Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6C

Orthogroup ID

OG0014654

Physical Location & Seq

Genomic Coordinates Reverse (-)

25002401 .. 25010846

Gene Structure 8446 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6CG176900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2229 bp

ATGACTCAGCGGTTTGAGTCTCCAAGCAAGCGGTTCTCGGTGTTCGACTTCGACGAAGACGACGTCGTCGAGGTTGAGTCCGCCAAATCGAATGCCAAATTTCGAAAGCCCAGGGCTTCCATTCCTTCCAAGAAGAACAAGAAGAAGAGCCCCATTACCAAGTACACGTTTCTCCAATGCTTTTCTAAAGGAGCAAAGACTCCACTCAAGGAAATTAGCAATGTCACAATAGAGGTCGATGCTTTGGGCTCTTCAAATCATCAAACTAAGCAAGTACATAAAATTCCAGATGATGAGGATAGGCTTCACATCATTTGCTCTTCGACAACTTTGATATCCAGTCCTTCAAAGAATGAAGCTACGTTAGAAGAACAAGCATCAGAGCCAGGTTCTTGCGGATATGACAATGTTGAAACTGCTTTAGGTAATCTTCGTCTTGAATCAAAGAATTCTAGAAGAGCTGGAAAGAGAAACAAAAAATCAGGTTTGAAACAGTTGAGGTGTGCAGCTTATGATCCTCATTGGTCCAAAAGACAGGAACAAAATAAATCATTAGATAGCAGATACGGTGACACATGGAACTTTAATTTTGATTCTGATAAGCCTTTTGAAGATGTTATCTATCCAAAAGGGGATCCTGATGCAGTTACTATAAGTAAGAGAGATCTTGAACTTCTTGAGCCAGAGACATTCATTAATGACACCATAATTGACTTCTATATTCTATACTTGAAAAGCAACATTCAACCTGAGGAAAAGCATAGGTTTCACTTCTTCAATAGTTTCTTCTTTCGGAAACTTGCTGATCTGGAGAAAGACCCATCAAGTTCCTGTGAACGCAAGGCAGCTTTTCAGCGTGTTCGGAAATGGACTAGGAAAGTGAATCTGTTTGAAAAGGATTACATCTTCATTCCTGTAAACCACAGGCTCCACTGGAGTTTGATTGTCATTTGTCATCCCGGTGAAGTGGCTAATTGTGAAGACGAGGGAATTGAAAGCTTACCCAGGGTGCCATGCATCTTGCATATGGATTCAATTAAAGGAAGCCACAGAGACCTGAAAAATCTTGTTCAAAGATACCTATGTGAAGAGTGGAAAGAGAGGCATGGTGACACAGCAGAAGGTGATTCTTTGAGATTTTTACAATTGAGATTTCTTGAACTGGAGCTACCACAGCAGGAAAATTTATCTGATTGTGGACTCTTTTTGCTTCATTATGTGGAGCGTTTTCTGGCAGAAGCTCCTGTTAACTTTAGCCCTTTTAAGATCACAGAGCTCTCCAACTTTCTAAAGAAAAAGTGGTTTCCTCCTGCTGAGGCTTCTCTTAAACGCCATCAGATTAAGAAGTTGCTATACGATATTCTCGATCAATCTCGGGAAGCGGTTATAGCCGATTGTATTAATTTAGATGAATCCCCTCAAGTACTCAAAAATACAGACAATGAAGAACCTGGCATAAAGCATTTTTACGAAATGTCCAATTCAACACAAAAAATTCATGGGGATTGTTATAGTTCTGATGCACATGGGATCAGAATTACATCGCCAGGAGCTTATTCTTCTCCTAGTCATGTATGCTGCTCTAGAGAAAGGGGACGTGTTGCTGATAAGAATTATCTGCCGTTGACTGCCAATAATAAGACGAGTTTTATGTCACCAATACAGGAAGTTGGAGATTCTGAGGAAATGACTGATTCGCCAGTCGACATTGAAGCTTGTCCGAAAGACAGTGCATTACCTTCTGATATACTACCCAGGGATACATCTCAGAACCATGGGTTCTCAAAGAACATTGGAGATAATGCTGATGTGAACTCAATTTCTGATACATCTGGTAGTGGATCAGAGATTTTTTCAGTGGTAGGGATAGATGAAGATGACTCACTTGTGGAAGCTGAGGCGTTTAACTGTCCAAGGAAAACAGAGAAATCTGAATCGTCTTCAAGTGGGGATCTCACTGCTTGTGTTGTGCAGGATTCTGAAGAGGAAAGTGACATGCATGGCACTGAGGTTATATGTATCTCATCCTCTCTAGCAAACCAACAATTCTTCCATCAACAAGCAGACTCTACTGGAAACAATAATCATAAAGAGATTAATATGCTATCGAGTAGTGAGGATCAAGCATCCGAATCAGATGAGCGGCAGACTCCAAAAAGACCAAGGCTCACACATCCTGTAGGTCGAAGAAGGCATACAAGAAGCCTCATGAGAGCGTTGCATTTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004175 GO:0004197 GO:0006464 GO:0006508 GO:0006807 GO:0008150 GO:0008152 GO:0008233 GO:0008234 GO:0009987 GO:0016787 GO:0016926 GO:0016929 GO:0018193 GO:0018205 GO:0019538 GO:0019783 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0070011 GO:0070137 GO:0070139 GO:0070646 GO:0070647 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Peptidase_C48

Protein Analysis

742

Amino Acids

84.28

Weight (kDa)

5.78

Isoelectric Point (pI)

55.86

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PH_ULP	PF25352	133 - 194	2.4e-13	Ubiquitin-like protease PH domain
Peptidase_C48	PF02902	231 - 429	2.1e-33	Ulp1 protease family, C-terminal catalytic domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0014654)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_2g11700 FvH4_2g11700
prunus_persica	Prupe.8G069500_v2.0.a1 Prupe.8G069500_v2.0.a1
pyrus_communis	pycom10g04120
rosa_chinensis	RchiOBHm_Chr6g0271021
rosa_laevigata	RLG00000013750 RLG00000013751 RLG00000013752
rosa_roxburghii	Rroxscaffold_7G00197420
rosa_rugosa	Rorug06G0057600 Rorug06G0057700
rosa_samantha	Rh6AG177600 Rh6BG180900 Rh6CG176900 Rh6DG169100
rosa_wichuraiana	Rw6G015140

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	65
AatII	GACGTC	1 cut(s)	66
AccB1I	GGYRCC	1 cut(s)	1009
AccBSI	CCGCTC	1 cut(s)	2143
AccI	GTMKAC	1 cut(s)	1704
AciI	CCGC	6 cut(s)	10, 31, 81, 396, 1382, 2143
AclWI	GGATC	7 cut(s)	509, 629, 642, 1538, 1849, 1959, 2127
AcsI	RAATTY	5 cut(s)	98, 282, 448, 1183, 1494
AcuI	CTGAAG	1 cut(s)	2001
AcyI	GRCGYC	1 cut(s)	63
AfaI	GTAC	3 cut(s)	164, 276, 1425
AflIII	ACRYGT	2 cut(s)	165, 1597
AjiI	CACGTC	1 cut(s)	1598
AjnI	CCWGG	6 cut(s)	110, 385, 1004, 1450, 1546, 1754
Alw21I	GWGCWC	1 cut(s)	1278
Alw26I	GTCTC	3 cut(s)	24, 680, 1047
AlwI	GGATC	7 cut(s)	509, 629, 642, 1538, 1849, 1959, 2127
Ama87I	CYCGRG	1 cut(s)	1374
ApeKI	GCWGC	3 cut(s)	506, 845, 1578
ApoI	RAATTY	5 cut(s)	98, 282, 448, 1183, 1494
ArsI	GACNNNNNNTTYG	2 cut(s)	48, 80
AseI	ATTAAT	3 cut(s)	696, 1401, 2097
AspS9I	GGNCC	1 cut(s)	525
AsuC2I	CCSGG	1 cut(s)	960
AsuHPI	GGTGA	5 cut(s)	581, 974, 1121, 1136, 1647
AsuII	TTCGAA	1 cut(s)	103
AvaI	CYCGRG	1 cut(s)	1374
AvaII	GGWCC	1 cut(s)	525
AxyI	CCTNAGG	1 cut(s)	750
BaeI	ACNNNNGTAYC	2 cut(s)	1069, 1102
BamHI	GGATCC	1 cut(s)	634
BanI	GGYRCC	1 cut(s)	1009
BanII	GRGCYC	3 cut(s)	152, 251, 1278
BarI	GAAGNNNNNNTAC	4 cut(s)	1337, 1369, 2179, 2211
BbsI	GAAGAC	3 cut(s)	63, 987, 1932
Bbv12I	GWGCWC	1 cut(s)	1278
BbvCI	CCTCAGC	2 cut(s)	1314, 1896
BbvI	GCAGC	3 cut(s)	518, 857, 1565
BccI	CCATC	3 cut(s)	829, 1341, 2061
BceAI	ACGGC	1 cut(s)	1606
BciT130I	CCWGG	6 cut(s)	112, 387, 1006, 1452, 1548, 1756
BciVI	GTATCC	1 cut(s)	1753
BcnI	CCSGG	1 cut(s)	960
BcoDI	GTCTC	3 cut(s)	24, 680, 1047
BfaI	CTAG	5 cut(s)	453, 873, 1566, 1584, 2033
BfmI	CTRYAG	1 cut(s)	2178
BfuI	GTATCC	1 cut(s)	1753
BglII	AGATCT	1 cut(s)	664
BisI	GCNGC	4 cut(s)	507, 846, 1579, 2144
BlsI	GCNGC	4 cut(s)	508, 847, 1580, 2145
BmcAI	AGTACT	1 cut(s)	1425
Bme1390I	CCNGG	7 cut(s)	112, 387, 960, 1006, 1452, 1548, 1756
Bme18I	GGWCC	1 cut(s)	525
BmeT110I	CYCGRG	1 cut(s)	1374
BmgBI	CACGTC	1 cut(s)	1598
BmgT120I	GGNCC	1 cut(s)	525
BmiI	GGNNCC	3 cut(s)	636, 929, 1011
BmrFI	CCNGG	7 cut(s)	112, 387, 960, 1006, 1452, 1548, 1756
BmsI	GCATC	6 cut(s)	229, 386, 631, 1026, 1510, 2135
BpiI	GAAGAC	3 cut(s)	63, 987, 1932
BpmI	CTGGAG	3 cut(s)	830, 955, 1184
Bpu10I	CCTNAGC	2 cut(s)	1314, 1896
Bpu14I	TTCGAA	1 cut(s)	103
BpuEI	CTTGAG	3 cut(s)	191, 698, 1404
BpuMI	CCSGG	1 cut(s)	960
BsaHI	GRCGYC	1 cut(s)	63
BsaI	GGTCTC	1 cut(s)	1047
BsaJI	CCNNGG	9 cut(s)	110, 111, 1004, 1005, 1754, 1755, 1774, 1913, 2162
Bse1I	ACTGG	5 cut(s)	339, 938, 1167, 1700, 2077
Bse21I	CCTNAGG	1 cut(s)	750
Bse3DI	GCAATG	1 cut(s)	226
BseBI	CCWGG	6 cut(s)	112, 387, 1006, 1452, 1548, 1756
BseDI	CCNNGG	9 cut(s)	110, 111, 1004, 1005, 1754, 1755, 1774, 1913, 2162
BseGI	GGATG	4 cut(s)	955, 2024, 2126, 2173
BseMI	GCAATG	1 cut(s)	226
BseMII	CTCAG	7 cut(s)	20, 741, 1305, 1671, 1781, 1887, 1998
BseNI	ACTGG	5 cut(s)	339, 938, 1167, 1700, 2077
BseXI	GCAGC	3 cut(s)	518, 857, 1565
BsgI	GTGCAG	2 cut(s)	525, 1991
BshNI	GGYRCC	1 cut(s)	1009
BsiHKAI	GWGCWC	1 cut(s)	1278
BsiHKCI	CYCGRG	1 cut(s)	1374
BsiSI	CCGG	1 cut(s)	960
BslFI	GGGAC	1 cut(s)	1608
BsmAI	GTCTC	3 cut(s)	24, 680, 1047
BsmFI	GGGAC	1 cut(s)	1608
BsmI	GAATGC	1 cut(s)	97
Bso31I	GGTCTC	1 cut(s)	1047
BsoBI	CYCGRG	1 cut(s)	1374
Bsp119I	TTCGAA	1 cut(s)	103
Bsp1286I	GDGCHC	3 cut(s)	152, 251, 1278
Bsp19I	CCATGG	1 cut(s)	1774
BspACI	CCGC	6 cut(s)	10, 31, 81, 396, 1382, 2143
BspCNI	CTCAG	7 cut(s)	19, 742, 1306, 1672, 1780, 1888, 1999
BspHI	TCATGA	1 cut(s)	2208
BspLI	GGNNCC	3 cut(s)	636, 929, 1011
BspPI	GGATC	7 cut(s)	509, 629, 642, 1538, 1849, 1959, 2127
BspQI	GCTCTTC	4 cut(s)	140, 256, 325, 451
BspT104I	TTCGAA	1 cut(s)	103
BspT107I	GGYRCC	1 cut(s)	1009
BspTNI	GGTCTC	1 cut(s)	1047
BsrBI	CCGCTC	1 cut(s)	2143
BsrDI	GCAATG	1 cut(s)	226
BsrI	ACTGG	5 cut(s)	339, 938, 1167, 1700, 2077
BssECI	CCNNGG	9 cut(s)	110, 111, 1004, 1005, 1754, 1755, 1774, 1913, 2162
BssNI	GRCGYC	1 cut(s)	63
BssT1I	CCWWGG	3 cut(s)	1774, 1913, 2162
Bst2UI	CCWGG	6 cut(s)	112, 387, 1006, 1452, 1548, 1756
Bst4CI	ACNGT	4 cut(s)	495, 569, 1730, 1910
Bst6I	CTCTTC	6 cut(s)	140, 256, 325, 451, 1083, 1977
BstACI	GRCGYC	1 cut(s)	63
BstBI	TTCGAA	1 cut(s)	103
BstC8I	GCNNGC	1 cut(s)	29
BstDEI	CTNAG	8 cut(s)	6, 267, 750, 1314, 1680, 1767, 1896, 2007
BstDSI	CCRYGG	1 cut(s)	1774
BstF5I	GGATG	4 cut(s)	955, 2024, 2126, 2173
BstMAI	GTCTC	3 cut(s)	24, 680, 1047
BstMWI	GCNNNNNNNGC	2 cut(s)	1174, 1388
BstNI	CCWGG	6 cut(s)	112, 387, 1006, 1452, 1548, 1756
BstNSI	RCATGY	1 cut(s)	1999
BstSCI	CCNGG	7 cut(s)	110, 385, 958, 1004, 1450, 1546, 1754
BstSFI	CTRYAG	1 cut(s)	2178
BstV1I	GCAGC	3 cut(s)	518, 857, 1565
BstV2I	GAAGAC	3 cut(s)	63, 987, 1932
BstX2I	RGATCY	3 cut(s)	634, 664, 1951
BstYI	RGATCY	3 cut(s)	634, 664, 1951
Bsu36I	CCTNAGG	1 cut(s)	750
BsuI	GTATCC	1 cut(s)	1753
BtgI	CCRYGG	1 cut(s)	1774
BtgZI	GCGATG	1 cut(s)	1527
BtrI	CACGTC	1 cut(s)	1598
BtsCI	GGATG	4 cut(s)	955, 2024, 2126, 2173
BtsI	GCAGTG	1 cut(s)	1956
BtsIMutI	CAGTG	5 cut(s)	931, 1735, 1863, 1956, 2004
Cac8I	GCNNGC	1 cut(s)	29
CciI	TCATGA	1 cut(s)	2208
Cfr13I	GGNCC	1 cut(s)	525
Csp6I	GTAC	3 cut(s)	163, 275, 1424
CviQI	GTAC	3 cut(s)	163, 275, 1424
DdeI	CTNAG	8 cut(s)	6, 267, 750, 1314, 1680, 1767, 1896, 2007
DrdI	GACNNNNNNGTC	1 cut(s)	65
DseDI	GACNNNNNNGTC	1 cut(s)	65
Eam1104I	CTCTTC	6 cut(s)	140, 256, 325, 451, 1083, 1977
EarI	CTCTTC	6 cut(s)	140, 256, 325, 451, 1083, 1977
EciI	GGCGGA	1 cut(s)	70
Ecl136II	GAGCTC	1 cut(s)	1276
Eco130I	CCWWGG	3 cut(s)	1774, 1913, 2162
Eco24I	GRGCYC	3 cut(s)	152, 251, 1278
Eco31I	GGTCTC	1 cut(s)	1047
Eco32I	GATATC	1 cut(s)	336
Eco47I	GGWCC	1 cut(s)	525
Eco53kI	GAGCTC	1 cut(s)	1276
Eco57I	CTGAAG	1 cut(s)	2001
Eco81I	CCTNAGG	1 cut(s)	750
Eco88I	CYCGRG	1 cut(s)	1374
EcoICRI	GAGCTC	1 cut(s)	1276
EcoRI	GAATTC	1 cut(s)	448
EcoRII	CCWGG	6 cut(s)	110, 385, 1004, 1450, 1546, 1754
EcoRV	GATATC	1 cut(s)	336
EcoT14I	CCWWGG	3 cut(s)	1774, 1913, 2162
EcoT22I	ATGCAT	2 cut(s)	1019, 2001
EcoT38I	GRGCYC	3 cut(s)	152, 251, 1278
ErhI	CCWWGG	3 cut(s)	1774, 1913, 2162
FaqI	GGGAC	1 cut(s)	1608
FauNDI	CATATG	1 cut(s)	1026
FblI	GTMKAC	1 cut(s)	1704
Fnu4HI	GCNGC	4 cut(s)	507, 846, 1579, 2144
FokI	GGATG	4 cut(s)	942, 2011, 2113, 2160
FriOI	GRGCYC	3 cut(s)	152, 251, 1278
Fsp4HI	GCNGC	4 cut(s)	507, 846, 1579, 2144
FspBI	CTAG	5 cut(s)	453, 873, 1566, 1584, 2033
GluI	GCNGC	4 cut(s)	507, 846, 1579, 2144
GsuI	CTGGAG	3 cut(s)	830, 955, 1184
HapII	CCGG	1 cut(s)	960
Hin1I	GRCGYC	1 cut(s)	63
HincII	GTYRAC	3 cut(s)	1249, 1626, 1705
HindII	GTYRAC	3 cut(s)	1249, 1626, 1705
HindIII	AAGCTT	2 cut(s)	997, 1713
HpaI	GTTAAC	1 cut(s)	1249
HpaII	CCGG	1 cut(s)	960
HphI	GGTGA	5 cut(s)	581, 974, 1121, 1136, 1647
Hpy166II	GTNNAC	8 cut(s)	165, 836, 919, 1199, 1249, 1626, 1705, 1813
Hpy8I	GTNNAC	8 cut(s)	165, 836, 919, 1199, 1249, 1626, 1705, 1813
Hpy99I	CGWCG	4 cut(s)	56, 65, 68, 71
HpyAV	CCTTC	5 cut(s)	135, 354, 1115, 1749, 2184
HpyCH4III	ACNGT	4 cut(s)	495, 569, 1730, 1910
HpyCH4IV	ACGT	4 cut(s)	63, 167, 362, 1597
HpyCH4V	TGCA	9 cut(s)	506, 644, 1017, 1024, 1523, 1733, 1972, 1999, 2221
HpyF10VI	GCNNNNNNNGC	2 cut(s)	1174, 1388
HpyF3I	CTNAG	8 cut(s)	6, 267, 750, 1314, 1680, 1767, 1896, 2007
HpySE526I	ACGT	4 cut(s)	63, 167, 362, 1597
Hsp92I	GRCGYC	1 cut(s)	63
KspAI	GTTAAC	1 cut(s)	1249
LguI	GCTCTTC	4 cut(s)	140, 256, 325, 451
LmnI	GCTCC	6 cut(s)	191, 933, 1165, 1222, 1246, 1550
Lsp1109I	GCAGC	3 cut(s)	518, 857, 1565
LweI	GCATC	6 cut(s)	229, 386, 631, 1026, 1510, 2135
MaeI	CTAG	5 cut(s)	453, 873, 1566, 1584, 2033
MaeII	ACGT	4 cut(s)	63, 167, 362, 1597
MaeIII	GTNAC	6 cut(s)	223, 569, 646, 1109, 1653, 1991
MbiI	CCGCTC	1 cut(s)	2143
MfeI	CAATTG	1 cut(s)	1145
MflI	RGATCY	3 cut(s)	634, 664, 1951
MhlI	GDGCHC	3 cut(s)	152, 251, 1278
MlyI	GAGTC	7 cut(s)	26, 86, 193, 1194, 1874, 2060, 2143
MmeI	TCCRAC	2 cut(s)	1305, 1651
Mph1103I	ATGCAT	2 cut(s)	1019, 2001
MslI	CAYNNNNRTG	1 cut(s)	960
MspA1I	CMGCKG	1 cut(s)	10
MspI	CCGG	1 cut(s)	960
MspR9I	CCNGG	7 cut(s)	112, 387, 960, 1006, 1452, 1548, 1756
MunI	CAATTG	1 cut(s)	1145
Mva1269I	GAATGC	1 cut(s)	97
MvaI	CCWGG	6 cut(s)	112, 387, 1006, 1452, 1548, 1756
MwoI	GCNNNNNNNGC	2 cut(s)	1174, 1388
NciI	CCSGG	1 cut(s)	960
NcoI	CCATGG	1 cut(s)	1774
NdeI	CATATG	1 cut(s)	1026
NlaIV	GGNNCC	3 cut(s)	636, 929, 1011
NmuCI	GTSAC	5 cut(s)	223, 569, 1109, 1653, 1991
NsiI	ATGCAT	2 cut(s)	1019, 2001
NspI	RCATGY	1 cut(s)	1999
NspV	TTCGAA	1 cut(s)	103
PagI	TCATGA	1 cut(s)	2208
PasI	CCCWGGG	3 cut(s)	111, 1005, 1755
PciSI	GCTCTTC	4 cut(s)	140, 256, 325, 451
PcsI	WCGNNNNNNNCGW	5 cut(s)	51, 57, 60, 66, 1362
PctI	GAATGC	1 cut(s)	97
PflFI	GACNNNGTC	2 cut(s)	62, 65
PkrI	GCNGC	4 cut(s)	508, 847, 1580, 2145
PleI	GAGTC	7 cut(s)	25, 85, 193, 1194, 1874, 2060, 2143
PpsI	GAGTC	7 cut(s)	25, 85, 193, 1194, 1874, 2060, 2143
PshBI	ATTAAT	3 cut(s)	696, 1401, 2097
Psp124BI	GAGCTC	1 cut(s)	1278
Psp6I	CCWGG	6 cut(s)	110, 385, 1004, 1450, 1546, 1754
PspGI	CCWGG	6 cut(s)	110, 385, 1004, 1450, 1546, 1754
PspN4I	GGNNCC	3 cut(s)	636, 929, 1011
PspPI	GGNCC	1 cut(s)	525
PsrI	GAACNNNNNNTAC	2 cut(s)	1152, 1184
PsuI	RGATCY	3 cut(s)	634, 664, 1951
PsyI	GACNNNGTC	2 cut(s)	62, 65
RsaI	GTAC	3 cut(s)	164, 276, 1425
RsaNI	GTAC	3 cut(s)	163, 275, 1424
RseI	CAYNNNNRTG	1 cut(s)	960
SacI	GAGCTC	1 cut(s)	1278
SalI	GTCGAC	1 cut(s)	1703
SapI	GCTCTTC	4 cut(s)	140, 256, 325, 451
SatI	GCNGC	4 cut(s)	507, 846, 1579, 2144
Sau96I	GGNCC	1 cut(s)	525
ScaI	AGTACT	1 cut(s)	1425
SchI	GAGTC	7 cut(s)	26, 86, 193, 1194, 1874, 2060, 2143
ScrFI	CCNGG	7 cut(s)	112, 387, 960, 1006, 1452, 1548, 1756
SduI	GDGCHC	3 cut(s)	152, 251, 1278
SfaNI	GCATC	6 cut(s)	229, 386, 631, 1026, 1510, 2135
SfcI	CTRYAG	1 cut(s)	2178
SfuI	TTCGAA	1 cut(s)	103
SinI	GGWCC	1 cut(s)	525
SmiMI	CAYNNNNRTG	1 cut(s)	960
SmlI	CTYRAG	3 cut(s)	206, 677, 1419
SmoI	CTYRAG	3 cut(s)	206, 677, 1419
SsiI	CCGC	6 cut(s)	10, 31, 81, 396, 1382, 2143
SspMI	CTAG	5 cut(s)	453, 873, 1566, 1584, 2033
SstI	GAGCTC	1 cut(s)	1278
StyD4I	CCNGG	7 cut(s)	110, 385, 958, 1004, 1450, 1546, 1754
StyI	CCWWGG	3 cut(s)	1774, 1913, 2162
TaaI	ACNGT	4 cut(s)	495, 569, 1730, 1910
TaiI	ACGT	4 cut(s)	66, 170, 365, 1600
TatI	WGTACW	3 cut(s)	162, 274, 1423
TauI	GCSGC	1 cut(s)	2146
TscAI	CASTG	5 cut(s)	938, 1735, 1863, 1963, 2011
TseFI	GTSAC	5 cut(s)	223, 569, 1109, 1653, 1991
TseI	GCWGC	3 cut(s)	506, 845, 1578
Tsp45I	GTSAC	5 cut(s)	223, 569, 1109, 1653, 1991
TspDTI	ATGAA	8 cut(s)	369, 682, 898, 1202, 1425, 1458, 1487, 1887
TspRI	CASTG	5 cut(s)	938, 1735, 1863, 1963, 2011
Tth111I	GACNNNGTC	2 cut(s)	62, 65
VpaK11BI	GGWCC	1 cut(s)	525
VspI	ATTAAT	3 cut(s)	696, 1401, 2097
XapI	RAATTY	5 cut(s)	98, 282, 448, 1183, 1494
XbaI	TCTAGA	2 cut(s)	452, 1583
XceI	RCATGY	1 cut(s)	1999
XmiI	GTMKAC	1 cut(s)	1704
XspI	CTAG	5 cut(s)	453, 873, 1566, 1584, 2033
ZraI	GACGTC	1 cut(s)	64
ZrmI	AGTACT	1 cut(s)	1425
Zsp2I	ATGCAT	2 cut(s)	1019, 2001

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.