNNGTC	1 cut(s)	65
Eam1104I	CTCTTC	5 cut(s)	140, 256, 400, 1032, 1926
EarI	CTCTTC	5 cut(s)	140, 256, 400, 1032, 1926
EciI	GGCGGA	1 cut(s)	70
Ecl136II	GAGCTC	1 cut(s)	1225
Eco130I	CCWWGG	3 cut(s)	1723, 1862, 2111
Eco24I	GRGCYC	3 cut(s)	152, 251, 1227
Eco32I	GATATC	1 cut(s)	1309
Eco47I	GGWCC	1 cut(s)	474
Eco53kI	GAGCTC	1 cut(s)	1225
Eco57I	CTGAAG	1 cut(s)	1950
Eco81I	CCTNAGG	1 cut(s)	699
Eco88I	CYCGRG	1 cut(s)	1323
EcoICRI	GAGCTC	1 cut(s)	1225
EcoRI	GAATTC	1 cut(s)	397
EcoRII	CCWGG	6 cut(s)	110, 340, 953, 1399, 1495, 1703
EcoRV	GATATC	1 cut(s)	1309
EcoT14I	CCWWGG	3 cut(s)	1723, 1862, 2111
EcoT22I	ATGCAT	2 cut(s)	968, 1950
EcoT38I	GRGCYC	3 cut(s)	152, 251, 1227
ErhI	CCWWGG	3 cut(s)	1723, 1862, 2111
FaeI	CATG	9 cut(s)	528, 966, 1058, 1451, 1523, 1727, 1948, 1952, 2161
FaqI	GGGAC	1 cut(s)	1557
FatI	CATG	9 cut(s)	524, 962, 1054, 1447, 1519, 1723, 1944, 1948, 2157
FauNDI	CATATG	1 cut(s)	975
FblI	GTMKAC	1 cut(s)	1653
Fnu4HI	GCNGC	3 cut(s)	795, 1528, 2093
FokI	GGATG	4 cut(s)	891, 1960, 2062, 2109
FriOI	GRGCYC	3 cut(s)	152, 251, 1227
Fsp4HI	GCNGC	3 cut(s)	795, 1528, 2093
FspBI	CTAG	6 cut(s)	372, 402, 822, 1515, 1533, 1982
GluI	GCNGC	3 cut(s)	795, 1528, 2093
GsuI	CTGGAG	4 cut(s)	779, 904, 1133, 1242
HapII	CCGG	2 cut(s)	909, 1649
Hin1I	GRCGYC	1 cut(s)	63
Hin1II	CATG	9 cut(s)	528, 966, 1058, 1451, 1523, 1727, 1948, 1952, 2161
HincII	GTYRAC	3 cut(s)	1198, 1575, 1654
HindII	GTYRAC	3 cut(s)	1198, 1575, 1654
HindIII	AAGCTT	2 cut(s)	946, 1662
HpaI	GTTAAC	1 cut(s)	1198
HpaII	CCGG	2 cut(s)	909, 1649
HphI	GGTGA	5 cut(s)	530, 923, 1070, 1085, 1596
Hpy166II	GTNNAC	7 cut(s)	165, 868, 1148, 1198, 1575, 1654, 1762
Hpy8I	GTNNAC	7 cut(s)	165, 868, 1148, 1198, 1575, 1654, 1762
Hpy99I	CGWCG	4 cut(s)	56, 65, 68, 71
HpyAV	CCTTC	4 cut(s)	135, 1064, 1698, 2133
HpyCH4III	ACNGT	4 cut(s)	444, 518, 1333, 1859
HpyCH4IV	ACGT	4 cut(s)	63, 167, 317, 1546
HpyF10VI	GCNNNNNNNGC	1 cut(s)	1123
HpyF3I	CTNAG	8 cut(s)	6, 267, 699, 1263, 1629, 1716, 1845, 1956
HpySE526I	ACGT	4 cut(s)	63, 167, 317, 1546
Hsp92I	GRCGYC	1 cut(s)	63
Hsp92II	CATG	9 cut(s)	528, 966, 1058, 1451, 1523, 1727, 1948, 1952, 2161
KspAI	GTTAAC	1 cut(s)	1198
LguI	GCTCTTC	3 cut(s)	140, 256, 400
LmnI	GCTCC	6 cut(s)	191, 882, 1114, 1171, 1195, 1499
Lsp1109I	GCAGC	3 cut(s)	806, 1514, 2104
LweI	GCATC	7 cut(s)	229, 341, 580, 975, 1459, 1615, 2084
MaeI	CTAG	6 cut(s)	372, 402, 822, 1515, 1533, 1982
MaeII	ACGT	4 cut(s)	63, 167, 317, 1546
MaeIII	GTNAC	5 cut(s)	223, 595, 1058, 1602, 1940
MfeI	CAATTG	1 cut(s)	1094
MflI	RGATCY	4 cut(s)	583, 613, 1003, 1900
MhlI	GDGCHC	3 cut(s)	152, 251, 1227
MlyI	GAGTC	7 cut(s)	26, 86, 193, 1143, 1823, 2009, 2092
MmeI	TCCRAC	2 cut(s)	1254, 1600
Mph1103I	ATGCAT	2 cut(s)	968, 1950
MslI	CAYNNNNRTG	1 cut(s)	909
MspA1I	CMGCKG	2 cut(s)	10, 1262
MspI	CCGG	2 cut(s)	909, 1649
MspR9I	CCNGG	7 cut(s)	112, 342, 909, 955, 1401, 1497, 1705
MunI	CAATTG	1 cut(s)	1094
Mva1269I	GAATGC	2 cut(s)	97, 791
MvaI	CCWGG	6 cut(s)	112, 342, 955, 1401, 1497, 1705
MwoI	GCNNNNNNNGC	1 cut(s)	1123
NciI	CCSGG	1 cut(s)	909
NcoI	CCATGG	1 cut(s)	1723
NdeI	CATATG	1 cut(s)	975
NlaIII	CATG	9 cut(s)	528, 966, 1058, 1451, 1523, 1727, 1948, 1952, 2161
NlaIV	GGNNCC	4 cut(s)	585, 878, 960, 1253
NmuCI	GTSAC	4 cut(s)	223, 1058, 1602, 1940
NsiI	ATGCAT	2 cut(s)	968, 1950
NspI	RCATGY	1 cut(s)	1948
NspV	TTCGAA	1 cut(s)	103
PagI	TCATGA	1 cut(s)	2157
PasI	CCCWGGG	3 cut(s)	111, 954, 1704
PciSI	GCTCTTC	3 cut(s)	140, 256, 400
PcsI	WCGNNNNNNNCGW	5 cut(s)	51, 57, 60, 66, 1311
PctI	GAATGC	2 cut(s)	97, 791
PflFI	GACNNNGTC	2 cut(s)	62, 65
PkrI	GCNGC	3 cut(s)	796, 1529, 2094
PleI	GAGTC	7 cut(s)	25, 85, 193, 1143, 1823, 2009, 2092
PpsI	GAGTC	7 cut(s)	25, 85, 193, 1143, 1823, 2009, 2092
PshBI	ATTAAT	3 cut(s)	645, 1350, 2046
Psp124BI	GAGCTC	1 cut(s)	1227
Psp6I	CCWGG	6 cut(s)	110, 340, 953, 1399, 1495, 1703
PspGI	CCWGG	6 cut(s)	110, 340, 953, 1399, 1495, 1703
PspN4I	GGNNCC	4 cut(s)	585, 878, 960, 1253
PspPI	GGNCC	1 cut(s)	474
PsrI	GAACNNNNNNTAC	2 cut(s)	1101, 1133
PsuI	RGATCY	4 cut(s)	583, 613, 1003, 1900
PsyI	GACNNNGTC	2 cut(s)	62, 65
PvuII	CAGCTG	1 cut(s)	1262
RsaI	GTAC	3 cut(s)	164, 276, 1374
RsaNI	GTAC	3 cut(s)	163, 275, 1373
RseI	CAYNNNNRTG	1 cut(s)	909
SacI	GAGCTC	1 cut(s)	1227
SalI	GTCGAC	1 cut(s)	1652
SapI	GCTCTTC	3 cut(s)	140, 256, 400
SatI	GCNGC	3 cut(s)	795, 1528, 2093
Sau96I	GGNCC	1 cut(s)	474
ScaI	AGTACT	1 cut(s)	1374
SchI	GAGTC	7 cut(s)	26, 86, 193, 1143, 1823, 2009, 2092
ScrFI	CCNGG	7 cut(s)	112, 342, 909, 955, 1401, 1497, 1705
SduI	GDGCHC	3 cut(s)	152, 251, 1227
SfaNI	GCATC	7 cut(s)	229, 341, 580, 975, 1459, 1615, 2084
SfcI	CTRYAG	1 cut(s)	2127
SfuI	TTCGAA	1 cut(s)	103
SinI	GGWCC	1 cut(s)	474
SmiMI	CAYNNNNRTG	1 cut(s)	909
SmlI	CTYRAG	3 cut(s)	206, 626, 1368
SmoI	CTYRAG	3 cut(s)	206, 626, 1368
SpeI	ACTAGT	1 cut(s)	371
SsiI	CCGC	4 cut(s)	10, 31, 81, 351
SspMI	CTAG	6 cut(s)	372, 402, 822, 1515, 1533, 1982
SstI	GAGCTC	1 cut(s)	1227
StyD4I	CCNGG	7 cut(s)	110, 340, 907, 953, 1399, 1495, 1703
StyI	CCWWGG	3 cut(s)	1723, 1862, 2111
TaaI	ACNGT	4 cut(s)	444, 518, 1333, 1859
TaiI	ACGT	4 cut(s)	66, 170, 320, 1549
TatI	WGTACW	3 cut(s)	162, 274, 1372
TscAI	CASTG	5 cut(s)	887, 1684, 1812, 1912, 1960
TseFI	GTSAC	4 cut(s)	223, 1058, 1602, 1940
TseI	GCWGC	3 cut(s)	794, 1527, 2092
Tsp45I	GTSAC	4 cut(s)	223, 1058, 1602, 1940
TspDTI	ATGAA	7 cut(s)	324, 631, 847, 1151, 1374, 1407, 1836
TspRI	CASTG	5 cut(s)	887, 1684, 1812, 1912, 1960
Tth111I	GACNNNGTC	2 cut(s)	62, 65
VpaK11BI	GGWCC	1 cut(s)	474
VspI	ATTAAT	3 cut(s)	645, 1350, 2046
XapI	RAATTY	4 cut(s)	98, 282, 397, 1132
XbaI	TCTAGA	2 cut(s)	401, 1532
XceI	RCATGY	1 cut(s)	1948
XmiI	GTMKAC	1 cut(s)	1653
XspI	CTAG	6 cut(s)	372, 402, 822, 1515, 1533, 1982
ZraI	GACGTC	1 cut(s)	64
ZrmI	AGTACT	1 cut(s)	1374
Zsp2I	ATGCAT	2 cut(s)	968, 1950

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.