mediator of RNA polymerase II transcription subunit
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G12230 AT5G19480 AT5G19480 AT5G19480 AT5G19480 |
| fragaria_vesca | FvH4_2g17320 |
| malus_domestica | MD05G1152100.v1.1 MD10G1146700.v1.1 |
| prunus_persica | Prupe.8G184800_v2.0.a1 |
| pyrus_communis | pycom05g14670 |
| rosa_chinensis | RchiOBHm_Chr6g0281841 |
| rosa_laevigata | RLG00000012925 |
| rosa_multiflora | Rmu_sc0001992.1_g000014 Rmu_ssc0000126.1_g000034 |
| rosa_roxburghii | Rroxscaffold_7G00186740 |
| rosa_rugosa | Rorug06G0143900 Rorug06G0144000 Rorug06G0144100 |
| rosa_samantha | Rh6AG257100 Rh6BG260200 Rh6CG259200 Rh6DG251300 |
| rosa_wichuraiana | Rw6G022270 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 2 cut(s) | 12, 207 |
| AcuI | CTGAAG | 1 cut(s) | 30 |
| AfaI | GTAC | 1 cut(s) | 217 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 324 |
| AgeI | ACCGGT | 1 cut(s) | 47 |
| AluBI | AGCT | 2 cut(s) | 43, 296 |
| AluI | AGCT | 2 cut(s) | 43, 296 |
| Alw21I | GWGCWC | 1 cut(s) | 426 |
| Alw26I | GTCTC | 2 cut(s) | 156, 396 |
| AlwI | GGATC | 2 cut(s) | 12, 207 |
| ApeKI | GCWGC | 1 cut(s) | 341 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 344, 376 |
| AsiGI | ACCGGT | 1 cut(s) | 47 |
| AspS9I | GGNCC | 1 cut(s) | 32 |
| AsuHPI | GGTGA | 1 cut(s) | 527 |
| AvaII | GGWCC | 1 cut(s) | 32 |
| BamHI | GGATCC | 1 cut(s) | 4 |
| Bbv12I | GWGCWC | 1 cut(s) | 426 |
| BbvI | GCAGC | 1 cut(s) | 353 |
| BccI | CCATC | 3 cut(s) | 179, 288, 551 |
| BceAI | ACGGC | 1 cut(s) | 426 |
| BclI | TGATCA | 1 cut(s) | 517 |
| BcoDI | GTCTC | 2 cut(s) | 156, 396 |
| BfaI | CTAG | 1 cut(s) | 257 |
| BfmI | CTRYAG | 1 cut(s) | 54 |
| BglII | AGATCT | 2 cut(s) | 58, 568 |
| BisI | GCNGC | 1 cut(s) | 342 |
| BlsI | GCNGC | 1 cut(s) | 343 |
| Bme18I | GGWCC | 1 cut(s) | 32 |
| BmgT120I | GGNCC | 1 cut(s) | 32 |
| BmiI | GGNNCC | 1 cut(s) | 6 |
| BmsI | GCATC | 2 cut(s) | 180, 508 |
| BsaBI | GATNNNNATC | 1 cut(s) | 567 |
| BsaWI | WCCGGW | 1 cut(s) | 47 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 324 |
| Bse118I | RCCGGY | 1 cut(s) | 47 |
| Bse1I | ACTGG | 1 cut(s) | 517 |
| Bse8I | GATNNNNATC | 1 cut(s) | 567 |
| BseGI | GGATG | 1 cut(s) | 195 |
| BseJI | GATNNNNATC | 1 cut(s) | 567 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 324 |
| BseMII | CTCAG | 2 cut(s) | 144, 280 |
| BseNI | ACTGG | 1 cut(s) | 517 |
| BseXI | GCAGC | 1 cut(s) | 353 |
| BshTI | ACCGGT | 1 cut(s) | 47 |
| BsiHKAI | GWGCWC | 1 cut(s) | 426 |
| BsiSI | CCGG | 1 cut(s) | 48 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 324 |
| BsmAI | GTCTC | 2 cut(s) | 156, 396 |
| Bsp1286I | GDGCHC | 1 cut(s) | 426 |
| Bsp143I | GATC | 7 cut(s) | 4, 58, 110, 199, 451, 517, 568 |
| BspCNI | CTCAG | 2 cut(s) | 143, 279 |
| BspHI | TCATGA | 1 cut(s) | 502 |
| BspLI | GGNNCC | 1 cut(s) | 6 |
| BspPI | GGATC | 2 cut(s) | 12, 207 |
| BsrFI | RCCGGY | 1 cut(s) | 47 |
| BsrI | ACTGG | 1 cut(s) | 517 |
| BssAI | RCCGGY | 1 cut(s) | 47 |
| BssMI | GATC | 7 cut(s) | 4, 58, 110, 199, 451, 517, 568 |
| BstC8I | GCNNGC | 1 cut(s) | 107 |
| BstDEI | CTNAG | 3 cut(s) | 130, 266, 284 |
| BstF5I | GGATG | 1 cut(s) | 195 |
| BstKTI | GATC | 7 cut(s) | 7, 61, 113, 202, 454, 520, 571 |
| BstMAI | GTCTC | 2 cut(s) | 156, 396 |
| BstMBI | GATC | 7 cut(s) | 4, 58, 110, 199, 451, 517, 568 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 430 |
| BstSFI | CTRYAG | 1 cut(s) | 54 |
| BstV1I | GCAGC | 1 cut(s) | 353 |
| BstX2I | RGATCY | 3 cut(s) | 4, 58, 568 |
| BstYI | RGATCY | 3 cut(s) | 4, 58, 568 |
| BtsCI | GGATG | 1 cut(s) | 195 |
| Cac8I | GCNNGC | 1 cut(s) | 107 |
| CciI | TCATGA | 1 cut(s) | 502 |
| Cfr10I | RCCGGY | 1 cut(s) | 47 |
| Cfr13I | GGNCC | 1 cut(s) | 32 |
| Csp6I | GTAC | 1 cut(s) | 216 |
| CspAI | ACCGGT | 1 cut(s) | 47 |
| CviAII | CATG | 3 cut(s) | 92, 503, 536 |
| CviJI | RGCY | 4 cut(s) | 43, 247, 275, 296 |
| CviKI_1 | RGCY | 4 cut(s) | 43, 247, 275, 296 |
| CviQI | GTAC | 1 cut(s) | 216 |
| DdeI | CTNAG | 3 cut(s) | 130, 266, 284 |
| DpnI | GATC | 7 cut(s) | 6, 60, 112, 201, 453, 519, 570 |
| DpnII | GATC | 7 cut(s) | 4, 58, 110, 199, 451, 517, 568 |
| Eco47I | GGWCC | 1 cut(s) | 32 |
| Eco57I | CTGAAG | 1 cut(s) | 30 |
| FaeI | CATG | 3 cut(s) | 95, 506, 539 |
| FaiI | YATR | 9 cut(s) | 65, 93, 150, 223, 242, 447, 504, 537, 601 |
| FatI | CATG | 3 cut(s) | 91, 502, 535 |
| FbaI | TGATCA | 1 cut(s) | 517 |
| Fnu4HI | GCNGC | 1 cut(s) | 342 |
| FokI | GGATG | 1 cut(s) | 202 |
| Fsp4HI | GCNGC | 1 cut(s) | 342 |
| FspBI | CTAG | 1 cut(s) | 257 |
| GluI | GCNGC | 1 cut(s) | 342 |
| HapII | CCGG | 1 cut(s) | 48 |
| Hin1II | CATG | 3 cut(s) | 95, 506, 539 |
| HinfI | GANTC | 3 cut(s) | 328, 359, 506 |
| HpaII | CCGG | 1 cut(s) | 48 |
| HphI | GGTGA | 1 cut(s) | 527 |
| Hpy166II | GTNNAC | 2 cut(s) | 233, 583 |
| Hpy188I | TCNGA | 3 cut(s) | 133, 213, 269 |
| Hpy188III | TCNNGA | 2 cut(s) | 8, 503 |
| Hpy8I | GTNNAC | 2 cut(s) | 233, 583 |
| HpyAV | CCTTC | 2 cut(s) | 5, 406 |
| HpyCH4V | TGCA | 3 cut(s) | 105, 193, 341 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 430 |
| HpyF3I | CTNAG | 3 cut(s) | 130, 266, 284 |
| Hsp92II | CATG | 3 cut(s) | 95, 506, 539 |
| Ksp22I | TGATCA | 1 cut(s) | 517 |
| Kzo9I | GATC | 7 cut(s) | 4, 58, 110, 199, 451, 517, 568 |
| LmnI | GCTCC | 1 cut(s) | 301 |
| LpnPI | CCDG | 4 cut(s) | 21, 61, 132, 498 |
| Lsp1109I | GCAGC | 1 cut(s) | 353 |
| LweI | GCATC | 2 cut(s) | 180, 508 |
| MaeI | CTAG | 1 cut(s) | 257 |
| MaeIII | GTNAC | 1 cut(s) | 68 |
| MalI | GATC | 7 cut(s) | 6, 60, 112, 201, 453, 519, 570 |
| MboI | GATC | 7 cut(s) | 4, 58, 110, 199, 451, 517, 568 |
| MboII | GAAGA | 5 cut(s) | 137, 388, 490, 538, 578 |
| MflI | RGATCY | 3 cut(s) | 4, 58, 568 |
| MhlI | GDGCHC | 1 cut(s) | 426 |
| MluCI | AATT | 1 cut(s) | 171 |
| MlyI | GAGTC | 1 cut(s) | 368 |
| MmeI | TCCRAC | 2 cut(s) | 177, 356 |
| MnlI | CCTC | 1 cut(s) | 265 |
| MseI | TTAA | 1 cut(s) | 573 |
| MspI | CCGG | 1 cut(s) | 48 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 430 |
| NdeII | GATC | 7 cut(s) | 4, 58, 110, 199, 451, 517, 568 |
| NlaIII | CATG | 3 cut(s) | 95, 506, 539 |
| NlaIV | GGNNCC | 1 cut(s) | 6 |
| NmuCI | GTSAC | 1 cut(s) | 68 |
| PagI | TCATGA | 1 cut(s) | 502 |
| PfeI | GAWTC | 2 cut(s) | 328, 506 |
| PinAI | ACCGGT | 1 cut(s) | 47 |
| PkrI | GCNGC | 1 cut(s) | 343 |
| PleI | GAGTC | 1 cut(s) | 367 |
| PpsI | GAGTC | 1 cut(s) | 367 |
| PspN4I | GGNNCC | 1 cut(s) | 6 |
| PspPI | GGNCC | 1 cut(s) | 32 |
| PsuI | RGATCY | 3 cut(s) | 4, 58, 568 |
| RsaI | GTAC | 1 cut(s) | 217 |
| RsaNI | GTAC | 1 cut(s) | 216 |
| SaqAI | TTAA | 1 cut(s) | 573 |
| SatI | GCNGC | 1 cut(s) | 342 |
| Sau3AI | GATC | 7 cut(s) | 4, 58, 110, 199, 451, 517, 568 |
| Sau96I | GGNCC | 1 cut(s) | 32 |
| SchI | GAGTC | 1 cut(s) | 368 |
| SduI | GDGCHC | 1 cut(s) | 426 |
| SetI | ASST | 3 cut(s) | 45, 258, 298 |
| SfaNI | GCATC | 2 cut(s) | 180, 508 |
| SfcI | CTRYAG | 1 cut(s) | 54 |
| SinI | GGWCC | 1 cut(s) | 32 |
| Sse9I | AATT | 1 cut(s) | 171 |
| SspMI | CTAG | 1 cut(s) | 257 |
| TaqI | TCGA | 3 cut(s) | 454, 509, 524 |
| TasI | AATT | 1 cut(s) | 171 |
| TatI | WGTACW | 1 cut(s) | 215 |
| TfiI | GAWTC | 2 cut(s) | 328, 506 |
| Tru1I | TTAA | 1 cut(s) | 573 |
| Tru9I | TTAA | 1 cut(s) | 573 |
| TseFI | GTSAC | 1 cut(s) | 68 |
| TseI | GCWGC | 1 cut(s) | 341 |
| Tsp45I | GTSAC | 1 cut(s) | 68 |
| TspDTI | ATGAA | 4 cut(s) | 137, 519, 552, 579 |
| VpaK11BI | GGWCC | 1 cut(s) | 32 |
| XspI | CTAG | 1 cut(s) | 257 |