Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp08

Orthogroup ID

OG0003006

Physical Location & Seq

Genomic Coordinates Forward (+)

21831921 .. 21837075

Gene Structure 5155 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.8G255700.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1530 bp

ATGGGATTCAGATTTCACAATCTCAATTCCCTACATAAAAGGCTTGCTTTGCACATACACAAGCACAAGCACAAGCACAAGCATCCTCCTCATCCTAATTGCACAGTAGCCCAAGAATTCCTCACTTCCCATTTCCAAGGCCCTTCTTTCGTTCTCTCGCAAAATCCCATTTACTCAATCCCCAGAAGATGGCATTTAGGTCATTCCCACCACCACCATGATGATGAGCACCAGAACCAGCACCGTGGCTCTGGCGAAGAGGGCGAGAAGATCTTCAGACTGGGATTGGCAGCTGATATTGGACTGGCTACTGGCAAAGCATTGACTGGTTACTTAACTGGAAGCACTGCCATCATTGCTGATGCAGCCCATTCAGTCTCCGACGTGGTTCTTAGCAGCATCGCTTTGTGGTCATTTACAGCTGCAAAGGCTCCCAGAGACAAAGAACACCCATATGGACATGGTAAATTTGAGACTCTTGGAGCACTTGGAATCTCTTGTATGCTGTTGGCAACTGCTGGTGGCATTGCTTGGCATGCTTTGGATCTTTTGCTGGGATTGTTTTCAGCGGATCCTGCTATAGTTAGTCAGTCATTGACTGATCATGTGCATAATCATCATCATCATCGTGGACATCACCATGGAGTTGACATGGAGCACCCTGCTCTAGCTTTGAGCATGACTGTTTTCTCGATATTTGTTAAAGAAGGACTTTATTGGATCACAAAACGGGCAGGAGAAAGGCAAGGTAGTGGACTGATGAAAGCAAATGCATGGCATCATCGTGCAGATGCCGTTTCGTCAGTAGTTGCTCTCATTGGAGTTGGAGGTTCAATCCTAGGAGTAAAATTTCTAGATCCACTTGCTGGACTACTTGTCTCAGGCATGATCCTAAAAGCGGGACTTGAAACTGGGCATCAGAGTGTCTTGGAACTGGTGGATGCGGCAATCCCAGCAAAGCATTTGGATCCTATTAAACAGACAATTGTACAAGTTGAGGGTGTGAAGGGATGTCATCGCTTGAGGGGAAGGAGGGCTGGTTCAACTCTATACCTTGATGTACATATTGAGGTTGATCCGTTCTGTAGTGTTAGTGCTGCACATGACATTGGAGAAAATGTTCGTTATCAGATTCACAAATCCCATCCTGAAGTCTCTGAGGTTTTCATACACATAGATCCTTCAATTCAACAAATTTGCCCCAGTGTAGATCAGCAAGAAATTCTCGAGGGAATTGCATGCCAGAAATTTTCTCCTGGTGAGGATAAGGACATTGAGGCGGCTGTTTCTCGAATCATCACATCTAAGTATGCAGAGAAAATGGTTGTTGAGCGCATAACGCATCATTTGTTGCGGGGCAAGATGTTACTCCAAATTGAGGTTTCCATGCCTGCGGACATCCTGATTCGAGATGCGGTGGAGGTGGCAAAAGAAGCTGAGGAAGAGATTTTGAAGGCGGCGACCAATCTAATTCATGTTAGCATTCAGCTACGTCTGGGAAGTCCAATTCCACAATTCAACCATGACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cation_efflux ZT_dimer

Protein Analysis

510

Amino Acids

55.86

Weight (kDa)

6.78

Isoelectric Point (pI)

41.6

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0003006)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G47830 AT2G47830
fragaria_vesca	FvH4_c6g00080 FvH4_c6g00080 FvH4_c6g00080 FvH4_c6g00080 FvH4_c6g00080 FvH4_c6g00080 FvH4_c6g00080 FvH4_c6g00080 FvH4_c6g00110 FvH4_c6g00110 FvH4_c6g00110 FvH4_c6g00110 FvH4_c6g00110 FvH4_c6g00110 FvH4_c6g00110
malus_domestica	MD03G1284200.v1.1
prunus_persica	Prupe.8G255700_v2.0.a1 Prupe.8G255700_v2.0.a1 Prupe.8G255700_v2.0.a1 Prupe.8G255700_v2.0.a1
pyrus_communis	pycom03g22500
rosa_chinensis	RchiOBHm_Chr6g0293181
rosa_laevigata	RLG00000011969
rosa_multiflora	Rmu_co8409675.1_g000001 Rmu_sc0014786.1_g000003 Rmu_sc0039259.1_g000001 Rmu_sc0042811.1_g000001 Rmu_sc0042818.1_g000001
rosa_roxburghii	Rroxscaffold_7G00174370
rosa_rugosa	Rorug06G0233200 Rorug06G0233300
rosa_samantha	Rh6AG345800 Rh6BG353600 Rh6CG360000 Rh6DG346400
rosa_wichuraiana	Rw6G030140

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	2 cut(s)	189, 866
AciI	CCGC	8 cut(s)	569, 899, 944, 1280, 1354, 1394, 1415, 1457
AcsI	RAATTY	6 cut(s)	116, 467, 848, 1194, 1221, 1247
AcuI	CTGAAG	2 cut(s)	259, 1170
AfaI	GTAC	2 cut(s)	990, 1062
AfiI	CCNNNNNNNGG	4 cut(s)	189, 866, 898, 1378
AgsI	TTSAA	7 cut(s)	834, 908, 1044, 1185, 1190, 1453, 1519
AhdI	GACNNNNNGTC	1 cut(s)	875
AjiI	CACGTC	1 cut(s)	385
AjnI	CCWGG	1 cut(s)	1255
AloI	GAACNNNNNNTCC	4 cut(s)	1024, 1056, 1104, 1136
AluBI	AGCT	5 cut(s)	293, 422, 671, 1436, 1489
AluI	AGCT	5 cut(s)	293, 422, 671, 1436, 1489
Alw21I	GWGCWC	3 cut(s)	231, 487, 660
Alw26I	GTCTC	5 cut(s)	382, 432, 467, 883, 1159
Ama87I	CYCGRG	1 cut(s)	1226
AoxI	GGCC	1 cut(s)	139
ApeKI	GCWGC	5 cut(s)	290, 365, 396, 422, 1097
ApoI	RAATTY	6 cut(s)	116, 467, 848, 1194, 1221, 1247
Asp700I	GAANNNNTTC	2 cut(s)	272, 1119
AspA2I	CCTAGG	1 cut(s)	838
AspLEI	GCGC	1 cut(s)	1335
AspS9I	GGNCC	1 cut(s)	140
AsuHPI	GGTGA	2 cut(s)	629, 1271
AvaI	CYCGRG	1 cut(s)	1226
AvrII	CCTAGG	1 cut(s)	838
BamHI	GGATCC	2 cut(s)	571, 967
Bbv12I	GWGCWC	3 cut(s)	231, 487, 660
BbvCI	CCTCAGC	1 cut(s)	1437
BbvI	GCAGC	5 cut(s)	302, 377, 408, 409, 1084
BccI	CCATC	3 cut(s)	183, 359, 1152
BceAI	ACGGC	1 cut(s)	779
BcgI	CGANNNNNNTGC	2 cut(s)	1217, 1251
BciT130I	CCWGG	1 cut(s)	1257
BclI	TGATCA	1 cut(s)	601
BcoDI	GTCTC	5 cut(s)	382, 432, 467, 883, 1159
BfaI	CTAG	3 cut(s)	668, 839, 854
BfmI	CTRYAG	2 cut(s)	579, 1084
BglII	AGATCT	1 cut(s)	270
BisI	GCNGC	8 cut(s)	291, 366, 397, 423, 945, 1098, 1281, 1458
BlnI	CCTAGG	1 cut(s)	838
BlsI	GCNGC	8 cut(s)	292, 367, 398, 424, 946, 1099, 1282, 1459
Bme1390I	CCNGG	1 cut(s)	1257
BmeRI	GACNNNNNGTC	1 cut(s)	875
BmeT110I	CYCGRG	1 cut(s)	1226
BmgBI	CACGTC	1 cut(s)	385
BmgT120I	GGNCC	1 cut(s)	140
BmiI	GGNNCC	3 cut(s)	432, 573, 969
BmrFI	CCNGG	1 cut(s)	1257
BmrI	ACTGGG	3 cut(s)	290, 921, 1197
BmsI	GCATC	9 cut(s)	91, 352, 408, 781, 787, 925, 931, 1351, 1402
BmuI	ACTGGG	3 cut(s)	290, 921, 1197
Bpu10I	CCTNAGC	1 cut(s)	1437
BpuEI	CTTGAG	1 cut(s)	1042
BsaJI	CCNNGG	4 cut(s)	136, 244, 640, 838
BsaXI	ACNNNNNCTCC	4 cut(s)	1024, 1054, 1104, 1134
Bsc4I	CCNNNNNNNGG	4 cut(s)	189, 866, 898, 1378
Bse1I	ACTGG	8 cut(s)	285, 309, 316, 331, 343, 916, 939, 1203
Bse3DI	GCAATG	2 cut(s)	354, 525
BseBI	CCWGG	1 cut(s)	1257
BseDI	CCNNGG	4 cut(s)	136, 244, 640, 838
BseGI	GGATG	6 cut(s)	82, 91, 946, 1016, 1144, 1398
BseLI	CCNNNNNNNGG	4 cut(s)	189, 866, 898, 1378
BseMI	GCAATG	2 cut(s)	354, 525
BseMII	CTCAG	3 cut(s)	894, 1149, 1428
BseNI	ACTGG	8 cut(s)	285, 309, 316, 331, 343, 916, 939, 1203
BseRI	GAGGAG	1 cut(s)	78
BseXI	GCAGC	5 cut(s)	302, 377, 408, 409, 1084
BseYI	CCCAGC	2 cut(s)	553, 952
BsgI	GTGCAG	2 cut(s)	807, 1083
BshFI	GGCC	1 cut(s)	141
BsiHKAI	GWGCWC	3 cut(s)	231, 487, 660
BsiHKCI	CYCGRG	1 cut(s)	1226
BslFI	GGGAC	1 cut(s)	915
BslI	CCNNNNNNNGG	4 cut(s)	189, 866, 898, 1378
BsmAI	GTCTC	5 cut(s)	382, 432, 467, 883, 1159
BsmFI	GGGAC	1 cut(s)	915
BsmI	GAATGC	1 cut(s)	1482
BsnI	GGCC	1 cut(s)	141
BsoBI	CYCGRG	1 cut(s)	1226
Bsp1286I	GDGCHC	3 cut(s)	231, 487, 660
Bsp1407I	TGTACA	2 cut(s)	988, 1060
Bsp19I	CCATGG	1 cut(s)	640
BspACI	CCGC	8 cut(s)	569, 899, 944, 1280, 1354, 1394, 1415, 1457
BspANI	GGCC	1 cut(s)	141
BspCNI	CTCAG	3 cut(s)	893, 1150, 1429
BspLI	GGNNCC	3 cut(s)	432, 573, 969
BsrDI	GCAATG	2 cut(s)	354, 525
BsrGI	TGTACA	2 cut(s)	988, 1060
BsrI	ACTGG	8 cut(s)	285, 309, 316, 331, 343, 916, 939, 1203
BssECI	CCNNGG	4 cut(s)	136, 244, 640, 838
BssT1I	CCWWGG	3 cut(s)	136, 640, 838
Bst2UI	CCWGG	1 cut(s)	1257
Bst4CI	ACNGT	3 cut(s)	106, 245, 685
Bst6I	CTCTTC	2 cut(s)	252, 1437
BstAUI	TGTACA	2 cut(s)	988, 1060
BstC8I	GCNNGC	4 cut(s)	45, 537, 1240, 1392
BstDEI	CTNAG	5 cut(s)	392, 880, 1158, 1305, 1437
BstDSI	CCRYGG	2 cut(s)	244, 640
BstF5I	GGATG	6 cut(s)	82, 91, 946, 1016, 1144, 1398
BstHHI	GCGC	1 cut(s)	1335
BstMAI	GTCTC	5 cut(s)	382, 432, 467, 883, 1159
BstNI	CCWGG	1 cut(s)	1257
BstNSI	RCATGY	2 cut(s)	539, 1242
BstSCI	CCNGG	1 cut(s)	1255
BstSFI	CTRYAG	2 cut(s)	579, 1084
BstV1I	GCAGC	5 cut(s)	302, 377, 408, 409, 1084
BstX2I	RGATCY	6 cut(s)	270, 544, 571, 856, 967, 1177
BstXI	CCANNNNNNTGG	1 cut(s)	245
BstYI	RGATCY	6 cut(s)	270, 544, 571, 856, 967, 1177
BsuRI	GGCC	1 cut(s)	141
BtgI	CCRYGG	2 cut(s)	244, 640
BtgZI	GCGATG	2 cut(s)	385, 1001
BtrI	CACGTC	1 cut(s)	385
BtsCI	GGATG	6 cut(s)	82, 91, 946, 1016, 1144, 1398
BtsI	GCAGTG	1 cut(s)	345
BtsIMutI	CAGTG	2 cut(s)	345, 1210
Cac8I	GCNNGC	4 cut(s)	45, 537, 1240, 1392
CfoI	GCGC	1 cut(s)	1335
Cfr13I	GGNCC	1 cut(s)	140
Csp6I	GTAC	2 cut(s)	989, 1061
CviQI	GTAC	2 cut(s)	989, 1061
DdeI	CTNAG	5 cut(s)	392, 880, 1158, 1305, 1437
DriI	GACNNNNNGTC	1 cut(s)	875
Eam1104I	CTCTTC	2 cut(s)	252, 1437
Eam1105I	GACNNNNNGTC	1 cut(s)	875
EarI	CTCTTC	2 cut(s)	252, 1437
Eco130I	CCWWGG	3 cut(s)	136, 640, 838
Eco57I	CTGAAG	2 cut(s)	259, 1170
Eco88I	CYCGRG	1 cut(s)	1226
EcoO109I	RGGNCCY	1 cut(s)	140
EcoRI	GAATTC	1 cut(s)	116
EcoRII	CCWGG	1 cut(s)	1255
EcoT14I	CCWWGG	3 cut(s)	136, 640, 838
EcoT22I	ATGCAT	1 cut(s)	775
ErhI	CCWWGG	3 cut(s)	136, 640, 838
FalI	AAGNNNNNCTT	6 cut(s)	31, 63, 696, 728, 888, 920
FaqI	GGGAC	1 cut(s)	915
FauI	CCCGC	2 cut(s)	892, 1347
FauNDI	CATATG	1 cut(s)	454
FbaI	TGATCA	1 cut(s)	601
Fnu4HI	GCNGC	8 cut(s)	291, 366, 397, 423, 945, 1098, 1281, 1458
FokI	GGATG	6 cut(s)	69, 78, 953, 1023, 1131, 1385
Fsp4HI	GCNGC	8 cut(s)	291, 366, 397, 423, 945, 1098, 1281, 1458
FspBI	CTAG	3 cut(s)	668, 839, 854
GlaI	GCGC	1 cut(s)	1334
GluI	GCNGC	8 cut(s)	291, 366, 397, 423, 945, 1098, 1281, 1458
GsaI	CCCAGC	2 cut(s)	557, 956
HaeIII	GGCC	1 cut(s)	141
HhaI	GCGC	1 cut(s)	1335
Hin6I	GCGC	1 cut(s)	1333
HinP1I	GCGC	1 cut(s)	1333
HincII	GTYRAC	1 cut(s)	649
HindII	GTYRAC	1 cut(s)	649
HinfI	GANTC	6 cut(s)	6, 475, 492, 1132, 1293, 1405
HphI	GGTGA	2 cut(s)	629, 1271
Hpy166II	GTNNAC	3 cut(s)	632, 649, 755
Hpy188I	TCNGA	6 cut(s)	11, 278, 382, 921, 1131, 1159
Hpy188III	TCNNGA	7 cut(s)	691, 854, 1148, 1226, 1290, 1402, 1409
Hpy8I	GTNNAC	3 cut(s)	632, 649, 755
Hpy99I	CGWCG	1 cut(s)	386
HpyAV	CCTTC	6 cut(s)	153, 701, 1000, 1023, 1191, 1447
HpyCH4III	ACNGT	3 cut(s)	106, 245, 685
HpyCH4IV	ACGT	2 cut(s)	384, 1492
HpyF3I	CTNAG	5 cut(s)	392, 880, 1158, 1305, 1437
HpySE526I	ACGT	2 cut(s)	384, 1492
HspAI	GCGC	1 cut(s)	1333
Ksp22I	TGATCA	1 cut(s)	601
LmnI	GCTCC	3 cut(s)	436, 482, 655
Lsp1109I	GCAGC	5 cut(s)	302, 377, 408, 409, 1084
LweI	GCATC	9 cut(s)	91, 352, 408, 781, 787, 925, 931, 1351, 1402
MaeI	CTAG	3 cut(s)	668, 839, 854
MaeII	ACGT	2 cut(s)	384, 1492
MaeIII	GTNAC	2 cut(s)	329, 1365
MboII	GAAGA	5 cut(s)	198, 265, 269, 280, 1454
MfeI	CAATTG	1 cut(s)	984
MflI	RGATCY	6 cut(s)	270, 544, 571, 856, 967, 1177
MhlI	GDGCHC	3 cut(s)	231, 487, 660
MlyI	GAGTC	1 cut(s)	469
MmeI	TCCRAC	2 cut(s)	405, 805
Mph1103I	ATGCAT	1 cut(s)	775
MroXI	GAANNNNTTC	2 cut(s)	272, 1119
MseI	TTAA	3 cut(s)	335, 702, 975
MslI	CAYNNNNRTG	8 cut(s)	216, 219, 222, 453, 627, 639, 783, 921
MspA1I	CMGCKG	3 cut(s)	293, 422, 569
MspR9I	CCNGG	1 cut(s)	1257
MunI	CAATTG	1 cut(s)	984
Mva1269I	GAATGC	1 cut(s)	1482
MvaI	CCWGG	1 cut(s)	1257
NcoI	CCATGG	1 cut(s)	640
NdeI	CATATG	1 cut(s)	454
NlaIV	GGNNCC	3 cut(s)	432, 573, 969
NsiI	ATGCAT	1 cut(s)	775
NspI	RCATGY	2 cut(s)	539, 1242
PaeI	GCATGC	2 cut(s)	539, 1242
PaeR7I	CTCGAG	1 cut(s)	1226
PctI	GAATGC	1 cut(s)	1482
PdmI	GAANNNNTTC	2 cut(s)	272, 1119
PfeI	GAWTC	5 cut(s)	6, 492, 1132, 1293, 1405
PflMI	CCANNNNNTGG	2 cut(s)	189, 866
PkrI	GCNGC	8 cut(s)	292, 367, 398, 424, 946, 1099, 1282, 1459
PleI	GAGTC	1 cut(s)	469
PpsI	GAGTC	1 cut(s)	469
Psp6I	CCWGG	1 cut(s)	1255
PspFI	CCCAGC	2 cut(s)	553, 952
PspGI	CCWGG	1 cut(s)	1255
PspN4I	GGNNCC	3 cut(s)	432, 573, 969
PspPI	GGNCC	1 cut(s)	140
PsuI	RGATCY	6 cut(s)	270, 544, 571, 856, 967, 1177
PvuII	CAGCTG	2 cut(s)	293, 422
RsaI	GTAC	2 cut(s)	990, 1062
RsaNI	GTAC	2 cut(s)	989, 1061
RseI	CAYNNNNRTG	8 cut(s)	216, 219, 222, 453, 627, 639, 783, 921
SaqAI	TTAA	3 cut(s)	335, 702, 975
SatI	GCNGC	8 cut(s)	291, 366, 397, 423, 945, 1098, 1281, 1458
Sau96I	GGNCC	1 cut(s)	140
SchI	GAGTC	1 cut(s)	469
ScrFI	CCNGG	1 cut(s)	1257
SduI	GDGCHC	3 cut(s)	231, 487, 660
SfaNI	GCATC	9 cut(s)	91, 352, 408, 781, 787, 925, 931, 1351, 1402
SfcI	CTRYAG	2 cut(s)	579, 1084
Sfr274I	CTCGAG	1 cut(s)	1226
SlaI	CTCGAG	1 cut(s)	1226
SmiMI	CAYNNNNRTG	8 cut(s)	216, 219, 222, 453, 627, 639, 783, 921
SmlI	CTYRAG	2 cut(s)	1021, 1226
SmoI	CTYRAG	2 cut(s)	1021, 1226
SphI	GCATGC	2 cut(s)	539, 1242
SsiI	CCGC	8 cut(s)	569, 899, 944, 1280, 1354, 1394, 1415, 1457
SspMI	CTAG	3 cut(s)	668, 839, 854
StyD4I	CCNGG	1 cut(s)	1255
StyI	CCWWGG	3 cut(s)	136, 640, 838
TaaI	ACNGT	3 cut(s)	106, 245, 685
TaiI	ACGT	2 cut(s)	387, 1495
TaqI	TCGA	4 cut(s)	692, 1227, 1291, 1408
TatI	WGTACW	2 cut(s)	988, 1060
TauI	GCSGC	3 cut(s)	947, 1283, 1460
TfiI	GAWTC	5 cut(s)	6, 492, 1132, 1293, 1405
Tru1I	TTAA	3 cut(s)	335, 702, 975
Tru9I	TTAA	3 cut(s)	335, 702, 975
TscAI	CASTG	2 cut(s)	352, 1210
TseI	GCWGC	5 cut(s)	290, 365, 396, 422, 1097
TspDTI	ATGAA	3 cut(s)	776, 1156, 1463
TspGWI	ACGGA	1 cut(s)	1068
TspRI	CASTG	2 cut(s)	352, 1210
Van91I	CCANNNNNTGG	2 cut(s)	189, 866
XapI	RAATTY	6 cut(s)	116, 467, 848, 1194, 1221, 1247
XbaI	TCTAGA	1 cut(s)	853
XceI	RCATGY	2 cut(s)	539, 1242
XhoI	CTCGAG	1 cut(s)	1226
XmaJI	CCTAGG	1 cut(s)	838
XmnI	GAANNNNTTC	2 cut(s)	272, 1119
XspI	CTAG	3 cut(s)	668, 839, 854
Zsp2I	ATGCAT	1 cut(s)	775

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.