mediator of RNA polymerase II transcription subunit
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G12230 AT5G19480 AT5G19480 AT5G19480 AT5G19480 |
| fragaria_vesca | FvH4_2g17320 |
| malus_domestica | MD05G1152100.v1.1 MD10G1146700.v1.1 |
| prunus_persica | Prupe.8G184800_v2.0.a1 |
| pyrus_communis | pycom05g14670 |
| rosa_chinensis | RchiOBHm_Chr6g0281841 |
| rosa_laevigata | RLG00000012925 |
| rosa_multiflora | Rmu_sc0001992.1_g000014 Rmu_ssc0000126.1_g000034 |
| rosa_roxburghii | Rroxscaffold_7G00186740 |
| rosa_rugosa | Rorug06G0143900 Rorug06G0144000 Rorug06G0144100 |
| rosa_samantha | Rh6AG257100 Rh6BG260200 Rh6CG259200 Rh6DG251300 |
| rosa_wichuraiana | Rw6G022270 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 50 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 154 |
| AclWI | GGATC | 2 cut(s) | 12, 207 |
| AcuI | CTGAAG | 1 cut(s) | 30 |
| AdeI | CACNNNGTG | 1 cut(s) | 154 |
| AfaI | GTAC | 1 cut(s) | 217 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 154 |
| AjnI | CCWGG | 1 cut(s) | 224 |
| AluBI | AGCT | 2 cut(s) | 43, 387 |
| AluI | AGCT | 2 cut(s) | 43, 387 |
| Alw21I | GWGCWC | 1 cut(s) | 389 |
| Alw26I | GTCTC | 3 cut(s) | 156, 287, 355 |
| AlwI | GGATC | 2 cut(s) | 12, 207 |
| AoxI | GGCC | 2 cut(s) | 276, 415 |
| AspA2I | CCTAGG | 1 cut(s) | 451 |
| AspS9I | GGNCC | 2 cut(s) | 32, 415 |
| AvaII | GGWCC | 1 cut(s) | 32 |
| AvrII | CCTAGG | 1 cut(s) | 451 |
| BamHI | GGATCC | 1 cut(s) | 4 |
| BanI | GGYRCC | 1 cut(s) | 50 |
| BanII | GRGCYC | 1 cut(s) | 389 |
| Bbv12I | GWGCWC | 1 cut(s) | 389 |
| BccI | CCATC | 2 cut(s) | 322, 326 |
| BceAI | ACGGC | 1 cut(s) | 38 |
| BciT130I | CCWGG | 1 cut(s) | 226 |
| BciVI | GTATCC | 1 cut(s) | 223 |
| BcoDI | GTCTC | 3 cut(s) | 156, 287, 355 |
| BfaI | CTAG | 3 cut(s) | 260, 395, 452 |
| BfuI | GTATCC | 1 cut(s) | 223 |
| BglII | AGATCT | 2 cut(s) | 58, 343 |
| BlnI | CCTAGG | 1 cut(s) | 451 |
| Bme1390I | CCNGG | 1 cut(s) | 226 |
| Bme18I | GGWCC | 1 cut(s) | 32 |
| BmgT120I | GGNCC | 2 cut(s) | 32, 415 |
| BmiI | GGNNCC | 3 cut(s) | 6, 52, 416 |
| BmrFI | CCNGG | 1 cut(s) | 226 |
| BpuEI | CTTGAG | 1 cut(s) | 461 |
| BsaBI | GATNNNNATC | 1 cut(s) | 342 |
| BsaJI | CCNNGG | 2 cut(s) | 225, 451 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 154 |
| Bse1I | ACTGG | 1 cut(s) | 52 |
| Bse8I | GATNNNNATC | 1 cut(s) | 342 |
| BseBI | CCWGG | 1 cut(s) | 226 |
| BseDI | CCNNGG | 2 cut(s) | 225, 451 |
| BseJI | GATNNNNATC | 1 cut(s) | 342 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 154 |
| BseMII | CTCAG | 1 cut(s) | 283 |
| BseNI | ACTGG | 1 cut(s) | 52 |
| BshFI | GGCC | 2 cut(s) | 278, 417 |
| BshNI | GGYRCC | 1 cut(s) | 50 |
| BsiHKAI | GWGCWC | 1 cut(s) | 389 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 154 |
| BsmAI | GTCTC | 3 cut(s) | 156, 287, 355 |
| BsmI | GAATGC | 1 cut(s) | 195 |
| BsnI | GGCC | 2 cut(s) | 278, 417 |
| Bsp1286I | GDGCHC | 1 cut(s) | 389 |
| Bsp143I | GATC | 4 cut(s) | 4, 58, 199, 343 |
| BspANI | GGCC | 2 cut(s) | 278, 417 |
| BspCNI | CTCAG | 1 cut(s) | 282 |
| BspLI | GGNNCC | 3 cut(s) | 6, 52, 416 |
| BspPI | GGATC | 2 cut(s) | 12, 207 |
| BspT107I | GGYRCC | 1 cut(s) | 50 |
| BsrI | ACTGG | 1 cut(s) | 52 |
| BssECI | CCNNGG | 2 cut(s) | 225, 451 |
| BssMI | GATC | 4 cut(s) | 4, 58, 199, 343 |
| BssT1I | CCWWGG | 1 cut(s) | 451 |
| Bst2UI | CCWGG | 1 cut(s) | 226 |
| Bst6I | CTCTTC | 1 cut(s) | 22 |
| BstC8I | GCNNGC | 2 cut(s) | 84, 107 |
| BstDEI | CTNAG | 1 cut(s) | 269 |
| BstKTI | GATC | 4 cut(s) | 7, 61, 202, 346 |
| BstMAI | GTCTC | 3 cut(s) | 156, 287, 355 |
| BstMBI | GATC | 4 cut(s) | 4, 58, 199, 343 |
| BstNI | CCWGG | 1 cut(s) | 226 |
| BstSCI | CCNGG | 1 cut(s) | 224 |
| BstX2I | RGATCY | 3 cut(s) | 4, 58, 343 |
| BstYI | RGATCY | 3 cut(s) | 4, 58, 343 |
| BsuI | GTATCC | 1 cut(s) | 223 |
| BsuRI | GGCC | 2 cut(s) | 278, 417 |
| Cac8I | GCNNGC | 2 cut(s) | 84, 107 |
| Cfr13I | GGNCC | 2 cut(s) | 32, 415 |
| Csp6I | GTAC | 1 cut(s) | 216 |
| CviAII | CATG | 2 cut(s) | 92, 329 |
| CviJI | RGCY | 5 cut(s) | 43, 250, 278, 387, 417 |
| CviKI_1 | RGCY | 5 cut(s) | 43, 250, 278, 387, 417 |
| CviQI | GTAC | 1 cut(s) | 216 |
| DdeI | CTNAG | 1 cut(s) | 269 |
| DpnI | GATC | 4 cut(s) | 6, 60, 201, 345 |
| DpnII | GATC | 4 cut(s) | 4, 58, 199, 343 |
| DraIII | CACNNNGTG | 1 cut(s) | 154 |
| Eam1104I | CTCTTC | 1 cut(s) | 22 |
| EarI | CTCTTC | 1 cut(s) | 22 |
| Ecl136II | GAGCTC | 1 cut(s) | 387 |
| Eco130I | CCWWGG | 1 cut(s) | 451 |
| Eco147I | AGGCCT | 1 cut(s) | 278 |
| Eco24I | GRGCYC | 1 cut(s) | 389 |
| Eco47I | GGWCC | 1 cut(s) | 32 |
| Eco53kI | GAGCTC | 1 cut(s) | 387 |
| Eco57I | CTGAAG | 1 cut(s) | 30 |
| EcoICRI | GAGCTC | 1 cut(s) | 387 |
| EcoO109I | RGGNCCY | 1 cut(s) | 415 |
| EcoRII | CCWGG | 1 cut(s) | 224 |
| EcoT14I | CCWWGG | 1 cut(s) | 451 |
| EcoT38I | GRGCYC | 1 cut(s) | 389 |
| ErhI | CCWWGG | 1 cut(s) | 451 |
| FaeI | CATG | 2 cut(s) | 95, 332 |
| FaiI | YATR | 6 cut(s) | 65, 93, 144, 220, 330, 381 |
| FatI | CATG | 2 cut(s) | 91, 328 |
| FriOI | GRGCYC | 1 cut(s) | 389 |
| FspBI | CTAG | 3 cut(s) | 260, 395, 452 |
| HaeIII | GGCC | 2 cut(s) | 278, 417 |
| Hin1II | CATG | 2 cut(s) | 95, 332 |
| Hpy188I | TCNGA | 6 cut(s) | 133, 176, 213, 272, 360, 427 |
| Hpy188III | TCNNGA | 2 cut(s) | 8, 440 |
| HpyAV | CCTTC | 2 cut(s) | 5, 289 |
| HpyCH4V | TGCA | 3 cut(s) | 82, 105, 193 |
| HpyF3I | CTNAG | 1 cut(s) | 269 |
| Hsp92II | CATG | 2 cut(s) | 95, 332 |
| Kzo9I | GATC | 4 cut(s) | 4, 58, 199, 343 |
| LmnI | GCTCC | 2 cut(s) | 14, 304 |
| LpnPI | CCDG | 5 cut(s) | 21, 33, 132, 211, 238 |
| MaeI | CTAG | 3 cut(s) | 260, 395, 452 |
| MaeIII | GTNAC | 1 cut(s) | 68 |
| MalI | GATC | 4 cut(s) | 6, 60, 201, 345 |
| MboI | GATC | 4 cut(s) | 4, 58, 199, 343 |
| MboII | GAAGA | 2 cut(s) | 39, 353 |
| MfeI | CAATTG | 1 cut(s) | 194 |
| MflI | RGATCY | 3 cut(s) | 4, 58, 343 |
| MhlI | GDGCHC | 1 cut(s) | 389 |
| MluCI | AATT | 3 cut(s) | 77, 126, 194 |
| MmeI | TCCRAC | 1 cut(s) | 307 |
| MnlI | CCTC | 5 cut(s) | 23, 178, 249, 268, 405 |
| MseI | TTAA | 2 cut(s) | 288, 348 |
| MspR9I | CCNGG | 1 cut(s) | 226 |
| MunI | CAATTG | 1 cut(s) | 194 |
| Mva1269I | GAATGC | 1 cut(s) | 195 |
| MvaI | CCWGG | 1 cut(s) | 226 |
| NdeII | GATC | 4 cut(s) | 4, 58, 199, 343 |
| NlaIII | CATG | 2 cut(s) | 95, 332 |
| NlaIV | GGNNCC | 3 cut(s) | 6, 52, 416 |
| NmuCI | GTSAC | 1 cut(s) | 68 |
| PceI | AGGCCT | 1 cut(s) | 278 |
| PctI | GAATGC | 1 cut(s) | 195 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 154 |
| Psp124BI | GAGCTC | 1 cut(s) | 389 |
| Psp6I | CCWGG | 1 cut(s) | 224 |
| PspGI | CCWGG | 1 cut(s) | 224 |
| PspN4I | GGNNCC | 3 cut(s) | 6, 52, 416 |
| PspPI | GGNCC | 2 cut(s) | 32, 415 |
| PsuI | RGATCY | 3 cut(s) | 4, 58, 343 |
| RsaI | GTAC | 1 cut(s) | 217 |
| RsaNI | GTAC | 1 cut(s) | 216 |
| SacI | GAGCTC | 1 cut(s) | 389 |
| SaqAI | TTAA | 2 cut(s) | 288, 348 |
| Sau3AI | GATC | 4 cut(s) | 4, 58, 199, 343 |
| Sau96I | GGNCC | 2 cut(s) | 32, 415 |
| ScrFI | CCNGG | 1 cut(s) | 226 |
| SduI | GDGCHC | 1 cut(s) | 389 |
| SetI | ASST | 5 cut(s) | 45, 241, 261, 389, 453 |
| SinI | GGWCC | 1 cut(s) | 32 |
| SmlI | CTYRAG | 1 cut(s) | 440 |
| SmoI | CTYRAG | 1 cut(s) | 440 |
| Sse9I | AATT | 3 cut(s) | 77, 126, 194 |
| SseBI | AGGCCT | 1 cut(s) | 278 |
| SspMI | CTAG | 3 cut(s) | 260, 395, 452 |
| SstI | GAGCTC | 1 cut(s) | 389 |
| StuI | AGGCCT | 1 cut(s) | 278 |
| StyD4I | CCNGG | 1 cut(s) | 224 |
| StyI | CCWWGG | 1 cut(s) | 451 |
| TaqI | TCGA | 1 cut(s) | 241 |
| TasI | AATT | 3 cut(s) | 77, 126, 194 |
| TatI | WGTACW | 1 cut(s) | 215 |
| Tru1I | TTAA | 2 cut(s) | 288, 348 |
| Tru9I | TTAA | 2 cut(s) | 288, 348 |
| TseFI | GTSAC | 1 cut(s) | 68 |
| Tsp45I | GTSAC | 1 cut(s) | 68 |
| TspDTI | ATGAA | 3 cut(s) | 354, 411, 414 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 154 |
| VpaK11BI | GGWCC | 1 cut(s) | 32 |
| XmaJI | CCTAGG | 1 cut(s) | 451 |
| XspI | CTAG | 3 cut(s) | 260, 395, 452 |