Rmu_co8409675.1_g000001

Metal tolerance protein

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_co8409675.1
Physical Location & Seq
Reverse (-)
1 .. 1241
1241 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_co8409675.1_g000001.1.cds

Sequence Viewer

Length: 249 bp
atgaaagcaaatgcatggcatcatcgtgcagatgccatttcgtcagtagttgctctcatcggagttggaggttcaatcctaggagtgaagtttctagatcctcttgctggacttcttgtctcgggcatgatcctaaaggctggtatcgaaacagggtaccagagtgtcttggagttggtggatgctgcaattcccacaaaagagttggatcctattaaacaaacaattctacaagtcgaaggtatgaag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

83

Amino Acids

8.71

Weight (kDa)

6.03

Isoelectric Point (pI)

30.29

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 156
AccB1I GGYRCC 1 cut(s) 156
AclWI GGATC 4 cut(s) 92, 124, 203, 216
AfaI GTAC 1 cut(s) 158
AfiI CCNNNNNNNGG 1 cut(s) 107
AgsI TTSAA 1 cut(s) 75
AhdI GACNNNNNGTC 1 cut(s) 116
Alw26I GTCTC 1 cut(s) 124
AlwI GGATC 4 cut(s) 92, 124, 203, 216
Ama87I CYCGRG 1 cut(s) 121
ApeKI GCWGC 1 cut(s) 185
Asp718I GGTACC 1 cut(s) 156
AspA2I CCTAGG 1 cut(s) 79
AvaI CYCGRG 1 cut(s) 121
AvrII CCTAGG 1 cut(s) 79
BaeI ACNNNNGTAYC 2 cut(s) 148, 181
BamHI GGATCC 1 cut(s) 208
BanI GGYRCC 1 cut(s) 156
BbvI GCAGC 1 cut(s) 172
BcoDI GTCTC 1 cut(s) 124
BfaI CTAG 2 cut(s) 80, 95
BisI GCNGC 1 cut(s) 186
BlnI CCTAGG 1 cut(s) 79
BlsI GCNGC 1 cut(s) 187
BmeRI GACNNNNNGTC 1 cut(s) 116
BmeT110I CYCGRG 1 cut(s) 121
BmiI GGNNCC 2 cut(s) 158, 210
BmsI GCATC 3 cut(s) 22, 28, 172
BsaJI CCNNGG 1 cut(s) 79
Bsc4I CCNNNNNNNGG 1 cut(s) 107
BseDI CCNNGG 1 cut(s) 79
BseGI GGATG 1 cut(s) 187
BseLI CCNNNNNNNGG 1 cut(s) 107
BseXI GCAGC 1 cut(s) 172
BsgI GTGCAG 1 cut(s) 48
BshNI GGYRCC 1 cut(s) 156
BsiHKCI CYCGRG 1 cut(s) 121
BslI CCNNNNNNNGG 1 cut(s) 107
BsmAI GTCTC 1 cut(s) 124
BsoBI CYCGRG 1 cut(s) 121
Bsp143I GATC 3 cut(s) 97, 129, 208
BspLI GGNNCC 2 cut(s) 158, 210
BspPI GGATC 4 cut(s) 92, 124, 203, 216
BspT107I GGYRCC 1 cut(s) 156
BssECI CCNNGG 1 cut(s) 79
BssMI GATC 3 cut(s) 97, 129, 208
BssT1I CCWWGG 1 cut(s) 79
BstF5I GGATG 1 cut(s) 187
BstKTI GATC 3 cut(s) 100, 132, 211
BstMAI GTCTC 1 cut(s) 124
BstMBI GATC 3 cut(s) 97, 129, 208
BstV1I GCAGC 1 cut(s) 172
BstX2I RGATCY 2 cut(s) 97, 208
BstYI RGATCY 2 cut(s) 97, 208
BtsCI GGATG 1 cut(s) 187
Csp6I GTAC 1 cut(s) 157
CviAII CATG 2 cut(s) 15, 127
CviJI RGCY 1 cut(s) 140
CviKI_1 RGCY 1 cut(s) 140
CviQI GTAC 1 cut(s) 157
DpnI GATC 3 cut(s) 99, 131, 210
DpnII GATC 3 cut(s) 97, 129, 208
DriI GACNNNNNGTC 1 cut(s) 116
Eam1105I GACNNNNNGTC 1 cut(s) 116
Eco130I CCWWGG 1 cut(s) 79
Eco88I CYCGRG 1 cut(s) 121
EcoT14I CCWWGG 1 cut(s) 79
EcoT22I ATGCAT 1 cut(s) 16
ErhI CCWWGG 1 cut(s) 79
FaeI CATG 2 cut(s) 18, 130
FaiI YATR 3 cut(s) 16, 128, 245
FatI CATG 2 cut(s) 14, 126
Fnu4HI GCNGC 1 cut(s) 186
FokI GGATG 1 cut(s) 194
Fsp4HI GCNGC 1 cut(s) 186
FspBI CTAG 2 cut(s) 80, 95
GluI GCNGC 1 cut(s) 186
Hin1II CATG 2 cut(s) 18, 130
Hpy188I TCNGA 1 cut(s) 62
Hpy188III TCNNGA 1 cut(s) 95
HpyAV CCTTC 1 cut(s) 233
HpyCH4V TGCA 3 cut(s) 14, 29, 188
Hsp92II CATG 2 cut(s) 18, 130
KpnI GGTACC 1 cut(s) 160
Kzo9I GATC 3 cut(s) 97, 129, 208
LpnPI CCDG 4 cut(s) 93, 126, 138, 173
Lsp1109I GCAGC 1 cut(s) 172
LweI GCATC 3 cut(s) 22, 28, 172
MaeI CTAG 2 cut(s) 80, 95
MalI GATC 3 cut(s) 99, 131, 210
MboI GATC 3 cut(s) 97, 129, 208
MflI RGATCY 2 cut(s) 97, 208
MluCI AATT 2 cut(s) 189, 225
MmeI TCCRAC 2 cut(s) 46, 186
MnlI CCTC 2 cut(s) 62, 111
Mph1103I ATGCAT 1 cut(s) 16
MseI TTAA 1 cut(s) 216
MslI CAYNNNNRTG 1 cut(s) 24
NdeII GATC 3 cut(s) 97, 129, 208
NlaIII CATG 2 cut(s) 18, 130
NlaIV GGNNCC 2 cut(s) 158, 210
NsiI ATGCAT 1 cut(s) 16
PkrI GCNGC 1 cut(s) 187
PspN4I GGNNCC 2 cut(s) 158, 210
PsuI RGATCY 2 cut(s) 97, 208
RsaI GTAC 1 cut(s) 158
RsaNI GTAC 1 cut(s) 157
RseI CAYNNNNRTG 1 cut(s) 24
SaqAI TTAA 1 cut(s) 216
SatI GCNGC 1 cut(s) 186
Sau3AI GATC 3 cut(s) 97, 129, 208
SetI ASST 2 cut(s) 73, 244
SfaNI GCATC 3 cut(s) 22, 28, 172
SmiMI CAYNNNNRTG 1 cut(s) 24
Sse9I AATT 2 cut(s) 189, 225
SspMI CTAG 2 cut(s) 80, 95
StyI CCWWGG 1 cut(s) 79
TaqI TCGA 2 cut(s) 147, 237
TasI AATT 2 cut(s) 189, 225
Tru1I TTAA 1 cut(s) 216
Tru9I TTAA 1 cut(s) 216
TseI GCWGC 1 cut(s) 185
TspDTI ATGAA 1 cut(s) 17
XbaI TCTAGA 1 cut(s) 94
XcmI CCANNNNNNNNNTGG 1 cut(s) 202
XmaJI CCTAGG 1 cut(s) 79
XspI CTAG 2 cut(s) 80, 95
Zsp2I ATGCAT 1 cut(s) 16
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.