ubiquitin-protein transferase activity
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G44330 AT3G60080 |
| fragaria_vesca | FvH4_7g00020 FvH4_7g00020 |
| malus_domestica | MD02G1319700.v1.1 |
| prunus_persica | Prupe.2G002400_v2.0.a1 Prupe.8G211400_v2.0.a1 |
| pyrus_communis | pycom02g26770 |
| rosa_chinensis | RchiOBHm_Chr1g0313221 |
| rosa_laevigata | RLG00000030812 |
| rosa_multiflora | Rmu_sc0013586.1_g000001 Rmu_sc0027690.1_g000001 |
| rosa_roxburghii | Rroxscaffold_4G00332330 |
| rosa_rugosa | RorugPtG0001800.1 |
| rosa_samantha | Rh1AG001800 Rh1CG004000 Rh1DG001700 |
| rosa_wichuraiana | Rw1G000090 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 282 |
| AciI | CCGC | 1 cut(s) | 111 |
| AcsI | RAATTY | 2 cut(s) | 188, 233 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 117 |
| AgsI | TTSAA | 1 cut(s) | 256 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 67, 99 |
| AluBI | AGCT | 3 cut(s) | 135, 301, 337 |
| AluI | AGCT | 3 cut(s) | 135, 301, 337 |
| Alw21I | GWGCWC | 1 cut(s) | 173 |
| ApeKI | GCWGC | 2 cut(s) | 37, 301 |
| ApoI | RAATTY | 2 cut(s) | 188, 233 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 275 |
| AsuC2I | CCSGG | 1 cut(s) | 118 |
| AsuHPI | GGTGA | 2 cut(s) | 202, 325 |
| AsuII | TTCGAA | 1 cut(s) | 25 |
| BbsI | GAAGAC | 1 cut(s) | 249 |
| Bbv12I | GWGCWC | 1 cut(s) | 173 |
| BbvI | GCAGC | 2 cut(s) | 49, 288 |
| BcnI | CCSGG | 1 cut(s) | 118 |
| BfaI | CTAG | 1 cut(s) | 344 |
| BfuAI | ACCTGC | 1 cut(s) | 282 |
| BisI | GCNGC | 2 cut(s) | 38, 302 |
| BlsI | GCNGC | 2 cut(s) | 39, 303 |
| Bme1390I | CCNGG | 1 cut(s) | 118 |
| BmrFI | CCNGG | 1 cut(s) | 118 |
| BmsI | GCATC | 1 cut(s) | 313 |
| BpiI | GAAGAC | 1 cut(s) | 249 |
| Bpu14I | TTCGAA | 1 cut(s) | 25 |
| BpuMI | CCSGG | 1 cut(s) | 118 |
| BsaJI | CCNNGG | 1 cut(s) | 309 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 192, 222 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 117 |
| BseDI | CCNNGG | 1 cut(s) | 309 |
| BseGI | GGATG | 3 cut(s) | 105, 190, 328 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 117 |
| BseXI | GCAGC | 2 cut(s) | 49, 288 |
| BsgI | GTGCAG | 1 cut(s) | 310 |
| BsiHKAI | GWGCWC | 1 cut(s) | 173 |
| BsiSI | CCGG | 1 cut(s) | 118 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 117 |
| Bsp119I | TTCGAA | 1 cut(s) | 25 |
| Bsp1286I | GDGCHC | 1 cut(s) | 173 |
| BspACI | CCGC | 1 cut(s) | 111 |
| BspMI | ACCTGC | 1 cut(s) | 282 |
| BspT104I | TTCGAA | 1 cut(s) | 25 |
| BssECI | CCNNGG | 1 cut(s) | 309 |
| BssT1I | CCWWGG | 1 cut(s) | 309 |
| Bst6I | CTCTTC | 1 cut(s) | 45 |
| BstBI | TTCGAA | 1 cut(s) | 25 |
| BstC8I | GCNNGC | 3 cut(s) | 17, 133, 227 |
| BstF5I | GGATG | 3 cut(s) | 105, 190, 328 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 226, 288 |
| BstSCI | CCNGG | 1 cut(s) | 116 |
| BstV1I | GCAGC | 2 cut(s) | 49, 288 |
| BstV2I | GAAGAC | 1 cut(s) | 249 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 161 |
| BtsCI | GGATG | 3 cut(s) | 105, 190, 328 |
| BveI | ACCTGC | 1 cut(s) | 282 |
| Cac8I | GCNNGC | 3 cut(s) | 17, 133, 227 |
| CviAII | CATG | 3 cut(s) | 32, 239, 328 |
| CviJI | RGCY | 7 cut(s) | 8, 19, 135, 153, 262, 301, 337 |
| CviKI_1 | RGCY | 7 cut(s) | 8, 19, 135, 153, 262, 301, 337 |
| Eam1104I | CTCTTC | 1 cut(s) | 45 |
| EarI | CTCTTC | 1 cut(s) | 45 |
| Eco130I | CCWWGG | 1 cut(s) | 309 |
| EcoT14I | CCWWGG | 1 cut(s) | 309 |
| ErhI | CCWWGG | 1 cut(s) | 309 |
| FaeI | CATG | 3 cut(s) | 35, 242, 331 |
| FaiI | YATR | 3 cut(s) | 33, 240, 329 |
| FatI | CATG | 3 cut(s) | 31, 238, 327 |
| FauI | CCCGC | 1 cut(s) | 118 |
| Fnu4HI | GCNGC | 2 cut(s) | 38, 302 |
| FokI | GGATG | 3 cut(s) | 92, 197, 335 |
| Fsp4HI | GCNGC | 2 cut(s) | 38, 302 |
| FspBI | CTAG | 1 cut(s) | 344 |
| GluI | GCNGC | 2 cut(s) | 38, 302 |
| HapII | CCGG | 1 cut(s) | 118 |
| Hin1II | CATG | 3 cut(s) | 35, 242, 331 |
| HinfI | GANTC | 1 cut(s) | 140 |
| HpaII | CCGG | 1 cut(s) | 118 |
| HphI | GGTGA | 2 cut(s) | 202, 325 |
| Hpy188I | TCNGA | 1 cut(s) | 196 |
| HpyAV | CCTTC | 1 cut(s) | 313 |
| HpyCH4V | TGCA | 3 cut(s) | 225, 249, 291 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 226, 288 |
| Hsp92II | CATG | 3 cut(s) | 35, 242, 331 |
| LmnI | GCTCC | 1 cut(s) | 58 |
| LpnPI | CCDG | 4 cut(s) | 26, 131, 167, 277 |
| Lsp1109I | GCAGC | 2 cut(s) | 49, 288 |
| LweI | GCATC | 1 cut(s) | 313 |
| MaeI | CTAG | 1 cut(s) | 344 |
| MaeIII | GTNAC | 3 cut(s) | 92, 208, 313 |
| MboII | GAAGA | 6 cut(s) | 56, 59, 62, 84, 87, 254 |
| MhlI | GDGCHC | 1 cut(s) | 173 |
| MluCI | AATT | 2 cut(s) | 188, 233 |
| MnlI | CCTC | 2 cut(s) | 48, 190 |
| MroXI | GAANNNNTTC | 1 cut(s) | 275 |
| MspA1I | CMGCKG | 1 cut(s) | 301 |
| MspI | CCGG | 1 cut(s) | 118 |
| MspR9I | CCNGG | 1 cut(s) | 118 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 226, 288 |
| NciI | CCSGG | 1 cut(s) | 118 |
| NlaIII | CATG | 3 cut(s) | 35, 242, 331 |
| NmuCI | GTSAC | 2 cut(s) | 208, 313 |
| NspV | TTCGAA | 1 cut(s) | 25 |
| PdmI | GAANNNNTTC | 1 cut(s) | 275 |
| PfeI | GAWTC | 1 cut(s) | 140 |
| PkrI | GCNGC | 2 cut(s) | 39, 303 |
| PvuII | CAGCTG | 1 cut(s) | 301 |
| SatI | GCNGC | 2 cut(s) | 38, 302 |
| ScrFI | CCNGG | 1 cut(s) | 118 |
| SduI | GDGCHC | 1 cut(s) | 173 |
| SetI | ASST | 5 cut(s) | 137, 296, 303, 315, 339 |
| SfaNI | GCATC | 1 cut(s) | 313 |
| SfuI | TTCGAA | 1 cut(s) | 25 |
| Sse9I | AATT | 2 cut(s) | 188, 233 |
| SsiI | CCGC | 1 cut(s) | 111 |
| SspMI | CTAG | 1 cut(s) | 344 |
| StyD4I | CCNGG | 1 cut(s) | 116 |
| StyI | CCWWGG | 1 cut(s) | 309 |
| TaqI | TCGA | 3 cut(s) | 25, 125, 143 |
| TasI | AATT | 2 cut(s) | 188, 233 |
| TfiI | GAWTC | 1 cut(s) | 140 |
| TseFI | GTSAC | 2 cut(s) | 208, 313 |
| TseI | GCWGC | 2 cut(s) | 37, 301 |
| Tsp45I | GTSAC | 2 cut(s) | 208, 313 |
| TspDTI | ATGAA | 3 cut(s) | 201, 255, 344 |
| XapI | RAATTY | 2 cut(s) | 188, 233 |
| XmnI | GAANNNNTTC | 1 cut(s) | 275 |
| XspI | CTAG | 1 cut(s) | 344 |