Rorug06G0206300

Guanine nucleotide-binding protein subunit gamma

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000006
OG0010807
Physical Location & Seq
Reverse (-)
32908758 .. 32911885
3128 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug06G0206300.1

Sequence Viewer

Length: 1068 bp
ATGAAGAGTTTAAGCTATGCAATATCTATGGCAGCTGAGAAGCATAAAGTCTATATTGCAATGATCTTCATACAATTCGTGTATGCTGGCATGGCCTTGTTTTCTAAGGCAGCAGTTTCTAAAGGAATGAACCCTTTTGTGTTTGTGGTCTATCGCCAAGCTTTCGCCTTCCTTGCCTTGGCTCCATTTGCTTTCTTCTTTGAAAGCTCAAAAGAAGTTCCTCTTTCCTATACCTTACTCATCAAGATTTTCTTTATTTCCTTATTTGGGATTACACTGAGTTTAAATCTGTACTATGTTGCAATCAACTACACCTCTGCAACTTTTGCTGCAGCCACCACCACTGCAATTCCTGCAATTACTTTTGTTATGGCAGTTTTATTAAGGATGGAAAGCATTTCTATAAAGCATTGGCATGGTGTGGCCAAGGTGTTGGGTTCTGTTACCAGCCTTTCAGGGGCTGTGGTATATGCTTTAATCAAGGGGCCTCCATTAAAGTTCATGAACTGGTTTCCAGAAAATCTAGACCACCAAATCCATCCAAAGAGTTCCTCCAGAGGGGAGTGGATTAAAGGTTCCCTCATTATGCTCTCAGCTAACACTGCTTGGTCTTTGTGGCTAATTTTGCAGGGTCCAATTGTGAAGGAATATCCAGCAAAGTTGAGGCTTACTGCTCTGCAGTGCTTCTTTAGCTGCATGCAGTCTGCTTTCTGGACAATTGCGATTGAGAGAAGGCCTTCAGCTTGGAAGATTGGATGGGACATTCATCTTCTAGCTGTGGTCTACTGTGGTGTAATTGTAACCGGGATTACTTACTGGCTACAAGTTTGGGCCATACAGAAGAAAGGTCCAGTTTTCACAGCAATGTTCGCTCCTTTAGCACTAATTATTACAGCAATATTCTCAGCAATCCTGTGGAAAGAAGCCATCTACTGGGGAAGTATTGGTGGAGGCGTATTGCTGGTTGCTGGTCTCTATAGCGTGTTGTGGGGAAAGAAAAAGGAGGACCAGAAAAGTAAAAAAAATGAGCAAAAACAAGAAAACAAGGAGGAAGTACTCATCGTATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000139 GO:0000166 GO:0001882 GO:0001883 GO:0002376 GO:0003674 GO:0005488 GO:0005525 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0005802 GO:0005834 GO:0005886 GO:0006464 GO:0006497 GO:0006807 GO:0006810 GO:0006950 GO:0006952 GO:0006955 GO:0007275 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009605 GO:0009607 GO:0009620 GO:0009791 GO:0009814 GO:0009817 GO:0009845 GO:0009898 GO:0009914 GO:0009926 GO:0009987 GO:0010541 GO:0010817 GO:0012505 GO:0016020 GO:0017076 GO:0018342 GO:0018345 GO:0019001 GO:0019538 GO:0019897 GO:0019898 GO:0022622 GO:0031090 GO:0031234 GO:0031984 GO:0032501 GO:0032502 GO:0032549 GO:0032550 GO:0032553 GO:0032555 GO:0032561 GO:0032588 GO:0032991 GO:0034645 GO:0035639 GO:0036094 GO:0036211 GO:0042157 GO:0042158 GO:0043167 GO:0043168 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043543 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044425 GO:0044431 GO:0044444 GO:0044446 GO:0044459 GO:0044464 GO:0045087 GO:0048364 GO:0048527 GO:0048528 GO:0048731 GO:0048856 GO:0050832 GO:0050896 GO:0051179 GO:0051234 GO:0051704 GO:0051707 GO:0060918 GO:0065007 GO:0065008 GO:0071704 GO:0071944 GO:0090351 GO:0090696 GO:0097159 GO:0097354 GO:0097367 GO:0098542 GO:0098552 GO:0098562 GO:0098588 GO:0098791 GO:0098796 GO:0098797 GO:0099402 GO:1901265 GO:1901363 GO:1901564 GO:1901566 GO:1901576 GO:1902494 GO:1905360
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
G-gamma

Protein Analysis

355

Amino Acids

39.69

Weight (kDa)

9.64

Isoelectric Point (pI)

32.98

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
EamA PF00892 17 - 149 2.3e-16 EamA-like transporter family
EamA PF00892 191 - 329 1.3e-13 EamA-like transporter family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0010807)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G63420 AT3G63420 AT3G63420
fragaria_vesca FvH4_2g22840
malus_domestica MD03G1256500.v1.1 MD11G1277200.v1.1
prunus_persica Prupe.8G233500_v2.0.a1
pyrus_communis pycom03g20330 pycom11g24520
rosa_chinensis RchiOBHm_Chr6g0289751
rosa_laevigata RLG00000012269
rosa_multiflora Rmu_sc0005640.1_g000016
rosa_roxburghii Rroxscaffold_7G00177590 Rroxscaffold_7G00178090
rosa_rugosa Rorug06G0206300
rosa_samantha Rh6AG318200 Rh6BG325500 Rh6CG331100 Rh6DG316800
rosa_wichuraiana Rw6G027430

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 933
AccI GTMKAC 1 cut(s) 783
AcoI YGGCCR 1 cut(s) 423
AcuI CTGAAG 1 cut(s) 723
AfaI GTAC 2 cut(s) 293, 1056
AfiI CCNNNNNNNGG 5 cut(s) 178, 267, 457, 558, 933
AgsI TTSAA 1 cut(s) 203
AloI GAACNNNNNNTCC 2 cut(s) 559, 591
AluBI AGCT 8 cut(s) 15, 35, 161, 207, 596, 693, 743, 776
AluI AGCT 8 cut(s) 15, 35, 161, 207, 596, 693, 743, 776
Alw26I GTCTC 1 cut(s) 977
AlwNI CAGNNNCTG 1 cut(s) 461
AoxI GGCC 5 cut(s) 93, 423, 485, 734, 831
ApeKI GCWGC 5 cut(s) 32, 110, 329, 332, 693
Asp700I GAANNNNTTC 1 cut(s) 736
AspS9I GGNCC 5 cut(s) 485, 632, 831, 848, 1006
AsuC2I CCSGG 1 cut(s) 805
AvaII GGWCC 3 cut(s) 632, 848, 1006
BalI TGGCCA 1 cut(s) 425
BbvI GCAGC 5 cut(s) 44, 122, 316, 344, 680
BccI CCATC 4 cut(s) 382, 546, 750, 935
BcnI CCSGG 1 cut(s) 805
BcoDI GTCTC 1 cut(s) 977
BfaI CTAG 2 cut(s) 524, 773
BfmI CTRYAG 3 cut(s) 330, 677, 976
BisI GCNGC 5 cut(s) 33, 111, 330, 333, 694
BlsI GCNGC 5 cut(s) 34, 112, 331, 334, 695
BmcAI AGTACT 1 cut(s) 1056
Bme1390I CCNGG 1 cut(s) 805
Bme18I GGWCC 3 cut(s) 632, 848, 1006
BmgT120I GGNCC 5 cut(s) 485, 632, 831, 848, 1006
BmiI GGNNCC 4 cut(s) 183, 486, 577, 633
BmrFI CCNGG 1 cut(s) 805
BmrI ACTGGG 1 cut(s) 943
BmuI ACTGGG 1 cut(s) 943
BpmI CTGGAG 1 cut(s) 538
BpuMI CCSGG 1 cut(s) 805
BsaI GGTCTC 1 cut(s) 977
BsaJI CCNNGG 2 cut(s) 177, 426
Bsc4I CCNNNNNNNGG 5 cut(s) 178, 267, 457, 558, 933
Bse1I ACTGG 4 cut(s) 512, 821, 851, 938
Bse3DI GCAATG 2 cut(s) 66, 870
BseDI CCNNGG 2 cut(s) 177, 426
BseGI GGATG 3 cut(s) 393, 538, 761
BseLI CCNNNNNNNGG 5 cut(s) 178, 267, 457, 558, 933
BseMI GCAATG 2 cut(s) 66, 870
BseMII CTCAG 4 cut(s) 27, 269, 606, 918
BseNI ACTGG 4 cut(s) 512, 821, 851, 938
BseXI GCAGC 5 cut(s) 44, 122, 316, 344, 680
BshFI GGCC 5 cut(s) 95, 425, 487, 736, 833
BsiSI CCGG 1 cut(s) 804
BslFI GGGAC 1 cut(s) 773
BslI CCNNNNNNNGG 5 cut(s) 178, 267, 457, 558, 933
BsmAI GTCTC 1 cut(s) 977
BsmFI GGGAC 1 cut(s) 773
BsnI GGCC 5 cut(s) 95, 425, 487, 736, 833
Bso31I GGTCTC 1 cut(s) 977
Bsp143I GATC 1 cut(s) 63
BspANI GGCC 5 cut(s) 95, 425, 487, 736, 833
BspCNI CTCAG 4 cut(s) 28, 270, 605, 917
BspHI TCATGA 1 cut(s) 501
BspLI GGNNCC 4 cut(s) 183, 486, 577, 633
BspMAI CTGCAG 2 cut(s) 334, 681
BspTNI GGTCTC 1 cut(s) 977
BsrDI GCAATG 2 cut(s) 66, 870
BsrI ACTGG 4 cut(s) 512, 821, 851, 938
BssECI CCNNGG 2 cut(s) 177, 426
BssMI GATC 1 cut(s) 63
BssT1I CCWWGG 2 cut(s) 177, 426
Bst4CI ACNGT 1 cut(s) 788
BstAPI GCANNNNNTGC 2 cut(s) 326, 353
BstC8I GCNNGC 2 cut(s) 88, 698
BstDEI CTNAG 5 cut(s) 36, 105, 278, 592, 904
BstF5I GGATG 3 cut(s) 393, 538, 761
BstKTI GATC 1 cut(s) 66
BstMAI GTCTC 1 cut(s) 977
BstMBI GATC 1 cut(s) 63
BstNSI RCATGY 1 cut(s) 700
BstSCI CCNGG 1 cut(s) 803
BstSFI CTRYAG 3 cut(s) 330, 677, 976
BstV1I GCAGC 5 cut(s) 44, 122, 316, 344, 680
BstXI CCANNNNNNTGG 1 cut(s) 433
BsuRI GGCC 5 cut(s) 95, 425, 487, 736, 833
BtsCI GGATG 3 cut(s) 393, 538, 761
BtsI GCAGTG 3 cut(s) 342, 600, 686
BtsIMutI CAGTG 4 cut(s) 275, 342, 600, 686
Cac8I GCNNGC 2 cut(s) 88, 698
CaiI CAGNNNCTG 1 cut(s) 461
CciI TCATGA 1 cut(s) 501
Cfr13I GGNCC 5 cut(s) 485, 632, 831, 848, 1006
Csp6I GTAC 2 cut(s) 292, 1055
CviAII CATG 4 cut(s) 91, 416, 502, 697
CviQI GTAC 2 cut(s) 292, 1055
DdeI CTNAG 5 cut(s) 36, 105, 278, 592, 904
DpnI GATC 1 cut(s) 65
DpnII GATC 1 cut(s) 63
DraI TTTAAA 1 cut(s) 285
EaeI YGGCCR 1 cut(s) 423
Eco130I CCWWGG 2 cut(s) 177, 426
Eco147I AGGCCT 1 cut(s) 736
Eco31I GGTCTC 1 cut(s) 977
Eco47I GGWCC 3 cut(s) 632, 848, 1006
Eco57I CTGAAG 1 cut(s) 723
EcoO109I RGGNCCY 1 cut(s) 485
EcoT14I CCWWGG 2 cut(s) 177, 426
ErhI CCWWGG 2 cut(s) 177, 426
FaeI CATG 4 cut(s) 94, 419, 505, 700
FalI AAGNNNNNCTT 4 cut(s) 207, 239, 236, 268
FaqI GGGAC 1 cut(s) 773
FatI CATG 4 cut(s) 90, 415, 501, 696
FblI GTMKAC 1 cut(s) 783
Fnu4HI GCNGC 5 cut(s) 33, 111, 330, 333, 694
FokI GGATG 3 cut(s) 400, 525, 768
Fsp4HI GCNGC 5 cut(s) 33, 111, 330, 333, 694
FspBI CTAG 2 cut(s) 524, 773
GluI GCNGC 5 cut(s) 33, 111, 330, 333, 694
GsuI CTGGAG 1 cut(s) 538
HaeIII GGCC 5 cut(s) 95, 425, 487, 736, 833
HapII CCGG 1 cut(s) 804
Hin1II CATG 4 cut(s) 94, 419, 505, 700
HindIII AAGCTT 1 cut(s) 159
HpaII CCGG 1 cut(s) 804
Hpy166II GTNNAC 1 cut(s) 784
Hpy188III TCNNGA 6 cut(s) 244, 502, 515, 524, 555, 712
Hpy8I GTNNAC 1 cut(s) 784
HpyAV CCTTC 4 cut(s) 178, 637, 726, 747
HpyCH4III ACNGT 1 cut(s) 788
HpyF3I CTNAG 5 cut(s) 36, 105, 278, 592, 904
Hsp92II CATG 4 cut(s) 94, 419, 505, 700
Kzo9I GATC 1 cut(s) 63
LmnI GCTCC 2 cut(s) 187, 877
Lsp1109I GCAGC 5 cut(s) 44, 122, 316, 344, 680
MaeI CTAG 2 cut(s) 524, 773
MaeIII GTNAC 2 cut(s) 442, 799
MalI GATC 1 cut(s) 65
MboI GATC 1 cut(s) 63
MboII GAAGA 6 cut(s) 16, 58, 187, 760, 761, 853
MfeI CAATTG 2 cut(s) 636, 717
MlsI TGGCCA 1 cut(s) 425
MluCI AATT 8 cut(s) 74, 348, 357, 621, 636, 717, 795, 885
MluNI TGGCCA 1 cut(s) 425
Mox20I TGGCCA 1 cut(s) 425
MroXI GAANNNNTTC 1 cut(s) 736
MscI TGGCCA 1 cut(s) 425
MseI TTAA 6 cut(s) 11, 284, 383, 476, 494, 570
MslI CAYNNNNRTG 2 cut(s) 414, 863
Msp20I TGGCCA 1 cut(s) 425
MspA1I CMGCKG 1 cut(s) 35
MspI CCGG 1 cut(s) 804
MspR9I CCNGG 1 cut(s) 805
MunI CAATTG 2 cut(s) 636, 717
NciI CCSGG 1 cut(s) 805
NdeII GATC 1 cut(s) 63
NlaIII CATG 4 cut(s) 94, 419, 505, 700
NlaIV GGNNCC 4 cut(s) 183, 486, 577, 633
NspI RCATGY 1 cut(s) 700
PaeI GCATGC 1 cut(s) 700
PagI TCATGA 1 cut(s) 501
PceI AGGCCT 1 cut(s) 736
PdmI GAANNNNTTC 1 cut(s) 736
PflMI CCANNNNNTGG 1 cut(s) 933
PkrI GCNGC 5 cut(s) 34, 112, 331, 334, 695
PspN4I GGNNCC 4 cut(s) 183, 486, 577, 633
PspPI GGNCC 5 cut(s) 485, 632, 831, 848, 1006
PstI CTGCAG 2 cut(s) 334, 681
PstNI CAGNNNCTG 1 cut(s) 461
PvuII CAGCTG 1 cut(s) 35
RsaI GTAC 2 cut(s) 293, 1056
RsaNI GTAC 2 cut(s) 292, 1055
RseI CAYNNNNRTG 2 cut(s) 414, 863
SaqAI TTAA 6 cut(s) 11, 284, 383, 476, 494, 570
SatI GCNGC 5 cut(s) 33, 111, 330, 333, 694
Sau3AI GATC 1 cut(s) 63
Sau96I GGNCC 5 cut(s) 485, 632, 831, 848, 1006
ScaI AGTACT 1 cut(s) 1056
ScrFI CCNGG 1 cut(s) 805
SfcI CTRYAG 3 cut(s) 330, 677, 976
SinI GGWCC 3 cut(s) 632, 848, 1006
SmiMI CAYNNNNRTG 2 cut(s) 414, 863
SphI GCATGC 1 cut(s) 700
Sse9I AATT 8 cut(s) 74, 348, 357, 621, 636, 717, 795, 885
SseBI AGGCCT 1 cut(s) 736
SspI AATATT 1 cut(s) 900
SspMI CTAG 2 cut(s) 524, 773
StuI AGGCCT 1 cut(s) 736
StyD4I CCNGG 1 cut(s) 803
StyI CCWWGG 2 cut(s) 177, 426
TaaI ACNGT 1 cut(s) 788
TasI AATT 8 cut(s) 74, 348, 357, 621, 636, 717, 795, 885
TatI WGTACW 2 cut(s) 291, 1054
Tru1I TTAA 6 cut(s) 11, 284, 383, 476, 494, 570
Tru9I TTAA 6 cut(s) 11, 284, 383, 476, 494, 570
TscAI CASTG 4 cut(s) 282, 349, 607, 686
TseI GCWGC 5 cut(s) 32, 110, 329, 332, 693
TspDTI ATGAA 6 cut(s) 17, 58, 143, 490, 518, 755
TspRI CASTG 4 cut(s) 282, 349, 607, 686
Van91I CCANNNNNTGG 1 cut(s) 933
VpaK11BI GGWCC 3 cut(s) 632, 848, 1006
XbaI TCTAGA 1 cut(s) 523
XceI RCATGY 1 cut(s) 700
XmiI GTMKAC 1 cut(s) 783
XmnI GAANNNNTTC 1 cut(s) 736
XspI CTAG 2 cut(s) 524, 773
ZrmI AGTACT 1 cut(s) 1056
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.