No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G47950 AT2G47950 AT3G62990 |
| fragaria_vesca | FvH4_2g24610 |
| prunus_persica | Prupe.1G143800_v2.0.a1 Prupe.8G251300_v2.0.a1 |
| pyrus_communis | pycom13g15110 pycom16g14850 |
| rosa_chinensis | RchiOBHm_Chr6g0292431 |
| rosa_laevigata | RLG00000012025 |
| rosa_multiflora | Rmu_sc0012226.1_g000006 Rmu_sc0021303.1_g000002 |
| rosa_roxburghii | Rroxscaffold_7G00175070 |
| rosa_rugosa | Rorug06G0226600 |
| rosa_samantha | Rh6AG339900 Rh6BG347100 Rh6CG354000 Rh6DG339900 |
| rosa_wichuraiana | Rw6G029580 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 324 |
| AclWI | GGATC | 1 cut(s) | 62 |
| AcuI | CTGAAG | 1 cut(s) | 108 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 320 |
| AgsI | TTSAA | 4 cut(s) | 29, 120, 357, 379 |
| AluBI | AGCT | 3 cut(s) | 111, 151, 331 |
| AluI | AGCT | 3 cut(s) | 111, 151, 331 |
| Alw26I | GTCTC | 1 cut(s) | 349 |
| AlwI | GGATC | 1 cut(s) | 62 |
| AseI | ATTAAT | 1 cut(s) | 317 |
| AsuHPI | GGTGA | 3 cut(s) | 50, 185, 296 |
| BaeGI | GKGCMC | 1 cut(s) | 327 |
| BanI | GGYRCC | 1 cut(s) | 324 |
| BbsI | GAAGAC | 1 cut(s) | 3 |
| BccI | CCATC | 1 cut(s) | 267 |
| BclI | TGATCA | 3 cut(s) | 52, 166, 184 |
| BcoDI | GTCTC | 1 cut(s) | 349 |
| BmiI | GGNNCC | 1 cut(s) | 326 |
| BmrI | ACTGGG | 1 cut(s) | 66 |
| BmsI | GCATC | 2 cut(s) | 85, 294 |
| BmuI | ACTGGG | 1 cut(s) | 66 |
| BpiI | GAAGAC | 1 cut(s) | 3 |
| BsaJI | CCNNGG | 1 cut(s) | 81 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 320 |
| Bse1I | ACTGG | 2 cut(s) | 33, 72 |
| Bse3DI | GCAATG | 1 cut(s) | 308 |
| BseDI | CCNNGG | 1 cut(s) | 81 |
| BseGI | GGATG | 2 cut(s) | 10, 309 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 320 |
| BseMI | GCAATG | 1 cut(s) | 308 |
| BseMII | CTCAG | 1 cut(s) | 36 |
| BseNI | ACTGG | 2 cut(s) | 33, 72 |
| BseSI | GKGCMC | 1 cut(s) | 327 |
| BshNI | GGYRCC | 1 cut(s) | 324 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 320 |
| BsmAI | GTCTC | 1 cut(s) | 349 |
| Bsp1286I | GDGCHC | 1 cut(s) | 327 |
| Bsp143I | GATC | 4 cut(s) | 52, 67, 166, 184 |
| Bsp19I | CCATGG | 1 cut(s) | 81 |
| BspCNI | CTCAG | 1 cut(s) | 37 |
| BspLI | GGNNCC | 1 cut(s) | 326 |
| BspPI | GGATC | 1 cut(s) | 62 |
| BspQI | GCTCTTC | 1 cut(s) | 386 |
| BspT107I | GGYRCC | 1 cut(s) | 324 |
| BsrDI | GCAATG | 1 cut(s) | 308 |
| BsrI | ACTGG | 2 cut(s) | 33, 72 |
| BssECI | CCNNGG | 1 cut(s) | 81 |
| BssMI | GATC | 4 cut(s) | 52, 67, 166, 184 |
| BssT1I | CCWWGG | 1 cut(s) | 81 |
| Bst4CI | ACNGT | 1 cut(s) | 343 |
| Bst6I | CTCTTC | 1 cut(s) | 386 |
| BstC8I | GCNNGC | 1 cut(s) | 398 |
| BstDEI | CTNAG | 1 cut(s) | 45 |
| BstDSI | CCRYGG | 1 cut(s) | 81 |
| BstF5I | GGATG | 2 cut(s) | 10, 309 |
| BstKTI | GATC | 4 cut(s) | 55, 70, 169, 187 |
| BstMAI | GTCTC | 1 cut(s) | 349 |
| BstMBI | GATC | 4 cut(s) | 52, 67, 166, 184 |
| BstSLI | GKGCMC | 1 cut(s) | 327 |
| BstV2I | GAAGAC | 1 cut(s) | 3 |
| BtgI | CCRYGG | 1 cut(s) | 81 |
| BtgZI | GCGATG | 1 cut(s) | 219 |
| BtsCI | GGATG | 2 cut(s) | 10, 309 |
| BtsIMutI | CAGTG | 1 cut(s) | 40 |
| Cac8I | GCNNGC | 1 cut(s) | 398 |
| CviAII | CATG | 4 cut(s) | 82, 105, 155, 200 |
| CviJI | RGCY | 8 cut(s) | 32, 50, 80, 86, 111, 151, 331, 400 |
| CviKI_1 | RGCY | 8 cut(s) | 32, 50, 80, 86, 111, 151, 331, 400 |
| DdeI | CTNAG | 1 cut(s) | 45 |
| DpnI | GATC | 4 cut(s) | 54, 69, 168, 186 |
| DpnII | GATC | 4 cut(s) | 52, 67, 166, 184 |
| Eam1104I | CTCTTC | 1 cut(s) | 386 |
| EarI | CTCTTC | 1 cut(s) | 386 |
| Eco130I | CCWWGG | 1 cut(s) | 81 |
| Eco57I | CTGAAG | 1 cut(s) | 108 |
| EcoT14I | CCWWGG | 1 cut(s) | 81 |
| ErhI | CCWWGG | 1 cut(s) | 81 |
| FaeI | CATG | 4 cut(s) | 85, 108, 158, 203 |
| FatI | CATG | 4 cut(s) | 81, 104, 154, 199 |
| FbaI | TGATCA | 3 cut(s) | 52, 166, 184 |
| FokI | GGATG | 2 cut(s) | 17, 316 |
| Hin1II | CATG | 4 cut(s) | 85, 108, 158, 203 |
| HinfI | GANTC | 4 cut(s) | 41, 116, 176, 353 |
| HphI | GGTGA | 3 cut(s) | 50, 185, 296 |
| Hpy166II | GTNNAC | 1 cut(s) | 287 |
| Hpy188I | TCNGA | 2 cut(s) | 46, 57 |
| Hpy8I | GTNNAC | 1 cut(s) | 287 |
| HpyCH4III | ACNGT | 1 cut(s) | 343 |
| HpyF3I | CTNAG | 1 cut(s) | 45 |
| Hsp92II | CATG | 4 cut(s) | 85, 108, 158, 203 |
| Ksp22I | TGATCA | 3 cut(s) | 52, 166, 184 |
| Kzo9I | GATC | 4 cut(s) | 52, 67, 166, 184 |
| LguI | GCTCTTC | 1 cut(s) | 386 |
| LpnPI | CCDG | 7 cut(s) | 46, 78, 85, 155, 341, 382, 391 |
| LweI | GCATC | 2 cut(s) | 85, 294 |
| MaeIII | GTNAC | 1 cut(s) | 38 |
| MalI | GATC | 4 cut(s) | 54, 69, 168, 186 |
| MboI | GATC | 4 cut(s) | 52, 67, 166, 184 |
| MboII | GAAGA | 9 cut(s) | 3, 101, 239, 242, 245, 251, 254, 257, 403 |
| MhlI | GDGCHC | 1 cut(s) | 327 |
| MluCI | AATT | 1 cut(s) | 58 |
| MlyI | GAGTC | 1 cut(s) | 35 |
| MnlI | CCTC | 4 cut(s) | 40, 211, 217, 376 |
| MseI | TTAA | 1 cut(s) | 317 |
| MslI | CAYNNNNRTG | 1 cut(s) | 204 |
| MspA1I | CMGCKG | 1 cut(s) | 331 |
| NcoI | CCATGG | 1 cut(s) | 81 |
| NdeII | GATC | 4 cut(s) | 52, 67, 166, 184 |
| NlaIII | CATG | 4 cut(s) | 85, 108, 158, 203 |
| NlaIV | GGNNCC | 1 cut(s) | 326 |
| NmuCI | GTSAC | 1 cut(s) | 38 |
| PciSI | GCTCTTC | 1 cut(s) | 386 |
| PfeI | GAWTC | 3 cut(s) | 116, 176, 353 |
| PleI | GAGTC | 1 cut(s) | 35 |
| PpsI | GAGTC | 1 cut(s) | 35 |
| PshBI | ATTAAT | 1 cut(s) | 317 |
| PspN4I | GGNNCC | 1 cut(s) | 326 |
| PvuII | CAGCTG | 1 cut(s) | 331 |
| RseI | CAYNNNNRTG | 1 cut(s) | 204 |
| SapI | GCTCTTC | 1 cut(s) | 386 |
| SaqAI | TTAA | 1 cut(s) | 317 |
| Sau3AI | GATC | 4 cut(s) | 52, 67, 166, 184 |
| SchI | GAGTC | 1 cut(s) | 35 |
| SduI | GDGCHC | 1 cut(s) | 327 |
| SetI | ASST | 4 cut(s) | 113, 153, 333, 387 |
| SfaNI | GCATC | 2 cut(s) | 85, 294 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 204 |
| Sse9I | AATT | 1 cut(s) | 58 |
| SspI | AATATT | 1 cut(s) | 298 |
| StyI | CCWWGG | 1 cut(s) | 81 |
| TaaI | ACNGT | 1 cut(s) | 343 |
| TasI | AATT | 1 cut(s) | 58 |
| TfiI | GAWTC | 3 cut(s) | 116, 176, 353 |
| Tru1I | TTAA | 1 cut(s) | 317 |
| Tru9I | TTAA | 1 cut(s) | 317 |
| TscAI | CASTG | 1 cut(s) | 40 |
| TseFI | GTSAC | 1 cut(s) | 38 |
| Tsp45I | GTSAC | 1 cut(s) | 38 |
| TspDTI | ATGAA | 2 cut(s) | 243, 252 |
| TspGWI | ACGGA | 1 cut(s) | 169 |
| TspRI | CASTG | 1 cut(s) | 40 |
| VspI | ATTAAT | 1 cut(s) | 317 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 79 |