Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp08

Orthogroup ID

OG0011375

Physical Location & Seq

Genomic Coordinates Forward (+)

16789729 .. 16792261

Gene Structure 2533 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.8G157600.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 975 bp

ATGGCGTTGCCAGCGCTGCCCGAAGTAGAGCTTCGAGAACTGGGCAACACAGGCCTCAAGCTCAGCTGCGTCGGCTTCGGCGCCTCGCCTCTGGGCAACGTCTTCGGTCCCGTCTCTGATGACGAAGCCATCGGCTCCGTTCGCGAAGCCTTTCGTCGTGGCATCAACTTCTTCGACACCTCTCCGTACTATGGTGGGACTTTGTCAGAGAAGGTGCTTGGTAAAACACTAAAAGCTCTGGGCGTCCCAAGGAGTGAGTACATTGTTGCAACCAAGTGTGGGCGCTATGCTGACGGTTTTGATTTCAGTGCGGATAGAGTGACTAAGAGCATTGATGAGAGCTTGGAAAGGTTGCAGCTGGATTACGTTGATATACTGCAATGCCATGACATTGAATTTGGGTCTCTAGATCAGATTATCAATGAAACAATCCCTGCCCTAAAGAAACTCAAGGAAACAGGGAAGATTCGTTTAATTGGTATTACAGGACTTCCATTGGGAATTTTCACATACGTTCTCGATCGGGTACCACCTGGCACAGTGGACGTGGTTCTGTCATATTGCCACTATGGTATTAATGATTCAGCTTTGGAGGATTTATTACCATACCTAAAGAGCAAAGGTGTTGGTGTCATTAGTGCTTCTCCACTTGCTATGGGCCTTCTAACCGAGAGTGGTCCTCCAGAATGGCACCCAGCATCTGCTGAATTGAAGTCTGCGTGCCGAGCTGCTGCTGTCTATTGTAAAGAGAGAGGGAAGAACATTTCAAAGTTAGCTATGCAATACAGTTTGTCCAACAAGGATATCTCTTCGGTGCTTGTTGGCATGAACTCCATTAAACAGGTTGAGGAAAATGTTGCTGCTGCTGTGGAGCTTGAAACTGTTGGGAAGGATGAAAAAACTCTAGCAGAGGTTGAAGCTATTCTGAAACCTGTGAAGAACCAGACATGGTCTAGTGGAATCCAGCAGAGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005975 GO:0005996 GO:0006082 GO:0006732 GO:0006766 GO:0006767 GO:0008150 GO:0008152 GO:0009058 GO:0009108 GO:0009110 GO:0009987 GO:0010349 GO:0016051 GO:0016053 GO:0016491 GO:0016614 GO:0016616 GO:0016645 GO:0016646 GO:0018130 GO:0019752 GO:0019852 GO:0019853 GO:0042364 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044281 GO:0044283 GO:0044424 GO:0044444 GO:0044464 GO:0045290 GO:0046364 GO:0046394 GO:0046483 GO:0051186 GO:0051188 GO:0055114 GO:0070484 GO:0070485 GO:0071704 GO:1901334 GO:1901336 GO:1901360 GO:1901362 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00053 ko01100 ko01110 map00053 map01100 map01110

Pfam Domains

Protein Families

Aldo_ket_red

Protein Analysis

325

Amino Acids

34.95

Weight (kDa)

5.23

Isoelectric Point (pI)

33.73

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0011375)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G33670
fragaria_vesca	FvH4_2g02330 FvH4_2g02330
malus_domestica	MD05G1113100.v1.1 MD10G1115600.v1.1
prunus_persica	Prupe.8G157600_v2.0.a1 Prupe.8G157600_v2.0.a1
pyrus_communis	pycom05g10830 pycom10g10010
rosa_chinensis	RchiOBHm_Chr6g0246091
rosa_laevigata	RLG00000015271
rosa_multiflora	Rmu_sc0004042.1_g000009 Rmu_sc0009451.1_g000013
rosa_roxburghii	Rroxscaffold_7G00214970
rosa_rugosa	Rorug05G0519000
rosa_samantha	Rh6AG033300 Rh6BG028800 Rh6CG029000 Rh6DG028100
rosa_wichuraiana	Rw6G002680

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	526
AccB1I	GGYRCC	3 cut(s)	80, 526, 690
AccII	CGCG	1 cut(s)	144
AciI	CCGC	1 cut(s)	311
AcsI	RAATTY	2 cut(s)	395, 501
AcyI	GRCGYC	2 cut(s)	81, 243
AfaI	GTAC	3 cut(s)	188, 260, 528
AfeI	AGCGCT	1 cut(s)	15
AfiI	CCNNNNNNNGG	2 cut(s)	191, 279
AgsI	TTSAA	5 cut(s)	395, 712, 768, 878, 917
AjiI	CACGTC	1 cut(s)	547
AjnI	CCWGG	1 cut(s)	532
Alw26I	GTCTC	2 cut(s)	118, 408
AlwNI	CAGNNNCTG	1 cut(s)	701
Aor51HI	AGCGCT	1 cut(s)	15
AoxI	GGCC	2 cut(s)	52, 658
ApeKI	GCWGC	7 cut(s)	16, 66, 355, 728, 731, 860, 863
ApoI	RAATTY	2 cut(s)	395, 501
ArsI	GACNNNNNNTTYG	2 cut(s)	380, 412
AseI	ATTAAT	1 cut(s)	576
Asp700I	GAANNNNTTC	2 cut(s)	150, 921
Asp718I	GGTACC	1 cut(s)	526
AspLEI	GCGC	3 cut(s)	16, 83, 285
AspS9I	GGNCC	3 cut(s)	107, 658, 677
AvaII	GGWCC	2 cut(s)	107, 677
BanI	GGYRCC	3 cut(s)	80, 526, 690
BbsI	GAAGAC	1 cut(s)	94
BbvI	GCAGC	7 cut(s)	3, 53, 367, 715, 718, 847, 850
BccI	CCATC	1 cut(s)	137
BcgI	CGANNNNNNTGC	2 cut(s)	85, 119
BciT130I	CCWGG	1 cut(s)	534
BcoDI	GTCTC	2 cut(s)	118, 408
BfaI	CTAG	3 cut(s)	407, 905, 954
BfoI	RGCGCY	3 cut(s)	17, 84, 286
BisI	GCNGC	7 cut(s)	17, 67, 356, 729, 732, 861, 864
BlpI	GCTNAGC	1 cut(s)	62
BlsI	GCNGC	7 cut(s)	18, 68, 357, 730, 733, 862, 865
Bme1390I	CCNGG	1 cut(s)	534
Bme18I	GGWCC	2 cut(s)	107, 677
BmgBI	CACGTC	1 cut(s)	547
BmgT120I	GGNCC	3 cut(s)	107, 658, 677
BmiI	GGNNCC	5 cut(s)	82, 109, 136, 528, 692
BmrFI	CCNGG	1 cut(s)	534
BmrI	ACTGGG	1 cut(s)	50
BmsI	GCATC	2 cut(s)	171, 707
BmuI	ACTGGG	1 cut(s)	50
BpiI	GAAGAC	1 cut(s)	94
BplI	GAGNNNNNCTC	2 cut(s)	664, 696
BpmI	CTGGAG	1 cut(s)	666
Bpu1102I	GCTNAGC	1 cut(s)	62
BpuEI	CTTGAG	2 cut(s)	41, 434
BsaHI	GRCGYC	2 cut(s)	81, 243
BsaI	GGTCTC	1 cut(s)	408
BsaJI	CCNNGG	1 cut(s)	248
Bsc4I	CCNNNNNNNGG	2 cut(s)	191, 279
Bse1I	ACTGG	1 cut(s)	45
Bse3DI	GCAATG	1 cut(s)	386
BseBI	CCWGG	1 cut(s)	534
BseDI	CCNNGG	1 cut(s)	248
BseGI	GGATG	1 cut(s)	898
BseLI	CCNNNNNNNGG	2 cut(s)	191, 279
BseMI	GCAATG	1 cut(s)	386
BseMII	CTCAG	1 cut(s)	76
BseNI	ACTGG	1 cut(s)	45
BseXI	GCAGC	7 cut(s)	3, 53, 367, 715, 718, 847, 850
BseYI	CCCAGC	1 cut(s)	694
Bsh1236I	CGCG	1 cut(s)	144
Bsh1285I	CGRYCG	1 cut(s)	523
BshFI	GGCC	2 cut(s)	54, 660
BshNI	GGYRCC	3 cut(s)	80, 526, 690
BsiEI	CGRYCG	1 cut(s)	523
BslFI	GGGAC	3 cut(s)	93, 211, 230
BslI	CCNNNNNNNGG	2 cut(s)	191, 279
BsmAI	GTCTC	2 cut(s)	118, 408
BsmBI	CGTCTC	1 cut(s)	118
BsmFI	GGGAC	3 cut(s)	93, 211, 230
BsnI	GGCC	2 cut(s)	54, 660
Bso31I	GGTCTC	1 cut(s)	408
Bsp143I	GATC	2 cut(s)	409, 520
Bsp1720I	GCTNAGC	1 cut(s)	62
Bsp68I	TCGCGA	1 cut(s)	144
BspACI	CCGC	1 cut(s)	311
BspANI	GGCC	2 cut(s)	54, 660
BspCNI	CTCAG	1 cut(s)	75
BspFNI	CGCG	1 cut(s)	144
BspLI	GGNNCC	5 cut(s)	82, 109, 136, 528, 692
BspT107I	GGYRCC	3 cut(s)	80, 526, 690
BspTNI	GGTCTC	1 cut(s)	408
BsrDI	GCAATG	1 cut(s)	386
BsrI	ACTGG	1 cut(s)	45
BssECI	CCNNGG	1 cut(s)	248
BssMI	GATC	2 cut(s)	409, 520
BssNI	GRCGYC	2 cut(s)	81, 243
BssT1I	CCWWGG	1 cut(s)	248
Bst2UI	CCWGG	1 cut(s)	534
Bst4CI	ACNGT	4 cut(s)	296, 541, 788, 883
Bst6I	CTCTTC	1 cut(s)	814
BstACI	GRCGYC	2 cut(s)	81, 243
BstC8I	GCNNGC	2 cut(s)	12, 721
BstDEI	CTNAG	2 cut(s)	62, 324
BstF5I	GGATG	1 cut(s)	898
BstFNI	CGCG	1 cut(s)	144
BstH2I	RGCGCY	3 cut(s)	17, 84, 286
BstHHI	GCGC	3 cut(s)	16, 83, 285
BstKTI	GATC	2 cut(s)	412, 523
BstMAI	GTCTC	2 cut(s)	118, 408
BstMBI	GATC	2 cut(s)	409, 520
BstMCI	CGRYCG	1 cut(s)	523
BstMWI	GCNNNNNNNGC	6 cut(s)	11, 16, 51, 72, 141, 725
BstNI	CCWGG	1 cut(s)	534
BstSCI	CCNGG	1 cut(s)	532
BstUI	CGCG	1 cut(s)	144
BstV1I	GCAGC	7 cut(s)	3, 53, 367, 715, 718, 847, 850
BstV2I	GAAGAC	1 cut(s)	94
BsuRI	GGCC	2 cut(s)	54, 660
BtrI	CACGTC	1 cut(s)	547
BtsCI	GGATG	1 cut(s)	898
BtsIMutI	CAGTG	2 cut(s)	313, 546
BtuMI	TCGCGA	1 cut(s)	144
Cac8I	GCNNGC	2 cut(s)	12, 721
CaiI	CAGNNNCTG	1 cut(s)	701
CfoI	GCGC	3 cut(s)	16, 83, 285
Cfr13I	GGNCC	3 cut(s)	107, 658, 677
CseI	GACGC	2 cut(s)	58, 232
Csp6I	GTAC	3 cut(s)	187, 259, 527
CviAII	CATG	3 cut(s)	386, 826, 948
CviQI	GTAC	3 cut(s)	187, 259, 527
DdeI	CTNAG	2 cut(s)	62, 324
DinI	GGCGCC	1 cut(s)	82
DpnI	GATC	2 cut(s)	411, 522
DpnII	GATC	2 cut(s)	409, 520
Eam1104I	CTCTTC	1 cut(s)	814
EarI	CTCTTC	1 cut(s)	814
Eco130I	CCWWGG	1 cut(s)	248
Eco147I	AGGCCT	1 cut(s)	54
Eco31I	GGTCTC	1 cut(s)	408
Eco32I	GATATC	1 cut(s)	805
Eco47I	GGWCC	2 cut(s)	107, 677
Eco47III	AGCGCT	1 cut(s)	15
EcoRII	CCWGG	1 cut(s)	532
EcoRV	GATATC	1 cut(s)	805
EcoT14I	CCWWGG	1 cut(s)	248
EgeI	GGCGCC	1 cut(s)	82
EheI	GGCGCC	1 cut(s)	82
ErhI	CCWWGG	1 cut(s)	248
Esp3I	CGTCTC	1 cut(s)	118
FaeI	CATG	3 cut(s)	389, 829, 951
FalI	AAGNNNNNCTT	2 cut(s)	15, 47
FaqI	GGGAC	3 cut(s)	93, 211, 230
FatI	CATG	3 cut(s)	385, 825, 947
Fnu4HI	GCNGC	7 cut(s)	17, 67, 356, 729, 732, 861, 864
FokI	GGATG	1 cut(s)	905
Fsp4HI	GCNGC	7 cut(s)	17, 67, 356, 729, 732, 861, 864
FspBI	CTAG	3 cut(s)	407, 905, 954
GlaI	GCGC	3 cut(s)	15, 82, 284
GluI	GCNGC	7 cut(s)	17, 67, 356, 729, 732, 861, 864
GsaI	CCCAGC	1 cut(s)	698
GsuI	CTGGAG	1 cut(s)	666
HaeII	RGCGCY	3 cut(s)	17, 84, 286
HaeIII	GGCC	2 cut(s)	54, 660
HgaI	GACGC	2 cut(s)	58, 232
HhaI	GCGC	3 cut(s)	16, 83, 285
Hin1I	GRCGYC	2 cut(s)	81, 243
Hin1II	CATG	3 cut(s)	389, 829, 951
Hin6I	GCGC	3 cut(s)	14, 81, 283
HinP1I	GCGC	3 cut(s)	14, 81, 283
HinfI	GANTC	3 cut(s)	466, 581, 960
Hpy166II	GTNNAC	1 cut(s)	544
Hpy188I	TCNGA	4 cut(s)	118, 208, 414, 927
Hpy188III	TCNNGA	5 cut(s)	35, 143, 407, 518, 683
Hpy8I	GTNNAC	1 cut(s)	544
Hpy99I	CGWCG	2 cut(s)	74, 159
HpyAV	CCTTC	3 cut(s)	205, 671, 883
HpyCH4III	ACNGT	4 cut(s)	296, 541, 788, 883
HpyCH4IV	ACGT	4 cut(s)	99, 366, 513, 546
HpyCH4V	TGCA	4 cut(s)	269, 355, 379, 781
HpyF10VI	GCNNNNNNNGC	6 cut(s)	11, 16, 51, 72, 141, 725
HpyF3I	CTNAG	2 cut(s)	62, 324
HpySE526I	ACGT	4 cut(s)	99, 366, 513, 546
Hsp92I	GRCGYC	2 cut(s)	81, 243
Hsp92II	CATG	3 cut(s)	389, 829, 951
HspAI	GCGC	3 cut(s)	14, 81, 283
KasI	GGCGCC	1 cut(s)	80
KpnI	GGTACC	1 cut(s)	530
Kzo9I	GATC	2 cut(s)	409, 520
LmnI	GCTCC	2 cut(s)	140, 871
Lsp1109I	GCAGC	7 cut(s)	3, 53, 367, 715, 718, 847, 850
LweI	GCATC	2 cut(s)	171, 707
MaeI	CTAG	3 cut(s)	407, 905, 954
MaeII	ACGT	4 cut(s)	99, 366, 513, 546
MaeIII	GTNAC	1 cut(s)	319
MalI	GATC	2 cut(s)	411, 522
MboI	GATC	2 cut(s)	409, 520
MboII	GAAGA	6 cut(s)	94, 163, 475, 769, 801, 949
MluCI	AATT	4 cut(s)	395, 474, 501, 707
Mly113I	GGCGCC	1 cut(s)	81
MmeI	TCCRAC	1 cut(s)	819
MnlI	CCTC	9 cut(s)	65, 94, 99, 190, 586, 690, 746, 841, 904
MroXI	GAANNNNTTC	2 cut(s)	150, 921
MseI	TTAA	3 cut(s)	473, 576, 837
MspA1I	CMGCKG	2 cut(s)	66, 358
MspR9I	CCNGG	1 cut(s)	534
MvaI	CCWGG	1 cut(s)	534
MvnI	CGCG	1 cut(s)	144
MwoI	GCNNNNNNNGC	6 cut(s)	11, 16, 51, 72, 141, 725
NarI	GGCGCC	1 cut(s)	81
NdeII	GATC	2 cut(s)	409, 520
NlaIII	CATG	3 cut(s)	389, 829, 951
NlaIV	GGNNCC	5 cut(s)	82, 109, 136, 528, 692
NmeAIII	GCCGAG	1 cut(s)	749
NmuCI	GTSAC	1 cut(s)	319
NruI	TCGCGA	1 cut(s)	144
PceI	AGGCCT	1 cut(s)	54
PdmI	GAANNNNTTC	2 cut(s)	150, 921
PfeI	GAWTC	3 cut(s)	466, 581, 960
PflFI	GACNNNGTC	2 cut(s)	202, 949
PkrI	GCNGC	7 cut(s)	18, 68, 357, 730, 733, 862, 865
Ple19I	CGATCG	1 cut(s)	523
PluTI	GGCGCC	1 cut(s)	84
PshBI	ATTAAT	1 cut(s)	576
Psp6I	CCWGG	1 cut(s)	532
PspFI	CCCAGC	1 cut(s)	694
PspGI	CCWGG	1 cut(s)	532
PspN4I	GGNNCC	5 cut(s)	82, 109, 136, 528, 692
PspPI	GGNCC	3 cut(s)	107, 658, 677
PstNI	CAGNNNCTG	1 cut(s)	701
PsyI	GACNNNGTC	2 cut(s)	202, 949
PvuI	CGATCG	1 cut(s)	523
PvuII	CAGCTG	2 cut(s)	66, 358
RruI	TCGCGA	1 cut(s)	144
RsaI	GTAC	3 cut(s)	188, 260, 528
RsaNI	GTAC	3 cut(s)	187, 259, 527
SaqAI	TTAA	3 cut(s)	473, 576, 837
SatI	GCNGC	7 cut(s)	17, 67, 356, 729, 732, 861, 864
Sau3AI	GATC	2 cut(s)	409, 520
Sau96I	GGNCC	3 cut(s)	107, 658, 677
ScrFI	CCNGG	1 cut(s)	534
SfaNI	GCATC	2 cut(s)	171, 707
SfoI	GGCGCC	1 cut(s)	82
SinI	GGWCC	2 cut(s)	107, 677
SmlI	CTYRAG	2 cut(s)	56, 449
SmoI	CTYRAG	2 cut(s)	56, 449
Sse9I	AATT	4 cut(s)	395, 474, 501, 707
SseBI	AGGCCT	1 cut(s)	54
SsiI	CCGC	1 cut(s)	311
SspDI	GGCGCC	1 cut(s)	80
SspMI	CTAG	3 cut(s)	407, 905, 954
StuI	AGGCCT	1 cut(s)	54
StyD4I	CCNGG	1 cut(s)	532
StyI	CCWWGG	1 cut(s)	248
TaaI	ACNGT	4 cut(s)	296, 541, 788, 883
TaiI	ACGT	4 cut(s)	102, 369, 516, 549
TaqI	TCGA	3 cut(s)	34, 174, 519
TaqII	GACCGA	1 cut(s)	95
TasI	AATT	4 cut(s)	395, 474, 501, 707
TatI	WGTACW	1 cut(s)	258
TfiI	GAWTC	3 cut(s)	466, 581, 960
Tru1I	TTAA	3 cut(s)	473, 576, 837
Tru9I	TTAA	3 cut(s)	473, 576, 837
TscAI	CASTG	2 cut(s)	313, 546
TseFI	GTSAC	1 cut(s)	319
TseI	GCWGC	7 cut(s)	16, 66, 355, 728, 731, 860, 863
Tsp45I	GTSAC	1 cut(s)	319
TspDTI	ATGAA	3 cut(s)	438, 842, 909
TspGWI	ACGGA	2 cut(s)	127, 174
TspRI	CASTG	2 cut(s)	313, 546
Tth111I	GACNNNGTC	2 cut(s)	202, 949
VpaK11BI	GGWCC	2 cut(s)	107, 677
VspI	ATTAAT	1 cut(s)	576
XapI	RAATTY	2 cut(s)	395, 501
XbaI	TCTAGA	1 cut(s)	406
XmnI	GAANNNNTTC	2 cut(s)	150, 921
XspI	CTAG	3 cut(s)	407, 905, 954

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.