Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp08

Orthogroup ID

OG0003687

Physical Location & Seq

Genomic Coordinates Reverse (-)

16364390 .. 16377412

Gene Structure 13023 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.8G150300.8

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3111 bp

ATGGCCAATAACCCTCAGTTTTCAGGTCTACAGCCTCTTCGGCCTCCTATGGTTGGTTCTGTTGATCCTCCTCGAAGTTTGCCTCCCATGTCTTTTCAATTCCGGCCAGTAGTTCCAGCACCACATTCGCAGGAGTTCATTTCTGTGGCTTCTCAAAATTTTCAGCATGTTGGTAGGGGTGTTCCGTTGATGAATGTTAGACTGCCTCCTCCAACTCACCAACCCCAGTTTTCGCAACCAATGCAGCAGTTACCTCCAAGATCTGGTCAGCCAGGTCATGGTATGCTGCCATCACAGGCCATTCCATTGCCAGTTAGTCAGCCCAACAGGAACTTTGCATCTGAATTGCCCCTACCTCAGCCTAATTCACAAGGTCCAAATAACGCCATGCCTAACTTAGGTGGCCCACGAACACCTCTCTCTTCATCATATACTTTCGCACCTTCTTCTTATGGTCAAATGCCAAGAAGTTTTAATGACTCCACCCAGTATCAGTCTATATCTCAATTGCATGCACCTAATGTTTCATCGGAGGGACAAGTTACACCTCTGCAGTACACTGGTGAACGGCCTGCTGTAACCTCTTCCATTGCTCCAGAAACAGGTGTACGGCCTAACTCTGCAGGAGGGACTGTGGCAGAATGGAGAGAGCATACATCTGCTGAAGGAAGAAGATTTTATTACAACAGGAGGACAGGATTATCTACTTGGGAGAAGCCTTTTGAATTGATGACACCACTGGAGAGGGCAGATGCATCAACTAACTGGAAGGAATTCACCAGTCCTGATGGAAGAAAGTATTACTACAACAAAGTCACAAAAGAATCTAGATGGATTATGCCTGAGGAACTGAAGTTGGCTCGAGAGCTAGTAGAAAAGGCGCCTGTGAAGGAAATGCAACAAGAAATGCTTGTAAATCATCATGCTCCAGTCACCGTTTCTCCCCCTGTAGCTGAAGCTGATACGCTAGTCAATGCTGCCCAAGTAGCATCAAGTCCTGTTTCTGTGGCACCTGTTATTGCCACTGGTGATGGTGATGTTCAAACTGCTGCAGCTTCAAGATCATCTACCTCACCTGTTGTGGCTTCTCCTGTAATAGAAAATCCCAATGGAGTTCACACACCTGTTGTTGTACCATCTTCCACTGTGTCAAGTGTAGAAGCTGCTGTTACAATCAACGATACTGTTGCAGAACCAATGGAAAGTTCGAACAATTTATCAGCTCAGGATTTTGTTAGTTCTGCTGATGGAGTTCTGGTACAGGAGAATGAGGAAGCTATGGATGACGTAACAGGAAAGAAAATGAATGATATTGCATCAGAAGAAAAACCAGTTGATCGGGAACCCATAAGTTATGAAAATAAATTGGAGGCTAAAGATGCATTTAAAGCACTCCTGGAGTCTACCAATATTGGTTCTGATTGGACTTGGGATCGGGCCATGAGGGTGATAATTAATGACAAAAGATATGGTGCTCTGAAAACACTTGGAGAGCGGAAGCAAGCTTTTAATGAGTTCTTGGTACAAAGGAAAAAACAAGAGGCTGAGGAAAGACGTATCAAACAGAAAAAGGCAAGGGAAGAATTCAAAAAAATGTTGGAAGAATGCTCAGAGTTAACATCGTCCACAAGATGGGGAAAAGTAGAGAGCATATTTGAACACGATGAACGCTTCAAAGCTGTTGAACGAGATAGAGATCGCAGGGATATGTTTGAAAACTATGTAGAGGAACTCCAAAAGAAAGAACGAGCAAAGGCAATGGAGGAACGTAAGCACAATATAATGGAATACAGGCAATTCTTGGAATCTTGTGACTTCATCAAGGCAAGCAGCCAGTGGCGAAAAGTTCAAGATCGTTTAGAGGCTGATGAGAGATGTTCACGTCTTGAAAAAATTGATCGTTTGGAAATTTTCCAGGAATATCTGCGGGATCTAGAGAAGGAAGAGGAGGAGCAGAGGAGGATACAGAAGGAAGAATTGAGAAAGACAGAACGTAAAAACCGTGATGACTTCCGCAAATTGATGGAAGAGCATCTTGCTGCAGGCACTCTTACGGCTAAATCTCACTGGCGTGATTATTGCATGAAGGTTAAAGACCTACCTACATATCTTGCAGTTGCATCAAACACCTCTGGTTCAACTCCGAAAGATTTGTTTGAAGATGTTGTTGAGGAACTACAAAAACAATATCATGAGGACAAAACTCGAATCAAGGATGCCGTGAAGTTGGGAAAGGTCATGCTTACATCAACCTGGAAGCTTGAAGACTTCAAAACTGTTATATCAAATGATATTGGCTCTCCACCCATATCAGATGCCAACTTAAAGTTCCAGTCTTTGCCAGTCAAGTTGCCCGGATATATGTTAGATGATGAACTGTGCAGTACTCTCTGGGATGAGCTAGTTTTTGATGAGTTATTGGAACGAGTGAAGGAGAAGGAGGAGAAAGAAGCTAAAAAACGTAAACGTCTTGCAGATGACTTCTCTCATCTCTTATCTTCTATCAAGGAGATAACTCCATCTTCTAAGTGGGAGGACTACAAATCACTTCTTGAAGGTAGTCAAGAGTGCAGTGCTATTGGTGAAGAGAGCTTCTGCAAGGAGATATTTGATAAGCATGTAATGCAACTGAAAGAACAAGCAAAAGAGAAAGAGAGAAAACGAAAGGAGGAAAAGGAAAAGAAGGAAAAGGAGAGAGATGATAGAGAAAGGAGAAGGACGAAGCAGAGAAGAGAAAAAGAGGTAGAATATGAAAGAGAAAGAGAGGAACGCCTTAAGAAAGATGGTTTAGACAGTGAGATTGCTGATGTAATGGACATTCATGATTCCAAAGAGAAAAAGAGGTCTGGGAAAGACGATAATAAGAAACATAGGAAGCGCCATCATAGTGATGAAGATCATGCCAATGGAAATGAGAATGATCGGTCTAAAAGATCTCATGGATCTAGCAGTGACCACAAGAAATCAAGACGGCAGGCACCTGGTCATGAATCAGATACCGAAAGCAGACATAGAAGACATAAAAGAGATCATCGGAATGGTTCTCGTAGAAGTGGTGATCACGATGAGCTAGAAGATGGGGAATTTGGCGATGTTGGGGAAAGTCGGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000375 GO:0000377 GO:0000398 GO:0003674 GO:0003676 GO:0003723 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005681 GO:0005684 GO:0005685 GO:0005737 GO:0005829 GO:0006139 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0006928 GO:0006996 GO:0007010 GO:0008150 GO:0008152 GO:0008360 GO:0008380 GO:0009987 GO:0010467 GO:0010564 GO:0016043 GO:0016070 GO:0016071 GO:0016363 GO:0016477 GO:0016604 GO:0016607 GO:0022603 GO:0022604 GO:0030532 GO:0031974 GO:0031981 GO:0032465 GO:0032991 GO:0034399 GO:0034641 GO:0040011 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044451 GO:0044464 GO:0046483 GO:0048870 GO:0050789 GO:0050793 GO:0050794 GO:0051128 GO:0051179 GO:0051302 GO:0051674 GO:0051726 GO:0065007 GO:0065008 GO:0070013 GO:0070064 GO:0071004 GO:0071010 GO:0071704 GO:0071840 GO:0090304 GO:0097159 GO:0097525 GO:0120114 GO:1901360 GO:1901363 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03040 map03040

Pfam Domains

Protein Families

FF WW

Protein Analysis

1037

Amino Acids

118.73

Weight (kDa)

6.24

Isoelectric Point (pI)

58.55

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003687)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_2g03330 FvH4_2g03330 FvH4_2g03330 FvH4_2g03330 FvH4_2g03330 FvH4_2g03330 FvH4_2g03330 FvH4_2g03361 FvH4_2g03361
malus_domestica	MD05G1105600.v1.1
prunus_persica	Prupe.8G150300_v2.0.a1 Prupe.8G150300_v2.0.a1 Prupe.8G150300_v2.0.a1 Prupe.8G150300_v2.0.a1 Prupe.8G150300_v2.0.a1 Prupe.8G150300_v2.0.a1 Prupe.8G150300_v2.0.a1 Prupe.8G150300_v2.0.a1 Prupe.8G150300_v2.0.a1 Prupe.8G150300_v2.0.a1 Prupe.8G150300_v2.0.a1 Prupe.8G150300_v2.0.a1 Prupe.8G150300_v2.0.a1 Prupe.8G150300_v2.0.a1
pyrus_communis	pycom05g10260
rosa_chinensis	RchiOBHm_Chr6g0248471
rosa_laevigata	RLG00000015152
rosa_multiflora	Rmu_sc0002553.1_g000012
rosa_roxburghii	Rroxscaffold_7G00213270
rosa_rugosa	Rorug05G0531500
rosa_samantha	Rh6AG047400 Rh6BG043700 Rh6CG040400 Rh6DG036900
rosa_wichuraiana	Rw6G004110

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	3 cut(s)	880, 1009, 2977
AccB7I	CCANNNNNTGG	3 cut(s)	263, 278, 1632
AccBSI	CCGCTC	1 cut(s)	1495
AccI	GTMKAC	2 cut(s)	28, 1403
AciI	CCGC	3 cut(s)	1495, 1927, 2014
AclWI	GGATC	4 cut(s)	59, 1440, 1938, 2950
AcoI	YGGCCR	2 cut(s)	3, 104
AcsI	RAATTY	5 cut(s)	157, 773, 1583, 1908, 3083
AcuI	CTGAAG	3 cut(s)	684, 872, 975
AcyI	GRCGYC	1 cut(s)	881
AfaI	GTAC	6 cut(s)	557, 609, 1134, 1260, 1524, 2386
AfiI	CCNNNNNNNGG	6 cut(s)	53, 263, 278, 398, 602, 1632
AflII	CTTAAG	1 cut(s)	2774
AjiI	CACGTC	1 cut(s)	1883
AjnI	CCWGG	5 cut(s)	271, 1395, 1914, 2252, 2980
AjuI	GAANNNNNNNTTGG	4 cut(s)	1189, 1221, 2312, 2344
AleI	CACNNNNGTG	1 cut(s)	2070
Alw21I	GWGCWC	1 cut(s)	1477
AlwI	GGATC	4 cut(s)	59, 1440, 1938, 2950
Ama87I	CYCGRG	1 cut(s)	861
AoxI	GGCC	8 cut(s)	3, 41, 104, 297, 403, 569, 611, 1437
ApeKI	GCWGC	8 cut(s)	244, 286, 977, 1049, 1052, 1163, 1830, 2039
ApoI	RAATTY	5 cut(s)	157, 773, 1583, 1908, 3083
AseI	ATTAAT	1 cut(s)	1455
Asp700I	GAANNNNTTC	1 cut(s)	773
AspLEI	GCGC	2 cut(s)	883, 2880
AspS9I	GGNCC	3 cut(s)	374, 404, 1437
AsuC2I	CCSGG	1 cut(s)	2355
AsuII	TTCGAA	1 cut(s)	1208
AvaI	CYCGRG	1 cut(s)	861
AvaII	GGWCC	1 cut(s)	374
AxyI	CCTNAGG	1 cut(s)	843
BaeI	ACNNNNGTAYC	2 cut(s)	954, 987
BalI	TGGCCA	1 cut(s)	5
BanI	GGYRCC	3 cut(s)	880, 1009, 2977
BbsI	GAAGAC	2 cut(s)	2271, 3022
Bbv12I	GWGCWC	1 cut(s)	1477
BbvCI	CCTCAGC	2 cut(s)	357, 1545
BbvI	GCAGC	8 cut(s)	256, 273, 964, 1036, 1064, 1150, 1842, 2026
BceAI	ACGGC	5 cut(s)	584, 626, 2070, 2204, 2987
BcgI	CGANNNNNNTGC	4 cut(s)	108, 142, 1169, 1203
BciT130I	CCWGG	5 cut(s)	273, 1397, 1916, 2254, 2982
BciVI	GTATCC	1 cut(s)	1956
BclI	TGATCA	1 cut(s)	3058
BcnI	CCSGG	1 cut(s)	2355
BfaI	CTAG	7 cut(s)	828, 869, 968, 1934, 2402, 2946, 3071
BfmI	CTRYAG	6 cut(s)	29, 551, 621, 948, 1050, 2040
BfoI	RGCGCY	2 cut(s)	884, 2881
BfrI	CTTAAG	1 cut(s)	2774
BfuI	GTATCC	1 cut(s)	1956
BglI	GCCNNNNNGGC	1 cut(s)	40
BglII	AGATCT	2 cut(s)	260, 2933
BisI	GCNGC	8 cut(s)	245, 287, 978, 1050, 1053, 1164, 1831, 2040
BlsI	GCNGC	8 cut(s)	246, 288, 979, 1051, 1054, 1165, 1832, 2041
BmcAI	AGTACT	1 cut(s)	2386
Bme1390I	CCNGG	6 cut(s)	273, 1397, 1916, 2254, 2355, 2982
Bme18I	GGWCC	1 cut(s)	374
BmeT110I	CYCGRG	1 cut(s)	861
BmgBI	CACGTC	1 cut(s)	1883
BmgT120I	GGNCC	3 cut(s)	374, 404, 1437
BmiI	GGNNCC	4 cut(s)	882, 1011, 1344, 2979
BmrFI	CCNGG	6 cut(s)	273, 1397, 1916, 2254, 2355, 2982
BmrI	ACTGGG	2 cut(s)	220, 481
BmuI	ACTGGG	2 cut(s)	220, 481
BpiI	GAAGAC	2 cut(s)	2271, 3022
BpmI	CTGGAG	4 cut(s)	579, 761, 912, 1418
Bpu10I	CCTNAGC	3 cut(s)	357, 1224, 1545
Bpu14I	TTCGAA	1 cut(s)	1208
BpuMI	CCSGG	1 cut(s)	2355
BsaBI	GATNNNNATC	2 cut(s)	1695, 2895
BsaHI	GRCGYC	1 cut(s)	881
BsaXI	ACNNNNNCTCC	6 cut(s)	618, 648, 925, 955, 1242, 1272
Bsc4I	CCNNNNNNNGG	6 cut(s)	53, 263, 278, 398, 602, 1632
Bse21I	CCTNAGG	1 cut(s)	843
Bse3DI	GCAATG	3 cut(s)	305, 588, 1764
Bse8I	GATNNNNATC	2 cut(s)	1695, 2895
BseBI	CCWGG	5 cut(s)	273, 1397, 1916, 2254, 2982
BseGI	GGATG	3 cut(s)	1288, 2221, 2401
BseJI	GATNNNNATC	2 cut(s)	1695, 2895
BseLI	CCNNNNNNNGG	6 cut(s)	53, 263, 278, 398, 602, 1632
BseMI	GCAATG	3 cut(s)	305, 588, 1764
BseMII	CTCAG	6 cut(s)	29, 371, 834, 1238, 1536, 1623
BseRI	GAGGAG	6 cut(s)	60, 198, 1961, 1964, 1972, 2456
BseXI	GCAGC	8 cut(s)	256, 273, 964, 1036, 1064, 1150, 1842, 2026
BsgI	GTGCAG	2 cut(s)	2401, 2590
BshFI	GGCC	8 cut(s)	5, 43, 106, 299, 405, 571, 613, 1439
BshNI	GGYRCC	3 cut(s)	880, 1009, 2977
BsiHKAI	GWGCWC	1 cut(s)	1477
BsiHKCI	CYCGRG	1 cut(s)	861
BsiSI	CCGG	2 cut(s)	103, 2355
BslFI	GGGAC	2 cut(s)	549, 643
BslI	CCNNNNNNNGG	6 cut(s)	53, 263, 278, 398, 602, 1632
BsmFI	GGGAC	2 cut(s)	549, 643
BsmI	GAATGC	1 cut(s)	1610
BsnI	GGCC	8 cut(s)	5, 43, 106, 299, 405, 571, 613, 1439
BsoBI	CYCGRG	1 cut(s)	861
Bsp119I	TTCGAA	1 cut(s)	1208
Bsp1286I	GDGCHC	1 cut(s)	1477
BspACI	CCGC	3 cut(s)	1495, 1927, 2014
BspANI	GGCC	8 cut(s)	5, 43, 106, 299, 405, 571, 613, 1439
BspCNI	CTCAG	6 cut(s)	28, 370, 835, 1237, 1537, 1622
BspHI	TCATGA	3 cut(s)	2191, 2821, 2986
BspLI	GGNNCC	4 cut(s)	882, 1011, 1344, 2979
BspMAI	CTGCAG	4 cut(s)	555, 625, 1054, 2044
BspPI	GGATC	4 cut(s)	59, 1440, 1938, 2950
BspQI	GCTCTTC	1 cut(s)	2022
BspT104I	TTCGAA	1 cut(s)	1208
BspT107I	GGYRCC	3 cut(s)	880, 1009, 2977
BspTI	CTTAAG	1 cut(s)	2774
BsrBI	CCGCTC	1 cut(s)	1495
BsrDI	GCAATG	3 cut(s)	305, 588, 1764
BssNI	GRCGYC	1 cut(s)	881
Bst2UI	CCWGG	5 cut(s)	273, 1397, 1916, 2254, 2982
Bst4CI	ACNGT	8 cut(s)	634, 937, 1147, 1186, 2003, 2278, 2379, 2795
Bst6I	CTCTTC	7 cut(s)	42, 427, 589, 1938, 2022, 2580, 2725
BstACI	GRCGYC	1 cut(s)	881
BstAFI	CTTAAG	1 cut(s)	2774
BstAPI	GCANNNNNTGC	2 cut(s)	241, 2623
BstBI	TTCGAA	1 cut(s)	1208
BstC8I	GCNNGC	6 cut(s)	513, 573, 1503, 1828, 2044, 2976
BstDEI	CTNAG	8 cut(s)	15, 357, 397, 843, 1224, 1545, 1609, 2526
BstENI	CCTNNNNNAGG	1 cut(s)	396
BstF5I	GGATG	3 cut(s)	1288, 2221, 2401
BstH2I	RGCGCY	2 cut(s)	884, 2881
BstHHI	GCGC	2 cut(s)	883, 2880
BstMWI	GCNNNNNNNGC	6 cut(s)	40, 241, 986, 1379, 1388, 2623
BstNI	CCWGG	5 cut(s)	273, 1397, 1916, 2254, 2982
BstNSI	RCATGY	3 cut(s)	170, 515, 2621
BstSCI	CCNGG	6 cut(s)	271, 1395, 1914, 2252, 2353, 2980
BstSFI	CTRYAG	6 cut(s)	29, 551, 621, 948, 1050, 2040
BstV1I	GCAGC	8 cut(s)	256, 273, 964, 1036, 1064, 1150, 1842, 2026
BstV2I	GAAGAC	2 cut(s)	2271, 3022
BstX2I	RGATCY	4 cut(s)	260, 1930, 2933, 2942
BstYI	RGATCY	4 cut(s)	260, 1930, 2933, 2942
Bsu36I	CCTNAGG	1 cut(s)	843
BsuI	GTATCC	1 cut(s)	1956
BsuRI	GGCC	8 cut(s)	5, 43, 106, 299, 405, 571, 613, 1439
BtgZI	GCGATG	1 cut(s)	3105
BtrI	CACGTC	1 cut(s)	1883
BtsCI	GGATG	3 cut(s)	1288, 2221, 2401
BtsI	GCAGTG	2 cut(s)	2578, 2956
BtsIMutI	CAGTG	9 cut(s)	558, 737, 1023, 1143, 1841, 2065, 2578, 2800, 2956
Cac8I	GCNNGC	6 cut(s)	513, 573, 1503, 1828, 2044, 2976
CciI	TCATGA	3 cut(s)	2191, 2821, 2986
CfoI	GCGC	2 cut(s)	883, 2880
Cfr13I	GGNCC	3 cut(s)	374, 404, 1437
CsiI	ACCWGGT	1 cut(s)	2980
Csp6I	GTAC	6 cut(s)	556, 608, 1133, 1259, 1523, 2385
CviQI	GTAC	6 cut(s)	556, 608, 1133, 1259, 1523, 2385
DdeI	CTNAG	8 cut(s)	15, 357, 397, 843, 1224, 1545, 1609, 2526
DinI	GGCGCC	1 cut(s)	882
DraI	TTTAAA	1 cut(s)	1387
EaeI	YGGCCR	2 cut(s)	3, 104
Eam1104I	CTCTTC	7 cut(s)	42, 427, 589, 1938, 2022, 2580, 2725
EarI	CTCTTC	7 cut(s)	42, 427, 589, 1938, 2022, 2580, 2725
Eco47I	GGWCC	1 cut(s)	374
Eco57I	CTGAAG	3 cut(s)	684, 872, 975
Eco81I	CCTNAGG	1 cut(s)	843
Eco88I	CYCGRG	1 cut(s)	861
EcoNI	CCTNNNNNAGG	1 cut(s)	396
EcoRI	GAATTC	2 cut(s)	773, 1583
EcoRII	CCWGG	5 cut(s)	271, 1395, 1914, 2252, 2980
EcoT22I	ATGCAT	2 cut(s)	757, 1384
EgeI	GGCGCC	1 cut(s)	882
EheI	GGCGCC	1 cut(s)	882
FalI	AAGNNNNNCTT	4 cut(s)	894, 926, 2019, 2051
FaqI	GGGAC	2 cut(s)	549, 643
FauI	CCCGC	1 cut(s)	1920
FbaI	TGATCA	1 cut(s)	3058
FblI	GTMKAC	2 cut(s)	28, 1403
Fnu4HI	GCNGC	8 cut(s)	245, 287, 978, 1050, 1053, 1164, 1831, 2040
FokI	GGATG	3 cut(s)	1295, 2228, 2408
Fsp4HI	GCNGC	8 cut(s)	245, 287, 978, 1050, 1053, 1164, 1831, 2040
FspBI	CTAG	7 cut(s)	828, 869, 968, 1934, 2402, 2946, 3071
GlaI	GCGC	2 cut(s)	882, 2879
GluI	GCNGC	8 cut(s)	245, 287, 978, 1050, 1053, 1164, 1831, 2040
GsuI	CTGGAG	4 cut(s)	579, 761, 912, 1418
HaeII	RGCGCY	2 cut(s)	884, 2881
HaeIII	GGCC	8 cut(s)	5, 43, 106, 299, 405, 571, 613, 1439
HapII	CCGG	2 cut(s)	103, 2355
HhaI	GCGC	2 cut(s)	883, 2880
Hin1I	GRCGYC	1 cut(s)	881
Hin6I	GCGC	2 cut(s)	881, 2878
HinP1I	GCGC	2 cut(s)	881, 2878
HincII	GTYRAC	1 cut(s)	1617
HindII	GTYRAC	1 cut(s)	1617
HindIII	AAGCTT	2 cut(s)	1503, 2258
HinfI	GANTC	7 cut(s)	479, 824, 1400, 1805, 2208, 2825, 2990
HpaI	GTTAAC	1 cut(s)	1617
HpaII	CCGG	2 cut(s)	103, 2355
HpyCH4III	ACNGT	8 cut(s)	634, 937, 1147, 1186, 2003, 2278, 2379, 2795
HpyCH4IV	ACGT	7 cut(s)	1287, 1555, 1768, 1882, 1993, 2461, 2467
HpyF10VI	GCNNNNNNNGC	6 cut(s)	40, 241, 986, 1379, 1388, 2623
HpyF3I	CTNAG	8 cut(s)	15, 357, 397, 843, 1224, 1545, 1609, 2526
HpySE526I	ACGT	7 cut(s)	1287, 1555, 1768, 1882, 1993, 2461, 2467
Hsp92I	GRCGYC	1 cut(s)	881
HspAI	GCGC	2 cut(s)	881, 2878
KasI	GGCGCC	1 cut(s)	880
Ksp22I	TGATCA	1 cut(s)	3058
KspAI	GTTAAC	1 cut(s)	1617
LguI	GCTCTTC	1 cut(s)	2022
LmnI	GCTCC	3 cut(s)	598, 931, 1951
Lsp1109I	GCAGC	8 cut(s)	256, 273, 964, 1036, 1064, 1150, 1842, 2026
MabI	ACCWGGT	1 cut(s)	2980
MaeI	CTAG	7 cut(s)	828, 869, 968, 1934, 2402, 2946, 3071
MaeII	ACGT	7 cut(s)	1287, 1555, 1768, 1882, 1993, 2461, 2467
MaeIII	GTNAC	9 cut(s)	249, 541, 577, 814, 931, 1168, 1288, 1811, 2951
MbiI	CCGCTC	1 cut(s)	1495
MfeI	CAATTG	1 cut(s)	506
MflI	RGATCY	4 cut(s)	260, 1930, 2933, 2942
MhlI	GDGCHC	1 cut(s)	1477
MlsI	TGGCCA	1 cut(s)	5
MluNI	TGGCCA	1 cut(s)	5
Mly113I	GGCGCC	1 cut(s)	881
MlyI	GAGTC	2 cut(s)	473, 1409
MmeI	TCCRAC	2 cut(s)	236, 1578
Mox20I	TGGCCA	1 cut(s)	5
Mph1103I	ATGCAT	2 cut(s)	757, 1384
MroXI	GAANNNNTTC	1 cut(s)	773
MscI	TGGCCA	1 cut(s)	5
MseI	TTAA	8 cut(s)	474, 1386, 1455, 1509, 1616, 2091, 2324, 2775
MslI	CAYNNNNRTG	7 cut(s)	143, 1445, 2070, 2886, 2889, 2904, 3036
Msp20I	TGGCCA	1 cut(s)	5
MspCI	CTTAAG	1 cut(s)	2774
MspI	CCGG	2 cut(s)	103, 2355
MspR9I	CCNGG	6 cut(s)	273, 1397, 1916, 2254, 2355, 2982
MunI	CAATTG	1 cut(s)	506
Mva1269I	GAATGC	1 cut(s)	1610
MvaI	CCWGG	5 cut(s)	273, 1397, 1916, 2254, 2982
MwoI	GCNNNNNNNGC	6 cut(s)	40, 241, 986, 1379, 1388, 2623
NarI	GGCGCC	1 cut(s)	881
NciI	CCSGG	1 cut(s)	2355
NlaIV	GGNNCC	4 cut(s)	882, 1011, 1344, 2979
NmuCI	GTSAC	4 cut(s)	814, 931, 1811, 2951
NsiI	ATGCAT	2 cut(s)	757, 1384
NspI	RCATGY	3 cut(s)	170, 515, 2621
NspV	TTCGAA	1 cut(s)	1208
OliI	CACNNNNGTG	1 cut(s)	2070
PaeI	GCATGC	1 cut(s)	515
PaeR7I	CTCGAG	1 cut(s)	861
PagI	TCATGA	3 cut(s)	2191, 2821, 2986
PciSI	GCTCTTC	1 cut(s)	2022
PcsI	WCGNNNNNNNCGW	1 cut(s)	1999
PctI	GAATGC	1 cut(s)	1610
PdmI	GAANNNNTTC	1 cut(s)	773
PfeI	GAWTC	5 cut(s)	824, 1805, 2208, 2825, 2990
PflMI	CCANNNNNTGG	3 cut(s)	263, 278, 1632
PfoI	TCCNGGA	2 cut(s)	1395, 1914
PkrI	GCNGC	8 cut(s)	246, 288, 979, 1051, 1054, 1165, 1832, 2041
PleI	GAGTC	2 cut(s)	473, 1408
PluTI	GGCGCC	1 cut(s)	884
PpsI	GAGTC	2 cut(s)	473, 1408
PshBI	ATTAAT	1 cut(s)	1455
Psp6I	CCWGG	5 cut(s)	271, 1395, 1914, 2252, 2980
PspGI	CCWGG	5 cut(s)	271, 1395, 1914, 2252, 2980
PspN4I	GGNNCC	4 cut(s)	882, 1011, 1344, 2979
PspPI	GGNCC	3 cut(s)	374, 404, 1437
PstI	CTGCAG	4 cut(s)	555, 625, 1054, 2044
PsuI	RGATCY	4 cut(s)	260, 1930, 2933, 2942
RsaI	GTAC	6 cut(s)	557, 609, 1134, 1260, 1524, 2386
RsaNI	GTAC	6 cut(s)	556, 608, 1133, 1259, 1523, 2385
RseI	CAYNNNNRTG	7 cut(s)	143, 1445, 2070, 2886, 2889, 2904, 3036
SapI	GCTCTTC	1 cut(s)	2022
SaqAI	TTAA	8 cut(s)	474, 1386, 1455, 1509, 1616, 2091, 2324, 2775
SatI	GCNGC	8 cut(s)	245, 287, 978, 1050, 1053, 1164, 1831, 2040
Sau96I	GGNCC	3 cut(s)	374, 404, 1437
ScaI	AGTACT	1 cut(s)	2386
SchI	GAGTC	2 cut(s)	473, 1409
ScrFI	CCNGG	6 cut(s)	273, 1397, 1916, 2254, 2355, 2982
SduI	GDGCHC	1 cut(s)	1477
SexAI	ACCWGGT	1 cut(s)	2980
SfcI	CTRYAG	6 cut(s)	29, 551, 621, 948, 1050, 2040
SfoI	GGCGCC	1 cut(s)	882
Sfr274I	CTCGAG	1 cut(s)	861
SfuI	TTCGAA	1 cut(s)	1208
SinI	GGWCC	1 cut(s)	374
SlaI	CTCGAG	1 cut(s)	861
SmiMI	CAYNNNNRTG	7 cut(s)	143, 1445, 2070, 2886, 2889, 2904, 3036
SmlI	CTYRAG	2 cut(s)	861, 2774
SmoI	CTYRAG	2 cut(s)	861, 2774
SphI	GCATGC	1 cut(s)	515
SsiI	CCGC	3 cut(s)	1495, 1927, 2014
SspDI	GGCGCC	1 cut(s)	880
SspI	AATATT	1 cut(s)	1411
SspMI	CTAG	7 cut(s)	828, 869, 968, 1934, 2402, 2946, 3071
StyD4I	CCNGG	6 cut(s)	271, 1395, 1914, 2252, 2353, 2980
TaaI	ACNGT	8 cut(s)	634, 937, 1147, 1186, 2003, 2278, 2379, 2795
TaiI	ACGT	7 cut(s)	1290, 1558, 1771, 1885, 1996, 2464, 2470
TaqI	TCGA	4 cut(s)	73, 862, 1208, 2206
TaqII	GACCGA	1 cut(s)	2913
TatI	WGTACW	2 cut(s)	555, 2384
TfiI	GAWTC	5 cut(s)	824, 1805, 2208, 2825, 2990
Tru1I	TTAA	8 cut(s)	474, 1386, 1455, 1509, 1616, 2091, 2324, 2775
Tru9I	TTAA	8 cut(s)	474, 1386, 1455, 1509, 1616, 2091, 2324, 2775
TscAI	CASTG	9 cut(s)	565, 744, 1030, 1150, 1841, 2072, 2578, 2800, 2956
TseFI	GTSAC	4 cut(s)	814, 931, 1811, 2951
TseI	GCWGC	8 cut(s)	244, 286, 977, 1049, 1052, 1163, 1830, 2039
Tsp45I	GTSAC	4 cut(s)	814, 931, 1811, 2951
TspGWI	ACGGA	1 cut(s)	174
TspRI	CASTG	9 cut(s)	565, 744, 1030, 1150, 1841, 2072, 2578, 2800, 2956
Van91I	CCANNNNNTGG	3 cut(s)	263, 278, 1632
Vha464I	CTTAAG	1 cut(s)	2774
VpaK11BI	GGWCC	1 cut(s)	374
VspI	ATTAAT	1 cut(s)	1455
XagI	CCTNNNNNAGG	1 cut(s)	396
XapI	RAATTY	5 cut(s)	157, 773, 1583, 1908, 3083
XbaI	TCTAGA	2 cut(s)	827, 1933
XceI	RCATGY	3 cut(s)	170, 515, 2621
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2526
XhoI	CTCGAG	1 cut(s)	861
XmiI	GTMKAC	2 cut(s)	28, 1403
XmnI	GAANNNNTTC	1 cut(s)	773
XspI	CTAG	7 cut(s)	828, 869, 968, 1934, 2402, 2946, 3071
ZrmI	AGTACT	1 cut(s)	2386
Zsp2I	ATGCAT	2 cut(s)	757, 1384

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.