Prupe.8G126400_v2.0.a1

Protein of unknown function (DUF1685)

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp08
Physical Location & Seq
Reverse (-)
15081491 .. 15082511
1021 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.8G126400.1

Sequence Viewer

Length: 381 bp
ATGGAGAATACCCAAGCGCCACCGCCTCGACCTCTGTACAAGCAGAACTCGTGGTCGCCCGACACGCTCCGCGACGAGACGTGGCAGCGCCGGAAGAGCAGCTGCAGCGCGCGCCGCCTCAATCGCAGCAAAAGCGTCTCGGAAGACGATTTGGAGGAGCTCAAAGCGTGCATTGAGCTCGGGTTCGGGTTCGATTCGCCCGTTATCGACCCGAAACTGTCCGATACTTTACCCGCCTTGGAGTTTTACCACGCTGTAAATACGCAGTGCAGTAAGAGCTTGTTAACAGAAGTTGGTGATGCGGAGATGGTGAAGATGAGGTTGAGGCAGTGGGCCCAGTTGGTCGCTTGCGCGGTTCGGCAATCATCTTCTTCTATCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

127

Amino Acids

14.27

Weight (kDa)

6.58

Isoelectric Point (pI)

74.69

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0015001)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G15590 AT2G15590 AT2G15610 AT4G33985
fragaria_vesca FvH4_2g05911
malus_domestica MD05G1081800.v1.1
prunus_persica Prupe.8G126400_v2.0.a1 Prupe.8G126400_v2.0.a1
pyrus_communis pycom05g07660
rosa_chinensis RchiOBHm_Chr6g0257581
rosa_laevigata RLG00000014703
rosa_rugosa Rorug05G0570500 Rorug05G0571600
rosa_samantha Rh6AG089000 Rh6CG077600
rosa_wichuraiana Rw6G007760

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 4 cut(s) 72, 110, 112, 353
AciI CCGC 6 cut(s) 23, 70, 115, 234, 302, 353
AfaI GTAC 1 cut(s) 38
AjiI CACGTC 1 cut(s) 81
AluBI AGCT 4 cut(s) 102, 160, 178, 279
AluI AGCT 4 cut(s) 102, 160, 178, 279
Alw21I GWGCWC 2 cut(s) 162, 180
Alw26I GTCTC 2 cut(s) 71, 142
Ama87I CYCGRG 1 cut(s) 179
AoxI GGCC 1 cut(s) 333
ApaI GGGCCC 1 cut(s) 337
ApeKI GCWGC 5 cut(s) 85, 99, 102, 105, 126
AspLEI GCGC 6 cut(s) 19, 90, 110, 112, 114, 353
AspS9I GGNCC 2 cut(s) 333, 334
AsuHPI GGTGA 2 cut(s) 308, 322
AvaI CYCGRG 1 cut(s) 179
BaeGI GKGCMC 1 cut(s) 337
BanII GRGCYC 3 cut(s) 162, 180, 337
BauI CACGAG 1 cut(s) 49
BbsI GAAGAC 1 cut(s) 150
Bbv12I GWGCWC 2 cut(s) 162, 180
BbvI GCAGC 5 cut(s) 89, 97, 111, 117, 138
BccI CCATC 1 cut(s) 301
BcgI CGANNNNNNTGC 2 cut(s) 160, 194
BcoDI GTCTC 2 cut(s) 71, 142
BfmI CTRYAG 1 cut(s) 103
BfoI RGCGCY 2 cut(s) 20, 91
BisI GCNGC 6 cut(s) 86, 100, 103, 106, 115, 127
BlsI GCNGC 6 cut(s) 87, 101, 104, 107, 116, 128
BmeT110I CYCGRG 1 cut(s) 179
BmgBI CACGTC 1 cut(s) 81
BmgT120I GGNCC 2 cut(s) 333, 334
BmiI GGNNCC 1 cut(s) 335
BmrI ACTGGG 1 cut(s) 331
BmsI GCATC 1 cut(s) 289
BmuI ACTGGG 1 cut(s) 331
BpiI GAAGAC 1 cut(s) 150
BsaJI CCNNGG 1 cut(s) 237
Bse1I ACTGG 1 cut(s) 337
BseDI CCNNGG 1 cut(s) 237
BseNI ACTGG 1 cut(s) 337
BsePI GCGCGC 2 cut(s) 108, 110
BseRI GAGGAG 1 cut(s) 170
BseSI GKGCMC 1 cut(s) 337
BseXI GCAGC 5 cut(s) 89, 97, 111, 117, 138
BsgI GTGCAG 1 cut(s) 289
Bsh1236I CGCG 4 cut(s) 72, 110, 112, 353
BshFI GGCC 1 cut(s) 335
BsiHKAI GWGCWC 2 cut(s) 162, 180
BsiHKCI CYCGRG 1 cut(s) 179
BsiSI CCGG 1 cut(s) 91
BsmAI GTCTC 2 cut(s) 71, 142
BsmBI CGTCTC 2 cut(s) 71, 142
BsnI GGCC 1 cut(s) 335
BsoBI CYCGRG 1 cut(s) 179
Bsp120I GGGCCC 1 cut(s) 333
Bsp1286I GDGCHC 3 cut(s) 162, 180, 337
Bsp1407I TGTACA 1 cut(s) 36
BspACI CCGC 6 cut(s) 23, 70, 115, 234, 302, 353
BspANI GGCC 1 cut(s) 335
BspFNI CGCG 4 cut(s) 72, 110, 112, 353
BspLI GGNNCC 1 cut(s) 335
BspMAI CTGCAG 1 cut(s) 107
BspQI GCTCTTC 1 cut(s) 89
BsrGI TGTACA 1 cut(s) 36
BsrI ACTGG 1 cut(s) 337
BssECI CCNNGG 1 cut(s) 237
BssHII GCGCGC 2 cut(s) 108, 110
BssSI CACGAG 1 cut(s) 49
BssT1I CCWWGG 1 cut(s) 237
Bst2BI CACGAG 1 cut(s) 49
Bst4CI ACNGT 1 cut(s) 219
Bst6I CTCTTC 1 cut(s) 89
BstAUI TGTACA 1 cut(s) 36
BstC8I GCNNGC 4 cut(s) 110, 112, 169, 349
BstFNI CGCG 4 cut(s) 72, 110, 112, 353
BstH2I RGCGCY 2 cut(s) 20, 91
BstHHI GCGC 6 cut(s) 19, 90, 110, 112, 114, 353
BstMAI GTCTC 2 cut(s) 71, 142
BstMWI GCNNNNNNNGC 8 cut(s) 64, 96, 105, 111, 114, 123, 132, 276
BstSFI CTRYAG 1 cut(s) 103
BstSLI GKGCMC 1 cut(s) 337
BstUI CGCG 4 cut(s) 72, 110, 112, 353
BstV1I GCAGC 5 cut(s) 89, 97, 111, 117, 138
BstV2I GAAGAC 1 cut(s) 150
BsuRI GGCC 1 cut(s) 335
BtrI CACGTC 1 cut(s) 81
BtsI GCAGTG 2 cut(s) 272, 335
BtsIMutI CAGTG 2 cut(s) 272, 335
Cac8I GCNNGC 4 cut(s) 110, 112, 169, 349
CfoI GCGC 6 cut(s) 19, 90, 110, 112, 114, 353
Cfr13I GGNCC 2 cut(s) 333, 334
CseI GACGC 1 cut(s) 124
Csp6I GTAC 1 cut(s) 37
CviJI RGCY 5 cut(s) 102, 160, 178, 279, 335
CviKI_1 RGCY 5 cut(s) 102, 160, 178, 279, 335
CviQI GTAC 1 cut(s) 37
Eam1104I CTCTTC 1 cut(s) 89
EarI CTCTTC 1 cut(s) 89
Ecl136II GAGCTC 2 cut(s) 160, 178
Eco130I CCWWGG 1 cut(s) 237
Eco24I GRGCYC 3 cut(s) 162, 180, 337
Eco53kI GAGCTC 2 cut(s) 160, 178
Eco88I CYCGRG 1 cut(s) 179
EcoICRI GAGCTC 2 cut(s) 160, 178
EcoT14I CCWWGG 1 cut(s) 237
EcoT38I GRGCYC 3 cut(s) 162, 180, 337
ErhI CCWWGG 1 cut(s) 237
Esp3I CGTCTC 2 cut(s) 71, 142
FauI CCCGC 1 cut(s) 241
Fnu4HI GCNGC 6 cut(s) 86, 100, 103, 106, 115, 127
FriOI GRGCYC 3 cut(s) 162, 180, 337
Fsp4HI GCNGC 6 cut(s) 86, 100, 103, 106, 115, 127
GlaI GCGC 6 cut(s) 18, 89, 109, 111, 113, 352
GluI GCNGC 6 cut(s) 86, 100, 103, 106, 115, 127
HaeII RGCGCY 2 cut(s) 20, 91
HaeIII GGCC 1 cut(s) 335
HapII CCGG 1 cut(s) 91
HgaI GACGC 1 cut(s) 124
HhaI GCGC 6 cut(s) 19, 90, 110, 112, 114, 353
Hin6I GCGC 6 cut(s) 17, 88, 108, 110, 112, 351
HinP1I GCGC 6 cut(s) 17, 88, 108, 110, 112, 351
HincII GTYRAC 1 cut(s) 285
HindII GTYRAC 1 cut(s) 285
HinfI GANTC 1 cut(s) 194
HpaI GTTAAC 1 cut(s) 285
HpaII CCGG 1 cut(s) 91
HphI GGTGA 2 cut(s) 308, 322
Hpy166II GTNNAC 1 cut(s) 285
Hpy188I TCNGA 2 cut(s) 142, 223
Hpy8I GTNNAC 1 cut(s) 285
Hpy99I CGWCG 1 cut(s) 77
HpyCH4III ACNGT 1 cut(s) 219
HpyCH4IV ACGT 1 cut(s) 80
HpyCH4V TGCA 3 cut(s) 105, 171, 270
HpyF10VI GCNNNNNNNGC 8 cut(s) 64, 96, 105, 111, 114, 123, 132, 276
HpySE526I ACGT 1 cut(s) 80
HspAI GCGC 6 cut(s) 17, 88, 108, 110, 112, 351
KspAI GTTAAC 1 cut(s) 285
LguI GCTCTTC 1 cut(s) 89
LmnI GCTCC 2 cut(s) 72, 157
LpnPI CCDG 2 cut(s) 104, 350
Lsp1109I GCAGC 5 cut(s) 89, 97, 111, 117, 138
LweI GCATC 1 cut(s) 289
MaeII ACGT 1 cut(s) 80
MboII GAAGA 5 cut(s) 106, 155, 325, 360, 363
MhlI GDGCHC 3 cut(s) 162, 180, 337
MnlI CCTC 6 cut(s) 36, 42, 128, 148, 312, 318
MseI TTAA 1 cut(s) 284
MspA1I CMGCKG 1 cut(s) 102
MspI CCGG 1 cut(s) 91
MvnI CGCG 4 cut(s) 72, 110, 112, 353
MwoI GCNNNNNNNGC 8 cut(s) 64, 96, 105, 111, 114, 123, 132, 276
NlaIV GGNNCC 1 cut(s) 335
PauI GCGCGC 2 cut(s) 108, 110
PciSI GCTCTTC 1 cut(s) 89
PcsI WCGNNNNNNNCGW 1 cut(s) 198
PfeI GAWTC 1 cut(s) 194
PkrI GCNGC 6 cut(s) 87, 101, 104, 107, 116, 128
Psp124BI GAGCTC 2 cut(s) 162, 180
PspN4I GGNNCC 1 cut(s) 335
PspOMI GGGCCC 1 cut(s) 333
PspPI GGNCC 2 cut(s) 333, 334
PstI CTGCAG 1 cut(s) 107
PteI GCGCGC 2 cut(s) 108, 110
PvuII CAGCTG 1 cut(s) 102
RsaI GTAC 1 cut(s) 38
RsaNI GTAC 1 cut(s) 37
SacI GAGCTC 2 cut(s) 162, 180
SapI GCTCTTC 1 cut(s) 89
SaqAI TTAA 1 cut(s) 284
SatI GCNGC 6 cut(s) 86, 100, 103, 106, 115, 127
Sau96I GGNCC 2 cut(s) 333, 334
SduI GDGCHC 3 cut(s) 162, 180, 337
SetI ASST 7 cut(s) 34, 83, 104, 162, 180, 281, 323
SfaNI GCATC 1 cut(s) 289
SfcI CTRYAG 1 cut(s) 103
SsiI CCGC 6 cut(s) 23, 70, 115, 234, 302, 353
SstI GAGCTC 2 cut(s) 162, 180
StyI CCWWGG 1 cut(s) 237
TaaI ACNGT 1 cut(s) 219
TaiI ACGT 1 cut(s) 83
TaqI TCGA 3 cut(s) 28, 192, 207
TatI WGTACW 1 cut(s) 36
TauI GCSGC 1 cut(s) 117
TfiI GAWTC 1 cut(s) 194
Tru1I TTAA 1 cut(s) 284
Tru9I TTAA 1 cut(s) 284
TscAI CASTG 2 cut(s) 272, 335
TseI GCWGC 5 cut(s) 85, 99, 102, 105, 126
TspRI CASTG 2 cut(s) 272, 335
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.