Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp08

Orthogroup ID

OG0010807

Physical Location & Seq

Genomic Coordinates Reverse (-)

20724576 .. 20727588

Gene Structure 3013 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.8G233500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 342 bp

ATGGCGTCCGATACGGCGTCGTCGGTGGACGAACAGGCACAGCTGGTTGCTTCAGTTGGTTCACTTGCAGGAGGAGGAGGCGGCTCCACTGATAACAGAGGAAGGCATCGGATTCTCGCTGAACTCAACCGTCTTGAACAAGAACTCAAATTCTTGCAGGAAGAGTTGGGAGAGCTCGAAAGGACTGAGAACGTTTCGACCATATGTTCAGAATTGCTGCCCTACGCCGAAGGCACGGCGGATCCTCTACTTCCAGTAACAAATGGACCTGTAAATCTATTATGGGATCGATGGTTCGAAGGACCCCAGGATTCACAACGTTGCAGTTGTCGGATACTCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000139 GO:0000166 GO:0001882 GO:0001883 GO:0002376 GO:0003674 GO:0005488 GO:0005525 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0005802 GO:0005834 GO:0005886 GO:0006464 GO:0006497 GO:0006807 GO:0006810 GO:0006950 GO:0006952 GO:0006955 GO:0007275 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009605 GO:0009607 GO:0009620 GO:0009791 GO:0009814 GO:0009817 GO:0009845 GO:0009898 GO:0009914 GO:0009926 GO:0009987 GO:0010541 GO:0010817 GO:0012505 GO:0016020 GO:0017076 GO:0018342 GO:0018345 GO:0019001 GO:0019538 GO:0019897 GO:0019898 GO:0022622 GO:0031090 GO:0031234 GO:0031984 GO:0032501 GO:0032502 GO:0032549 GO:0032550 GO:0032553 GO:0032555 GO:0032561 GO:0032588 GO:0032991 GO:0034645 GO:0035639 GO:0036094 GO:0036211 GO:0042157 GO:0042158 GO:0043167 GO:0043168 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043543 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044425 GO:0044431 GO:0044444 GO:0044446 GO:0044459 GO:0044464 GO:0045087 GO:0048364 GO:0048527 GO:0048528 GO:0048731 GO:0048856 GO:0050832 GO:0050896 GO:0051179 GO:0051234 GO:0051704 GO:0051707 GO:0060918 GO:0065007 GO:0065008 GO:0071704 GO:0071944 GO:0090351 GO:0090696 GO:0097159 GO:0097354 GO:0097367 GO:0098542 GO:0098552 GO:0098562 GO:0098588 GO:0098791 GO:0098796 GO:0098797 GO:0099402 GO:1901265 GO:1901363 GO:1901564 GO:1901566 GO:1901576 GO:1902494 GO:1905360

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

G-gamma

Protein Analysis

114

Amino Acids

12.29

Weight (kDa)

4.43

Isoelectric Point (pI)

52.8

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010807)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G63420 AT3G63420 AT3G63420
fragaria_vesca	FvH4_2g22840
malus_domestica	MD03G1256500.v1.1 MD11G1277200.v1.1
prunus_persica	Prupe.8G233500_v2.0.a1
pyrus_communis	pycom03g20330 pycom11g24520
rosa_chinensis	RchiOBHm_Chr6g0289751
rosa_laevigata	RLG00000012269
rosa_multiflora	Rmu_sc0005640.1_g000016
rosa_roxburghii	Rroxscaffold_7G00177590 Rroxscaffold_7G00178090
rosa_rugosa	Rorug06G0206300
rosa_samantha	Rh6AG318200 Rh6BG325500 Rh6CG331100 Rh6DG316800
rosa_wichuraiana	Rw6G027430

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AciI	CCGC	2 cut(s)	81, 239
AclI	AACGTT	2 cut(s)	192, 319
AclWI	GGATC	3 cut(s)	236, 249, 294
AcsI	RAATTY	1 cut(s)	149
AcuI	CTGAAG	1 cut(s)	36
AcyI	GRCGYC	2 cut(s)	5, 17
AgsI	TTSAA	1 cut(s)	137
AjnI	CCWGG	1 cut(s)	306
AloI	GAACNNNNNNTCC	2 cut(s)	278, 310
AluBI	AGCT	2 cut(s)	43, 175
AluI	AGCT	2 cut(s)	43, 175
Alw21I	GWGCWC	1 cut(s)	177
AlwI	GGATC	3 cut(s)	236, 249, 294
ApeKI	GCWGC	1 cut(s)	217
ApoI	RAATTY	1 cut(s)	149
AspS9I	GGNCC	2 cut(s)	266, 302
AsuII	TTCGAA	1 cut(s)	297
AvaII	GGWCC	2 cut(s)	266, 302
BamHI	GGATCC	1 cut(s)	241
BanII	GRGCYC	1 cut(s)	177
Bbv12I	GWGCWC	1 cut(s)	177
BbvI	GCAGC	1 cut(s)	204
BccI	CCATC	1 cut(s)	285
BceAI	ACGGC	2 cut(s)	30, 252
BciT130I	CCWGG	1 cut(s)	308
BciVI	GTATCC	1 cut(s)	327
BfuI	GTATCC	1 cut(s)	327
BisI	GCNGC	2 cut(s)	82, 218
BlsI	GCNGC	2 cut(s)	83, 219
Bme1390I	CCNGG	1 cut(s)	308
Bme18I	GGWCC	2 cut(s)	266, 302
BmgT120I	GGNCC	2 cut(s)	266, 302
BmiI	GGNNCC	3 cut(s)	85, 243, 304
BmrFI	CCNGG	1 cut(s)	308
BmsI	GCATC	1 cut(s)	115
Bpu14I	TTCGAA	1 cut(s)	297
Bsa29I	ATCGAT	1 cut(s)	289
BsaHI	GRCGYC	2 cut(s)	5, 17
BsaJI	CCNNGG	1 cut(s)	306
Bse1I	ACTGG	1 cut(s)	254
BseBI	CCWGG	1 cut(s)	308
BseCI	ATCGAT	1 cut(s)	289
BseDI	CCNNGG	1 cut(s)	306
BseMII	CTCAG	1 cut(s)	177
BseNI	ACTGG	1 cut(s)	254
BseRI	GAGGAG	2 cut(s)	87, 90
BseXI	GCAGC	1 cut(s)	204
BshVI	ATCGAT	1 cut(s)	289
BsiHKAI	GWGCWC	1 cut(s)	177
Bsp119I	TTCGAA	1 cut(s)	297
Bsp1286I	GDGCHC	1 cut(s)	177
Bsp143I	GATC	2 cut(s)	241, 286
BspACI	CCGC	2 cut(s)	81, 239
BspCNI	CTCAG	1 cut(s)	178
BspDI	ATCGAT	1 cut(s)	289
BspLI	GGNNCC	3 cut(s)	85, 243, 304
BspPI	GGATC	3 cut(s)	236, 249, 294
BspT104I	TTCGAA	1 cut(s)	297
BsrI	ACTGG	1 cut(s)	254
BssECI	CCNNGG	1 cut(s)	306
BssMI	GATC	2 cut(s)	241, 286
BssNI	GRCGYC	2 cut(s)	5, 17
Bst2UI	CCWGG	1 cut(s)	308
Bst4CI	ACNGT	1 cut(s)	131
Bst6I	CTCTTC	1 cut(s)	156
BstACI	GRCGYC	2 cut(s)	5, 17
BstBI	TTCGAA	1 cut(s)	297
BstDEI	CTNAG	1 cut(s)	186
BstKTI	GATC	2 cut(s)	244, 289
BstMBI	GATC	2 cut(s)	241, 286
BstNI	CCWGG	1 cut(s)	308
BstSCI	CCNGG	1 cut(s)	306
BstV1I	GCAGC	1 cut(s)	204
BstX2I	RGATCY	1 cut(s)	241
BstYI	RGATCY	1 cut(s)	241
Bsu15I	ATCGAT	1 cut(s)	289
BsuI	GTATCC	1 cut(s)	327
BsuTUI	ATCGAT	1 cut(s)	289
BtsIMutI	CAGTG	1 cut(s)	87
Cfr13I	GGNCC	2 cut(s)	266, 302
ClaI	ATCGAT	1 cut(s)	289
CseI	GACGC	1 cut(s)	6
CviJI	RGCY	3 cut(s)	43, 84, 175
CviKI_1	RGCY	3 cut(s)	43, 84, 175
DdeI	CTNAG	1 cut(s)	186
DpnI	GATC	2 cut(s)	243, 288
DpnII	GATC	2 cut(s)	241, 286
Eam1104I	CTCTTC	1 cut(s)	156
EarI	CTCTTC	1 cut(s)	156
EciI	GGCGGA	1 cut(s)	254
Ecl136II	GAGCTC	1 cut(s)	175
Eco24I	GRGCYC	1 cut(s)	177
Eco47I	GGWCC	2 cut(s)	266, 302
Eco53kI	GAGCTC	1 cut(s)	175
Eco57I	CTGAAG	1 cut(s)	36
EcoICRI	GAGCTC	1 cut(s)	175
EcoO109I	RGGNCCY	1 cut(s)	302
EcoRII	CCWGG	1 cut(s)	306
EcoT38I	GRGCYC	1 cut(s)	177
FaiI	YATR	3 cut(s)	203, 205, 283
FauNDI	CATATG	1 cut(s)	203
Fnu4HI	GCNGC	2 cut(s)	82, 218
FriOI	GRGCYC	1 cut(s)	177
Fsp4HI	GCNGC	2 cut(s)	82, 218
GluI	GCNGC	2 cut(s)	82, 218
HgaI	GACGC	1 cut(s)	6
Hin1I	GRCGYC	2 cut(s)	5, 17
HinfI	GANTC	2 cut(s)	112, 311
Hpy166II	GTNNAC	2 cut(s)	28, 62
Hpy188I	TCNGA	5 cut(s)	10, 111, 211, 333, 341
Hpy188III	TCNNGA	1 cut(s)	134
Hpy8I	GTNNAC	2 cut(s)	28, 62
Hpy99I	CGWCG	2 cut(s)	22, 25
HpyAV	CCTTC	3 cut(s)	96, 224, 293
HpyCH4III	ACNGT	1 cut(s)	131
HpyCH4IV	ACGT	2 cut(s)	192, 319
HpyCH4V	TGCA	3 cut(s)	68, 157, 324
HpyF3I	CTNAG	1 cut(s)	186
HpySE526I	ACGT	2 cut(s)	192, 319
Hsp92I	GRCGYC	2 cut(s)	5, 17
Kzo9I	GATC	2 cut(s)	241, 286
LmnI	GCTCC	1 cut(s)	89
LpnPI	CCDG	8 cut(s)	20, 29, 54, 143, 267, 282, 293, 320
Lsp1109I	GCAGC	1 cut(s)	204
LweI	GCATC	1 cut(s)	115
MaeII	ACGT	2 cut(s)	192, 319
MaeIII	GTNAC	1 cut(s)	256
MalI	GATC	2 cut(s)	243, 288
MboI	GATC	2 cut(s)	241, 286
MboII	GAAGA	1 cut(s)	173
MflI	RGATCY	1 cut(s)	241
MhlI	GDGCHC	1 cut(s)	177
MluCI	AATT	2 cut(s)	149, 212
MmeI	TCCRAC	1 cut(s)	311
MnlI	CCTC	5 cut(s)	65, 68, 71, 92, 255
MspA1I	CMGCKG	1 cut(s)	43
MspR9I	CCNGG	1 cut(s)	308
MvaI	CCWGG	1 cut(s)	308
NdeI	CATATG	1 cut(s)	203
NdeII	GATC	2 cut(s)	241, 286
NlaIV	GGNNCC	3 cut(s)	85, 243, 304
NspV	TTCGAA	1 cut(s)	297
PfeI	GAWTC	2 cut(s)	112, 311
PkrI	GCNGC	2 cut(s)	83, 219
PpuMI	RGGWCCY	1 cut(s)	302
Psp124BI	GAGCTC	1 cut(s)	177
Psp1406I	AACGTT	2 cut(s)	192, 319
Psp5II	RGGWCCY	1 cut(s)	302
Psp6I	CCWGG	1 cut(s)	306
PspGI	CCWGG	1 cut(s)	306
PspN4I	GGNNCC	3 cut(s)	85, 243, 304
PspPI	GGNCC	2 cut(s)	266, 302
PspPPI	RGGWCCY	1 cut(s)	302
PsuI	RGATCY	1 cut(s)	241
PvuII	CAGCTG	1 cut(s)	43
SacI	GAGCTC	1 cut(s)	177
SatI	GCNGC	2 cut(s)	82, 218
Sau3AI	GATC	2 cut(s)	241, 286
Sau96I	GGNCC	2 cut(s)	266, 302
ScrFI	CCNGG	1 cut(s)	308
SduI	GDGCHC	1 cut(s)	177
SetI	ASST	5 cut(s)	45, 177, 195, 271, 322
SfaNI	GCATC	1 cut(s)	115
SfuI	TTCGAA	1 cut(s)	297
SinI	GGWCC	2 cut(s)	266, 302
Sse9I	AATT	2 cut(s)	149, 212
SsiI	CCGC	2 cut(s)	81, 239
SstI	GAGCTC	1 cut(s)	177
StyD4I	CCNGG	1 cut(s)	306
TaaI	ACNGT	1 cut(s)	131
TaiI	ACGT	2 cut(s)	195, 322
TaqI	TCGA	4 cut(s)	177, 197, 289, 297
TasI	AATT	2 cut(s)	149, 212
TauI	GCSGC	1 cut(s)	84
TfiI	GAWTC	2 cut(s)	112, 311
TscAI	CASTG	1 cut(s)	94
TseI	GCWGC	1 cut(s)	217
TspRI	CASTG	1 cut(s)	94
VpaK11BI	GGWCC	2 cut(s)	266, 302
XapI	RAATTY	1 cut(s)	149

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.