Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr5

Orthogroup ID

OG0003687

Physical Location & Seq

Genomic Coordinates Reverse (-)

13622532 .. 13633517

Gene Structure 10986 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom05g10260.9

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2823 bp

ATGGCCAATAACCCTCAATTTTCAGGTCTACAGCCTCTTCGGCCTCCTATAGTTGGTGCTGTTGATCCTCCTCGAAGTCTGCCACCCATGTCTTTCCAATTCCGCCCAGTAGTTCCAACACCACATTCGCAGGAGTTCATTCCTGTGGCTTCTCAAAACTTTCAGCATGCTGGCAGGGGTGCTCCATTGATGAATGTTAGGCTGCCTCCCCCAAATCACCAACCCCAGTTTTCACAACCAATGCAGCATCTACCTCCAAGGTCTGGTCAGCCAGGTCATGGTATGCCTCCATCACAGGCAATTCCATTGCCAGTTGCTCAGCCTAACAGGAATTTTGCATCTGAGTTGCCTCTACCTCAGCCTAATTCACAAGCTCCAAATAACGTCATGCCTAACTTAGGTGGCCCACGAGCAGCTGTCCCTTCATCATATACTTTTGCAACTTCTTCTTATGGTCAAATACCAAGAAGTTTCAATGACTCTACCCAGTATCAGTCTATACCTCAATCGCATGCAACCAGTGTTTCATCCGAGGGACAAGTTACATCTCTGCAGCAAGCCAGTGAAAGGCCTGCTGTAACCACCTCCAATGCTCCAGAAACAGGTGTTCGACCTCCCCCGGCCGGAGGGACTGCAGCAGAGTGGAGAGAGCATACATCTGCTGATGGAAGAAAATATTATTACAACAGGAGGACAGCATTATCTACTTGGGAGAAGCCTTTGGAACTGATGACACCAATGGAGAGGGCAGATGCATCAACAAACTGGAAGGAGTTTACTAGTCCTGATGGAAGAAAGTATTACTACAACAAGGTCACCAAAGAATCAAGATGGACTATGCCTGAGGAACTTAAGTTGGCTCGAGAGCTAGTAGAAAAGGCATCTGTGAAGGAAATACAACAGGAAACGCTTGGTGATCATCATGCCACAGTCACTGTTTCTCCCTCTGTAGCTGAAGCTGATACTTCAATCGGTACTGCTCAAGTAAAATCAAGCCCTGTTTCGGTGGCACCAGTTGTTGCCACTGGTGAAGTTCAAACTGCTGTACCATCAAGAACATCTGCCTCACCTATTGTGGATTCTCCTTTGAAAGAAAATCCCAGTGAAGTTCAGACACCTGTTGCACCATCTGCCACTGTTATGGGAAGTACTGAAGCTGCTGTCACAATCAACGATGCTGGTGCAGAACCAATGGAAATATCAGCTCAGGATTTTGATAGTTCTGCTGATGGAGTTCCTGCTCAGGAGAATGAGGAAGCTAAGGATGATGCAACGGGAAAGAAGATTAATGATATTGCTGCTGAAGAAAAATCAGTTGATCGGGAACCCATACCATATGAAAATAAACTGGAGGCCAAAAACGCATTTAAAGCGCTCCTTGAGTCTACAAATATTGGTTCTGATTGGACTTGGGATCGGGCCATGAGAGTGATAATTAATGACAAGAGATATGGTGCTCTTAAAACACTTGGAGAGCGGAAGCAAGCTTTTAATGAGTTCTTGGTACAAAGGAAAAAGCAGGAGGCTGAGGAGAGGCGTATCAAACAGAAAAAGGCACGGGATGAATTCAAAACAATGCTGGAAGAATGCTCAGAGTTAACATCATCTGCAAGATGGGGAAAAGTAGAGAGCATATTTGAAAATGATGAACGTTTCAAAGCTGTTGAACGGGATAGAGATCGCAGGGAGATGTTTGAAGACTATATTGAGGAACTCCAAAAGAAAGAACGAGCAAAAGCACAGGAGGAACGAAAGCGCAATGTATTGGAATACAGGAGATTCTTGGAATCTTGTGATTTCATCAAGGCAAACATCCAGTGGAGAAAAGTTCAAGATCGTTTAGAGGCTGATGAAAGATGTTCACGTCTTGAAAAAATTGATCGTTTGGAAATTTTCCAGGAATATTTGCTGGATCTACAAAAGGAAGAGGAGGAGCAGAAGAGGATACAGAAGGAAGAATTGAGAAAGGCAGAACGTAAAAACCGCGATGAGTTCCGCAAATTAATGGAAGAACATCTCACGGAAGGCACTCTTACATTCAAAACTCAGTGGCGTGATTACTGCATGAAGGTGAAAGACCTACCTGCATATCTGGCAGTTGCATCAAACGCCTCCGGTGCTACTCCAAAAGATTTGTTTGATGATGTTGTTGAGGAACTAACGAAACAATATCAGGAGGACAAAACTCGAATAAAAGATGCAGTGAAATTGGGAAAGGTCGTGCTTACGTCAACTTGGAAGTTTGAAGACTTCAAAACTGTTTTATCAAATGATATTGGCACTCCACCGATATCAGATGCCAACTTAAAGCTGGTTTTCAATGAGTTACTGGAACGAGTGAGGGAAAGGGAGGAGAAAGAAGCTAAAAAGCTTAAACGTCATGTAGAGGACTTCTCTCATCTTTTATCTTCTATCAAGGAGATAACTCCATCTTCCAAGTGGGAGGACTACAAACCACTTCTTGAAATTAGTCAAGAGTACAGTGGCATTGGTGATGAGAACTTCTGCAAGGAGATATTTGAAAAGCATGTAATGCAACTGAAAGAACAAGCAAAAGAGGAGAGAAAAAGAAAGGAGGAAAAGGCAAGGAAGGAAAAGGAGAGAGAAGAAAGAGACAAAAGAAGGGCGAAACCAAGAAGGGAAAAAGAGGTGGAATATGAACGAGAAAACGAGGAACACAACAAGAAAGATGGAGCGGACAATGAAATAGCTGATGCAATGGATATTCACGAGTCCAAAGAGAAAAAGAGGTCAGGACATGATGATAATAGGAGACATAGGAAGCGGCATCATAGTGATGAAGATCGATGGGAATGGAAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000375 GO:0000377 GO:0000398 GO:0003674 GO:0003676 GO:0003723 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005681 GO:0005684 GO:0005685 GO:0005737 GO:0005829 GO:0006139 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0006928 GO:0006996 GO:0007010 GO:0008150 GO:0008152 GO:0008360 GO:0008380 GO:0009987 GO:0010467 GO:0010564 GO:0016043 GO:0016070 GO:0016071 GO:0016363 GO:0016477 GO:0016604 GO:0016607 GO:0022603 GO:0022604 GO:0030532 GO:0031974 GO:0031981 GO:0032465 GO:0032991 GO:0034399 GO:0034641 GO:0040011 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044451 GO:0044464 GO:0046483 GO:0048870 GO:0050789 GO:0050793 GO:0050794 GO:0051128 GO:0051179 GO:0051302 GO:0051674 GO:0051726 GO:0065007 GO:0065008 GO:0070013 GO:0070064 GO:0071004 GO:0071010 GO:0071704 GO:0071840 GO:0090304 GO:0097159 GO:0097525 GO:0120114 GO:1901360 GO:1901363 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03040 map03040

Pfam Domains

Protein Families

FF WW

Protein Analysis

941

Amino Acids

107.72

Weight (kDa)

6.1

Isoelectric Point (pI)

52.24

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003687)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_2g03330 FvH4_2g03330 FvH4_2g03330 FvH4_2g03330 FvH4_2g03330 FvH4_2g03330 FvH4_2g03330 FvH4_2g03361 FvH4_2g03361
malus_domestica	MD05G1105600.v1.1
prunus_persica	Prupe.8G150300_v2.0.a1 Prupe.8G150300_v2.0.a1 Prupe.8G150300_v2.0.a1 Prupe.8G150300_v2.0.a1 Prupe.8G150300_v2.0.a1 Prupe.8G150300_v2.0.a1 Prupe.8G150300_v2.0.a1 Prupe.8G150300_v2.0.a1 Prupe.8G150300_v2.0.a1 Prupe.8G150300_v2.0.a1 Prupe.8G150300_v2.0.a1 Prupe.8G150300_v2.0.a1 Prupe.8G150300_v2.0.a1 Prupe.8G150300_v2.0.a1
pyrus_communis	pycom05g10260
rosa_chinensis	RchiOBHm_Chr6g0248471
rosa_laevigata	RLG00000015152
rosa_multiflora	Rmu_sc0002553.1_g000012
rosa_roxburghii	Rroxscaffold_7G00213270
rosa_rugosa	Rorug05G0531500
rosa_samantha	Rh6AG047400 Rh6BG043700 Rh6CG040400 Rh6DG036900
rosa_wichuraiana	Rw6G004110

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	2092
AccB1I	GGYRCC	1 cut(s)	1009
AccB7I	CCANNNNNTGG	2 cut(s)	263, 278
AccBSI	CCGCTC	2 cut(s)	1477, 2696
AccI	GTMKAC	2 cut(s)	28, 1385
AccII	CGCG	1 cut(s)	1986
AciI	CCGC	6 cut(s)	103, 1477, 1984, 1996, 2696, 2785
AclI	AACGTT	1 cut(s)	1651
AclWI	GGATC	3 cut(s)	59, 1422, 1920
AcoI	YGGCCR	2 cut(s)	3, 621
AcsI	RAATTY	3 cut(s)	331, 1565, 1890
AcuI	CTGAAG	3 cut(s)	975, 1173, 1323
AfaI	GTAC	5 cut(s)	976, 1047, 1150, 1506, 2480
AfeI	AGCGCT	1 cut(s)	1374
AfiI	CCNNNNNNNGG	9 cut(s)	53, 263, 278, 398, 567, 602, 623, 626, 1003
AflII	CTTAAG	1 cut(s)	851
AhlI	ACTAGT	1 cut(s)	779
AjiI	CACGTC	1 cut(s)	1865
AjnI	CCWGG	2 cut(s)	271, 1896
AjuI	GAANNNNNNNTTGG	2 cut(s)	109, 141
Alw21I	GWGCWC	2 cut(s)	184, 1459
Alw26I	GTCTC	2 cut(s)	2607, 2767
AlwI	GGATC	3 cut(s)	59, 1422, 1920
AlwNI	CAGNNNCTG	1 cut(s)	935
Ama87I	CYCGRG	1 cut(s)	861
Aor51HI	AGCGCT	1 cut(s)	1374
AoxI	GGCC	7 cut(s)	3, 41, 403, 569, 621, 1353, 1419
ApeKI	GCWGC	7 cut(s)	202, 244, 413, 553, 635, 1157, 1298
ApoI	RAATTY	3 cut(s)	331, 1565, 1890
AseI	ATTAAT	3 cut(s)	1287, 1437, 2003
AspLEI	GCGC	2 cut(s)	1375, 1758
AspS9I	GGNCC	2 cut(s)	404, 1419
AsuC2I	CCSGG	1 cut(s)	620
AsuHPI	GGTGA	7 cut(s)	209, 808, 926, 1040, 1059, 2083, 2504
AvaI	CYCGRG	1 cut(s)	861
AxyI	CCTNAGG	1 cut(s)	843
BaeI	ACNNNNGTAYC	2 cut(s)	1029, 1062
BalI	TGGCCA	1 cut(s)	5
BanI	GGYRCC	1 cut(s)	1009
BauI	CACGAG	2 cut(s)	408, 2729
BbsI	GAAGAC	2 cut(s)	1704, 2253
Bbv12I	GWGCWC	2 cut(s)	184, 1459
BbvCI	CCTCAGC	2 cut(s)	357, 1527
BbvI	GCAGC	7 cut(s)	189, 256, 425, 565, 647, 1144, 1285
BcgI	CGANNNNNNTGC	2 cut(s)	1163, 1197
BciT130I	CCWGG	2 cut(s)	273, 1898
BciVI	GTATCC	1 cut(s)	1938
BclI	TGATCA	1 cut(s)	916
BcnI	CCSGG	1 cut(s)	620
BcoDI	GTCTC	2 cut(s)	2607, 2767
BcuI	ACTAGT	1 cut(s)	779
BfaI	CTAG	2 cut(s)	780, 869
BfmI	CTRYAG	5 cut(s)	29, 48, 551, 633, 948
BfoI	RGCGCY	1 cut(s)	1376
BfrI	CTTAAG	1 cut(s)	851
BfuAI	ACCTGC	1 cut(s)	2092
BfuI	GTATCC	1 cut(s)	1938
BglI	GCCNNNNNGGC	1 cut(s)	40
BisI	GCNGC	8 cut(s)	203, 245, 414, 554, 636, 1158, 1299, 2786
BlpI	GCTNAGC	1 cut(s)	318
BlsI	GCNGC	8 cut(s)	204, 246, 415, 555, 637, 1159, 1300, 2787
BmcAI	AGTACT	1 cut(s)	1150
Bme1390I	CCNGG	3 cut(s)	273, 620, 1898
BmeT110I	CYCGRG	1 cut(s)	861
BmgBI	CACGTC	1 cut(s)	1865
BmgT120I	GGNCC	2 cut(s)	404, 1419
BmiI	GGNNCC	2 cut(s)	1011, 1326
BmrFI	CCNGG	3 cut(s)	273, 620, 1898
BmrI	ACTGGG	4 cut(s)	101, 220, 481, 1095
BmuI	ACTGGG	4 cut(s)	101, 220, 481, 1095
BpiI	GAAGAC	2 cut(s)	1704, 2253
BplI	GAGNNNNNCTC	2 cut(s)	2378, 2410
BpmI	CTGGAG	2 cut(s)	579, 1370
Bpu10I	CCTNAGC	5 cut(s)	357, 1206, 1242, 1260, 1527
Bpu1102I	GCTNAGC	1 cut(s)	318
BpuEI	CTTGAG	2 cut(s)	966, 1400
BpuMI	CCSGG	1 cut(s)	620
Bsa29I	ATCGAT	1 cut(s)	2806
BsaBI	GATNNNNATC	2 cut(s)	1677, 2802
BsaJI	CCNNGG	3 cut(s)	257, 531, 618
BsaWI	WCCGGW	1 cut(s)	2114
BsaXI	ACNNNNNCTCC	2 cut(s)	925, 955
Bsc4I	CCNNNNNNNGG	9 cut(s)	53, 263, 278, 398, 567, 602, 623, 626, 1003
Bse21I	CCTNAGG	1 cut(s)	843
Bse3DI	GCAATG	3 cut(s)	305, 1765, 2724
Bse8I	GATNNNNATC	2 cut(s)	1677, 2802
BseBI	CCWGG	2 cut(s)	273, 1898
BseCI	ATCGAT	1 cut(s)	2806
BseDI	CCNNGG	3 cut(s)	257, 531, 618
BseGI	GGATG	4 cut(s)	527, 1270, 1567, 1812
BseJI	GATNNNNATC	2 cut(s)	1677, 2802
BseLI	CCNNNNNNNGG	9 cut(s)	53, 263, 278, 398, 567, 602, 623, 626, 1003
BseMI	GCAATG	3 cut(s)	305, 1765, 2724
BseMII	CTCAG	9 cut(s)	332, 333, 371, 834, 1220, 1256, 1518, 1605, 2060
BseRI	GAGGAG	6 cut(s)	60, 1544, 1943, 1946, 2366, 2573
BseX3I	CGGCCG	1 cut(s)	621
BseXI	GCAGC	7 cut(s)	189, 256, 425, 565, 647, 1144, 1285
BsgI	GTGCAG	1 cut(s)	1203
Bsh1236I	CGCG	1 cut(s)	1986
Bsh1285I	CGRYCG	1 cut(s)	624
BshFI	GGCC	7 cut(s)	5, 43, 405, 571, 623, 1355, 1421
BshNI	GGYRCC	1 cut(s)	1009
BshVI	ATCGAT	1 cut(s)	2806
BsiEI	CGRYCG	1 cut(s)	624
BsiHKAI	GWGCWC	2 cut(s)	184, 1459
BsiHKCI	CYCGRG	1 cut(s)	861
BsiSI	CCGG	3 cut(s)	620, 624, 2115
BslFI	GGGAC	3 cut(s)	404, 549, 643
BslI	CCNNNNNNNGG	9 cut(s)	53, 263, 278, 398, 567, 602, 623, 626, 1003
BsmAI	GTCTC	2 cut(s)	2607, 2767
BsmFI	GGGAC	3 cut(s)	404, 549, 643
BsmI	GAATGC	1 cut(s)	1592
BsnI	GGCC	7 cut(s)	5, 43, 405, 571, 623, 1355, 1421
BsoBI	CYCGRG	1 cut(s)	861
Bsp1286I	GDGCHC	2 cut(s)	184, 1459
Bsp143I	GATC	9 cut(s)	64, 916, 1318, 1414, 1678, 1834, 1879, 1912, 2803
Bsp1720I	GCTNAGC	1 cut(s)	318
BspACI	CCGC	6 cut(s)	103, 1477, 1984, 1996, 2696, 2785
BspANI	GGCC	7 cut(s)	5, 43, 405, 571, 623, 1355, 1421
BspCNI	CTCAG	9 cut(s)	331, 334, 370, 835, 1219, 1255, 1519, 1604, 2059
BspDI	ATCGAT	1 cut(s)	2806
BspFNI	CGCG	1 cut(s)	1986
BspLI	GGNNCC	2 cut(s)	1011, 1326
BspMAI	CTGCAG	2 cut(s)	555, 637
BspMI	ACCTGC	1 cut(s)	2092
BspPI	GGATC	3 cut(s)	59, 1422, 1920
BspT107I	GGYRCC	1 cut(s)	1009
BspTI	CTTAAG	1 cut(s)	851
BsrBI	CCGCTC	2 cut(s)	1477, 2696
BsrDI	GCAATG	3 cut(s)	305, 1765, 2724
BssECI	CCNNGG	3 cut(s)	257, 531, 618
BssMI	GATC	9 cut(s)	64, 916, 1318, 1414, 1678, 1834, 1879, 1912, 2803
BssSI	CACGAG	2 cut(s)	408, 2729
BssT1I	CCWWGG	1 cut(s)	257
Bst2BI	CACGAG	2 cut(s)	408, 2729
Bst2UI	CCWGG	2 cut(s)	273, 1898
Bst4CI	ACNGT	5 cut(s)	931, 937, 1138, 2260, 2483
Bst6I	CTCTTC	3 cut(s)	42, 1920, 1934
BstAFI	CTTAAG	1 cut(s)	851
BstAPI	GCANNNNNTGC	2 cut(s)	1130, 2533
BstC8I	GCNNGC	6 cut(s)	168, 172, 513, 558, 573, 1485
BstEII	GGTNACC	1 cut(s)	814
BstENI	CCTNNNNNAGG	1 cut(s)	396
BstF5I	GGATG	4 cut(s)	527, 1270, 1567, 1812
BstFNI	CGCG	1 cut(s)	1986
BstH2I	RGCGCY	1 cut(s)	1376
BstHHI	GCGC	2 cut(s)	1375, 1758
BstKTI	GATC	9 cut(s)	67, 919, 1321, 1417, 1681, 1837, 1882, 1915, 2806
BstMAI	GTCTC	2 cut(s)	2607, 2767
BstMBI	GATC	9 cut(s)	64, 916, 1318, 1414, 1678, 1834, 1879, 1912, 2803
BstMCI	CGRYCG	1 cut(s)	624
BstMWI	GCNNNNNNNGC	8 cut(s)	40, 1130, 1361, 1370, 2093, 2108, 2117, 2533
BstNI	CCWGG	2 cut(s)	273, 1898
BstNSI	RCATGY	3 cut(s)	170, 515, 2531
BstPI	GGTNACC	1 cut(s)	814
BstSCI	CCNGG	3 cut(s)	271, 618, 1896
BstSFI	CTRYAG	5 cut(s)	29, 48, 551, 633, 948
BstUI	CGCG	1 cut(s)	1986
BstV1I	GCAGC	7 cut(s)	189, 256, 425, 565, 647, 1144, 1285
BstV2I	GAAGAC	2 cut(s)	1704, 2253
BstX2I	RGATCY	1 cut(s)	1912
BstXI	CCANNNNNNTGG	1 cut(s)	1141
BstYI	RGATCY	1 cut(s)	1912
BstZI	CGGCCG	1 cut(s)	621
Bsu15I	ATCGAT	1 cut(s)	2806
Bsu36I	CCTNAGG	1 cut(s)	843
BsuI	GTATCC	1 cut(s)	1938
BsuRI	GGCC	7 cut(s)	5, 43, 405, 571, 623, 1355, 1421
BsuTUI	ATCGAT	1 cut(s)	2806
BtgZI	GCGATG	1 cut(s)	2001
BtrI	CACGTC	1 cut(s)	1865
BtsCI	GGATG	4 cut(s)	527, 1270, 1567, 1812
BtsI	GCAGTG	1 cut(s)	2208
BveI	ACCTGC	1 cut(s)	2092
Cac8I	GCNNGC	6 cut(s)	168, 172, 513, 558, 573, 1485
CaiI	CAGNNNCTG	1 cut(s)	935
CfoI	GCGC	2 cut(s)	1375, 1758
Cfr13I	GGNCC	2 cut(s)	404, 1419
ClaI	ATCGAT	1 cut(s)	2806
Csp6I	GTAC	5 cut(s)	975, 1046, 1149, 1505, 2479
CviQI	GTAC	5 cut(s)	975, 1046, 1149, 1505, 2479
DpnI	GATC	9 cut(s)	66, 918, 1320, 1416, 1680, 1836, 1881, 1914, 2805
DpnII	GATC	9 cut(s)	64, 916, 1318, 1414, 1678, 1834, 1879, 1912, 2803
DraI	TTTAAA	1 cut(s)	1369
EaeI	YGGCCR	2 cut(s)	3, 621
EagI	CGGCCG	1 cut(s)	621
Eam1104I	CTCTTC	3 cut(s)	42, 1920, 1934
EarI	CTCTTC	3 cut(s)	42, 1920, 1934
EciI	GGCGGA	1 cut(s)	92
EclXI	CGGCCG	1 cut(s)	621
Eco130I	CCWWGG	1 cut(s)	257
Eco147I	AGGCCT	1 cut(s)	571
Eco32I	GATATC	1 cut(s)	2292
Eco47III	AGCGCT	1 cut(s)	1374
Eco52I	CGGCCG	1 cut(s)	621
Eco57I	CTGAAG	3 cut(s)	975, 1173, 1323
Eco81I	CCTNAGG	1 cut(s)	843
Eco88I	CYCGRG	1 cut(s)	861
Eco91I	GGTNACC	1 cut(s)	814
EcoNI	CCTNNNNNAGG	1 cut(s)	396
EcoO65I	GGTNACC	1 cut(s)	814
EcoRI	GAATTC	1 cut(s)	1565
EcoRII	CCWGG	2 cut(s)	271, 1896
EcoRV	GATATC	1 cut(s)	2292
EcoT14I	CCWWGG	1 cut(s)	257
EcoT22I	ATGCAT	1 cut(s)	757
ErhI	CCWWGG	1 cut(s)	257
FalI	AAGNNNNNCTT	4 cut(s)	1362, 1394, 2016, 2048
FaqI	GGGAC	3 cut(s)	404, 549, 643
FauNDI	CATATG	1 cut(s)	1336
FbaI	TGATCA	1 cut(s)	916
FblI	GTMKAC	2 cut(s)	28, 1385
Fnu4HI	GCNGC	8 cut(s)	203, 245, 414, 554, 636, 1158, 1299, 2786
FokI	GGATG	4 cut(s)	514, 1277, 1574, 1799
Fsp4HI	GCNGC	8 cut(s)	203, 245, 414, 554, 636, 1158, 1299, 2786
FspBI	CTAG	2 cut(s)	780, 869
GlaI	GCGC	2 cut(s)	1374, 1757
GluI	GCNGC	8 cut(s)	203, 245, 414, 554, 636, 1158, 1299, 2786
GsuI	CTGGAG	2 cut(s)	579, 1370
HaeII	RGCGCY	1 cut(s)	1376
HaeIII	GGCC	7 cut(s)	5, 43, 405, 571, 623, 1355, 1421
HapII	CCGG	3 cut(s)	620, 624, 2115
HhaI	GCGC	2 cut(s)	1375, 1758
Hin6I	GCGC	2 cut(s)	1373, 1756
HinP1I	GCGC	2 cut(s)	1373, 1756
HincII	GTYRAC	2 cut(s)	1599, 2232
HindII	GTYRAC	2 cut(s)	1599, 2232
HindIII	AAGCTT	2 cut(s)	1485, 2369
HinfI	GANTC	7 cut(s)	479, 824, 1079, 1382, 1779, 1787, 2732
HpaI	GTTAAC	1 cut(s)	1599
HpaII	CCGG	3 cut(s)	620, 624, 2115
HphI	GGTGA	7 cut(s)	209, 808, 926, 1040, 1059, 2083, 2504
Hpy166II	GTNNAC	6 cut(s)	29, 777, 1386, 1599, 1862, 2232
Hpy188I	TCNGA	6 cut(s)	343, 532, 1113, 1402, 1594, 2296
Hpy8I	GTNNAC	6 cut(s)	29, 777, 1386, 1599, 1862, 2232
HpyAV	CCTTC	9 cut(s)	432, 763, 883, 1945, 2018, 2062, 2584, 2616, 2631
HpyCH4III	ACNGT	5 cut(s)	931, 937, 1138, 2260, 2483
HpyCH4IV	ACGT	6 cut(s)	384, 1651, 1864, 1975, 2228, 2377
HpyF10VI	GCNNNNNNNGC	8 cut(s)	40, 1130, 1361, 1370, 2093, 2108, 2117, 2533
HpySE526I	ACGT	6 cut(s)	384, 1651, 1864, 1975, 2228, 2377
HspAI	GCGC	2 cut(s)	1373, 1756
Ksp22I	TGATCA	1 cut(s)	916
KspAI	GTTAAC	1 cut(s)	1599
Kzo9I	GATC	9 cut(s)	64, 916, 1318, 1414, 1678, 1834, 1879, 1912, 2803
LmnI	GCTCC	6 cut(s)	187, 379, 598, 1380, 1933, 2693
Lsp1109I	GCAGC	7 cut(s)	189, 256, 425, 565, 647, 1144, 1285
MaeI	CTAG	2 cut(s)	780, 869
MaeII	ACGT	6 cut(s)	384, 1651, 1864, 1975, 2228, 2377
MaeIII	GTNAC	6 cut(s)	541, 577, 814, 931, 1162, 2325
MalI	GATC	9 cut(s)	66, 918, 1320, 1416, 1680, 1836, 1881, 1914, 2805
MbiI	CCGCTC	2 cut(s)	1477, 2696
MboI	GATC	9 cut(s)	64, 916, 1318, 1414, 1678, 1834, 1879, 1912, 2803
MflI	RGATCY	1 cut(s)	1912
MhlI	GDGCHC	2 cut(s)	184, 1459
MlsI	TGGCCA	1 cut(s)	5
MluNI	TGGCCA	1 cut(s)	5
MlyI	GAGTC	3 cut(s)	473, 1391, 2741
MmeI	TCCRAC	1 cut(s)	140
Mox20I	TGGCCA	1 cut(s)	5
Mph1103I	ATGCAT	1 cut(s)	757
MscI	TGGCCA	1 cut(s)	5
MslI	CAYNNNNRTG	6 cut(s)	143, 1139, 1427, 2069, 2793, 2796
Msp20I	TGGCCA	1 cut(s)	5
MspA1I	CMGCKG	1 cut(s)	416
MspCI	CTTAAG	1 cut(s)	851
MspI	CCGG	3 cut(s)	620, 624, 2115
MspR9I	CCNGG	3 cut(s)	273, 620, 1898
Mva1269I	GAATGC	1 cut(s)	1592
MvaI	CCWGG	2 cut(s)	273, 1898
MvnI	CGCG	1 cut(s)	1986
MwoI	GCNNNNNNNGC	8 cut(s)	40, 1130, 1361, 1370, 2093, 2108, 2117, 2533
NciI	CCSGG	1 cut(s)	620
NdeI	CATATG	1 cut(s)	1336
NdeII	GATC	9 cut(s)	64, 916, 1318, 1414, 1678, 1834, 1879, 1912, 2803
NlaIV	GGNNCC	2 cut(s)	1011, 1326
NmuCI	GTSAC	3 cut(s)	814, 931, 1162
NsiI	ATGCAT	1 cut(s)	757
NspI	RCATGY	3 cut(s)	170, 515, 2531
PaeI	GCATGC	2 cut(s)	170, 515
PaeR7I	CTCGAG	1 cut(s)	861
PceI	AGGCCT	1 cut(s)	571
PctI	GAATGC	1 cut(s)	1592
PfeI	GAWTC	4 cut(s)	824, 1079, 1779, 1787
PflMI	CCANNNNNTGG	2 cut(s)	263, 278
PfoI	TCCNGGA	1 cut(s)	1896
PkrI	GCNGC	8 cut(s)	204, 246, 415, 555, 637, 1159, 1300, 2787
PleI	GAGTC	3 cut(s)	473, 1390, 2740
PpsI	GAGTC	3 cut(s)	473, 1390, 2740
PshBI	ATTAAT	3 cut(s)	1287, 1437, 2003
Psp1406I	AACGTT	1 cut(s)	1651
Psp6I	CCWGG	2 cut(s)	271, 1896
PspEI	GGTNACC	1 cut(s)	814
PspGI	CCWGG	2 cut(s)	271, 1896
PspN4I	GGNNCC	2 cut(s)	1011, 1326
PspPI	GGNCC	2 cut(s)	404, 1419
PstI	CTGCAG	2 cut(s)	555, 637
PstNI	CAGNNNCTG	1 cut(s)	935
PsuI	RGATCY	1 cut(s)	1912
PvuII	CAGCTG	1 cut(s)	416
RsaI	GTAC	5 cut(s)	976, 1047, 1150, 1506, 2480
RsaNI	GTAC	5 cut(s)	975, 1046, 1149, 1505, 2479
RseI	CAYNNNNRTG	6 cut(s)	143, 1139, 1427, 2069, 2793, 2796
SatI	GCNGC	8 cut(s)	203, 245, 414, 554, 636, 1158, 1299, 2786
Sau3AI	GATC	9 cut(s)	64, 916, 1318, 1414, 1678, 1834, 1879, 1912, 2803
Sau96I	GGNCC	2 cut(s)	404, 1419
ScaI	AGTACT	1 cut(s)	1150
SchI	GAGTC	3 cut(s)	473, 1391, 2741
ScrFI	CCNGG	3 cut(s)	273, 620, 1898
SduI	GDGCHC	2 cut(s)	184, 1459
SfcI	CTRYAG	5 cut(s)	29, 48, 551, 633, 948
Sfr274I	CTCGAG	1 cut(s)	861
SlaI	CTCGAG	1 cut(s)	861
SmiMI	CAYNNNNRTG	6 cut(s)	143, 1139, 1427, 2069, 2793, 2796
SmlI	CTYRAG	4 cut(s)	851, 861, 981, 1379
SmoI	CTYRAG	4 cut(s)	851, 861, 981, 1379
SpeI	ACTAGT	1 cut(s)	779
SphI	GCATGC	2 cut(s)	170, 515
SseBI	AGGCCT	1 cut(s)	571
SsiI	CCGC	6 cut(s)	103, 1477, 1984, 1996, 2696, 2785
SspI	AATATT	3 cut(s)	677, 1393, 1904
SspMI	CTAG	2 cut(s)	780, 869
StuI	AGGCCT	1 cut(s)	571
StyD4I	CCNGG	3 cut(s)	271, 618, 1896
StyI	CCWWGG	1 cut(s)	257
TaaI	ACNGT	5 cut(s)	931, 937, 1138, 2260, 2483
TaiI	ACGT	6 cut(s)	387, 1654, 1867, 1978, 2231, 2380
TaqI	TCGA	5 cut(s)	73, 610, 862, 2188, 2806
TatI	WGTACW	2 cut(s)	1148, 2478
TauI	GCSGC	1 cut(s)	2788
TfiI	GAWTC	4 cut(s)	824, 1079, 1779, 1787
TseFI	GTSAC	3 cut(s)	814, 931, 1162
TseI	GCWGC	7 cut(s)	202, 244, 413, 553, 635, 1157, 1298
Tsp45I	GTSAC	3 cut(s)	814, 931, 1162
TspGWI	ACGGA	1 cut(s)	2036
Van91I	CCANNNNNTGG	2 cut(s)	263, 278
Vha464I	CTTAAG	1 cut(s)	851
VspI	ATTAAT	3 cut(s)	1287, 1437, 2003
XagI	CCTNNNNNAGG	1 cut(s)	396
XapI	RAATTY	3 cut(s)	331, 1565, 1890
XceI	RCATGY	3 cut(s)	170, 515, 2531
XcmI	CCANNNNNNNNNTGG	2 cut(s)	2308, 2436
XhoI	CTCGAG	1 cut(s)	861
XmiI	GTMKAC	2 cut(s)	28, 1385
XspI	CTAG	2 cut(s)	780, 869
ZrmI	AGTACT	1 cut(s)	1150
Zsp2I	ATGCAT	1 cut(s)	757

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.