Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp08

Orthogroup ID

OG0014593

Physical Location & Seq

Genomic Coordinates Forward (+)

18412697 .. 18414625

Gene Structure 1929 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.8G187100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 714 bp

ATGGATGCTCTGTCGTGGGATGGAACCCTCACGTCACGTGACTTTCTTGTTTCTGCACGTGCTTTTGCCGAGAAATGGAAGGAATTCAACTCTGCCTTCCCTCCATGGACGTGGGTTCCTTGTCCTCCTAAACAACCACCTTGTCATCTCCCTCAGTTGTTGCAGCAGGGCTACTTGTCACTGGAGAAGATATGCCTTCCTGGGTCAAGCAAGAAAGGACACGTGACTTCTCAAGAAGATGTTGATGAAATAAGTCTTACTGAGGGAGAAGAGGAGTTTGAACCTGTTGATAATGCCACACTGGTTGAGACCAACAACAGTCTACAAGTATGTTACTATGATTTCCATATTGTGTACAGCGATTCGTATCGAGTTCCGGTACTGTATTTTCGCGGTTACTACATCGATGGTCAGCCTTTGGCATTGGATGAAATTGAAAAAGACCTACCTGCATGCTCAGCAAAGGTGTTACTGGAGTCAAAATGGACGTTTATAACTCAGGAGGAGCATCCTTACCTGAACAGACCATGGTACAAGTTGCATCCATGTGGTACCAGTGAGTGGATGAAGCTGCTTTTCCTCAGCGATGATTCTCGGGCGAAAATTGGGGTAGCAGTTGAACAATATTTGGTGTCTTGGCTCTCAGTTGTTGGTCAAGTGGTTGGTATTAGAATCCCTTTTGAAATGCTGAACAATCCTAAAAGTTGTAATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004839 GO:0006464 GO:0006807 GO:0006914 GO:0006950 GO:0006952 GO:0006995 GO:0007154 GO:0008150 GO:0008152 GO:0008641 GO:0009056 GO:0009267 GO:0009605 GO:0009607 GO:0009617 GO:0009620 GO:0009893 GO:0009894 GO:0009896 GO:0009987 GO:0009991 GO:0010506 GO:0010508 GO:0010638 GO:0016239 GO:0016241 GO:0016567 GO:0016874 GO:0016877 GO:0019222 GO:0019538 GO:0031323 GO:0031325 GO:0031329 GO:0031331 GO:0031667 GO:0031668 GO:0031669 GO:0032446 GO:0033043 GO:0033059 GO:0033554 GO:0036211 GO:0042594 GO:0042742 GO:0043170 GO:0043207 GO:0043412 GO:0043473 GO:0043476 GO:0043482 GO:0043562 GO:0044087 GO:0044088 GO:0044089 GO:0044090 GO:0044237 GO:0044238 GO:0044248 GO:0044260 GO:0044267 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051128 GO:0051130 GO:0051704 GO:0051707 GO:0051716 GO:0061919 GO:0065007 GO:0070647 GO:0071496 GO:0071704 GO:0090549 GO:0098542 GO:1901564 GO:1902115 GO:1902117 GO:2000785 GO:2000786

KEGG Pathways

Metabolic & Signaling

ko04136 ko04138 ko04140 map04136 map04138 map04140

Pfam Domains

Protein Families

Autophagy_act_C

Protein Analysis

238

Amino Acids

27.13

Weight (kDa)

4.84

Isoelectric Point (pI)

43.69

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0014593)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G07525 AT3G07525
fragaria_vesca	FvH4_2g17490
malus_domestica	MD05G1153700.v1.1 MD10G1148000.v1.1
prunus_persica	Prupe.8G187100_v2.0.a1
pyrus_communis	pycom10g12810
rosa_chinensis	RchiOBHm_Chr6g0282211
rosa_laevigata	RLG00000012901
rosa_multiflora	Rmu_sc0011940.1_g000010 Rmu_sc0014549.1_g000006
rosa_roxburghii	Rroxscaffold_7G00186400
rosa_rugosa	Rorug06G0146200
rosa_samantha	Rh6AG259400 Rh6BG262700 Rh6CG261600
rosa_wichuraiana	Rw6G022440

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	494
Acc36I	ACCTGC	1 cut(s)	457
Acc65I	GGTACC	1 cut(s)	551
AccB1I	GGYRCC	1 cut(s)	551
AccB7I	CCANNNNNTGG	1 cut(s)	561
AccI	GTMKAC	1 cut(s)	322
AccII	CGCG	1 cut(s)	393
AciI	CCGC	1 cut(s)	393
AcsI	RAATTY	1 cut(s)	83
AcvI	CACGTG	3 cut(s)	38, 59, 223
AfaI	GTAC	4 cut(s)	356, 381, 533, 553
AfiI	CCNNNNNNNGG	2 cut(s)	75, 561
AflIII	ACRYGT	1 cut(s)	220
AgsI	TTSAA	5 cut(s)	88, 281, 437, 620, 683
AjiI	CACGTC	2 cut(s)	33, 111
AjnI	CCWGG	1 cut(s)	199
AluBI	AGCT	1 cut(s)	571
AluI	AGCT	1 cut(s)	571
Alw26I	GTCTC	1 cut(s)	302
Ama87I	CYCGRG	1 cut(s)	594
ApeKI	GCWGC	2 cut(s)	163, 571
ApoI	RAATTY	1 cut(s)	83
Asp700I	GAANNNNTTC	1 cut(s)	83
Asp718I	GGTACC	1 cut(s)	551
AvaI	CYCGRG	1 cut(s)	594
BanI	GGYRCC	1 cut(s)	551
BbrPI	CACGTG	3 cut(s)	38, 59, 223
BbvCI	CCTCAGC	1 cut(s)	581
BbvI	GCAGC	2 cut(s)	175, 558
BccI	CCATC	2 cut(s)	14, 401
BciT130I	CCWGG	1 cut(s)	201
BcoDI	GTCTC	1 cut(s)	302
BfuAI	ACCTGC	1 cut(s)	457
BisI	GCNGC	2 cut(s)	164, 572
BlpI	GCTNAGC	1 cut(s)	457
BlsI	GCNGC	2 cut(s)	165, 573
Bme1390I	CCNGG	1 cut(s)	201
BmeT110I	CYCGRG	1 cut(s)	594
BmgBI	CACGTC	2 cut(s)	33, 111
BmiI	GGNNCC	3 cut(s)	25, 117, 553
BmrFI	CCNGG	1 cut(s)	201
BmsI	GCATC	2 cut(s)	517, 550
BpmI	CTGGAG	2 cut(s)	203, 494
Bpu10I	CCTNAGC	1 cut(s)	581
Bpu1102I	GCTNAGC	1 cut(s)	457
BpuEI	CTTGAG	1 cut(s)	216
Bsa29I	ATCGAT	1 cut(s)	405
BsaAI	YACGTR	3 cut(s)	38, 59, 223
BsaBI	GATNNNNATC	1 cut(s)	366
BsaI	GGTCTC	1 cut(s)	302
BsaJI	CCNNGG	3 cut(s)	104, 200, 527
BsaWI	WCCGGW	1 cut(s)	376
Bsc4I	CCNNNNNNNGG	2 cut(s)	75, 561
Bse1I	ACTGG	4 cut(s)	186, 306, 477, 555
Bse8I	GATNNNNATC	1 cut(s)	366
BseBI	CCWGG	1 cut(s)	201
BseCI	ATCGAT	1 cut(s)	405
BseDI	CCNNGG	3 cut(s)	104, 200, 527
BseGI	GGATG	6 cut(s)	10, 25, 433, 508, 541, 570
BseJI	GATNNNNATC	1 cut(s)	366
BseLI	CCNNNNNNNGG	2 cut(s)	75, 561
BseMII	CTCAG	6 cut(s)	167, 252, 471, 512, 595, 657
BseNI	ACTGG	4 cut(s)	186, 306, 477, 555
BseRI	GAGGAG	2 cut(s)	287, 518
BseXI	GCAGC	2 cut(s)	175, 558
BsgI	GTGCAG	1 cut(s)	39
Bsh1236I	CGCG	1 cut(s)	393
BshNI	GGYRCC	1 cut(s)	551
BshVI	ATCGAT	1 cut(s)	405
BsiHKCI	CYCGRG	1 cut(s)	594
BsiSI	CCGG	1 cut(s)	377
BslI	CCNNNNNNNGG	2 cut(s)	75, 561
BsmAI	GTCTC	1 cut(s)	302
Bso31I	GGTCTC	1 cut(s)	302
BsoBI	CYCGRG	1 cut(s)	594
Bsp1407I	TGTACA	1 cut(s)	354
Bsp1720I	GCTNAGC	1 cut(s)	457
Bsp19I	CCATGG	2 cut(s)	104, 527
BspACI	CCGC	1 cut(s)	393
BspCNI	CTCAG	6 cut(s)	166, 253, 470, 511, 594, 656
BspDI	ATCGAT	1 cut(s)	405
BspFNI	CGCG	1 cut(s)	393
BspLI	GGNNCC	3 cut(s)	25, 117, 553
BspMI	ACCTGC	1 cut(s)	457
BspT107I	GGYRCC	1 cut(s)	551
BspTNI	GGTCTC	1 cut(s)	302
BsrGI	TGTACA	1 cut(s)	354
BsrI	ACTGG	4 cut(s)	186, 306, 477, 555
BssECI	CCNNGG	3 cut(s)	104, 200, 527
BssT1I	CCWWGG	2 cut(s)	104, 527
Bst2UI	CCWGG	1 cut(s)	201
Bst4CI	ACNGT	2 cut(s)	320, 384
Bst6I	CTCTTC	1 cut(s)	264
BstAUI	TGTACA	1 cut(s)	354
BstBAI	YACGTR	3 cut(s)	38, 59, 223
BstC8I	GCNNGC	1 cut(s)	454
BstDEI	CTNAG	6 cut(s)	153, 261, 457, 498, 581, 643
BstDSI	CCRYGG	2 cut(s)	104, 527
BstF5I	GGATG	6 cut(s)	10, 25, 433, 508, 541, 570
BstFNI	CGCG	1 cut(s)	393
BstMAI	GTCTC	1 cut(s)	302
BstMWI	GCNNNNNNNGC	1 cut(s)	458
BstNI	CCWGG	1 cut(s)	201
BstNSI	RCATGY	1 cut(s)	456
BstSCI	CCNGG	1 cut(s)	199
BstUI	CGCG	1 cut(s)	393
BstV1I	GCAGC	2 cut(s)	175, 558
BstXI	CCANNNNNNTGG	1 cut(s)	111
Bsu15I	ATCGAT	1 cut(s)	405
BsuTUI	ATCGAT	1 cut(s)	405
BtgI	CCRYGG	2 cut(s)	104, 527
BtgZI	GCGATG	1 cut(s)	600
BtrI	CACGTC	2 cut(s)	33, 111
BtsCI	GGATG	6 cut(s)	10, 25, 433, 508, 541, 570
BtsIMutI	CAGTG	3 cut(s)	179, 299, 562
BveI	ACCTGC	1 cut(s)	457
Cac8I	GCNNGC	1 cut(s)	454
ClaI	ATCGAT	1 cut(s)	405
Csp6I	GTAC	4 cut(s)	355, 380, 532, 552
CspCI	CAANNNNNGTGG	2 cut(s)	286, 321
CviAII	CATG	4 cut(s)	105, 453, 528, 546
CviJI	RGCY	4 cut(s)	171, 415, 571, 640
CviKI_1	RGCY	4 cut(s)	171, 415, 571, 640
CviQI	GTAC	4 cut(s)	355, 380, 532, 552
DdeI	CTNAG	6 cut(s)	153, 261, 457, 498, 581, 643
Eam1104I	CTCTTC	1 cut(s)	264
EarI	CTCTTC	1 cut(s)	264
Eco130I	CCWWGG	2 cut(s)	104, 527
Eco31I	GGTCTC	1 cut(s)	302
Eco72I	CACGTG	3 cut(s)	38, 59, 223
Eco88I	CYCGRG	1 cut(s)	594
EcoRI	GAATTC	1 cut(s)	83
EcoRII	CCWGG	1 cut(s)	199
EcoT14I	CCWWGG	2 cut(s)	104, 527
ErhI	CCWWGG	2 cut(s)	104, 527
FaeI	CATG	4 cut(s)	108, 456, 531, 549
FaiI	YATR	9 cut(s)	106, 193, 331, 339, 348, 454, 494, 529, 547
FatI	CATG	4 cut(s)	104, 452, 527, 545
FblI	GTMKAC	1 cut(s)	322
Fnu4HI	GCNGC	2 cut(s)	164, 572
FokI	GGATG	6 cut(s)	17, 32, 440, 495, 528, 577
Fsp4HI	GCNGC	2 cut(s)	164, 572
GluI	GCNGC	2 cut(s)	164, 572
GsuI	CTGGAG	2 cut(s)	203, 494
HapII	CCGG	1 cut(s)	377
Hin1II	CATG	4 cut(s)	108, 456, 531, 549
HinfI	GANTC	4 cut(s)	362, 476, 590, 672
HpaII	CCGG	1 cut(s)	377
Hpy166II	GTNNAC	2 cut(s)	323, 355
Hpy188III	TCNNGA	2 cut(s)	233, 500
Hpy8I	GTNNAC	2 cut(s)	323, 355
HpyAV	CCTTC	3 cut(s)	73, 106, 206
HpyCH4III	ACNGT	2 cut(s)	320, 384
HpyCH4IV	ACGT	6 cut(s)	32, 37, 58, 110, 222, 488
HpyCH4V	TGCA	4 cut(s)	56, 163, 452, 541
HpyF10VI	GCNNNNNNNGC	1 cut(s)	458
HpyF3I	CTNAG	6 cut(s)	153, 261, 457, 498, 581, 643
HpySE526I	ACGT	6 cut(s)	32, 37, 58, 110, 222, 488
Hsp92II	CATG	4 cut(s)	108, 456, 531, 549
KpnI	GGTACC	1 cut(s)	555
LmnI	GCTCC	1 cut(s)	505
Lsp1109I	GCAGC	2 cut(s)	175, 558
LweI	GCATC	2 cut(s)	517, 550
MaeII	ACGT	6 cut(s)	32, 37, 58, 110, 222, 488
MaeIII	GTNAC	7 cut(s)	33, 38, 177, 223, 332, 395, 468
MboII	GAAGA	3 cut(s)	199, 248, 281
MluCI	AATT	4 cut(s)	83, 432, 603, 709
MlyI	GAGTC	1 cut(s)	485
MnlI	CCTC	8 cut(s)	38, 111, 135, 162, 256, 265, 496, 590
MroXI	GAANNNNTTC	1 cut(s)	83
MslI	CAYNNNNRTG	2 cut(s)	109, 546
MspI	CCGG	1 cut(s)	377
MspR9I	CCNGG	1 cut(s)	201
MvaI	CCWGG	1 cut(s)	201
MvnI	CGCG	1 cut(s)	393
MwoI	GCNNNNNNNGC	1 cut(s)	458
NcoI	CCATGG	2 cut(s)	104, 527
NlaIII	CATG	4 cut(s)	108, 456, 531, 549
NlaIV	GGNNCC	3 cut(s)	25, 117, 553
NmeAIII	GCCGAG	1 cut(s)	94
NmuCI	GTSAC	4 cut(s)	33, 38, 177, 223
NspI	RCATGY	1 cut(s)	456
PaeI	GCATGC	1 cut(s)	456
PdmI	GAANNNNTTC	1 cut(s)	83
PfeI	GAWTC	3 cut(s)	362, 590, 672
PflMI	CCANNNNNTGG	1 cut(s)	561
PkrI	GCNGC	2 cut(s)	165, 573
PleI	GAGTC	1 cut(s)	484
PmaCI	CACGTG	3 cut(s)	38, 59, 223
PmlI	CACGTG	3 cut(s)	38, 59, 223
PpsI	GAGTC	1 cut(s)	484
Ppu21I	YACGTR	3 cut(s)	38, 59, 223
PsiI	TTATAA	1 cut(s)	494
Psp6I	CCWGG	1 cut(s)	199
PspCI	CACGTG	3 cut(s)	38, 59, 223
PspGI	CCWGG	1 cut(s)	199
PspN4I	GGNNCC	3 cut(s)	25, 117, 553
RsaI	GTAC	4 cut(s)	356, 381, 533, 553
RsaNI	GTAC	4 cut(s)	355, 380, 532, 552
RseI	CAYNNNNRTG	2 cut(s)	109, 546
SatI	GCNGC	2 cut(s)	164, 572
SchI	GAGTC	1 cut(s)	485
ScrFI	CCNGG	1 cut(s)	201
SfaNI	GCATC	2 cut(s)	517, 550
SmiMI	CAYNNNNRTG	2 cut(s)	109, 546
SmlI	CTYRAG	1 cut(s)	231
SmoI	CTYRAG	1 cut(s)	231
SphI	GCATGC	1 cut(s)	456
Sse9I	AATT	4 cut(s)	83, 432, 603, 709
SsiI	CCGC	1 cut(s)	393
SspI	AATATT	1 cut(s)	626
StyD4I	CCNGG	1 cut(s)	199
StyI	CCWWGG	2 cut(s)	104, 527
TaaI	ACNGT	2 cut(s)	320, 384
TaiI	ACGT	6 cut(s)	35, 40, 61, 113, 225, 491
TaqI	TCGA	2 cut(s)	370, 405
TasI	AATT	4 cut(s)	83, 432, 603, 709
TatI	WGTACW	1 cut(s)	354
TfiI	GAWTC	3 cut(s)	362, 590, 672
TscAI	CASTG	3 cut(s)	186, 306, 562
TseFI	GTSAC	4 cut(s)	33, 38, 177, 223
TseI	GCWGC	2 cut(s)	163, 571
Tsp45I	GTSAC	4 cut(s)	33, 38, 177, 223
TspDTI	ATGAA	3 cut(s)	261, 444, 581
TspRI	CASTG	3 cut(s)	186, 306, 562
Van91I	CCANNNNNTGG	1 cut(s)	561
XapI	RAATTY	1 cut(s)	83
XceI	RCATGY	1 cut(s)	456
XmiI	GTMKAC	1 cut(s)	322
XmnI	GAANNNNTTC	1 cut(s)	83

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.