Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp08

Orthogroup ID

OG0009282

Physical Location & Seq

Genomic Coordinates Forward (+)

21978235 .. 21983406

Gene Structure 5172 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.8G259200.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2829 bp

ATGGAAGCAACAACTCCATCCGATTCTCCAACCATAAAACCCATAAACAAGGGCGTGGTGCACAGAATCTGCGCCGGCCAAGTGATTCTAGACCTCTCGGCCGCCGTGAAAGAATTGGTCGAGAACAGCCTCGACGCTGGCGCCACCAGCATCGAAATCGCGCTCAAAGACTACGGCAAAGAGTGGTTCCAAGTCATCGACAATGGCTGTGGCATTTCGCCGAACAACTTCAAGGTCCTTGCCCTCAGGCATCACACTTCCAAACTGGGCGGTTTCCCTGACCTCCAGTCTCTGACCACGTTCGGGTTCCGAGGCGAGGCCTTGAGTTCTCTGTGTGCGTTGGGGAATTTGTCAGTGGAAACCAGGACGAAGAACGAGCTCGTTGCCACGCACTTGACTTTTGACCATTCGGGTTTATTGGTCGCCGAAAAGAAGACGGCCCGGCAAGTCGGGACTACCGTCACTGTGAAGAGCTTGTTTTCGAATTTACCAGTGCGGTGCAAGGAATTTGGTCGCAACATTCGGAAGGAGTACGGAAAGCTTGTTTCCTTACTGAATGCCTATGCCCTTATTGCGAAAGGAGTTCGTATCGTCTGCACCAATGCCACCGGTAAAAATGCAAAGTCTGTGTCTGGACAAGGTAGTGGGCGAAATATGGGAGATAGACAGTTCTTTTTTGTGAATGGTAGACCAGTGGATATGCCTAAAGTTACCAAGCTTGTGAATGAGTTATATAGAGGAGCAAACACCCAGCAGCATCCCATTGCAATAATGAATTTTACTGTTCCAACAAGAGCCTGTGATGTCAATGTAACTCCTGATAAAAGGAAAGTGTTCTTTTCTGATGAAAGCTCCATACTGATTGCCCTAAGGGAGGGTCTGCAGCAGATATATTCTCCAAATAATGCTCGTTTCTCTGTTAATAAAGTTGAGGAGCCTGCTAAGGAACCAGGTAGGTCTGAGCTGTGTTCTCCTCGTCAAAAGTCTCATAAGTTTCTGAAACAATCATCTACAGATGACAGTGTTCCTGAAGAAGCGGGCATCCCCACCCCGGAGGGTTTGCAGCAGAGATACTCTCCAAGTAATGCACATTATTCTGTTAATGAAGTCGAGGAGGAGACCACTATGGAAGCAGGTAGGTCTGAGTTCTGTTTCCGTCATCAAATGTCTCGTATGCTTCCAAGACAGGTATCTTCAGATGACAGTGTTCCTGAAGAAGTTCATGTTGAGGATCAGATTGCAGAGGGCAATGCTCCTCTGAAGGCTCTTGAAACTGACTCTGAGTGCACTCATGATGCAGAAGGGTCGAGCCACGGAAATTCAATGGGAAAAGACTTCGCTTTAAAGGTCCACAGCATTAAGAAGGTCGATGGTAGTGCGCAATTGATAAGACATATCAATAGGATGGCAACTGATCGAACCCATTCTCTTTCAACCATCGTTGAGAATGGAATTGCTGCGAATGGAAATTCATGTAGTCGTTCAAACTGTGTTCAATCGTCGCTTAACCAATTTGTAACTGTAAATAAAAGAAAGCATGAAAATATTAGTACAATGCTATCTGAAATGCCTGTCCTAAGGAACCAAGCTCTTCAAACTCAATCCAAGAATAGCACCTTTGATTTGCTTGTCGCTGTTTCAAAATCTCCAGTTAAACATCACCAGGCTGATGATTCTGCTGAGGTTGATAATTGTGCTGAAGTTGATGGGAATGTGCCATCCAAGTATCTGAGAGCAGACAAGATCCTCAATAAAATCAGATGTCCAGTTTCTTCTGGAGGCAACTCTAAAGATGAAGAACTTGAAGAGGATTTACAGGCTCAACAGAAAGCAGACCCGCTTTCTAATATGGCATCAACTGCTTCACCTAGCAGGGATCTTAAAAGTTTGTCTGAAGATCTTCCTGTTGCAGCTCCATCACCTTCTTCTTCTATACTGTCAGACACTCCAAAGCCAAAGCCTTCTTCTGGTCTTATGATGCATTCCACGTTGCAATTTAGTTTTCAAGAGCTAAAGACAAGGAGGCAGCAGAGATTGTCTAGATTGCAATCAAGCATGCCTGGAGGAGTAAAAGCACAAAGGTGCTATGCTGCTGCAACATTGGAGCTTTCTCAACCAGAAAACGAGGAGCGCAAAGCAAGGGCTTTAGCTGCAGCCACTACTGAGTTGGAAAGACTTTTTAGAAAGCAAGATTTTGGTAGAATGAAGGTGATTGGGCAGTTCAATCTTGGCTTCATCATTGGAAAGTTAGATCAAGATTTATTTATTGTGGATCAGCATGCAGCTGATGAGAAGTACAATTTTGAGCGTCTGTCACAATCTACCATCTTAAACCAACAGCCTTTGCTTCGGCCATTGAGGTTGGACTTATCTCCTCAAGAAGAAGTGGTAGCTTCCATGCACATAGACATAATCAGGAAAAATGGATTTTCTTTGGAAGAGGATCCACATGCTCCACCTGGGCAGCATTTCAAATTGAAAGCTGTCCCCTTCAGTAAAAACATAACTTTCGGAGTTGAAGATGTTAAGGACCTCATTTCCACTCTTGCTGATAGTCATGGGGAATGCTCAATCATTGGTAGTTATAAGATGGACACTGTTGATTCTGTTTGCCCATCTAGAGTTCGCGCAATGCTGGCATCACGCGCTTGCAGATCATCCGTTATGATTGGAGATGCCCTTGGAAGAAATGAGATGCAGAGGATTCTGGAGCACTTGGCAGGTCTGAAGTCTCCGTGGAATTGCCCGCATGGCAGACCAACTATGCGCCATTTGGTTGACTTGAAAACCATAAGAAGGTCGGAAGAAGACGATGATGCAGACTCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0002200 GO:0002376 GO:0002377 GO:0002440 GO:0002520 GO:0002566 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0003690 GO:0003697 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0005829 GO:0005856 GO:0005886 GO:0006139 GO:0006259 GO:0006281 GO:0006298 GO:0006310 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0007275 GO:0008150 GO:0008152 GO:0009555 GO:0009791 GO:0009987 GO:0010154 GO:0015630 GO:0016020 GO:0016445 GO:0016446 GO:0016462 GO:0016787 GO:0016788 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0022414 GO:0030983 GO:0031974 GO:0031981 GO:0032135 GO:0032138 GO:0032300 GO:0032389 GO:0032501 GO:0032502 GO:0032991 GO:0033554 GO:0034641 GO:0035770 GO:0036464 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044260 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0046483 GO:0048229 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0050896 GO:0051716 GO:0061458 GO:0070013 GO:0071704 GO:0071944 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363 GO:1990391 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03430 ko03460 map03430 map03460

Pfam Domains

Protein Families

DNA_mis_repair HATPase_c_3 MutL_C

Protein Analysis

943

Amino Acids

103.74

Weight (kDa)

7.34

Isoelectric Point (pI)

53.19

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009282)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G02460 AT4G02460 AT4G02460 AT4G02460
fragaria_vesca	FvH4_2g25510 FvH4_2g25510 FvH4_2g25510 FvH4_2g25510 FvH4_2g25510
malus_domestica	MD11G1305800.v1.1
prunus_persica	Prupe.8G259200_v2.0.a1 Prupe.8G259200_v2.0.a1
pyrus_communis	pycom11g26760
rosa_chinensis	RchiOBHm_Chr6g0293721
rosa_laevigata	RLG00000011929
rosa_roxburghii	Rroxscaffold_7G00173950
rosa_rugosa	Rorug06G0237600
rosa_samantha	Rh6AG350400 Rh6BG357900 Rh6CG364700 Rh6DG351600
rosa_wichuraiana	Rw6G030510

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2586
Acc16I	TGCGCA	1 cut(s)	1380
Acc36I	ACCTGC	2 cut(s)	1124, 2711
AccB1I	GGYRCC	1 cut(s)	140
AccI	GTMKAC	1 cut(s)	688
AccII	CGCG	3 cut(s)	161, 2628, 2646
AciI	CCGC	6 cut(s)	102, 270, 496, 1037, 1838, 2747
AclWI	GGATC	6 cut(s)	1239, 1738, 1884, 2280, 2438, 2451
AcoI	YGGCCR	3 cut(s)	76, 99, 2351
AcsI	RAATTY	6 cut(s)	346, 484, 506, 775, 1318, 1468
AcuI	CTGAAG	8 cut(s)	1050, 1179, 1233, 1280, 1719, 1914, 2476, 2747
AcyI	GRCGYC	1 cut(s)	141
AfaI	GTAC	3 cut(s)	533, 1552, 2297
AfiI	CCNNNNNNNGG	6 cut(s)	303, 316, 874, 1051, 1967, 2796
AgeI	ACCGGT	1 cut(s)	608
AhdI	GACNNNNNGTC	1 cut(s)	286
AjnI	CCWGG	5 cut(s)	362, 949, 1662, 2059, 2458
AjuI	GAANNNNNNNTTGG	2 cut(s)	1948, 1980
AleI	CACNNNNGTG	1 cut(s)	2080
Alw21I	GWGCWC	4 cut(s)	63, 381, 1289, 2715
Alw26I	GTCTC	5 cut(s)	294, 990, 1112, 1173, 2736
Alw44I	GTGCAC	2 cut(s)	59, 1285
AlwI	GGATC	6 cut(s)	1239, 1738, 1884, 2280, 2438, 2451
AlwNI	CAGNNNCTG	2 cut(s)	69, 292
AoxI	GGCC	5 cut(s)	76, 99, 318, 438, 2351
ApaLI	GTGCAC	2 cut(s)	59, 1285
ApoI	RAATTY	6 cut(s)	346, 484, 506, 775, 1318, 1468
ArsI	GACNNNNNNTTYG	2 cut(s)	614, 646
AsiGI	ACCGGT	1 cut(s)	608
Asp700I	GAANNNNTTC	5 cut(s)	227, 833, 1218, 1423, 1899
AspLEI	GCGC	8 cut(s)	74, 143, 163, 1381, 2133, 2630, 2648, 2769
AspS9I	GGNCC	4 cut(s)	235, 439, 1348, 2530
AsuC2I	CCSGG	2 cut(s)	442, 1052
AsuHPI	GGTGA	4 cut(s)	1652, 1857, 1911, 2221
AsuII	TTCGAA	1 cut(s)	482
AvaII	GGWCC	3 cut(s)	235, 1348, 2530
AxyI	CCTNAGG	3 cut(s)	245, 869, 1577
BaeGI	GKGCMC	2 cut(s)	63, 1289
BamHI	GGATCC	1 cut(s)	2443
BanI	GGYRCC	1 cut(s)	140
BanII	GRGCYC	1 cut(s)	381
BarI	GAAGNNNNNNTAC	2 cut(s)	1797, 1829
BbsI	GAAGAC	2 cut(s)	440, 2814
Bbv12I	GWGCWC	4 cut(s)	63, 381, 1289, 2715
BbvCI	CCTCAGC	1 cut(s)	1680
BceAI	ACGGC	3 cut(s)	89, 190, 453
BcgI	CGANNNNNNTGC	8 cut(s)	139, 173, 365, 399, 1287, 1321, 1358, 1392
BciT130I	CCWGG	5 cut(s)	364, 951, 1664, 2061, 2460
BcnI	CCSGG	2 cut(s)	442, 1052
BcoDI	GTCTC	5 cut(s)	294, 990, 1112, 1173, 2736
BfaI	CTAG	4 cut(s)	89, 1869, 2040, 2619
BfmI	CTRYAG	3 cut(s)	881, 1011, 2151
BfoI	RGCGCY	1 cut(s)	144
BfuAI	ACCTGC	2 cut(s)	1124, 2711
BglI	GCCNNNNNGGC	1 cut(s)	2751
BglII	AGATCT	1 cut(s)	1897
Bme1390I	CCNGG	7 cut(s)	364, 442, 951, 1052, 1664, 2061, 2460
Bme18I	GGWCC	3 cut(s)	235, 1348, 2530
BmeRI	GACNNNNNGTC	1 cut(s)	286
BmgT120I	GGNCC	4 cut(s)	235, 439, 1348, 2530
BmiI	GGNNCC	7 cut(s)	142, 188, 308, 936, 948, 1583, 2445
BmrFI	CCNGG	7 cut(s)	364, 442, 951, 1052, 1664, 2061, 2460
BmrI	ACTGGG	1 cut(s)	275
BmuI	ACTGGG	1 cut(s)	275
BoxI	GACNNNNGTC	1 cut(s)	458
BpiI	GAAGAC	2 cut(s)	440, 2814
BplI	GAGNNNNNCTC	2 cut(s)	1060, 1092
BpmI	CTGGAG	5 cut(s)	269, 1632, 1797, 2082, 2729
Bpu10I	CCTNAGC	2 cut(s)	942, 1680
Bpu14I	TTCGAA	1 cut(s)	482
BpuEI	CTTGAG	2 cut(s)	343, 2361
BpuMI	CCSGG	2 cut(s)	442, 1052
BsaBI	GATNNNNATC	1 cut(s)	2047
BsaHI	GRCGYC	1 cut(s)	141
BsaI	GGTCTC	1 cut(s)	1112
BsaJI	CCNNGG	6 cut(s)	310, 1050, 1312, 2459, 2680, 2735
BsaWI	WCCGGW	1 cut(s)	608
Bsc4I	CCNNNNNNNGG	6 cut(s)	303, 316, 874, 1051, 1967, 2796
Bse118I	RCCGGY	2 cut(s)	74, 608
Bse1I	ACTGG	6 cut(s)	270, 286, 491, 692, 1649, 1766
Bse21I	CCTNAGG	3 cut(s)	245, 869, 1577
Bse3DI	GCAATG	3 cut(s)	762, 1255, 2637
Bse8I	GATNNNNATC	1 cut(s)	2047
BseBI	CCWGG	5 cut(s)	364, 951, 1664, 2061, 2460
BseDI	CCNNGG	6 cut(s)	310, 1050, 1312, 2459, 2680, 2735
BseGI	GGATG	6 cut(s)	17, 757, 1041, 1410, 1718, 2657
BseJI	GATNNNNATC	1 cut(s)	2047
BseLI	CCNNNNNNNGG	6 cut(s)	303, 316, 874, 1051, 1967, 2796
BseMI	GCAATG	3 cut(s)	762, 1255, 2637
BseMII	CTCAG	7 cut(s)	259, 951, 1134, 1272, 1671, 1721, 2154
BseNI	ACTGG	6 cut(s)	270, 286, 491, 692, 1649, 1766
BseRI	GAGGAG	9 cut(s)	753, 947, 963, 1127, 1130, 1245, 2079, 2141, 2364
BseSI	GKGCMC	2 cut(s)	63, 1289
BseX3I	CGGCCG	1 cut(s)	99
BseYI	CCCAGC	1 cut(s)	750
BsgI	GTGCAG	1 cut(s)	580
Bsh1236I	CGCG	3 cut(s)	161, 2628, 2646
Bsh1285I	CGRYCG	1 cut(s)	102
BshFI	GGCC	5 cut(s)	78, 101, 320, 440, 2353
BshNI	GGYRCC	1 cut(s)	140
BshTI	ACCGGT	1 cut(s)	608
BsiEI	CGRYCG	1 cut(s)	102
BsiHKAI	GWGCWC	4 cut(s)	63, 381, 1289, 2715
BsiSI	CCGG	4 cut(s)	75, 442, 609, 1052
BslFI	GGGAC	2 cut(s)	466, 2471
BslI	CCNNNNNNNGG	6 cut(s)	303, 316, 874, 1051, 1967, 2796
BsmAI	GTCTC	5 cut(s)	294, 990, 1112, 1173, 2736
BsmFI	GGGAC	2 cut(s)	466, 2471
BsmI	GAATGC	3 cut(s)	562, 1981, 2570
BsnI	GGCC	5 cut(s)	78, 101, 320, 440, 2353
Bso31I	GGTCTC	1 cut(s)	1112
Bsp119I	TTCGAA	1 cut(s)	482
Bsp1286I	GDGCHC	4 cut(s)	63, 381, 1289, 2715
Bsp143I	GATC	9 cut(s)	1231, 1414, 1743, 1876, 1897, 2251, 2272, 2443, 2654
BspACI	CCGC	6 cut(s)	102, 270, 496, 1037, 1838, 2747
BspANI	GGCC	5 cut(s)	78, 101, 320, 440, 2353
BspCNI	CTCAG	7 cut(s)	258, 952, 1135, 1273, 1672, 1722, 2155
BspFNI	CGCG	3 cut(s)	161, 2628, 2646
BspHI	TCATGA	1 cut(s)	1291
BspLI	GGNNCC	7 cut(s)	142, 188, 308, 936, 948, 1583, 2445
BspMAI	CTGCAG	2 cut(s)	885, 2155
BspMI	ACCTGC	2 cut(s)	1124, 2711
BspPI	GGATC	6 cut(s)	1239, 1738, 1884, 2280, 2438, 2451
BspQI	GCTCTTC	2 cut(s)	464, 1596
BspT104I	TTCGAA	1 cut(s)	482
BspT107I	GGYRCC	1 cut(s)	140
BspTNI	GGTCTC	1 cut(s)	1112
BsrDI	GCAATG	3 cut(s)	762, 1255, 2637
BsrFI	RCCGGY	2 cut(s)	74, 608
BsrI	ACTGG	6 cut(s)	270, 286, 491, 692, 1649, 1766
BssAI	RCCGGY	2 cut(s)	74, 608
BssECI	CCNNGG	6 cut(s)	310, 1050, 1312, 2459, 2680, 2735
BssMI	GATC	9 cut(s)	1231, 1414, 1743, 1876, 1897, 2251, 2272, 2443, 2654
BssNI	GRCGYC	1 cut(s)	141
BssT1I	CCWWGG	1 cut(s)	2680
Bst2UI	CCWGG	5 cut(s)	364, 951, 1664, 2061, 2460
Bst6I	CTCTTC	4 cut(s)	464, 1596, 1800, 2433
BstACI	GRCGYC	1 cut(s)	141
BstAPI	GCANNNNNTGC	1 cut(s)	1859
BstBI	TTCGAA	1 cut(s)	482
BstC8I	GCNNGC	9 cut(s)	76, 139, 939, 1039, 2057, 2280, 2637, 2650, 2747
BstDSI	CCRYGG	2 cut(s)	1312, 2735
BstENI	CCTNNNNNAGG	1 cut(s)	872
BstF5I	GGATG	6 cut(s)	17, 757, 1041, 1410, 1718, 2657
BstFNI	CGCG	3 cut(s)	161, 2628, 2646
BstH2I	RGCGCY	1 cut(s)	144
BstHHI	GCGC	8 cut(s)	74, 143, 163, 1381, 2133, 2630, 2648, 2769
BstKTI	GATC	9 cut(s)	1234, 1417, 1746, 1879, 1900, 2254, 2275, 2446, 2657
BstMAI	GTCTC	5 cut(s)	294, 990, 1112, 1173, 2736
BstMBI	GATC	9 cut(s)	1231, 1414, 1743, 1876, 1897, 2251, 2272, 2443, 2654
BstMCI	CGRYCG	1 cut(s)	102
BstMWI	GCNNNNNNNGC	7 cut(s)	147, 572, 1859, 2150, 2636, 2645, 2751
BstNI	CCWGG	5 cut(s)	364, 951, 1664, 2061, 2460
BstNSI	RCATGY	3 cut(s)	2059, 2282, 2453
BstPAI	GACNNNNGTC	1 cut(s)	458
BstSCI	CCNGG	7 cut(s)	362, 440, 949, 1050, 1662, 2059, 2458
BstSFI	CTRYAG	3 cut(s)	881, 1011, 2151
BstSLI	GKGCMC	2 cut(s)	63, 1289
BstUI	CGCG	3 cut(s)	161, 2628, 2646
BstV2I	GAAGAC	2 cut(s)	440, 2814
BstX2I	RGATCY	4 cut(s)	1743, 1876, 1897, 2443
BstYI	RGATCY	4 cut(s)	1743, 1876, 1897, 2443
BstZI	CGGCCG	1 cut(s)	99
Bsu36I	CCTNAGG	3 cut(s)	245, 869, 1577
BsuRI	GGCC	5 cut(s)	78, 101, 320, 440, 2353
BtgI	CCRYGG	2 cut(s)	1312, 2735
BtsCI	GGATG	6 cut(s)	17, 757, 1041, 1410, 1718, 2657
BtsIMutI	CAGTG	7 cut(s)	360, 462, 498, 699, 1027, 1210, 2595
BveI	ACCTGC	2 cut(s)	1124, 2711
Cac8I	GCNNGC	9 cut(s)	76, 139, 939, 1039, 2057, 2280, 2637, 2650, 2747
CaiI	CAGNNNCTG	2 cut(s)	69, 292
CciI	TCATGA	1 cut(s)	1291
CfoI	GCGC	8 cut(s)	74, 143, 163, 1381, 2133, 2630, 2648, 2769
Cfr10I	RCCGGY	2 cut(s)	74, 608
Cfr13I	GGNCC	4 cut(s)	235, 439, 1348, 2530
CseI	GACGC	2 cut(s)	143, 2297
CsiI	ACCWGGT	1 cut(s)	949
Csp6I	GTAC	3 cut(s)	532, 1551, 2296
CspAI	ACCGGT	1 cut(s)	608
CspCI	CAANNNNNGTGG	2 cut(s)	190, 225
CviQI	GTAC	3 cut(s)	532, 1551, 2296
DinI	GGCGCC	1 cut(s)	142
DpnI	GATC	9 cut(s)	1233, 1416, 1745, 1878, 1899, 2253, 2274, 2445, 2656
DpnII	GATC	9 cut(s)	1231, 1414, 1743, 1876, 1897, 2251, 2272, 2443, 2654
DraI	TTTAAA	1 cut(s)	1344
DriI	GACNNNNNGTC	1 cut(s)	286
EaeI	YGGCCR	3 cut(s)	76, 99, 2351
EagI	CGGCCG	1 cut(s)	99
Eam1104I	CTCTTC	4 cut(s)	464, 1596, 1800, 2433
Eam1105I	GACNNNNNGTC	1 cut(s)	286
EarI	CTCTTC	4 cut(s)	464, 1596, 1800, 2433
Ecl136II	GAGCTC	1 cut(s)	379
EclXI	CGGCCG	1 cut(s)	99
Eco130I	CCWWGG	1 cut(s)	2680
Eco147I	AGGCCT	1 cut(s)	320
Eco24I	GRGCYC	1 cut(s)	381
Eco31I	GGTCTC	1 cut(s)	1112
Eco47I	GGWCC	3 cut(s)	235, 1348, 2530
Eco52I	CGGCCG	1 cut(s)	99
Eco53kI	GAGCTC	1 cut(s)	379
Eco57I	CTGAAG	8 cut(s)	1050, 1179, 1233, 1280, 1719, 1914, 2476, 2747
Eco81I	CCTNAGG	3 cut(s)	245, 869, 1577
EcoICRI	GAGCTC	1 cut(s)	379
EcoNI	CCTNNNNNAGG	1 cut(s)	872
EcoO109I	RGGNCCY	2 cut(s)	235, 2530
EcoRII	CCWGG	5 cut(s)	362, 949, 1662, 2059, 2458
EcoT14I	CCWWGG	1 cut(s)	2680
EcoT22I	ATGCAT	1 cut(s)	1983
EcoT38I	GRGCYC	1 cut(s)	381
EgeI	GGCGCC	1 cut(s)	142
EheI	GGCGCC	1 cut(s)	142
ErhI	CCWWGG	1 cut(s)	2680
FaqI	GGGAC	2 cut(s)	466, 2471
FauI	CCCGC	3 cut(s)	1030, 1845, 2754
FblI	GTMKAC	1 cut(s)	688
FokI	GGATG	6 cut(s)	4, 744, 1028, 1417, 1705, 2644
FriOI	GRGCYC	1 cut(s)	381
FspBI	CTAG	4 cut(s)	89, 1869, 2040, 2619
FspI	TGCGCA	1 cut(s)	1380
GlaI	GCGC	8 cut(s)	73, 142, 162, 1380, 2132, 2629, 2647, 2768
GsaI	CCCAGC	1 cut(s)	754
GsuI	CTGGAG	5 cut(s)	269, 1632, 1797, 2082, 2729
HaeII	RGCGCY	1 cut(s)	144
HaeIII	GGCC	5 cut(s)	78, 101, 320, 440, 2353
HapII	CCGG	4 cut(s)	75, 442, 609, 1052
HgaI	GACGC	2 cut(s)	143, 2297
HhaI	GCGC	8 cut(s)	74, 143, 163, 1381, 2133, 2630, 2648, 2769
Hin1I	GRCGYC	1 cut(s)	141
Hin6I	GCGC	8 cut(s)	72, 141, 161, 1379, 2131, 2628, 2646, 2767
HinP1I	GCGC	8 cut(s)	72, 141, 161, 1379, 2131, 2628, 2646, 2767
HincII	GTYRAC	1 cut(s)	2779
HindII	GTYRAC	1 cut(s)	2779
HindIII	AAGCTT	2 cut(s)	539, 716
HinfI	GANTC	8 cut(s)	23, 66, 85, 1277, 1673, 2603, 2704, 2822
HpaII	CCGG	4 cut(s)	75, 442, 609, 1052
HphI	GGTGA	4 cut(s)	1652, 1857, 1911, 2221
Hpy166II	GTNNAC	5 cut(s)	61, 689, 1287, 1351, 2779
Hpy8I	GTNNAC	5 cut(s)	61, 689, 1287, 1351, 2779
Hpy99I	CGWCG	2 cut(s)	137, 1504
HpyAV	CCTTC	9 cut(s)	520, 1255, 1295, 1357, 1932, 1971, 2200, 2500, 2790
HpyCH4IV	ACGT	2 cut(s)	299, 1988
HpyF10VI	GCNNNNNNNGC	7 cut(s)	147, 572, 1859, 2150, 2636, 2645, 2751
HpySE526I	ACGT	2 cut(s)	299, 1988
Hsp92I	GRCGYC	1 cut(s)	141
HspAI	GCGC	8 cut(s)	72, 141, 161, 1379, 2131, 2628, 2646, 2767
KasI	GGCGCC	1 cut(s)	140
KroI	GCCGGC	1 cut(s)	74
KroNI	GCCGGC	1 cut(s)	76
Kzo9I	GATC	9 cut(s)	1231, 1414, 1743, 1876, 1897, 2251, 2272, 2443, 2654
LguI	GCTCTTC	2 cut(s)	464, 1596
LmnI	GCTCC	9 cut(s)	740, 857, 934, 1258, 1918, 2104, 2128, 2458, 2710
MabI	ACCWGGT	1 cut(s)	949
MaeI	CTAG	4 cut(s)	89, 1869, 2040, 2619
MaeII	ACGT	2 cut(s)	299, 1988
MaeIII	GTNAC	5 cut(s)	460, 709, 811, 1516, 2313
MalI	GATC	9 cut(s)	1233, 1416, 1745, 1878, 1899, 2253, 2274, 2445, 2656
MboI	GATC	9 cut(s)	1231, 1414, 1743, 1876, 1897, 2251, 2272, 2443, 2654
MfeI	CAATTG	1 cut(s)	1382
MflI	RGATCY	4 cut(s)	1743, 1876, 1897, 2443
MhlI	GDGCHC	4 cut(s)	63, 381, 1289, 2715
Mly113I	GGCGCC	1 cut(s)	141
MlyI	GAGTC	2 cut(s)	1271, 2816
MmeI	TCCRAC	5 cut(s)	53, 812, 2148, 2343, 2781
Mph1103I	ATGCAT	1 cut(s)	1983
MroNI	GCCGGC	1 cut(s)	74
MroXI	GAANNNNTTC	5 cut(s)	227, 833, 1218, 1423, 1899
MseI	TTAA	9 cut(s)	921, 1101, 1343, 1359, 1506, 1653, 1881, 2330, 2526
MslI	CAYNNNNRTG	1 cut(s)	2080
MspA1I	CMGCKG	1 cut(s)	2285
MspI	CCGG	4 cut(s)	75, 442, 609, 1052
MspR9I	CCNGG	7 cut(s)	364, 442, 951, 1052, 1664, 2061, 2460
MunI	CAATTG	1 cut(s)	1382
Mva1269I	GAATGC	3 cut(s)	562, 1981, 2570
MvaI	CCWGG	5 cut(s)	364, 951, 1664, 2061, 2460
MvnI	CGCG	3 cut(s)	161, 2628, 2646
MwoI	GCNNNNNNNGC	7 cut(s)	147, 572, 1859, 2150, 2636, 2645, 2751
NaeI	GCCGGC	1 cut(s)	76
NarI	GGCGCC	1 cut(s)	141
NciI	CCSGG	2 cut(s)	442, 1052
NdeII	GATC	9 cut(s)	1231, 1414, 1743, 1876, 1897, 2251, 2272, 2443, 2654
NgoMIV	GCCGGC	1 cut(s)	74
NlaIV	GGNNCC	7 cut(s)	142, 188, 308, 936, 948, 1583, 2445
NmeAIII	GCCGAG	1 cut(s)	77
NmuCI	GTSAC	2 cut(s)	460, 2313
NsbI	TGCGCA	1 cut(s)	1380
NsiI	ATGCAT	1 cut(s)	1983
NspI	RCATGY	3 cut(s)	2059, 2282, 2453
NspV	TTCGAA	1 cut(s)	482
OliI	CACNNNNGTG	1 cut(s)	2080
PaeI	GCATGC	2 cut(s)	2059, 2282
PagI	TCATGA	1 cut(s)	1291
PceI	AGGCCT	1 cut(s)	320
PciSI	GCTCTTC	2 cut(s)	464, 1596
PcsI	WCGNNNNNNNCGW	1 cut(s)	456
PctI	GAATGC	3 cut(s)	562, 1981, 2570
PdiI	GCCGGC	1 cut(s)	76
PdmI	GAANNNNTTC	5 cut(s)	227, 833, 1218, 1423, 1899
PfeI	GAWTC	6 cut(s)	23, 66, 85, 1673, 2603, 2704
PinAI	ACCGGT	1 cut(s)	608
PleI	GAGTC	2 cut(s)	1271, 2816
PluTI	GGCGCC	1 cut(s)	144
PpsI	GAGTC	2 cut(s)	1271, 2816
PpuMI	RGGWCCY	2 cut(s)	235, 2530
PshAI	GACNNNNGTC	1 cut(s)	458
PsiI	TTATAA	1 cut(s)	2586
Psp124BI	GAGCTC	1 cut(s)	381
Psp5II	RGGWCCY	2 cut(s)	235, 2530
Psp6I	CCWGG	5 cut(s)	362, 949, 1662, 2059, 2458
PspFI	CCCAGC	1 cut(s)	750
PspGI	CCWGG	5 cut(s)	362, 949, 1662, 2059, 2458
PspN4I	GGNNCC	7 cut(s)	142, 188, 308, 936, 948, 1583, 2445
PspPI	GGNCC	4 cut(s)	235, 439, 1348, 2530
PspPPI	RGGWCCY	2 cut(s)	235, 2530
PstI	CTGCAG	2 cut(s)	885, 2155
PstNI	CAGNNNCTG	2 cut(s)	69, 292
PsuI	RGATCY	4 cut(s)	1743, 1876, 1897, 2443
PvuII	CAGCTG	1 cut(s)	2285
RsaI	GTAC	3 cut(s)	533, 1552, 2297
RsaNI	GTAC	3 cut(s)	532, 1551, 2296
RseI	CAYNNNNRTG	1 cut(s)	2080
SacI	GAGCTC	1 cut(s)	381
SapI	GCTCTTC	2 cut(s)	464, 1596
SaqAI	TTAA	9 cut(s)	921, 1101, 1343, 1359, 1506, 1653, 1881, 2330, 2526
Sau3AI	GATC	9 cut(s)	1231, 1414, 1743, 1876, 1897, 2251, 2272, 2443, 2654
Sau96I	GGNCC	4 cut(s)	235, 439, 1348, 2530
SchI	GAGTC	2 cut(s)	1271, 2816
ScrFI	CCNGG	7 cut(s)	364, 442, 951, 1052, 1664, 2061, 2460
SduI	GDGCHC	4 cut(s)	63, 381, 1289, 2715
SexAI	ACCWGGT	1 cut(s)	949
SfcI	CTRYAG	3 cut(s)	881, 1011, 2151
SfoI	GGCGCC	1 cut(s)	142
SfuI	TTCGAA	1 cut(s)	482
SinI	GGWCC	3 cut(s)	235, 1348, 2530
SmiMI	CAYNNNNRTG	1 cut(s)	2080
SmlI	CTYRAG	2 cut(s)	322, 2376
SmoI	CTYRAG	2 cut(s)	322, 2376
SphI	GCATGC	2 cut(s)	2059, 2282
SseBI	AGGCCT	1 cut(s)	320
SsiI	CCGC	6 cut(s)	102, 270, 496, 1037, 1838, 2747
SspDI	GGCGCC	1 cut(s)	140
SspI	AATATT	1 cut(s)	1546
SspMI	CTAG	4 cut(s)	89, 1869, 2040, 2619
SstI	GAGCTC	1 cut(s)	381
StuI	AGGCCT	1 cut(s)	320
StyD4I	CCNGG	7 cut(s)	362, 440, 949, 1050, 1662, 2059, 2458
StyI	CCWWGG	1 cut(s)	2680
TaiI	ACGT	2 cut(s)	302, 1991
TaqI	TCGA	9 cut(s)	120, 132, 153, 198, 482, 1110, 1307, 1368, 1417
TatI	WGTACW	2 cut(s)	1550, 2295
TauI	GCSGC	1 cut(s)	104
TfiI	GAWTC	6 cut(s)	23, 66, 85, 1673, 2603, 2704
Tru1I	TTAA	9 cut(s)	921, 1101, 1343, 1359, 1506, 1653, 1881, 2330, 2526
Tru9I	TTAA	9 cut(s)	921, 1101, 1343, 1359, 1506, 1653, 1881, 2330, 2526
TscAI	CASTG	7 cut(s)	360, 469, 498, 699, 1027, 1210, 2602
TseFI	GTSAC	2 cut(s)	460, 2313
Tsp45I	GTSAC	2 cut(s)	460, 2313
TspDTI	ATGAA	9 cut(s)	788, 861, 1119, 1211, 1461, 1554, 1809, 2219, 2224
TspGWI	ACGGA	5 cut(s)	549, 1145, 1329, 2650, 2724
TspRI	CASTG	7 cut(s)	360, 469, 498, 699, 1027, 1210, 2602
VneI	GTGCAC	2 cut(s)	59, 1285
VpaK11BI	GGWCC	3 cut(s)	235, 1348, 2530
XagI	CCTNNNNNAGG	1 cut(s)	872
XapI	RAATTY	6 cut(s)	346, 484, 506, 775, 1318, 1468
XbaI	TCTAGA	3 cut(s)	88, 2039, 2618
XceI	RCATGY	3 cut(s)	2059, 2282, 2453
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2164
XmiI	GTMKAC	1 cut(s)	688
XmnI	GAANNNNTTC	5 cut(s)	227, 833, 1218, 1423, 1899
XspI	CTAG	4 cut(s)	89, 1869, 2040, 2619
Zsp2I	ATGCAT	1 cut(s)	1983

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.