Prupe.8G104800_v2.0.a1
ERF Family

mTERF

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp08
OG0014330
Physical Location & Seq
Reverse (-)
13560542 .. 13561369
828 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.8G104800.1

Sequence Viewer

Length: 828 bp
ATGCTTCGCACGCTCTGTCTCATCCCAACTCCCTCCTCCTCCTCCTCCTCTCTCACCACCTCAAATCCCCATCCTCCCTCACACTTCATCAAGTTCCGTACATCCTACCGCGAAAACCTCCGCTATCTCAAAACGCTGCGTATCATCTCCCCCGAAACCAACCCCAAAAAGCTCCCCCTCCCCGACGCCACAGACCAAATCCTCTCCACCGTAAATTTCCTCAAGTCCAAGGGCTTTTCCGACCCCGACTTCCCGAGGCTCGCCTTCCTCTCCCCCAAGCTCTTCTCCCCAACCCTCGACCCCACCGACATCGCCCCCGTCTTCGACTTCCTCGCCGCCGAGCTCCCCGCCGACCCTTCGTCCTCCTGTGGCCTCATCCTCCGCTGCCCGGACCTCCTCTTCTCCGACGTCGAGTTCTGCCTCCGCCCCACGCTGCATTATCTCAAACAGTTGGGGCTTGATAAGCTCGGGGCTCCGACGAATTTGAATGCACATTTGTTGAACACGAGGGTGGAGAAGCTCAAGAGGAAGATGAGGTTCCTGAGGAGTTTGACGCTTTCGTACGAGGAGGCAGCGAATGTGTGTGTGAGGCTGCCTGCGATTTTCGGGTACAGCGTGGAGGATAACTTGCGGCCCAAGTATGAGTACTTGGTGAAGGAGATGGGGAGGAGTGTGGATGAGTTGAAGAAGTTTCCTCAGTATTTTGGGTTTAGTTTGGAGAAGAGAATAGTGCCGAGGCATTTGCATTTGAAAGAGAGGAATGTTGAGATTCCGTTGAACAGGATGTTGCTGTGGAGTGACCAAAAGTTCTATGCCAAGTGGAAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
mTERF

Protein Analysis

276

Amino Acids

31.64

Weight (kDa)

9.5

Isoelectric Point (pI)

46.25

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0014330)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G18870
fragaria_vesca FvH4_2g08020
malus_domestica MD10G1082300.v1.1
prunus_persica Prupe.8G104800_v2.0.a1
pyrus_communis pycom10g06490
rosa_chinensis RchiOBHm_Chr6g0262541
rosa_laevigata RLG00000014419
rosa_multiflora Rmu_sc0000596.1_g000014
rosa_roxburghii Rroxscaffold_177G00434400 Rroxscaffold_7G00205180
rosa_rugosa Rorug05G0598000
rosa_samantha Rh6AG119100 Rh6BG113200 Rh6CG111400 Rh6DG101100
rosa_wichuraiana Rw6G010290 Rw6G010770

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 411
AccII CGCG 1 cut(s) 111
AciI CCGC 7 cut(s) 109, 121, 336, 348, 382, 424, 631
AcsI RAATTY 2 cut(s) 214, 481
AcyI GRCGYC 2 cut(s) 186, 408
AfaI GTAC 4 cut(s) 100, 563, 611, 647
AfiI CCNNNNNNNGG 1 cut(s) 388
AgsI TTSAA 5 cut(s) 487, 502, 685, 751, 778
AhdI GACNNNNNGTC 1 cut(s) 358
AleI CACNNNNGTG 1 cut(s) 509
AluBI AGCT 5 cut(s) 172, 280, 343, 466, 520
AluI AGCT 5 cut(s) 172, 280, 343, 466, 520
Alw21I GWGCWC 1 cut(s) 345
Alw26I GTCTC 1 cut(s) 23
Ama87I CYCGRG 2 cut(s) 253, 467
AoxI GGCC 2 cut(s) 370, 632
ApeKI GCWGC 5 cut(s) 136, 384, 433, 572, 592
ApoI RAATTY 2 cut(s) 214, 481
AspS9I GGNCC 2 cut(s) 391, 633
AsuC2I CCSGG 1 cut(s) 389
AsuHPI GGTGA 2 cut(s) 46, 664
AvaI CYCGRG 2 cut(s) 253, 467
AvaII GGWCC 1 cut(s) 391
AxyI CCTNAGG 1 cut(s) 542
BanII GRGCYC 2 cut(s) 345, 475
BauI CACGAG 1 cut(s) 505
BbsI GAAGAC 1 cut(s) 313
Bbv12I GWGCWC 1 cut(s) 345
BbvI GCAGC 5 cut(s) 123, 371, 420, 579, 584
BccI CCATC 2 cut(s) 78, 655
BcgI CGANNNNNNTGC 2 cut(s) 724, 758
BcnI CCSGG 1 cut(s) 389
BcoDI GTCTC 1 cut(s) 23
BisI GCNGC 7 cut(s) 137, 336, 385, 434, 573, 593, 632
BlsI GCNGC 7 cut(s) 138, 337, 386, 435, 574, 594, 633
BmcAI AGTACT 1 cut(s) 647
Bme1390I CCNGG 1 cut(s) 389
Bme18I GGWCC 1 cut(s) 391
BmeRI GACNNNNNGTC 1 cut(s) 358
BmeT110I CYCGRG 2 cut(s) 253, 467
BmgT120I GGNCC 2 cut(s) 391, 633
BmiI GGNNCC 2 cut(s) 474, 539
BmrFI CCNGG 1 cut(s) 389
BpiI GAAGAC 1 cut(s) 313
BpuEI CTTGAG 2 cut(s) 206, 506
BpuMI CCSGG 1 cut(s) 389
BsaHI GRCGYC 2 cut(s) 186, 408
BsaJI CCNNGG 3 cut(s) 228, 254, 734
Bsc4I CCNNNNNNNGG 1 cut(s) 388
Bse21I CCTNAGG 1 cut(s) 542
BseDI CCNNGG 3 cut(s) 228, 254, 734
BseGI GGATG 6 cut(s) 21, 70, 101, 375, 682, 789
BseLI CCNNNNNNNGG 1 cut(s) 388
BseMII CTCAG 2 cut(s) 533, 710
BseRI GAGGAG 9 cut(s) 25, 28, 31, 34, 37, 386, 559, 581, 682
BseXI GCAGC 5 cut(s) 123, 371, 420, 579, 584
Bsh1236I CGCG 1 cut(s) 111
BshFI GGCC 2 cut(s) 372, 634
BsiHKAI GWGCWC 1 cut(s) 345
BsiHKCI CYCGRG 2 cut(s) 253, 467
BsiSI CCGG 1 cut(s) 389
BsiWI CGTACG 1 cut(s) 561
BslI CCNNNNNNNGG 1 cut(s) 388
BsmAI GTCTC 1 cut(s) 23
BsmI GAATGC 1 cut(s) 493
BsnI GGCC 2 cut(s) 372, 634
BsoBI CYCGRG 2 cut(s) 253, 467
Bsp1286I GDGCHC 2 cut(s) 345, 475
BspACI CCGC 7 cut(s) 109, 121, 336, 348, 382, 424, 631
BspANI GGCC 2 cut(s) 372, 634
BspCNI CTCAG 2 cut(s) 534, 709
BspFNI CGCG 1 cut(s) 111
BspLI GGNNCC 2 cut(s) 474, 539
BspQI GCTCTTC 1 cut(s) 287
BssECI CCNNGG 3 cut(s) 228, 254, 734
BssNI GRCGYC 2 cut(s) 186, 408
BssSI CACGAG 1 cut(s) 505
BssT1I CCWWGG 1 cut(s) 228
Bst2BI CACGAG 1 cut(s) 505
Bst4CI ACNGT 2 cut(s) 211, 450
Bst6I CTCTTC 3 cut(s) 287, 404, 716
BstACI GRCGYC 2 cut(s) 186, 408
BstC8I GCNNGC 3 cut(s) 11, 261, 597
BstDEI CTNAG 2 cut(s) 542, 696
BstF5I GGATG 6 cut(s) 21, 70, 101, 375, 682, 789
BstFNI CGCG 1 cut(s) 111
BstMAI GTCTC 1 cut(s) 23
BstMWI GCNNNNNNNGC 2 cut(s) 10, 463
BstSCI CCNGG 1 cut(s) 387
BstUI CGCG 1 cut(s) 111
BstV1I GCAGC 5 cut(s) 123, 371, 420, 579, 584
BstV2I GAAGAC 1 cut(s) 313
Bsu36I CCTNAGG 1 cut(s) 542
BsuRI GGCC 2 cut(s) 372, 634
BtgZI GCGATG 1 cut(s) 295
BtsCI GGATG 6 cut(s) 21, 70, 101, 375, 682, 789
Cac8I GCNNGC 3 cut(s) 11, 261, 597
Cfr13I GGNCC 2 cut(s) 391, 633
CseI GACGC 2 cut(s) 194, 562
Csp6I GTAC 4 cut(s) 99, 562, 610, 646
CviQI GTAC 4 cut(s) 99, 562, 610, 646
DdeI CTNAG 2 cut(s) 542, 696
DriI GACNNNNNGTC 1 cut(s) 358
Eam1104I CTCTTC 3 cut(s) 287, 404, 716
Eam1105I GACNNNNNGTC 1 cut(s) 358
EarI CTCTTC 3 cut(s) 287, 404, 716
EciI GGCGGA 1 cut(s) 413
Ecl136II GAGCTC 1 cut(s) 343
Eco130I CCWWGG 1 cut(s) 228
Eco24I GRGCYC 2 cut(s) 345, 475
Eco47I GGWCC 1 cut(s) 391
Eco53kI GAGCTC 1 cut(s) 343
Eco81I CCTNAGG 1 cut(s) 542
Eco88I CYCGRG 2 cut(s) 253, 467
EcoICRI GAGCTC 1 cut(s) 343
EcoT14I CCWWGG 1 cut(s) 228
EcoT38I GRGCYC 2 cut(s) 345, 475
ErhI CCWWGG 1 cut(s) 228
FaiI YATR 2 cut(s) 642, 813
FauI CCCGC 1 cut(s) 355
Fnu4HI GCNGC 7 cut(s) 137, 336, 385, 434, 573, 593, 632
FokI GGATG 6 cut(s) 8, 57, 88, 362, 689, 796
FriOI GRGCYC 2 cut(s) 345, 475
Fsp4HI GCNGC 7 cut(s) 137, 336, 385, 434, 573, 593, 632
GluI GCNGC 7 cut(s) 137, 336, 385, 434, 573, 593, 632
HaeIII GGCC 2 cut(s) 372, 634
HapII CCGG 1 cut(s) 389
HgaI GACGC 2 cut(s) 194, 562
Hin1I GRCGYC 2 cut(s) 186, 408
HinfI GANTC 1 cut(s) 769
HpaII CCGG 1 cut(s) 389
HphI GGTGA 2 cut(s) 46, 664
Hpy188I TCNGA 3 cut(s) 241, 406, 477
Hpy188III TCNNGA 3 cut(s) 253, 523, 541
Hpy99I CGWCG 4 cut(s) 188, 410, 413, 481
HpyAV CCTTC 3 cut(s) 274, 366, 649
HpyCH4III ACNGT 2 cut(s) 211, 450
HpyCH4IV ACGT 1 cut(s) 408
HpyCH4V TGCA 3 cut(s) 436, 491, 745
HpyF10VI GCNNNNNNNGC 2 cut(s) 10, 463
HpyF3I CTNAG 2 cut(s) 542, 696
HpySE526I ACGT 1 cut(s) 408
Hsp92I GRCGYC 2 cut(s) 186, 408
LguI GCTCTTC 1 cut(s) 287
LmnI GCTCC 3 cut(s) 177, 348, 478
LpnPI CCDG 5 cut(s) 379, 402, 554, 609, 766
Lsp1109I GCAGC 5 cut(s) 123, 371, 420, 579, 584
MaeII ACGT 1 cut(s) 408
MaeIII GTNAC 1 cut(s) 797
MboII GAAGA 6 cut(s) 274, 313, 391, 541, 697, 733
MhlI GDGCHC 2 cut(s) 345, 475
MluCI AATT 2 cut(s) 214, 481
MmeI TCCRAC 3 cut(s) 264, 429, 500
MslI CAYNNNNRTG 1 cut(s) 509
MspA1I CMGCKG 1 cut(s) 384
MspI CCGG 1 cut(s) 389
MspR9I CCNGG 1 cut(s) 389
Mva1269I GAATGC 1 cut(s) 493
MvnI CGCG 1 cut(s) 111
MwoI GCNNNNNNNGC 2 cut(s) 10, 463
NciI CCSGG 1 cut(s) 389
NlaIV GGNNCC 2 cut(s) 474, 539
NmeAIII GCCGAG 2 cut(s) 364, 759
NmuCI GTSAC 1 cut(s) 797
OliI CACNNNNGTG 1 cut(s) 509
PciSI GCTCTTC 1 cut(s) 287
PcsI WCGNNNNNNNCGW 2 cut(s) 303, 612
PctI GAATGC 1 cut(s) 493
PfeI GAWTC 1 cut(s) 769
Pfl23II CGTACG 1 cut(s) 561
PkrI GCNGC 7 cut(s) 138, 337, 386, 435, 574, 594, 633
Psp124BI GAGCTC 1 cut(s) 345
PspLI CGTACG 1 cut(s) 561
PspN4I GGNNCC 2 cut(s) 474, 539
PspPI GGNCC 2 cut(s) 391, 633
RsaI GTAC 4 cut(s) 100, 563, 611, 647
RsaNI GTAC 4 cut(s) 99, 562, 610, 646
RseI CAYNNNNRTG 1 cut(s) 509
SacI GAGCTC 1 cut(s) 345
SapI GCTCTTC 1 cut(s) 287
SatI GCNGC 7 cut(s) 137, 336, 385, 434, 573, 593, 632
Sau96I GGNCC 2 cut(s) 391, 633
ScaI AGTACT 1 cut(s) 647
ScrFI CCNGG 1 cut(s) 389
SduI GDGCHC 2 cut(s) 345, 475
SinI GGWCC 1 cut(s) 391
SmiMI CAYNNNNRTG 1 cut(s) 509
SmlI CTYRAG 2 cut(s) 221, 521
SmoI CTYRAG 2 cut(s) 221, 521
Sse9I AATT 2 cut(s) 214, 481
SsiI CCGC 7 cut(s) 109, 121, 336, 348, 382, 424, 631
SstI GAGCTC 1 cut(s) 345
StyD4I CCNGG 1 cut(s) 387
StyI CCWWGG 1 cut(s) 228
TaaI ACNGT 2 cut(s) 211, 450
TaiI ACGT 1 cut(s) 411
TaqI TCGA 3 cut(s) 297, 324, 411
TasI AATT 2 cut(s) 214, 481
TatI WGTACW 1 cut(s) 645
TauI GCSGC 2 cut(s) 338, 634
TfiI GAWTC 1 cut(s) 769
TseFI GTSAC 1 cut(s) 797
TseI GCWGC 5 cut(s) 136, 384, 433, 572, 592
Tsp45I GTSAC 1 cut(s) 797
TspDTI ATGAA 1 cut(s) 76
TspGWI ACGGA 2 cut(s) 86, 762
VpaK11BI GGWCC 1 cut(s) 391
XapI RAATTY 2 cut(s) 214, 481
ZraI GACGTC 1 cut(s) 409
ZrmI AGTACT 1 cut(s) 647
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.