Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000007

Orthogroup ID

OG0009282

Physical Location & Seq

Genomic Coordinates Reverse (-)

13795523 .. 13798310

Gene Structure 2788 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_7G00173950.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1812 bp

ATGGAGGCGACTACTCCTCCGTCCGATTCTCCATCTATAAAACCCATAAACAAGTCCGTGGTCCACAGAATCTGCGCCGGCCAAGTGATCCTCGACCTCTCGGCCGCCGTCAAAGAATTGGTCGAGAACAGCCTCGACGCCGGCGCCACCACCATCGAGATCGCGCTCAAAGACTACGGCAAAGAGTGTGTTGGTACGGCGCGGGAAAAGAAGACGGCGCGGCAGGTCGGCACCACCGTAACGGTCAAGAATCTGTTTGTGAATTTACCGGTGAGGTGCAAGGAGTTCAGTCGCAACATTCGGAAGGAGTATGGGAAGCTGGTTTCTCTATTGAATGCCTATGCTCTTATTGCGAAAGGGGTTCGGTTAGTCTGCACGAATGCCATAGGTAGAAATGCAAAGTCTGTGGTGCTTAAAACGCAAGGAAGTGGTTCACTTAAGGATAATATTGTGACATTGTTTGGGATGAGCACTTTCAGTTGTTTAGAGCCTGTGAGTATATCTGTATCTGATAGTTGCAAGGTTGATGGTTTCCTTTCCAAGTCGGGACAAGGTAGTGGTCGGAACATGGGAGATAGGCAGTTCTTTTTTGTGAATGGTCGACCTGTGGATATGCCTAAAATTACAAAGCTTGTGAATGAGTTGTATAGAGGGGCAAACTCCCAGCAGCATCCTATTGCCATATTGAATTTCACTGTTCCGACAAGAGCGTGTGATGTCAATGTTACTCCTGATAAAAGGAAAGTGTTCTTTTCTGATGAGAGCTCCATACTTGTTGCCTTAAGGGAGGGTCTGCAGCAGATATATTCCACTAGTAATGCTCGTTACTCTGTTAATAAAGTGGAGGAGCCTGCCAAAGAATCAGGCAGGTCTCAGTTGTGTTCACCTCATCAAGGGTCTCATAAACAATTAGCTTGGGATGATGATGATGATGATGTTCCTGAAGAAGTTCGTCCGGCTGATAAAGCTGAGGAGGCTACAAAAGAAGGAGGCAGACAATCCTCTATAGATTCTGTACCTAAAGAAGTTAGTCCTGAGGATCACACTCCAGAAGGCGATGCTCCTCTGAAAGCTGCAGAAATTGATTCTGAAACTAATCATGATGAAGAAGGTTTTAGCCATGAAAATTCAATGGGGAAGGATTTTGCTTTAAGAGTACACAGCATTAAGAAGGTCCATGGAACTAGTCAATTGACAAAGAATCTCAGTAGTATGAAAGCTGATCGAATTGCAGCAAATGGAGATTCATGTAGTCATTCAAGCTCTGTACAAGCATCAATTAACCAGTTTGTAACTGTAACTAAAAGAAAACATGATAGTATTAGCACAGTCCTGTCTGAAATGCCTGTCCTAAGGAACCAAAGTCTTCTTTGTCAATCCAAGAATGATGCACTTAATGCTCAGCAGATCAATGATTCTACTGAAGTTGATAATTCTGCTGAAGCTGGTGAGAATGAGCCATCCAAATATTTTAGAGTAGATAGGATCCTCAACAAAATTAGAGTTCCAGTTTCTCCTGGAGGCGAGATTGAGGGTGAAGGACATGGAGAGGGTTTACAGGCTCAACAGAAAGCAGTGCCTGTTGCTGATATGGCACCAACTGCTTCACCCGGTAGGGATATAAGTCTGTCCGAAGATCTGCCAGCTGCATCACCTTCTTCTTGTATATTGTCGAATACTCCAAAGCCTTCTTCTGGTCTTATGATGTGTTCGACCTTGAGATTTAGATTCCAGGACCTAAAGACAAGGAGGCAGCAAATATATTCTAGATTGCAATCAAGCATACCTGGAGTAAAAGCACAAAGGTTTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0002200 GO:0002376 GO:0002377 GO:0002440 GO:0002520 GO:0002566 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0003690 GO:0003697 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0005829 GO:0005856 GO:0005886 GO:0006139 GO:0006259 GO:0006281 GO:0006298 GO:0006310 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0007275 GO:0008150 GO:0008152 GO:0009555 GO:0009791 GO:0009987 GO:0010154 GO:0015630 GO:0016020 GO:0016445 GO:0016446 GO:0016462 GO:0016787 GO:0016788 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0022414 GO:0030983 GO:0031974 GO:0031981 GO:0032135 GO:0032138 GO:0032300 GO:0032389 GO:0032501 GO:0032502 GO:0032991 GO:0033554 GO:0034641 GO:0035770 GO:0036464 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044260 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0046483 GO:0048229 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0050896 GO:0051716 GO:0061458 GO:0070013 GO:0071704 GO:0071944 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363 GO:1990391 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03430 ko03460 map03430 map03460

Pfam Domains

Protein Families

DNA_mis_repair HATPase_c_3 MutL_C

Protein Analysis

603

Amino Acids

65.51

Weight (kDa)

7.54

Isoelectric Point (pI)

52.13

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DNA_mis_repair	PF01119	152 - 269	3.6e-25	DNA mismatch repair protein, C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0009282)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G02460 AT4G02460 AT4G02460 AT4G02460
fragaria_vesca	FvH4_2g25510 FvH4_2g25510 FvH4_2g25510 FvH4_2g25510 FvH4_2g25510
malus_domestica	MD11G1305800.v1.1
prunus_persica	Prupe.8G259200_v2.0.a1 Prupe.8G259200_v2.0.a1
pyrus_communis	pycom11g26760
rosa_chinensis	RchiOBHm_Chr6g0293721
rosa_laevigata	RLG00000011929
rosa_roxburghii	Rroxscaffold_7G00173950
rosa_rugosa	Rorug06G0237600
rosa_samantha	Rh6AG350400 Rh6BG357900 Rh6CG364700 Rh6DG351600
rosa_wichuraiana	Rw6G030510

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	214, 858
AccB1I	GGYRCC	3 cut(s)	143, 230, 1594
AccI	GTMKAC	1 cut(s)	601
AccII	CGCG	3 cut(s)	164, 202, 220
AciI	CCGC	3 cut(s)	105, 202, 220
AclWI	GGATC	4 cut(s)	82, 1047, 1480, 1493
AcoI	YGGCCR	2 cut(s)	79, 102
AcsI	RAATTY	3 cut(s)	262, 688, 1126
AcuI	CTGAAG	3 cut(s)	963, 1443, 1461
AcyI	GRCGYC	2 cut(s)	138, 144
AfaI	GTAC	4 cut(s)	196, 1017, 1158, 1269
AfiI	CCNNNNNNNGG	2 cut(s)	893, 1694
AflII	CTTAAG	2 cut(s)	437, 781
AgeI	ACCGGT	1 cut(s)	268
AgsI	TTSAA	4 cut(s)	334, 688, 1131, 1260
AhlI	ACTAGT	2 cut(s)	812, 1184
AjnI	CCWGG	3 cut(s)	1516, 1731, 1786
AjuI	GAANNNNNNNTTGG	2 cut(s)	1675, 1707
Alw21I	GWGCWC	2 cut(s)	473, 767
Alw26I	GTCTC	2 cut(s)	876, 903
AlwI	GGATC	4 cut(s)	82, 1047, 1480, 1493
AlwNI	CAGNNNCTG	2 cut(s)	72, 1580
AoxI	GGCC	2 cut(s)	79, 102
ApeKI	GCWGC	6 cut(s)	667, 796, 1073, 1232, 1646, 1753
ApoI	RAATTY	3 cut(s)	262, 688, 1126
ArsI	GACNNNNNNTTYG	2 cut(s)	105, 137
AsiGI	ACCGGT	1 cut(s)	268
Asp700I	GAANNNNTTC	3 cut(s)	430, 746, 948
AspLEI	GCGC	5 cut(s)	77, 146, 166, 202, 220
AspS9I	GGNCC	3 cut(s)	61, 1174, 1735
AsuC2I	CCSGG	1 cut(s)	1611
AsuHPI	GGTGA	6 cut(s)	283, 876, 1460, 1547, 1599, 1644
AvaII	GGWCC	3 cut(s)	61, 1174, 1735
AxyI	CCTNAGG	2 cut(s)	1035, 1352
BamHI	GGATCC	1 cut(s)	1485
BanI	GGYRCC	3 cut(s)	143, 230, 1594
BanII	GRGCYC	1 cut(s)	767
BbsI	GAAGAC	2 cut(s)	218, 1358
Bbv12I	GWGCWC	2 cut(s)	473, 767
BbvCI	CCTCAGC	1 cut(s)	969
BbvI	GCAGC	6 cut(s)	679, 808, 1060, 1244, 1633, 1765
BccI	CCATC	4 cut(s)	40, 161, 521, 1468
BceAI	ACGGC	4 cut(s)	92, 193, 213, 231
BciT130I	CCWGG	3 cut(s)	1518, 1733, 1788
BcnI	CCSGG	1 cut(s)	1611
BcoDI	GTCTC	2 cut(s)	876, 903
BcuI	ACTAGT	2 cut(s)	812, 1184
BfaI	CTAG	3 cut(s)	813, 1185, 1767
BfmI	CTRYAG	3 cut(s)	794, 1005, 1074
BfoI	RGCGCY	1 cut(s)	147
BfrI	CTTAAG	2 cut(s)	437, 781
BfuAI	ACCTGC	2 cut(s)	214, 858
BglII	AGATCT	1 cut(s)	1636
BisI	GCNGC	8 cut(s)	105, 221, 668, 797, 1074, 1233, 1647, 1754
BlpI	GCTNAGC	1 cut(s)	1401
BlsI	GCNGC	8 cut(s)	106, 222, 669, 798, 1075, 1234, 1648, 1755
Bme1390I	CCNGG	4 cut(s)	1518, 1611, 1733, 1788
Bme18I	GGWCC	3 cut(s)	61, 1174, 1735
BmgT120I	GGNCC	3 cut(s)	61, 1174, 1735
BmiI	GGNNCC	6 cut(s)	145, 232, 849, 1358, 1487, 1596
BmrFI	CCNGG	4 cut(s)	1518, 1611, 1733, 1788
BmsI	GCATC	5 cut(s)	679, 1048, 1283, 1378, 1658
BpiI	GAAGAC	2 cut(s)	218, 1358
BpmI	CTGGAG	3 cut(s)	1032, 1539, 1809
Bpu10I	CCTNAGC	1 cut(s)	969
Bpu1102I	GCTNAGC	1 cut(s)	1401
BpuEI	CTTGAG	1 cut(s)	1738
BpuMI	CCSGG	1 cut(s)	1611
BsaBI	GATNNNNATC	1 cut(s)	1774
BsaHI	GRCGYC	2 cut(s)	138, 144
BsaI	GGTCTC	2 cut(s)	876, 903
BsaJI	CCNNGG	2 cut(s)	57, 1177
BsaWI	WCCGGW	1 cut(s)	268
BsaXI	ACNNNNNCTCC	1 cut(s)	31
Bsc4I	CCNNNNNNNGG	2 cut(s)	893, 1694
Bse118I	RCCGGY	3 cut(s)	77, 140, 268
Bse1I	ACTGG	2 cut(s)	1285, 1508
Bse21I	CCTNAGG	2 cut(s)	1035, 1352
Bse8I	GATNNNNATC	1 cut(s)	1774
BseBI	CCWGG	3 cut(s)	1518, 1733, 1788
BseDI	CCNNGG	2 cut(s)	57, 1177
BseGI	GGATG	4 cut(s)	471, 670, 925, 1460
BseJI	GATNNNNATC	1 cut(s)	1774
BseLI	CCNNNNNNNGG	2 cut(s)	893, 1694
BseMII	CTCAG	5 cut(s)	887, 960, 1026, 1219, 1415
BseNI	ACTGG	2 cut(s)	1285, 1508
BseRI	GAGGAG	4 cut(s)	6, 860, 986, 1053
BseX3I	CGGCCG	1 cut(s)	102
BseXI	GCAGC	6 cut(s)	679, 808, 1060, 1244, 1633, 1765
BseYI	CCCAGC	1 cut(s)	663
BsgI	GTGCAG	1 cut(s)	358
Bsh1236I	CGCG	3 cut(s)	164, 202, 220
Bsh1285I	CGRYCG	1 cut(s)	105
BshFI	GGCC	2 cut(s)	81, 104
BshNI	GGYRCC	3 cut(s)	143, 230, 1594
BshTI	ACCGGT	1 cut(s)	268
BsiEI	CGRYCG	1 cut(s)	105
BsiHKAI	GWGCWC	2 cut(s)	473, 767
BsiSI	CCGG	5 cut(s)	78, 141, 269, 956, 1611
BslFI	GGGAC	1 cut(s)	561
BslI	CCNNNNNNNGG	2 cut(s)	893, 1694
BsmAI	GTCTC	2 cut(s)	876, 903
BsmFI	GGGAC	1 cut(s)	561
BsmI	GAATGC	2 cut(s)	340, 385
BsnI	GGCC	2 cut(s)	81, 104
Bso31I	GGTCTC	2 cut(s)	876, 903
Bsp1286I	GDGCHC	2 cut(s)	473, 767
Bsp1407I	TGTACA	1 cut(s)	1267
Bsp143I	GATC	7 cut(s)	87, 159, 1039, 1222, 1407, 1485, 1636
Bsp1720I	GCTNAGC	1 cut(s)	1401
Bsp19I	CCATGG	1 cut(s)	1177
BspACI	CCGC	3 cut(s)	105, 202, 220
BspANI	GGCC	2 cut(s)	81, 104
BspCNI	CTCAG	5 cut(s)	886, 961, 1027, 1218, 1414
BspFNI	CGCG	3 cut(s)	164, 202, 220
BspHI	TCATGA	1 cut(s)	1099
BspLI	GGNNCC	6 cut(s)	145, 232, 849, 1358, 1487, 1596
BspMAI	CTGCAG	2 cut(s)	798, 1078
BspMI	ACCTGC	2 cut(s)	214, 858
BspPI	GGATC	4 cut(s)	82, 1047, 1480, 1493
BspT107I	GGYRCC	3 cut(s)	143, 230, 1594
BspTI	CTTAAG	2 cut(s)	437, 781
BspTNI	GGTCTC	2 cut(s)	876, 903
BsrFI	RCCGGY	3 cut(s)	77, 140, 268
BsrGI	TGTACA	1 cut(s)	1267
BsrI	ACTGG	2 cut(s)	1285, 1508
BssAI	RCCGGY	3 cut(s)	77, 140, 268
BssECI	CCNNGG	2 cut(s)	57, 1177
BssMI	GATC	7 cut(s)	87, 159, 1039, 1222, 1407, 1485, 1636
BssNI	GRCGYC	2 cut(s)	138, 144
BssT1I	CCWWGG	1 cut(s)	1177
Bst2UI	CCWGG	3 cut(s)	1518, 1733, 1788
Bst4CI	ACNGT	5 cut(s)	238, 244, 697, 1297, 1330
BstACI	GRCGYC	2 cut(s)	138, 144
BstAFI	CTTAAG	2 cut(s)	437, 781
BstAPI	GCANNNNNTGC	2 cut(s)	1397, 1601
BstAUI	TGTACA	1 cut(s)	1267
BstC8I	GCNNGC	4 cut(s)	79, 142, 852, 1644
BstDEI	CTNAG	6 cut(s)	873, 969, 1035, 1205, 1352, 1401
BstDSI	CCRYGG	2 cut(s)	57, 1177
BstENI	CCTNNNNNAGG	1 cut(s)	891
BstF5I	GGATG	4 cut(s)	471, 670, 925, 1460
BstFNI	CGCG	3 cut(s)	164, 202, 220
BstH2I	RGCGCY	1 cut(s)	147
BstHHI	GCGC	5 cut(s)	77, 146, 166, 202, 220
BstKTI	GATC	7 cut(s)	90, 162, 1042, 1225, 1410, 1488, 1639
BstMAI	GTCTC	2 cut(s)	876, 903
BstMBI	GATC	7 cut(s)	87, 159, 1039, 1222, 1407, 1485, 1636
BstMCI	CGRYCG	1 cut(s)	105
BstMWI	GCNNNNNNNGC	7 cut(s)	350, 418, 965, 974, 1397, 1592, 1601
BstNI	CCWGG	3 cut(s)	1518, 1733, 1788
BstSCI	CCNGG	4 cut(s)	1516, 1609, 1731, 1786
BstSFI	CTRYAG	3 cut(s)	794, 1005, 1074
BstUI	CGCG	3 cut(s)	164, 202, 220
BstV1I	GCAGC	6 cut(s)	679, 808, 1060, 1244, 1633, 1765
BstV2I	GAAGAC	2 cut(s)	218, 1358
BstX2I	RGATCY	2 cut(s)	1485, 1636
BstYI	RGATCY	2 cut(s)	1485, 1636
BstZI	CGGCCG	1 cut(s)	102
Bsu36I	CCTNAGG	2 cut(s)	1035, 1352
BsuRI	GGCC	2 cut(s)	81, 104
BtgI	CCRYGG	2 cut(s)	57, 1177
BtgZI	GCGATG	1 cut(s)	1071
BtsCI	GGATG	4 cut(s)	471, 670, 925, 1460
BtsI	GCAGTG	1 cut(s)	1581
BtsIMutI	CAGTG	2 cut(s)	693, 1581
BveI	ACCTGC	2 cut(s)	214, 858
Cac8I	GCNNGC	4 cut(s)	79, 142, 852, 1644
CaiI	CAGNNNCTG	2 cut(s)	72, 1580
CciI	TCATGA	1 cut(s)	1099
CfoI	GCGC	5 cut(s)	77, 146, 166, 202, 220
Cfr10I	RCCGGY	3 cut(s)	77, 140, 268
Cfr13I	GGNCC	3 cut(s)	61, 1174, 1735
CseI	GACGC	1 cut(s)	146
Csp6I	GTAC	4 cut(s)	195, 1016, 1157, 1268
CspAI	ACCGGT	1 cut(s)	268
CspCI	CAANNNNNGTGG	2 cut(s)	387, 422
CviAII	CATG	7 cut(s)	568, 1100, 1121, 1178, 1248, 1313, 1544
CviQI	GTAC	4 cut(s)	195, 1016, 1157, 1268
DdeI	CTNAG	6 cut(s)	873, 969, 1035, 1205, 1352, 1401
DinI	GGCGCC	1 cut(s)	145
DpnI	GATC	7 cut(s)	89, 161, 1041, 1224, 1409, 1487, 1638
DpnII	GATC	7 cut(s)	87, 159, 1039, 1222, 1407, 1485, 1636
EaeI	YGGCCR	2 cut(s)	79, 102
EagI	CGGCCG	1 cut(s)	102
Ecl136II	GAGCTC	1 cut(s)	765
EclXI	CGGCCG	1 cut(s)	102
Eco130I	CCWWGG	1 cut(s)	1177
Eco24I	GRGCYC	1 cut(s)	767
Eco31I	GGTCTC	2 cut(s)	876, 903
Eco47I	GGWCC	3 cut(s)	61, 1174, 1735
Eco52I	CGGCCG	1 cut(s)	102
Eco53kI	GAGCTC	1 cut(s)	765
Eco57I	CTGAAG	3 cut(s)	963, 1443, 1461
Eco81I	CCTNAGG	2 cut(s)	1035, 1352
EcoICRI	GAGCTC	1 cut(s)	765
EcoNI	CCTNNNNNAGG	1 cut(s)	891
EcoO109I	RGGNCCY	1 cut(s)	1735
EcoRII	CCWGG	3 cut(s)	1516, 1731, 1786
EcoT14I	CCWWGG	1 cut(s)	1177
EcoT38I	GRGCYC	1 cut(s)	767
EgeI	GGCGCC	1 cut(s)	145
EheI	GGCGCC	1 cut(s)	145
ErhI	CCWWGG	1 cut(s)	1177
FaeI	CATG	7 cut(s)	571, 1103, 1124, 1181, 1251, 1316, 1547
FaqI	GGGAC	1 cut(s)	561
FatI	CATG	7 cut(s)	567, 1099, 1120, 1177, 1247, 1312, 1543
FauI	CCCGC	1 cut(s)	195
FblI	GTMKAC	1 cut(s)	601
Fnu4HI	GCNGC	8 cut(s)	105, 221, 668, 797, 1074, 1233, 1647, 1754
FokI	GGATG	4 cut(s)	478, 657, 932, 1447
FriOI	GRGCYC	1 cut(s)	767
Fsp4HI	GCNGC	8 cut(s)	105, 221, 668, 797, 1074, 1233, 1647, 1754
FspBI	CTAG	3 cut(s)	813, 1185, 1767
GlaI	GCGC	5 cut(s)	76, 145, 165, 201, 219
GluI	GCNGC	8 cut(s)	105, 221, 668, 797, 1074, 1233, 1647, 1754
GsaI	CCCAGC	1 cut(s)	667
GsuI	CTGGAG	3 cut(s)	1032, 1539, 1809
HaeII	RGCGCY	1 cut(s)	147
HaeIII	GGCC	2 cut(s)	81, 104
HapII	CCGG	5 cut(s)	78, 141, 269, 956, 1611
HgaI	GACGC	1 cut(s)	146
HhaI	GCGC	5 cut(s)	77, 146, 166, 202, 220
Hin1I	GRCGYC	2 cut(s)	138, 144
Hin1II	CATG	7 cut(s)	571, 1103, 1124, 1181, 1251, 1316, 1547
Hin6I	GCGC	5 cut(s)	75, 144, 164, 200, 218
HinP1I	GCGC	5 cut(s)	75, 144, 164, 200, 218
HincII	GTYRAC	1 cut(s)	602
HindII	GTYRAC	1 cut(s)	602
HindIII	AAGCTT	1 cut(s)	629
HpaII	CCGG	5 cut(s)	78, 141, 269, 956, 1611
HphI	GGTGA	6 cut(s)	283, 876, 1460, 1547, 1599, 1644
Hpy166II	GTNNAC	6 cut(s)	64, 434, 602, 884, 1159, 1556
Hpy8I	GTNNAC	6 cut(s)	64, 434, 602, 884, 1159, 1556
Hpy99I	CGWCG	1 cut(s)	140
HpyAV	CCTTC	9 cut(s)	298, 980, 1046, 1103, 1132, 1165, 1532, 1665, 1698
HpyCH4III	ACNGT	5 cut(s)	238, 244, 697, 1297, 1330
HpyF10VI	GCNNNNNNNGC	7 cut(s)	350, 418, 965, 974, 1397, 1592, 1601
HpyF3I	CTNAG	6 cut(s)	873, 969, 1035, 1205, 1352, 1401
Hsp92I	GRCGYC	2 cut(s)	138, 144
Hsp92II	CATG	7 cut(s)	571, 1103, 1124, 1181, 1251, 1316, 1547
HspAI	GCGC	5 cut(s)	75, 144, 164, 200, 218
KasI	GGCGCC	1 cut(s)	143
KroI	GCCGGC	2 cut(s)	77, 140
KroNI	GCCGGC	2 cut(s)	79, 142
Kzo9I	GATC	7 cut(s)	87, 159, 1039, 1222, 1407, 1485, 1636
LmnI	GCTCC	3 cut(s)	770, 847, 1066
Lsp1109I	GCAGC	6 cut(s)	679, 808, 1060, 1244, 1633, 1765
LweI	GCATC	5 cut(s)	679, 1048, 1283, 1378, 1658
MaeI	CTAG	3 cut(s)	813, 1185, 1767
MaeIII	GTNAC	6 cut(s)	238, 451, 724, 824, 1291, 1297
MalI	GATC	7 cut(s)	89, 161, 1041, 1224, 1409, 1487, 1638
MboI	GATC	7 cut(s)	87, 159, 1039, 1222, 1407, 1485, 1636
MboII	GAAGA	7 cut(s)	223, 956, 1118, 1358, 1646, 1650, 1683
MfeI	CAATTG	1 cut(s)	1190
MflI	RGATCY	2 cut(s)	1485, 1636
MhlI	GDGCHC	2 cut(s)	473, 767
Mly113I	GGCGCC	1 cut(s)	144
MmeI	TCCRAC	2 cut(s)	542, 725
MreI	CGCCGGCG	1 cut(s)	140
MroNI	GCCGGC	2 cut(s)	77, 140
MroXI	GAANNNNTTC	3 cut(s)	430, 746, 948
MseI	TTAA	8 cut(s)	414, 438, 782, 834, 1151, 1167, 1281, 1395
MspA1I	CMGCKG	1 cut(s)	1646
MspCI	CTTAAG	2 cut(s)	437, 781
MspI	CCGG	5 cut(s)	78, 141, 269, 956, 1611
MspR9I	CCNGG	4 cut(s)	1518, 1611, 1733, 1788
MunI	CAATTG	1 cut(s)	1190
Mva1269I	GAATGC	2 cut(s)	340, 385
MvaI	CCWGG	3 cut(s)	1518, 1733, 1788
MvnI	CGCG	3 cut(s)	164, 202, 220
MwoI	GCNNNNNNNGC	7 cut(s)	350, 418, 965, 974, 1397, 1592, 1601
NaeI	GCCGGC	2 cut(s)	79, 142
NarI	GGCGCC	1 cut(s)	144
NciI	CCSGG	1 cut(s)	1611
NcoI	CCATGG	1 cut(s)	1177
NdeII	GATC	7 cut(s)	87, 159, 1039, 1222, 1407, 1485, 1636
NgoMIV	GCCGGC	2 cut(s)	77, 140
NlaIII	CATG	7 cut(s)	571, 1103, 1124, 1181, 1251, 1316, 1547
NlaIV	GGNNCC	6 cut(s)	145, 232, 849, 1358, 1487, 1596
NmeAIII	GCCGAG	1 cut(s)	80
NmuCI	GTSAC	1 cut(s)	451
PagI	TCATGA	1 cut(s)	1099
PcsI	WCGNNNNNNNCGW	1 cut(s)	234
PctI	GAATGC	2 cut(s)	340, 385
PdiI	GCCGGC	2 cut(s)	79, 142
PdmI	GAANNNNTTC	3 cut(s)	430, 746, 948
PfoI	TCCNGGA	2 cut(s)	1516, 1731
PinAI	ACCGGT	1 cut(s)	268
PkrI	GCNGC	8 cut(s)	106, 222, 669, 798, 1075, 1234, 1648, 1755
PluTI	GGCGCC	1 cut(s)	147
PpuMI	RGGWCCY	1 cut(s)	1735
Psp124BI	GAGCTC	1 cut(s)	767
Psp5II	RGGWCCY	1 cut(s)	1735
Psp6I	CCWGG	3 cut(s)	1516, 1731, 1786
PspFI	CCCAGC	1 cut(s)	663
PspGI	CCWGG	3 cut(s)	1516, 1731, 1786
PspN4I	GGNNCC	6 cut(s)	145, 232, 849, 1358, 1487, 1596
PspPI	GGNCC	3 cut(s)	61, 1174, 1735
PspPPI	RGGWCCY	1 cut(s)	1735
PstI	CTGCAG	2 cut(s)	798, 1078
PstNI	CAGNNNCTG	2 cut(s)	72, 1580
PsuI	RGATCY	2 cut(s)	1485, 1636
PvuII	CAGCTG	1 cut(s)	1646
RsaI	GTAC	4 cut(s)	196, 1017, 1158, 1269
RsaNI	GTAC	4 cut(s)	195, 1016, 1157, 1268
SacI	GAGCTC	1 cut(s)	767
SalI	GTCGAC	1 cut(s)	600
SaqAI	TTAA	8 cut(s)	414, 438, 782, 834, 1151, 1167, 1281, 1395
SatI	GCNGC	8 cut(s)	105, 221, 668, 797, 1074, 1233, 1647, 1754
Sau3AI	GATC	7 cut(s)	87, 159, 1039, 1222, 1407, 1485, 1636
Sau96I	GGNCC	3 cut(s)	61, 1174, 1735
ScrFI	CCNGG	4 cut(s)	1518, 1611, 1733, 1788
SduI	GDGCHC	2 cut(s)	473, 767
SfaNI	GCATC	5 cut(s)	679, 1048, 1283, 1378, 1658
SfcI	CTRYAG	3 cut(s)	794, 1005, 1074
SfoI	GGCGCC	1 cut(s)	145
SgrAI	CRCCGGYG	1 cut(s)	140
SinI	GGWCC	3 cut(s)	61, 1174, 1735
SmlI	CTYRAG	3 cut(s)	437, 781, 1717
SmoI	CTYRAG	3 cut(s)	437, 781, 1717
SpeI	ACTAGT	2 cut(s)	812, 1184
SsiI	CCGC	3 cut(s)	105, 202, 220
SspDI	GGCGCC	1 cut(s)	143
SspI	AATATT	2 cut(s)	448, 1469
SspMI	CTAG	3 cut(s)	813, 1185, 1767
SstI	GAGCTC	1 cut(s)	767
StyD4I	CCNGG	4 cut(s)	1516, 1609, 1731, 1786
StyI	CCWWGG	1 cut(s)	1177
TaaI	ACNGT	5 cut(s)	238, 244, 697, 1297, 1330
TaqI	TCGA	8 cut(s)	93, 123, 135, 156, 601, 1225, 1673, 1712
TatI	WGTACW	2 cut(s)	1156, 1267
TauI	GCSGC	2 cut(s)	107, 223
Tru1I	TTAA	8 cut(s)	414, 438, 782, 834, 1151, 1167, 1281, 1395
Tru9I	TTAA	8 cut(s)	414, 438, 782, 834, 1151, 1167, 1281, 1395
TscAI	CASTG	2 cut(s)	700, 1581
TseFI	GTSAC	1 cut(s)	451
TseI	GCWGC	6 cut(s)	667, 796, 1073, 1232, 1646, 1753
Tsp45I	GTSAC	1 cut(s)	451
TspDTI	ATGAA	4 cut(s)	1119, 1137, 1229, 1236
TspGWI	ACGGA	2 cut(s)	9, 46
TspRI	CASTG	2 cut(s)	700, 1581
Vha464I	CTTAAG	2 cut(s)	437, 781
VpaK11BI	GGWCC	3 cut(s)	61, 1174, 1735
XagI	CCTNNNNNAGG	1 cut(s)	891
XapI	RAATTY	3 cut(s)	262, 688, 1126
XbaI	TCTAGA	1 cut(s)	1766
XmiI	GTMKAC	1 cut(s)	601
XmnI	GAANNNNTTC	3 cut(s)	430, 746, 948
XspI	CTAG	3 cut(s)	813, 1185, 1767

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.