Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp08

Orthogroup ID

OG0011671

Physical Location & Seq

Genomic Coordinates Forward (+)

16950817 .. 16951566

Gene Structure 750 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.8G161100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 522 bp

ATGGCTTCAAACCCTAAGGTCTTCTTCGACATGACGATCGGAGGCCAGCCTGCCGGCCGCATCGTCATGGAGCTCTTCGCCGACACCACCCCCCGCACCGCCGAGAACTTCAGGGCTCTCTGCACCGGAGAGAAGGGCGCTGGCCGCAGCGGCAAGCCCCTGCACTACAAGGGCTCCTCCTTCCACCGAGTGATCCCAGGGTTCATGTGCCAGGGAGGTGACTTCACCGCCGGAAACGGCACCGGAGGCGAGTCGATCTACGGCGCCAAGTTCGCCGATGAGAACTTCATCAAGAAGCACACCGGACCTGGAATTCTGTCCATGGCCAACGCTGGTCCCGGGACCAACGGATCTCAGTTCTTCGTCTGCACGGCCAAGACCGAGTGGCTCGACGGCAAGCACGTCGTGTTCGGTCAAGTGACCGAGGGGCTCGATGTTGTGAAGAACATCGAGAAGGTTGGGTCGAGCTCCGGCAGGACCTCCAGGCCAGTGGTGGTTGCTGACTGCGGCCAGCTCTCCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000413 GO:0003674 GO:0003755 GO:0003824 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006464 GO:0006807 GO:0008144 GO:0008150 GO:0008152 GO:0009987 GO:0016018 GO:0016853 GO:0016859 GO:0018193 GO:0018208 GO:0019538 GO:0033218 GO:0036211 GO:0042277 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pro_isomerase

Protein Analysis

174

Amino Acids

18.17

Weight (kDa)

8.72

Isoelectric Point (pI)

21.38

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0011671)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G16600 AT2G16600 AT2G21130 AT4G38740
fragaria_vesca	FvH4_2g01940 FvH4_2g01940
malus_domestica	MD10G1119700.v1.1
prunus_persica	Prupe.8G161100_v2.0.a1
pyrus_communis	pycom05g11090 pycom10g10310
rosa_chinensis	RchiOBHm_Chr6g0245141
rosa_laevigata	RLG00000015322
rosa_roxburghii	Rroxscaffold_7G00215430
rosa_rugosa	Rorug05G0512300
rosa_samantha	Rh6AG027100 Rh6BG023000 Rh6CG021700 Rh6DG021800
rosa_wichuraiana	Rw6G002290

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	2 cut(s)	239, 263
AciI	CCGC	7 cut(s)	58, 94, 99, 145, 150, 228, 507
AclWI	GGATC	2 cut(s)	187, 358
AcoI	YGGCCR	5 cut(s)	55, 142, 324, 372, 508
AcsI	RAATTY	1 cut(s)	312
AcuI	CTGAAG	1 cut(s)	94
AcyI	GRCGYC	1 cut(s)	264
AdeI	CACNNNGTG	2 cut(s)	190, 406
AgsI	TTSAA	1 cut(s)	9
AjiI	CACGTC	1 cut(s)	403
AjnI	CCWGG	4 cut(s)	196, 210, 307, 482
AluBI	AGCT	3 cut(s)	73, 468, 514
AluI	AGCT	3 cut(s)	73, 468, 514
Alw21I	GWGCWC	2 cut(s)	75, 470
AlwI	GGATC	2 cut(s)	187, 358
Ama87I	CYCGRG	1 cut(s)	338
AoxI	GGCC	7 cut(s)	43, 55, 142, 324, 372, 485, 508
ApeKI	GCWGC	1 cut(s)	147
ApoI	RAATTY	1 cut(s)	312
AspLEI	GCGC	2 cut(s)	140, 266
AspS9I	GGNCC	4 cut(s)	305, 335, 342, 477
AsuC2I	CCSGG	2 cut(s)	339, 340
AsuHPI	GGTGA	2 cut(s)	217, 230
AvaI	CYCGRG	1 cut(s)	338
AvaII	GGWCC	4 cut(s)	305, 335, 342, 477
AxyI	CCTNAGG	1 cut(s)	15
BalI	TGGCCA	1 cut(s)	326
BanI	GGYRCC	2 cut(s)	239, 263
BanII	GRGCYC	5 cut(s)	75, 118, 176, 432, 470
BbsI	GAAGAC	1 cut(s)	13
Bbv12I	GWGCWC	2 cut(s)	75, 470
BbvI	GCAGC	1 cut(s)	159
BceAI	ACGGC	4 cut(s)	253, 277, 387, 409
BcgI	CGANNNNNNTGC	2 cut(s)	385, 419
BciT130I	CCWGG	4 cut(s)	198, 212, 309, 484
BcnI	CCSGG	2 cut(s)	339, 340
BfaI	CTAG	1 cut(s)	520
BfoI	RGCGCY	2 cut(s)	141, 267
BglI	GCCNNNNNGGC	1 cut(s)	150
BisI	GCNGC	5 cut(s)	58, 145, 148, 151, 508
BlsI	GCNGC	5 cut(s)	59, 146, 149, 152, 509
Bme1390I	CCNGG	6 cut(s)	198, 212, 309, 339, 340, 484
Bme18I	GGWCC	4 cut(s)	305, 335, 342, 477
BmeT110I	CYCGRG	1 cut(s)	338
BmgBI	CACGTC	1 cut(s)	403
BmgT120I	GGNCC	4 cut(s)	305, 335, 342, 477
BmiI	GGNNCC	5 cut(s)	175, 241, 265, 337, 343
BmrFI	CCNGG	6 cut(s)	198, 212, 309, 339, 340, 484
BmsI	GCATC	1 cut(s)	69
BpiI	GAAGAC	1 cut(s)	13
BpmI	CTGGAG	1 cut(s)	466
BpuMI	CCSGG	2 cut(s)	339, 340
BsaHI	GRCGYC	1 cut(s)	264
BsaJI	CCNNGG	6 cut(s)	196, 197, 211, 321, 338, 423
BsaWI	WCCGGW	3 cut(s)	125, 242, 302
BsaXI	ACNNNNNCTCC	2 cut(s)	158, 188
Bse118I	RCCGGY	1 cut(s)	53
Bse1I	ACTGG	1 cut(s)	488
Bse21I	CCTNAGG	1 cut(s)	15
BseBI	CCWGG	4 cut(s)	198, 212, 309, 484
BseDI	CCNNGG	6 cut(s)	196, 197, 211, 321, 338, 423
BseMII	CTCAG	1 cut(s)	368
BseNI	ACTGG	1 cut(s)	488
BseRI	GAGGAG	1 cut(s)	166
BseX3I	CGGCCG	1 cut(s)	55
BseXI	GCAGC	1 cut(s)	159
BsgI	GTGCAG	3 cut(s)	106, 146, 352
Bsh1285I	CGRYCG	2 cut(s)	39, 58
BshFI	GGCC	7 cut(s)	45, 57, 144, 326, 374, 487, 510
BshNI	GGYRCC	2 cut(s)	239, 263
BsiEI	CGRYCG	2 cut(s)	39, 58
BsiHKAI	GWGCWC	2 cut(s)	75, 470
BsiHKCI	CYCGRG	1 cut(s)	338
BsiSI	CCGG	7 cut(s)	54, 126, 231, 243, 303, 339, 471
BslFI	GGGAC	2 cut(s)	321, 355
BsmFI	GGGAC	2 cut(s)	321, 355
BsnI	GGCC	7 cut(s)	45, 57, 144, 326, 374, 487, 510
BsoBI	CYCGRG	1 cut(s)	338
Bsp1286I	GDGCHC	5 cut(s)	75, 118, 176, 432, 470
Bsp143I	GATC	4 cut(s)	36, 192, 255, 350
Bsp19I	CCATGG	1 cut(s)	321
BspACI	CCGC	7 cut(s)	58, 94, 99, 145, 150, 228, 507
BspANI	GGCC	7 cut(s)	45, 57, 144, 326, 374, 487, 510
BspCNI	CTCAG	1 cut(s)	367
BspLI	GGNNCC	5 cut(s)	175, 241, 265, 337, 343
BspPI	GGATC	2 cut(s)	187, 358
BspQI	GCTCTTC	1 cut(s)	80
BspT107I	GGYRCC	2 cut(s)	239, 263
BsrFI	RCCGGY	1 cut(s)	53
BsrI	ACTGG	1 cut(s)	488
BssAI	RCCGGY	1 cut(s)	53
BssECI	CCNNGG	6 cut(s)	196, 197, 211, 321, 338, 423
BssMI	GATC	4 cut(s)	36, 192, 255, 350
BssNI	GRCGYC	1 cut(s)	264
BssT1I	CCWWGG	1 cut(s)	321
Bst2UI	CCWGG	4 cut(s)	198, 212, 309, 484
Bst6I	CTCTTC	1 cut(s)	80
BstACI	GRCGYC	1 cut(s)	264
BstC8I	GCNNGC	7 cut(s)	47, 51, 55, 142, 155, 398, 512
BstDEI	CTNAG	2 cut(s)	15, 354
BstDSI	CCRYGG	1 cut(s)	321
BstH2I	RGCGCY	2 cut(s)	141, 267
BstHHI	GCGC	2 cut(s)	140, 266
BstKTI	GATC	4 cut(s)	39, 195, 258, 353
BstMBI	GATC	4 cut(s)	36, 192, 255, 350
BstMCI	CGRYCG	2 cut(s)	39, 58
BstMWI	GCNNNNNNNGC	4 cut(s)	144, 150, 246, 272
BstNI	CCWGG	4 cut(s)	198, 212, 309, 484
BstSCI	CCNGG	6 cut(s)	196, 210, 307, 337, 338, 482
BstV1I	GCAGC	1 cut(s)	159
BstV2I	GAAGAC	1 cut(s)	13
BstX2I	RGATCY	1 cut(s)	350
BstXI	CCANNNNNNTGG	1 cut(s)	490
BstYI	RGATCY	1 cut(s)	350
BstZI	CGGCCG	1 cut(s)	55
Bsu36I	CCTNAGG	1 cut(s)	15
BsuRI	GGCC	7 cut(s)	45, 57, 144, 326, 374, 487, 510
BtgI	CCRYGG	1 cut(s)	321
BtrI	CACGTC	1 cut(s)	403
BtsIMutI	CAGTG	1 cut(s)	495
Cac8I	GCNNGC	7 cut(s)	47, 51, 55, 142, 155, 398, 512
CfoI	GCGC	2 cut(s)	140, 266
Cfr10I	RCCGGY	1 cut(s)	53
Cfr13I	GGNCC	4 cut(s)	305, 335, 342, 477
Cfr9I	CCCGGG	1 cut(s)	338
CviAII	CATG	4 cut(s)	31, 67, 205, 322
DdeI	CTNAG	2 cut(s)	15, 354
DinI	GGCGCC	1 cut(s)	265
DpnI	GATC	4 cut(s)	38, 194, 257, 352
DpnII	GATC	4 cut(s)	36, 192, 255, 350
DraIII	CACNNNGTG	2 cut(s)	190, 406
EaeI	YGGCCR	5 cut(s)	55, 142, 324, 372, 508
EagI	CGGCCG	1 cut(s)	55
Eam1104I	CTCTTC	1 cut(s)	80
EarI	CTCTTC	1 cut(s)	80
Ecl136II	GAGCTC	2 cut(s)	73, 468
EclXI	CGGCCG	1 cut(s)	55
Eco130I	CCWWGG	1 cut(s)	321
Eco24I	GRGCYC	5 cut(s)	75, 118, 176, 432, 470
Eco47I	GGWCC	4 cut(s)	305, 335, 342, 477
Eco52I	CGGCCG	1 cut(s)	55
Eco53kI	GAGCTC	2 cut(s)	73, 468
Eco57I	CTGAAG	1 cut(s)	94
Eco81I	CCTNAGG	1 cut(s)	15
Eco88I	CYCGRG	1 cut(s)	338
EcoICRI	GAGCTC	2 cut(s)	73, 468
EcoO109I	RGGNCCY	1 cut(s)	477
EcoRI	GAATTC	1 cut(s)	312
EcoRII	CCWGG	4 cut(s)	196, 210, 307, 482
EcoT14I	CCWWGG	1 cut(s)	321
EcoT38I	GRGCYC	5 cut(s)	75, 118, 176, 432, 470
EgeI	GGCGCC	1 cut(s)	265
EheI	GGCGCC	1 cut(s)	265
ErhI	CCWWGG	1 cut(s)	321
FaeI	CATG	4 cut(s)	34, 70, 208, 325
FaiI	YATR	4 cut(s)	32, 68, 206, 323
FalI	AAGNNNNNCTT	2 cut(s)	8, 40
FaqI	GGGAC	2 cut(s)	321, 355
FatI	CATG	4 cut(s)	30, 66, 204, 321
FauI	CCCGC	1 cut(s)	101
Fnu4HI	GCNGC	5 cut(s)	58, 145, 148, 151, 508
FriOI	GRGCYC	5 cut(s)	75, 118, 176, 432, 470
Fsp4HI	GCNGC	5 cut(s)	58, 145, 148, 151, 508
FspBI	CTAG	1 cut(s)	520
GlaI	GCGC	2 cut(s)	139, 265
GluI	GCNGC	5 cut(s)	58, 145, 148, 151, 508
GsuI	CTGGAG	1 cut(s)	466
HaeII	RGCGCY	2 cut(s)	141, 267
HaeIII	GGCC	7 cut(s)	45, 57, 144, 326, 374, 487, 510
HapII	CCGG	7 cut(s)	54, 126, 231, 243, 303, 339, 471
HhaI	GCGC	2 cut(s)	140, 266
Hin1I	GRCGYC	1 cut(s)	264
Hin1II	CATG	4 cut(s)	34, 70, 208, 325
Hin6I	GCGC	2 cut(s)	138, 264
HinP1I	GCGC	2 cut(s)	138, 264
HinfI	GANTC	1 cut(s)	251
HpaII	CCGG	7 cut(s)	54, 126, 231, 243, 303, 339, 471
HphI	GGTGA	2 cut(s)	217, 230
Hpy188I	TCNGA	1 cut(s)	41
Hpy188III	TCNNGA	2 cut(s)	292, 451
Hpy99I	CGWCG	2 cut(s)	395, 407
HpyAV	CCTTC	3 cut(s)	127, 190, 448
HpyCH4IV	ACGT	1 cut(s)	402
HpyCH4V	TGCA	3 cut(s)	123, 163, 369
HpyF10VI	GCNNNNNNNGC	4 cut(s)	144, 150, 246, 272
HpyF3I	CTNAG	2 cut(s)	15, 354
HpySE526I	ACGT	1 cut(s)	402
Hsp92I	GRCGYC	1 cut(s)	264
Hsp92II	CATG	4 cut(s)	34, 70, 208, 325
HspAI	GCGC	2 cut(s)	138, 264
KasI	GGCGCC	1 cut(s)	263
KroI	GCCGGC	1 cut(s)	53
KroNI	GCCGGC	1 cut(s)	55
Kzo9I	GATC	4 cut(s)	36, 192, 255, 350
LguI	GCTCTTC	1 cut(s)	80
LmnI	GCTCC	3 cut(s)	70, 179, 473
Lsp1109I	GCAGC	1 cut(s)	159
LweI	GCATC	1 cut(s)	69
MaeI	CTAG	1 cut(s)	520
MaeII	ACGT	1 cut(s)	402
MaeIII	GTNAC	2 cut(s)	218, 418
MalI	GATC	4 cut(s)	38, 194, 257, 352
MboI	GATC	4 cut(s)	36, 192, 255, 350
MboII	GAAGA	5 cut(s)	13, 16, 67, 352, 454
MflI	RGATCY	1 cut(s)	350
MhlI	GDGCHC	5 cut(s)	75, 118, 176, 432, 470
MlsI	TGGCCA	1 cut(s)	326
MluCI	AATT	1 cut(s)	312
MluNI	TGGCCA	1 cut(s)	326
Mly113I	GGCGCC	1 cut(s)	264
MlyI	GAGTC	1 cut(s)	260
MnlI	CCTC	6 cut(s)	35, 187, 209, 239, 418, 490
Mox20I	TGGCCA	1 cut(s)	326
MroNI	GCCGGC	1 cut(s)	53
MscI	TGGCCA	1 cut(s)	326
MslI	CAYNNNNRTG	1 cut(s)	65
Msp20I	TGGCCA	1 cut(s)	326
MspA1I	CMGCKG	1 cut(s)	150
MspI	CCGG	7 cut(s)	54, 126, 231, 243, 303, 339, 471
MspR9I	CCNGG	6 cut(s)	198, 212, 309, 339, 340, 484
MvaI	CCWGG	4 cut(s)	198, 212, 309, 484
MwoI	GCNNNNNNNGC	4 cut(s)	144, 150, 246, 272
NaeI	GCCGGC	1 cut(s)	55
NarI	GGCGCC	1 cut(s)	264
NciI	CCSGG	2 cut(s)	339, 340
NcoI	CCATGG	1 cut(s)	321
NdeII	GATC	4 cut(s)	36, 192, 255, 350
NgoMIV	GCCGGC	1 cut(s)	53
NlaIII	CATG	4 cut(s)	34, 70, 208, 325
NlaIV	GGNNCC	5 cut(s)	175, 241, 265, 337, 343
NmeAIII	GCCGAG	1 cut(s)	127
NmuCI	GTSAC	2 cut(s)	218, 418
PasI	CCCWGGG	1 cut(s)	197
PciSI	GCTCTTC	1 cut(s)	80
PcsI	WCGNNNNNNNCGW	1 cut(s)	399
PdiI	GCCGGC	1 cut(s)	55
PkrI	GCNGC	5 cut(s)	59, 146, 149, 152, 509
Ple19I	CGATCG	1 cut(s)	39
PleI	GAGTC	1 cut(s)	259
PluTI	GGCGCC	1 cut(s)	267
PpsI	GAGTC	1 cut(s)	259
PpuMI	RGGWCCY	1 cut(s)	477
Psp124BI	GAGCTC	2 cut(s)	75, 470
Psp5II	RGGWCCY	1 cut(s)	477
Psp6I	CCWGG	4 cut(s)	196, 210, 307, 482
PspGI	CCWGG	4 cut(s)	196, 210, 307, 482
PspN4I	GGNNCC	5 cut(s)	175, 241, 265, 337, 343
PspPI	GGNCC	4 cut(s)	305, 335, 342, 477
PspPPI	RGGWCCY	1 cut(s)	477
PsuI	RGATCY	1 cut(s)	350
PvuI	CGATCG	1 cut(s)	39
RseI	CAYNNNNRTG	1 cut(s)	65
SacI	GAGCTC	2 cut(s)	75, 470
SapI	GCTCTTC	1 cut(s)	80
SatI	GCNGC	5 cut(s)	58, 145, 148, 151, 508
Sau3AI	GATC	4 cut(s)	36, 192, 255, 350
Sau96I	GGNCC	4 cut(s)	305, 335, 342, 477
SchI	GAGTC	1 cut(s)	260
ScrFI	CCNGG	6 cut(s)	198, 212, 309, 339, 340, 484
SduI	GDGCHC	5 cut(s)	75, 118, 176, 432, 470
SetI	ASST	9 cut(s)	21, 75, 220, 310, 405, 459, 470, 482, 516
SfaNI	GCATC	1 cut(s)	69
SfoI	GGCGCC	1 cut(s)	265
SinI	GGWCC	4 cut(s)	305, 335, 342, 477
SmaI	CCCGGG	1 cut(s)	340
SmiMI	CAYNNNNRTG	1 cut(s)	65
Sse9I	AATT	1 cut(s)	312
SsiI	CCGC	7 cut(s)	58, 94, 99, 145, 150, 228, 507
SspDI	GGCGCC	1 cut(s)	263
SspMI	CTAG	1 cut(s)	520
SstI	GAGCTC	2 cut(s)	75, 470
StyD4I	CCNGG	6 cut(s)	196, 210, 307, 337, 338, 482
StyI	CCWWGG	1 cut(s)	321
TaiI	ACGT	1 cut(s)	405
TaqI	TCGA	6 cut(s)	27, 254, 390, 432, 450, 464
TaqII	GACCGA	3 cut(s)	395, 401, 437
TasI	AATT	1 cut(s)	312
TauI	GCSGC	4 cut(s)	60, 147, 153, 510
TscAI	CASTG	1 cut(s)	495
TseFI	GTSAC	2 cut(s)	218, 418
TseI	GCWGC	1 cut(s)	147
Tsp45I	GTSAC	2 cut(s)	218, 418
TspDTI	ATGAA	2 cut(s)	193, 277
TspGWI	ACGGA	1 cut(s)	363
TspMI	CCCGGG	1 cut(s)	338
TspRI	CASTG	1 cut(s)	495
VpaK11BI	GGWCC	4 cut(s)	305, 335, 342, 477
XapI	RAATTY	1 cut(s)	312
XcmI	CCANNNNNNNNNTGG	1 cut(s)	490
XmaI	CCCGGG	1 cut(s)	338
XspI	CTAG	1 cut(s)	520

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.