Prupe.8G144700_v2.0.a1

Mitochondrial outer membrane protein porin

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp08
Physical Location & Seq
Forward (+)
16093693 .. 16096240
2548 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.8G144700.1

Sequence Viewer

Length: 870 bp
ATGAGCAAGTCTAACCACAAAACCAAGAGCAAACCCACAAGCAAGGGACCTCCATGTTTCTCTGAGTTTGGTCAGAAAGCTAAAGACTTGCTTACCAGTGGATATTCCAGGAGCCAGAAATTTAGCTTCACAACCCACAGTGATGGTGGATTGAAAATTACTTCAACCGCGGCAAAGAAGGGAGGTTGCTCAACTGCAGCTGTGGCAGGAGCATACACATACAAGAATGCAAATTTTGACTGTCGAATCGATACGGATTCAAAAATTACTGGAACCCTCACTTTAAATGAGAAGTTTCTGTCAAGCACGAATACTAGCGCTTCATTCAGCTTGCCTGATTACCAATCAAGCAAGCTCCGGGTTCGAATACACCAAGAATATGCTGCTCTGTCCACATCTGTGGCTTTGAACAAGTCCCCTGCAATAACCTTTTCAGCAGCTGTAGGGAGTTCAAGCATTGCCCTTGGTATGGAGACAGAGTACAAAACTGCTTCTAGCTCTTTCTCCAAGTGCAGTGCAGGCATTTACATGAAGAGTCTCAATTCTGATGCTTCAATAATTCTGGCAAACAAAGGTGACTTGCTAACAGCATCATGTGTTCTTTATCTCAATAAACAAAAGAAGAATGCAGCAGTGGTAGAGTTCACTCAAAAGCTGTCAACAAAGAGAAACACCTTGACAGTTGGAGGATCATATGCTGTTGATCATCAAACAGTAGTGAAAGCTAGACTTGACGATCACGGAGAGTTTAAGACTGTTCTACAGTACAATGTTAGACCCAAGTCATGCCTGGCTATCTCTGGTGAATTCAACACCAAGGCACCTGACAAGATTCCTAAAATTGGGTTGGCACTTTCTCTTGTTCTTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

290

Amino Acids

30.88

Weight (kDa)

9.62

Isoelectric Point (pI)

32.16

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0014819)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 820
AccII CGCG 1 cut(s) 170
AciI CCGC 2 cut(s) 168, 170
AclWI GGATC 1 cut(s) 697
AcsI RAATTY 3 cut(s) 119, 232, 806
AfaI GTAC 2 cut(s) 482, 767
AfeI AGCGCT 1 cut(s) 319
AfiI CCNNNNNNNGG 2 cut(s) 469, 842
AgsI TTSAA 7 cut(s) 154, 165, 261, 409, 453, 555, 811
AjnI CCWGG 2 cut(s) 107, 789
AleI CACNNNNGTG 1 cut(s) 398
AluBI AGCT 9 cut(s) 80, 126, 200, 330, 355, 440, 498, 655, 725
AluI AGCT 9 cut(s) 80, 126, 200, 330, 355, 440, 498, 655, 725
Alw26I GTCTC 2 cut(s) 467, 542
AlwI GGATC 1 cut(s) 697
AlwNI CAGNNNCTG 1 cut(s) 440
Aor51HI AGCGCT 1 cut(s) 319
ApeKI GCWGC 4 cut(s) 197, 383, 437, 629
ApoI RAATTY 3 cut(s) 119, 232, 806
AspLEI GCGC 1 cut(s) 320
AspS9I GGNCC 1 cut(s) 47
AsuC2I CCSGG 1 cut(s) 359
AsuHPI GGTGA 2 cut(s) 587, 815
AsuII TTCGAA 1 cut(s) 364
AvaII GGWCC 1 cut(s) 47
BanI GGYRCC 1 cut(s) 820
BbvI GCAGC 4 cut(s) 209, 370, 449, 641
BccI CCATC 1 cut(s) 137
BciT130I CCWGG 2 cut(s) 109, 791
BclI TGATCA 1 cut(s) 703
BcnI CCSGG 1 cut(s) 359
BcoDI GTCTC 2 cut(s) 467, 542
BfaI CTAG 3 cut(s) 315, 495, 726
BfmI CTRYAG 3 cut(s) 195, 441, 761
BfoI RGCGCY 1 cut(s) 321
BisI GCNGC 5 cut(s) 171, 198, 384, 438, 630
BlsI GCNGC 5 cut(s) 172, 199, 385, 439, 631
Bme1390I CCNGG 3 cut(s) 109, 359, 791
Bme18I GGWCC 1 cut(s) 47
BmgT120I GGNCC 1 cut(s) 47
BmiI GGNNCC 4 cut(s) 48, 113, 274, 822
BmrFI CCNGG 3 cut(s) 109, 359, 791
BmsI GCATC 2 cut(s) 538, 599
BoxI GACNNNNGTC 1 cut(s) 781
Bpu14I TTCGAA 1 cut(s) 364
BpuMI CCSGG 1 cut(s) 359
Bsa29I ATCGAT 1 cut(s) 249
BsaJI CCNNGG 3 cut(s) 168, 463, 816
BsaXI ACNNNNNCTCC 2 cut(s) 464, 494
Bsc4I CCNNNNNNNGG 2 cut(s) 469, 842
Bse1I ACTGG 2 cut(s) 96, 274
Bse3DI GCAATG 1 cut(s) 456
BseBI CCWGG 2 cut(s) 109, 791
BseCI ATCGAT 1 cut(s) 249
BseDI CCNNGG 3 cut(s) 168, 463, 816
BseLI CCNNNNNNNGG 2 cut(s) 469, 842
BseMI GCAATG 1 cut(s) 456
BseMII CTCAG 1 cut(s) 54
BseNI ACTGG 2 cut(s) 96, 274
BseXI GCAGC 4 cut(s) 209, 370, 449, 641
BsgI GTGCAG 2 cut(s) 532, 537
Bsh1236I CGCG 1 cut(s) 170
BshNI GGYRCC 1 cut(s) 820
BshVI ATCGAT 1 cut(s) 249
BsiSI CCGG 1 cut(s) 358
BslFI GGGAC 2 cut(s) 60, 400
BslI CCNNNNNNNGG 2 cut(s) 469, 842
BsmAI GTCTC 2 cut(s) 467, 542
BsmFI GGGAC 2 cut(s) 60, 400
BsmI GAATGC 2 cut(s) 232, 631
Bsp119I TTCGAA 1 cut(s) 364
Bsp143I GATC 3 cut(s) 689, 703, 736
BspACI CCGC 2 cut(s) 168, 170
BspCNI CTCAG 1 cut(s) 55
BspDI ATCGAT 1 cut(s) 249
BspFNI CGCG 1 cut(s) 170
BspLI GGNNCC 4 cut(s) 48, 113, 274, 822
BspMAI CTGCAG 1 cut(s) 199
BspPI GGATC 1 cut(s) 697
BspT104I TTCGAA 1 cut(s) 364
BspT107I GGYRCC 1 cut(s) 820
BsrDI GCAATG 1 cut(s) 456
BsrI ACTGG 2 cut(s) 96, 274
BssECI CCNNGG 3 cut(s) 168, 463, 816
BssMI GATC 3 cut(s) 689, 703, 736
BssT1I CCWWGG 2 cut(s) 463, 816
Bst2UI CCWGG 2 cut(s) 109, 791
Bst4CI ACNGT 6 cut(s) 140, 242, 682, 715, 757, 765
Bst6I CTCTTC 1 cut(s) 527
BstBI TTCGAA 1 cut(s) 364
BstC8I GCNNGC 3 cut(s) 332, 353, 520
BstDEI CTNAG 1 cut(s) 63
BstDSI CCRYGG 1 cut(s) 168
BstFNI CGCG 1 cut(s) 170
BstH2I RGCGCY 1 cut(s) 321
BstHHI GCGC 1 cut(s) 320
BstKTI GATC 3 cut(s) 692, 706, 739
BstMAI GTCTC 2 cut(s) 467, 542
BstMBI GATC 3 cut(s) 689, 703, 736
BstMWI GCNNNNNNNGC 2 cut(s) 203, 519
BstNI CCWGG 2 cut(s) 109, 791
BstPAI GACNNNNGTC 1 cut(s) 781
BstSCI CCNGG 3 cut(s) 107, 357, 789
BstSFI CTRYAG 3 cut(s) 195, 441, 761
BstUI CGCG 1 cut(s) 170
BstV1I GCAGC 4 cut(s) 209, 370, 449, 641
BstXI CCANNNNNNTGG 2 cut(s) 143, 400
Bsu15I ATCGAT 1 cut(s) 249
BsuTUI ATCGAT 1 cut(s) 249
BtgI CCRYGG 1 cut(s) 168
BtsI GCAGTG 2 cut(s) 520, 639
BtsIMutI CAGTG 4 cut(s) 103, 145, 520, 639
Cac8I GCNNGC 3 cut(s) 332, 353, 520
CaiI CAGNNNCTG 1 cut(s) 440
CfoI GCGC 1 cut(s) 320
Cfr13I GGNCC 1 cut(s) 47
Cfr42I CCGCGG 1 cut(s) 171
ClaI ATCGAT 1 cut(s) 249
Csp6I GTAC 2 cut(s) 481, 766
CviAII CATG 4 cut(s) 54, 529, 594, 786
CviQI GTAC 2 cut(s) 481, 766
DdeI CTNAG 1 cut(s) 63
DpnI GATC 3 cut(s) 691, 705, 738
DpnII GATC 3 cut(s) 689, 703, 736
DraI TTTAAA 1 cut(s) 285
Eam1104I CTCTTC 1 cut(s) 527
EarI CTCTTC 1 cut(s) 527
Eco130I CCWWGG 2 cut(s) 463, 816
Eco47I GGWCC 1 cut(s) 47
Eco47III AGCGCT 1 cut(s) 319
EcoO109I RGGNCCY 1 cut(s) 47
EcoRI GAATTC 1 cut(s) 806
EcoRII CCWGG 2 cut(s) 107, 789
EcoT14I CCWWGG 2 cut(s) 463, 816
ErhI CCWWGG 2 cut(s) 463, 816
FaeI CATG 4 cut(s) 57, 532, 597, 789
FalI AAGNNNNNCTT 4 cut(s) 75, 107, 714, 746
FaqI GGGAC 2 cut(s) 60, 400
FatI CATG 4 cut(s) 53, 528, 593, 785
FauNDI CATATG 1 cut(s) 694
FbaI TGATCA 1 cut(s) 703
Fnu4HI GCNGC 5 cut(s) 171, 198, 384, 438, 630
Fsp4HI GCNGC 5 cut(s) 171, 198, 384, 438, 630
FspBI CTAG 3 cut(s) 315, 495, 726
GlaI GCGC 1 cut(s) 319
GluI GCNGC 5 cut(s) 171, 198, 384, 438, 630
HaeII RGCGCY 1 cut(s) 321
HapII CCGG 1 cut(s) 358
HhaI GCGC 1 cut(s) 320
Hin1II CATG 4 cut(s) 57, 532, 597, 789
Hin6I GCGC 1 cut(s) 318
HinP1I GCGC 1 cut(s) 318
HincII GTYRAC 1 cut(s) 660
HindII GTYRAC 1 cut(s) 660
HinfI GANTC 4 cut(s) 246, 257, 535, 832
HpaII CCGG 1 cut(s) 358
HphI GGTGA 2 cut(s) 587, 815
Hpy166II GTNNAC 3 cut(s) 393, 645, 660
Hpy188I TCNGA 3 cut(s) 64, 75, 547
Hpy8I GTNNAC 3 cut(s) 393, 645, 660
HpyAV CCTTC 1 cut(s) 172
HpyCH4III ACNGT 6 cut(s) 140, 242, 682, 715, 757, 765
HpyCH4V TGCA 6 cut(s) 197, 230, 422, 513, 518, 629
HpyF10VI GCNNNNNNNGC 2 cut(s) 203, 519
HpyF3I CTNAG 1 cut(s) 63
Hsp92II CATG 4 cut(s) 57, 532, 597, 789
HspAI GCGC 1 cut(s) 318
Ksp22I TGATCA 1 cut(s) 703
KspI CCGCGG 1 cut(s) 171
Kzo9I GATC 3 cut(s) 689, 703, 736
LmnI GCTCC 3 cut(s) 111, 209, 360
Lsp1109I GCAGC 4 cut(s) 209, 370, 449, 641
LweI GCATC 2 cut(s) 538, 599
MaeI CTAG 3 cut(s) 315, 495, 726
MaeIII GTNAC 1 cut(s) 575
MalI GATC 3 cut(s) 691, 705, 738
MboI GATC 3 cut(s) 689, 703, 736
MboII GAAGA 2 cut(s) 544, 634
MluCI AATT 8 cut(s) 119, 156, 232, 264, 541, 558, 806, 840
MlyI GAGTC 1 cut(s) 544
MmeI TCCRAC 1 cut(s) 664
MnlI CCTC 4 cut(s) 60, 176, 287, 680
MseI TTAA 3 cut(s) 284, 750, 868
MslI CAYNNNNRTG 3 cut(s) 141, 398, 527
MspA1I CMGCKG 3 cut(s) 170, 200, 440
MspI CCGG 1 cut(s) 358
MspR9I CCNGG 3 cut(s) 109, 359, 791
Mva1269I GAATGC 2 cut(s) 232, 631
MvaI CCWGG 2 cut(s) 109, 791
MvnI CGCG 1 cut(s) 170
MwoI GCNNNNNNNGC 2 cut(s) 203, 519
NciI CCSGG 1 cut(s) 359
NdeI CATATG 1 cut(s) 694
NdeII GATC 3 cut(s) 689, 703, 736
NlaIII CATG 4 cut(s) 57, 532, 597, 789
NlaIV GGNNCC 4 cut(s) 48, 113, 274, 822
NmuCI GTSAC 1 cut(s) 575
NspV TTCGAA 1 cut(s) 364
OliI CACNNNNGTG 1 cut(s) 398
PctI GAATGC 2 cut(s) 232, 631
PfeI GAWTC 3 cut(s) 246, 257, 832
PfoI TCCNGGA 1 cut(s) 107
PkrI GCNGC 5 cut(s) 172, 199, 385, 439, 631
PleI GAGTC 1 cut(s) 543
PpsI GAGTC 1 cut(s) 543
PpuMI RGGWCCY 1 cut(s) 47
PshAI GACNNNNGTC 1 cut(s) 781
Psp5II RGGWCCY 1 cut(s) 47
Psp6I CCWGG 2 cut(s) 107, 789
PspGI CCWGG 2 cut(s) 107, 789
PspN4I GGNNCC 4 cut(s) 48, 113, 274, 822
PspPI GGNCC 1 cut(s) 47
PspPPI RGGWCCY 1 cut(s) 47
PstI CTGCAG 1 cut(s) 199
PstNI CAGNNNCTG 1 cut(s) 440
PvuII CAGCTG 2 cut(s) 200, 440
RsaI GTAC 2 cut(s) 482, 767
RsaNI GTAC 2 cut(s) 481, 766
RseI CAYNNNNRTG 3 cut(s) 141, 398, 527
SacII CCGCGG 1 cut(s) 171
SaqAI TTAA 3 cut(s) 284, 750, 868
SatI GCNGC 5 cut(s) 171, 198, 384, 438, 630
Sau3AI GATC 3 cut(s) 689, 703, 736
Sau96I GGNCC 1 cut(s) 47
SchI GAGTC 1 cut(s) 544
ScrFI CCNGG 3 cut(s) 109, 359, 791
SfaNI GCATC 2 cut(s) 538, 599
SfcI CTRYAG 3 cut(s) 195, 441, 761
Sfr303I CCGCGG 1 cut(s) 171
SfuI TTCGAA 1 cut(s) 364
SgrBI CCGCGG 1 cut(s) 171
SinI GGWCC 1 cut(s) 47
SmiMI CAYNNNNRTG 3 cut(s) 141, 398, 527
Sse9I AATT 8 cut(s) 119, 156, 232, 264, 541, 558, 806, 840
SsiI CCGC 2 cut(s) 168, 170
SspMI CTAG 3 cut(s) 315, 495, 726
StyD4I CCNGG 3 cut(s) 107, 357, 789
StyI CCWWGG 2 cut(s) 463, 816
TaaI ACNGT 6 cut(s) 140, 242, 682, 715, 757, 765
TaqI TCGA 3 cut(s) 244, 249, 364
TasI AATT 8 cut(s) 119, 156, 232, 264, 541, 558, 806, 840
TatI WGTACW 2 cut(s) 480, 765
TauI GCSGC 1 cut(s) 173
TfiI GAWTC 3 cut(s) 246, 257, 832
Tru1I TTAA 3 cut(s) 284, 750, 868
Tru9I TTAA 3 cut(s) 284, 750, 868
TscAI CASTG 4 cut(s) 103, 145, 520, 639
TseFI GTSAC 1 cut(s) 575
TseI GCWGC 4 cut(s) 197, 383, 437, 629
Tsp45I GTSAC 1 cut(s) 575
TspDTI ATGAA 2 cut(s) 312, 545
TspGWI ACGGA 2 cut(s) 269, 756
TspRI CASTG 4 cut(s) 103, 145, 520, 639
VpaK11BI GGWCC 1 cut(s) 47
XapI RAATTY 3 cut(s) 119, 232, 806
XcmI CCANNNNNNNNNTGG 2 cut(s) 143, 787
XspI CTAG 3 cut(s) 315, 495, 726
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.