Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr11

Orthogroup ID

OG0009282

Physical Location & Seq

Genomic Coordinates Forward (+)

29242420 .. 29247309

Gene Structure 4890 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom11g26760.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2955 bp

ATGGAAGCAGCAACGGCTCCGTCCGATTCCCCCACAATAAAGCCGATAAACAAGGGCGTGGTGCATAGGATCTGCGCCGGCCAAGTGATTCTCGACCTCTCCGCCGCCGTGAAGGAATTGGTGGAGAACAGCCTTGACGCCGGCGCCACCAGCATCGAAATCGCCCTCAAAGACTACGGCAAAGAGTGGTTCCAGATCGTCGACAATGGCTGTGGCATTTCGCCGAACAACTTCCGTGTCCTTGCCCTCAAGCATCACACCTCGAAGCTCGCTGGGTTCCCGGACCTCCAGTCCCTCACCACCTTCGGCTTCCGCGGCGAGGCCTTGAGCTCTCTCTGTGCTTTGGGGGATTTGACTGTGGAAACCAGGACCAAGAACGAGACCGTCGCCACGCACTTGACATTCGACCATTCGGGTTTGTTGGTCGCCGAGAAGAAGACCGCCCGGCAAGTGGGCACTACCGTCACGGTGAAGAACTTGTTTTCGAATTTACCAGTGCGGTGCAAGGAATTCAGCCGCAACATTCGGAAGGAGTATGGAAAGCTTGTTTCTTTATTGAATGCCTATGCTCTTATTGCAAAAGGCGTTCGGTTAGTCTGCACGAATGCTACTGGTAAAAATGCGAAATCTGTGGTACTTAAAACACAAGGGAGTGGTTCCCTTAAAGATAACATTGTCACACTGTTTGGATTGACCACGTTCAATTGCTTAGAACCAGTGAGTATATCTGTGTCTGAAAGTTGCAAGGTTGATGGTTTTCTGTCCAAGTCGGGACAGGGTAGTGGGCGAAATATGGGAGATAGACAGTACTTTTTTGTGAATGGTAGGCCGGTGGATATGCCTAAAGTTACCAAGCTTGTGAATGAGTTGTATAGAAGAGCAAATTCCCAGCAGCACCCCATTGCAATAATGAATTTTACGGTTCCAACAAGAGCGTGTGATGTCAATGTAACTCCTGATAAAAGGAAAGTGTTCTTTTCTGATGAAAGCACCATACTGGTTGCCCTTAGGGAGGGTTTACAGGAGATTTATTCTTCAAGTAATGCTCATTACACTGTAAATAAAATTGAGGACCCTACTAAGGAAGCAGATAGGTCAGACTTGTGTTCTCCTCGTCAAAGGTCTAAGTTTCTGAAACAATCGCCTACAGAGGATGATGTTTCTGAAGAAGTGAGTATTGCCACTCCAGGCGGTTTGCTGCAAACATATTCTCCAAGTGATGCTCCTTGTTCTATTAATAAAGTTGAGGAGGTGCCTACTAAGGAAGCAGGTAGCTCTGAGTCATGTTTTCGTCGTCAAATGTCTCGTATGTTCCCGAAGCAATCATCTCTGGATGGCAGTGTTCCCGAAGAAATTCATGTTAAGGATCACCTTGCAGAAGGCAATGCTCGTCCGAAAGCTCCTGAAACTGAGTCTGAGTACACCGATGATGTAGAAGAGTTGAGCCTAGAAGATGCAATGAGCAAGGGCTTTACTCTTAGAGTACACAGCAGTAAGAAGGTTGGTGGTAGTAGTAGCAAATTAACAACAGATATCAACAGTATGACAACTGATCAAACTCATTCTCTTTCAAGAGTAGTTGAGAATGCTGCCAATGGAGATTCATGTTGTCGTTCAATCTCTGTTCAATCATCACTCAATCAATTTGTGACCGTAAGTAAAAGAAAACATGAAAATATTAGTACAGTGCTATCTGAAATGCCTGTCCTAAGGAACCGAGCTCTTCATTCTCACTCCAAGGAAAGCACTTCTGATTTGCATGCTACTGCTTCAAACTCTCCTGTTCGACATGACCAGGCCAATGCTTCTTCTGGGATTGATAACTCTGCTGAAGCTGATGAGAATGAGCCATCCAAGTATCTTAGAGCAGACAAGATTCTCAATAAAATTAGAGGTCCAATTTCTGTTGGGGGCAACACTAAAGATCTCAATCCTAGAGAGGATGTACAGCCTCAACATATAGCAGATCCTCTTTCTAATATGGCATCACCTGCTTCACCTAGCGGAGGTCTAAATTGTTTGTCTGAAGATCTTCCTGTCCCAGCTCCATCACCTTCTTGTATACTATTAGACACTCCAAAGACTTCTTCTGGTGTTATGATGTGTTCAACCTTGCAATTTAGCTTTCAAGACCTAAAAACAAGGAGGCTGCGGATGTTGTCTAGATCGAAATCAAGCTTACCTGGAGGAGTAAAAGCACAAAGGTGCTTTGCTGCTGCAACGCTTGAGCTTTCTCAATCAGAAAACGAGGAGCGGAAAGCAAGGGCTTTAGCTGCAGCTACTATTGAGTTGGAAAGACTTTTTAGAAAGCAAGATTTTGGCAGAATGAAGGTAATTGGGCAATTCAATCTTGGCTTCATCATTGGGAAGTTAGATCAAGATCTGTTTATTGTGGATCAACATGCAGCTGATGAGAAGTACAATTTTGAGCGTCTATCACAATCTACTATCTTAAACCAACAGCCTCTTCTTCGGCCATTGAGGTTAGAGTTATCTCCTCAGGAAGAAGTTGTTGCTTCAATGCACATAGACATAATCAGGAAAAATGGATTCTCTTTGGAAGAGGATCCACAGGCTCCGCCTGGGCAACATTTTAAATTGAAAGCTGTCCCCTTCAGTAAAAACATAACTTTTGGAGTTGAAGATGTCAAGGACCTGATTTCCACTCTTGCTGATAGTCACGGGGAATGCTCAGTCATGGGGAGTTATAAGACGGACACAGTTGATTCTGTTTGCCCATCAAGAGTTCGTGCAATGCTAGCATCACGCGCATGCAGATCATCTGTTATGATTGGGGACGCCCTTGGAAGAAATGAGATGCAGAAGATTCTTGAGCATTTGGCGGGTCTGAAGTCTCCTTGGAATTGCCCGCATGGCAGGCCGACTATGCGCCATTTGGTCGACTTGAAAACCATACGCAGAAGGTCCGAAGAAGGCGATGATGAAGACTCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0002200 GO:0002376 GO:0002377 GO:0002440 GO:0002520 GO:0002566 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0003690 GO:0003697 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0005829 GO:0005856 GO:0005886 GO:0006139 GO:0006259 GO:0006281 GO:0006298 GO:0006310 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0007275 GO:0008150 GO:0008152 GO:0009555 GO:0009791 GO:0009987 GO:0010154 GO:0015630 GO:0016020 GO:0016445 GO:0016446 GO:0016462 GO:0016787 GO:0016788 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0022414 GO:0030983 GO:0031974 GO:0031981 GO:0032135 GO:0032138 GO:0032300 GO:0032389 GO:0032501 GO:0032502 GO:0032991 GO:0033554 GO:0034641 GO:0035770 GO:0036464 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044260 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0046483 GO:0048229 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0050896 GO:0051716 GO:0061458 GO:0070013 GO:0071704 GO:0071944 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363 GO:1990391 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03430 ko03460 map03430 map03460

Pfam Domains

Protein Families

DNA_mis_repair HATPase_c_3 MutL_C

Protein Analysis

985

Amino Acids

107.74

Weight (kDa)

7.3

Isoelectric Point (pI)

55.67

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
HATPase_c	PF02518	31 - 91	8.3e-06	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
HATPase_c_3	PF13589	34 - 136	1.6e-15	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
DNA_mis_repair	PF01119	227 - 344	1e-24	DNA mismatch repair protein, C-terminal domain
MutL_C	PF08676	779 - 935	8.9e-26	MutL C terminal dimerisation domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0009282)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G02460 AT4G02460 AT4G02460 AT4G02460
fragaria_vesca	FvH4_2g25510 FvH4_2g25510 FvH4_2g25510 FvH4_2g25510 FvH4_2g25510
malus_domestica	MD11G1305800.v1.1
prunus_persica	Prupe.8G259200_v2.0.a1 Prupe.8G259200_v2.0.a1
pyrus_communis	pycom11g26760
rosa_chinensis	RchiOBHm_Chr6g0293721
rosa_laevigata	RLG00000011929
rosa_roxburghii	Rroxscaffold_7G00173950
rosa_rugosa	Rorug06G0237600
rosa_samantha	Rh6AG350400 Rh6BG357900 Rh6CG364700 Rh6DG351600
rosa_wichuraiana	Rw6G030510

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2709
AarI	CACCTGC	1 cut(s)	1999
Acc36I	ACCTGC	2 cut(s)	1259, 1999
AccB1I	GGYRCC	2 cut(s)	143, 1252
AccBSI	CCGCTC	1 cut(s)	2254
AccI	GTMKAC	3 cut(s)	201, 2062, 2901
AccII	CGCG	2 cut(s)	315, 2769
AclWI	GGATC	6 cut(s)	77, 1374, 1961, 2403, 2561, 2574
AcoI	YGGCCR	2 cut(s)	79, 2474
AcsI	RAATTY	5 cut(s)	487, 509, 883, 913, 1353
AcuI	CTGAAG	5 cut(s)	1185, 1851, 2046, 2599, 2870
AcyI	GRCGYC	3 cut(s)	138, 144, 2799
AfaI	GTAC	7 cut(s)	636, 809, 1421, 1485, 1684, 1947, 2420
AfiI	CCNNNNNNNGG	5 cut(s)	319, 451, 1012, 1081, 2006
AhdI	GACNNNNNGTC	1 cut(s)	289
AjnI	CCWGG	5 cut(s)	365, 1186, 1794, 2182, 2581
AjuI	GAANNNNNNNTTGG	4 cut(s)	2071, 2103, 2451, 2483
AleI	CACNNNNGTG	1 cut(s)	2203
Alw21I	GWGCWC	2 cut(s)	332, 1723
Alw26I	GTCTC	3 cut(s)	374, 1308, 2859
AlwI	GGATC	6 cut(s)	77, 1374, 1961, 2403, 2561, 2574
AoxI	GGCC	6 cut(s)	79, 321, 827, 1797, 2474, 2879
ApoI	RAATTY	5 cut(s)	487, 509, 883, 913, 1353
AseI	ATTAAT	1 cut(s)	1236
Asp700I	GAANNNNTTC	4 cut(s)	230, 971, 1353, 2031
AspLEI	GCGC	4 cut(s)	77, 146, 2771, 2892
AspS9I	GGNCC	6 cut(s)	283, 369, 1072, 1895, 2653, 2925
AsuC2I	CCSGG	2 cut(s)	281, 445
AsuHPI	GGTGA	6 cut(s)	289, 481, 1361, 1980, 1989, 2043
AsuII	TTCGAA	1 cut(s)	485
AsuNHI	GCTAGC	1 cut(s)	2758
AvaII	GGWCC	6 cut(s)	283, 369, 1072, 1895, 2653, 2925
AxyI	CCTNAGG	3 cut(s)	1007, 1709, 2499
BaeGI	GKGCMC	1 cut(s)	458
BamHI	GGATCC	1 cut(s)	2566
BanI	GGYRCC	2 cut(s)	143, 1252
BanII	GRGCYC	2 cut(s)	332, 1723
BbsI	GAAGAC	1 cut(s)	443
Bbv12I	GWGCWC	2 cut(s)	332, 1723
BccI	CCATC	5 cut(s)	746, 1328, 1858, 2056, 2746
BceAI	ACGGC	3 cut(s)	30, 92, 193
BcgI	CGANNNNNNTGC	2 cut(s)	142, 176
BciT130I	CCWGG	5 cut(s)	367, 1188, 1796, 2184, 2583
BclI	TGATCA	1 cut(s)	1552
BcnI	CCSGG	2 cut(s)	281, 445
BcoDI	GTCTC	3 cut(s)	374, 1308, 2859
BfaI	CTAG	5 cut(s)	1448, 1935, 2001, 2163, 2759
BfmI	CTRYAG	2 cut(s)	1146, 2274
BfoI	RGCGCY	1 cut(s)	147
BfuAI	ACCTGC	2 cut(s)	1259, 1999
BglI	GCCNNNNNGGC	1 cut(s)	2874
BglII	AGATCT	3 cut(s)	1924, 2029, 2380
BmcAI	AGTACT	1 cut(s)	809
Bme1390I	CCNGG	7 cut(s)	281, 367, 445, 1188, 1796, 2184, 2583
Bme18I	GGWCC	6 cut(s)	283, 369, 1072, 1895, 2653, 2925
BmeRI	GACNNNNNGTC	1 cut(s)	289
BmgT120I	GGNCC	6 cut(s)	283, 369, 1072, 1895, 2653, 2925
BmrFI	CCNGG	7 cut(s)	281, 367, 445, 1188, 1796, 2184, 2583
BmsI	GCATC	7 cut(s)	162, 262, 1210, 1444, 1994, 2771, 2808
BmtI	GCTAGC	1 cut(s)	2762
BpiI	GAAGAC	1 cut(s)	443
BpmI	CTGGAG	3 cut(s)	272, 1170, 2205
Bpu14I	TTCGAA	1 cut(s)	485
BpuEI	CTTGAG	4 cut(s)	233, 346, 2246, 2852
BpuMI	CCSGG	2 cut(s)	281, 445
BsaBI	GATNNNNATC	3 cut(s)	1929, 2170, 2379
BsaHI	GRCGYC	3 cut(s)	138, 144, 2799
BsaI	GGTCTC	1 cut(s)	374
BsaJI	CCNNGG	5 cut(s)	313, 1737, 2582, 2803, 2858
BsaXI	ACNNNNNCTCC	2 cut(s)	1195, 1225
Bsc4I	CCNNNNNNNGG	5 cut(s)	319, 451, 1012, 1081, 2006
Bse118I	RCCGGY	3 cut(s)	77, 140, 829
Bse1I	ACTGG	5 cut(s)	289, 494, 616, 716, 1002
Bse21I	CCTNAGG	3 cut(s)	1007, 1709, 2499
Bse3DI	GCAATG	4 cut(s)	900, 1390, 1464, 2760
Bse8I	GATNNNNATC	3 cut(s)	1929, 2170, 2379
BseBI	CCWGG	5 cut(s)	367, 1188, 1796, 2184, 2583
BseDI	CCNNGG	5 cut(s)	313, 1737, 2582, 2803, 2858
BseGI	GGATG	5 cut(s)	1159, 1339, 1850, 1948, 2160
BseJI	GATNNNNATC	3 cut(s)	1929, 2170, 2379
BseLI	CCNNNNNNNGG	5 cut(s)	319, 451, 1012, 1081, 2006
BseMI	GCAATG	4 cut(s)	900, 1390, 1464, 2760
BseMII	CTCAG	5 cut(s)	1269, 1401, 1407, 2513, 2706
BseNI	ACTGG	5 cut(s)	289, 494, 616, 716, 1002
BseRI	GAGGAG	5 cut(s)	1101, 1262, 2202, 2264, 2487
BseSI	GKGCMC	1 cut(s)	458
BseYI	CCCAGC	3 cut(s)	272, 888, 2041
BsgI	GTGCAG	1 cut(s)	583
Bsh1236I	CGCG	2 cut(s)	315, 2769
BshFI	GGCC	6 cut(s)	81, 323, 829, 1799, 2476, 2881
BshNI	GGYRCC	2 cut(s)	143, 1252
BsiHKAI	GWGCWC	2 cut(s)	332, 1723
BsiSI	CCGG	5 cut(s)	78, 141, 281, 445, 830
BslFI	GGGAC	5 cut(s)	277, 786, 2024, 2594, 2810
BslI	CCNNNNNNNGG	5 cut(s)	319, 451, 1012, 1081, 2006
BsmAI	GTCTC	3 cut(s)	374, 1308, 2859
BsmFI	GGGAC	5 cut(s)	277, 786, 2024, 2594, 2810
BsmI	GAATGC	4 cut(s)	565, 610, 1591, 2693
BsnI	GGCC	6 cut(s)	81, 323, 829, 1799, 2476, 2881
Bso31I	GGTCTC	1 cut(s)	374
Bsp119I	TTCGAA	1 cut(s)	485
Bsp1286I	GDGCHC	3 cut(s)	332, 458, 1723
Bsp1407I	TGTACA	1 cut(s)	1945
BspANI	GGCC	6 cut(s)	81, 323, 829, 1799, 2476, 2881
BspCNI	CTCAG	5 cut(s)	1270, 1402, 1408, 2512, 2705
BspFNI	CGCG	2 cut(s)	315, 2769
BspMAI	CTGCAG	1 cut(s)	2278
BspMI	ACCTGC	2 cut(s)	1259, 1999
BspOI	GCTAGC	1 cut(s)	2762
BspPI	GGATC	6 cut(s)	77, 1374, 1961, 2403, 2561, 2574
BspQI	GCTCTTC	2 cut(s)	871, 1728
BspT104I	TTCGAA	1 cut(s)	485
BspT107I	GGYRCC	2 cut(s)	143, 1252
BspTNI	GGTCTC	1 cut(s)	374
BsrBI	CCGCTC	1 cut(s)	2254
BsrDI	GCAATG	4 cut(s)	900, 1390, 1464, 2760
BsrFI	RCCGGY	3 cut(s)	77, 140, 829
BsrGI	TGTACA	1 cut(s)	1945
BsrI	ACTGG	5 cut(s)	289, 494, 616, 716, 1002
BssAI	RCCGGY	3 cut(s)	77, 140, 829
BssECI	CCNNGG	5 cut(s)	313, 1737, 2582, 2803, 2858
BssNAI	GTATAC	1 cut(s)	2063
BssNI	GRCGYC	3 cut(s)	138, 144, 2799
BssT1I	CCWWGG	3 cut(s)	1737, 2803, 2858
Bst1107I	GTATAC	1 cut(s)	2063
Bst2UI	CCWGG	5 cut(s)	367, 1188, 1796, 2184, 2583
Bst6I	CTCTTC	5 cut(s)	871, 1431, 1728, 2472, 2556
BstACI	GRCGYC	3 cut(s)	138, 144, 2799
BstAPI	GCANNNNNTGC	1 cut(s)	1991
BstAUI	TGTACA	1 cut(s)	1945
BstBI	TTCGAA	1 cut(s)	485
BstC8I	GCNNGC	8 cut(s)	79, 142, 270, 1761, 2760, 2773, 2870, 2879
BstDSI	CCRYGG	1 cut(s)	313
BstENI	CCTNNNNNAGG	2 cut(s)	1010, 2004
BstF5I	GGATG	5 cut(s)	1159, 1339, 1850, 1948, 2160
BstFNI	CGCG	2 cut(s)	315, 2769
BstH2I	RGCGCY	1 cut(s)	147
BstHHI	GCGC	4 cut(s)	77, 146, 2771, 2892
BstMAI	GTCTC	3 cut(s)	374, 1308, 2859
BstNI	CCWGG	5 cut(s)	367, 1188, 1796, 2184, 2583
BstNSI	RCATGY	3 cut(s)	1763, 2405, 2775
BstSCI	CCNGG	7 cut(s)	279, 365, 443, 1186, 1794, 2182, 2581
BstSFI	CTRYAG	2 cut(s)	1146, 2274
BstSLI	GKGCMC	1 cut(s)	458
BstUI	CGCG	2 cut(s)	315, 2769
BstV2I	GAAGAC	1 cut(s)	443
BstX2I	RGATCY	6 cut(s)	69, 1924, 1966, 2029, 2380, 2566
BstYI	RGATCY	6 cut(s)	69, 1924, 1966, 2029, 2380, 2566
BstZ17I	GTATAC	1 cut(s)	2063
Bsu36I	CCTNAGG	3 cut(s)	1007, 1709, 2499
BsuRI	GGCC	6 cut(s)	81, 323, 829, 1799, 2476, 2881
BtgI	CCRYGG	1 cut(s)	313
BtsCI	GGATG	5 cut(s)	1159, 1339, 1850, 1948, 2160
BtsI	GCAGTG	1 cut(s)	1345
BtsIMutI	CAGTG	6 cut(s)	501, 680, 723, 1053, 1345, 1692
BveI	ACCTGC	2 cut(s)	1259, 1999
Cac8I	GCNNGC	8 cut(s)	79, 142, 270, 1761, 2760, 2773, 2870, 2879
CfoI	GCGC	4 cut(s)	77, 146, 2771, 2892
Cfr10I	RCCGGY	3 cut(s)	77, 140, 829
Cfr13I	GGNCC	6 cut(s)	283, 369, 1072, 1895, 2653, 2925
Cfr42I	CCGCGG	1 cut(s)	316
CseI	GACGC	3 cut(s)	146, 2420, 2807
Csp6I	GTAC	7 cut(s)	635, 808, 1420, 1484, 1683, 1946, 2419
CspCI	CAANNNNNGTGG	2 cut(s)	193, 228
CviQI	GTAC	7 cut(s)	635, 808, 1420, 1484, 1683, 1946, 2419
DinI	GGCGCC	1 cut(s)	145
DraI	TTTAAA	1 cut(s)	2596
DriI	GACNNNNNGTC	1 cut(s)	289
EaeI	YGGCCR	2 cut(s)	79, 2474
Eam1104I	CTCTTC	5 cut(s)	871, 1431, 1728, 2472, 2556
Eam1105I	GACNNNNNGTC	1 cut(s)	289
EarI	CTCTTC	5 cut(s)	871, 1431, 1728, 2472, 2556
EciI	GGCGGA	2 cut(s)	91, 2568
Ecl136II	GAGCTC	2 cut(s)	330, 1721
Eco130I	CCWWGG	3 cut(s)	1737, 2803, 2858
Eco147I	AGGCCT	1 cut(s)	323
Eco24I	GRGCYC	2 cut(s)	332, 1723
Eco31I	GGTCTC	1 cut(s)	374
Eco32I	GATATC	1 cut(s)	1534
Eco47I	GGWCC	6 cut(s)	283, 369, 1072, 1895, 2653, 2925
Eco53kI	GAGCTC	2 cut(s)	330, 1721
Eco57I	CTGAAG	5 cut(s)	1185, 1851, 2046, 2599, 2870
Eco81I	CCTNAGG	3 cut(s)	1007, 1709, 2499
EcoICRI	GAGCTC	2 cut(s)	330, 1721
EcoNI	CCTNNNNNAGG	2 cut(s)	1010, 2004
EcoO109I	RGGNCCY	2 cut(s)	1072, 2653
EcoRI	GAATTC	1 cut(s)	509
EcoRII	CCWGG	5 cut(s)	365, 1186, 1794, 2182, 2581
EcoRV	GATATC	1 cut(s)	1534
EcoT14I	CCWWGG	3 cut(s)	1737, 2803, 2858
EcoT38I	GRGCYC	2 cut(s)	332, 1723
EgeI	GGCGCC	1 cut(s)	145
EheI	GGCGCC	1 cut(s)	145
ErhI	CCWWGG	3 cut(s)	1737, 2803, 2858
FaqI	GGGAC	5 cut(s)	277, 786, 2024, 2594, 2810
FauI	CCCGC	2 cut(s)	2836, 2877
FbaI	TGATCA	1 cut(s)	1552
FblI	GTMKAC	3 cut(s)	201, 2062, 2901
FokI	GGATG	5 cut(s)	1166, 1346, 1837, 1955, 2167
FriOI	GRGCYC	2 cut(s)	332, 1723
FspBI	CTAG	5 cut(s)	1448, 1935, 2001, 2163, 2759
GlaI	GCGC	4 cut(s)	76, 145, 2770, 2891
GsaI	CCCAGC	3 cut(s)	276, 892, 2045
GsuI	CTGGAG	3 cut(s)	272, 1170, 2205
HaeII	RGCGCY	1 cut(s)	147
HaeIII	GGCC	6 cut(s)	81, 323, 829, 1799, 2476, 2881
HapII	CCGG	5 cut(s)	78, 141, 281, 445, 830
HgaI	GACGC	3 cut(s)	146, 2420, 2807
HhaI	GCGC	4 cut(s)	77, 146, 2771, 2892
Hin1I	GRCGYC	3 cut(s)	138, 144, 2799
Hin6I	GCGC	4 cut(s)	75, 144, 2769, 2890
HinP1I	GCGC	4 cut(s)	75, 144, 2769, 2890
HincII	GTYRAC	2 cut(s)	202, 2902
HindII	GTYRAC	2 cut(s)	202, 2902
HindIII	AAGCTT	3 cut(s)	542, 854, 2176
HpaII	CCGG	5 cut(s)	78, 141, 281, 445, 830
HphI	GGTGA	6 cut(s)	289, 481, 1361, 1980, 1989, 2043
Hpy166II	GTNNAC	6 cut(s)	202, 1019, 1422, 1486, 2063, 2902
Hpy8I	GTNNAC	6 cut(s)	202, 1019, 1422, 1486, 2063, 2902
Hpy99I	CGWCG	3 cut(s)	203, 389, 1296
HpyCH4IV	ACGT	1 cut(s)	698
HpySE526I	ACGT	1 cut(s)	698
Hsp92I	GRCGYC	3 cut(s)	138, 144, 2799
HspAI	GCGC	4 cut(s)	75, 144, 2769, 2890
KasI	GGCGCC	1 cut(s)	143
KroI	GCCGGC	2 cut(s)	77, 140
KroNI	GCCGGC	2 cut(s)	79, 142
Ksp22I	TGATCA	1 cut(s)	1552
KspI	CCGCGG	1 cut(s)	316
LguI	GCTCTTC	2 cut(s)	871, 1728
LmnI	GCTCC	6 cut(s)	22, 1228, 1405, 2050, 2251, 2581
LweI	GCATC	7 cut(s)	162, 262, 1210, 1444, 1994, 2771, 2808
MaeI	CTAG	5 cut(s)	1448, 1935, 2001, 2163, 2759
MaeII	ACGT	1 cut(s)	698
MaeIII	GTNAC	6 cut(s)	463, 676, 847, 949, 1648, 2678
MbiI	CCGCTC	1 cut(s)	2254
MfeI	CAATTG	1 cut(s)	703
MflI	RGATCY	6 cut(s)	69, 1924, 1966, 2029, 2380, 2566
MhlI	GDGCHC	3 cut(s)	332, 458, 1723
Mly113I	GGCGCC	1 cut(s)	144
MlyI	GAGTC	3 cut(s)	1289, 1421, 2942
MmeI	TCCRAC	2 cut(s)	950, 2271
MreI	CGCCGGCG	1 cut(s)	140
MroNI	GCCGGC	2 cut(s)	77, 140
MroXI	GAANNNNTTC	4 cut(s)	230, 971, 1353, 2031
MseI	TTAA	7 cut(s)	639, 663, 1236, 1362, 1523, 2453, 2595
MslI	CAYNNNNRTG	2 cut(s)	2203, 2770
MspA1I	CMGCKG	2 cut(s)	315, 2408
MspI	CCGG	5 cut(s)	78, 141, 281, 445, 830
MspR9I	CCNGG	7 cut(s)	281, 367, 445, 1188, 1796, 2184, 2583
MunI	CAATTG	1 cut(s)	703
Mva1269I	GAATGC	4 cut(s)	565, 610, 1591, 2693
MvaI	CCWGG	5 cut(s)	367, 1188, 1796, 2184, 2583
MvnI	CGCG	2 cut(s)	315, 2769
NaeI	GCCGGC	2 cut(s)	79, 142
NarI	GGCGCC	1 cut(s)	144
NciI	CCSGG	2 cut(s)	281, 445
NgoMIV	GCCGGC	2 cut(s)	77, 140
NheI	GCTAGC	1 cut(s)	2758
NmeAIII	GCCGAG	1 cut(s)	454
NmuCI	GTSAC	4 cut(s)	463, 676, 1648, 2678
NspI	RCATGY	3 cut(s)	1763, 2405, 2775
NspV	TTCGAA	1 cut(s)	485
OliI	CACNNNNGTG	1 cut(s)	2203
PaeI	GCATGC	2 cut(s)	1763, 2775
PaqCI	CACCTGC	1 cut(s)	1999
PceI	AGGCCT	1 cut(s)	323
PciSI	GCTCTTC	2 cut(s)	871, 1728
PctI	GAATGC	4 cut(s)	565, 610, 1591, 2693
PdiI	GCCGGC	2 cut(s)	79, 142
PdmI	GAANNNNTTC	4 cut(s)	230, 971, 1353, 2031
PfeI	GAWTC	7 cut(s)	26, 88, 1601, 1876, 2550, 2726, 2827
PfoI	TCCNGGA	1 cut(s)	279
PleI	GAGTC	3 cut(s)	1288, 1420, 2942
PluTI	GGCGCC	1 cut(s)	147
PpsI	GAGTC	3 cut(s)	1288, 1420, 2942
PpuMI	RGGWCCY	2 cut(s)	1072, 2653
PshBI	ATTAAT	1 cut(s)	1236
PsiI	TTATAA	1 cut(s)	2709
Psp124BI	GAGCTC	2 cut(s)	332, 1723
Psp5II	RGGWCCY	2 cut(s)	1072, 2653
Psp6I	CCWGG	5 cut(s)	365, 1186, 1794, 2182, 2581
PspFI	CCCAGC	3 cut(s)	272, 888, 2041
PspGI	CCWGG	5 cut(s)	365, 1186, 1794, 2182, 2581
PspPI	GGNCC	6 cut(s)	283, 369, 1072, 1895, 2653, 2925
PspPPI	RGGWCCY	2 cut(s)	1072, 2653
PstI	CTGCAG	1 cut(s)	2278
PsuI	RGATCY	6 cut(s)	69, 1924, 1966, 2029, 2380, 2566
PvuII	CAGCTG	1 cut(s)	2408
RsaI	GTAC	7 cut(s)	636, 809, 1421, 1485, 1684, 1947, 2420
RsaNI	GTAC	7 cut(s)	635, 808, 1420, 1484, 1683, 1946, 2419
RseI	CAYNNNNRTG	2 cut(s)	2203, 2770
SacI	GAGCTC	2 cut(s)	332, 1723
SacII	CCGCGG	1 cut(s)	316
SalI	GTCGAC	2 cut(s)	200, 2900
SapI	GCTCTTC	2 cut(s)	871, 1728
SaqAI	TTAA	7 cut(s)	639, 663, 1236, 1362, 1523, 2453, 2595
Sau96I	GGNCC	6 cut(s)	283, 369, 1072, 1895, 2653, 2925
ScaI	AGTACT	1 cut(s)	809
SchI	GAGTC	3 cut(s)	1289, 1421, 2942
ScrFI	CCNGG	7 cut(s)	281, 367, 445, 1188, 1796, 2184, 2583
SduI	GDGCHC	3 cut(s)	332, 458, 1723
SfaNI	GCATC	7 cut(s)	162, 262, 1210, 1444, 1994, 2771, 2808
SfcI	CTRYAG	2 cut(s)	1146, 2274
SfoI	GGCGCC	1 cut(s)	145
Sfr303I	CCGCGG	1 cut(s)	316
SfuI	TTCGAA	1 cut(s)	485
SgrAI	CRCCGGYG	1 cut(s)	140
SgrBI	CCGCGG	1 cut(s)	316
SinI	GGWCC	6 cut(s)	283, 369, 1072, 1895, 2653, 2925
SmiMI	CAYNNNNRTG	2 cut(s)	2203, 2770
SmlI	CTYRAG	4 cut(s)	248, 325, 2225, 2831
SmoI	CTYRAG	4 cut(s)	248, 325, 2225, 2831
SphI	GCATGC	2 cut(s)	1763, 2775
SseBI	AGGCCT	1 cut(s)	323
SspDI	GGCGCC	1 cut(s)	143
SspI	AATATT	1 cut(s)	1678
SspMI	CTAG	5 cut(s)	1448, 1935, 2001, 2163, 2759
SstI	GAGCTC	2 cut(s)	332, 1723
StuI	AGGCCT	1 cut(s)	323
StyD4I	CCNGG	7 cut(s)	279, 365, 443, 1186, 1794, 2182, 2581
StyI	CCWWGG	3 cut(s)	1737, 2803, 2858
TaiI	ACGT	1 cut(s)	701
TaqI	TCGA	9 cut(s)	93, 156, 201, 263, 405, 485, 1786, 2168, 2901
TatI	WGTACW	6 cut(s)	807, 1419, 1483, 1682, 1945, 2418
TauI	GCSGC	3 cut(s)	107, 318, 519
TfiI	GAWTC	7 cut(s)	26, 88, 1601, 1876, 2550, 2726, 2827
Tru1I	TTAA	7 cut(s)	639, 663, 1236, 1362, 1523, 2453, 2595
Tru9I	TTAA	7 cut(s)	639, 663, 1236, 1362, 1523, 2453, 2595
TscAI	CASTG	6 cut(s)	501, 687, 723, 1060, 1345, 1692
TseFI	GTSAC	4 cut(s)	463, 676, 1648, 2678
Tsp45I	GTSAC	4 cut(s)	463, 676, 1648, 2678
TspDTI	ATGAA	8 cut(s)	926, 999, 1346, 1593, 1686, 1715, 2342, 2347
TspGWI	ACGGA	3 cut(s)	9, 224, 2729
TspRI	CASTG	6 cut(s)	501, 687, 723, 1060, 1345, 1692
VpaK11BI	GGWCC	6 cut(s)	283, 369, 1072, 1895, 2653, 2925
VspI	ATTAAT	1 cut(s)	1236
XagI	CCTNNNNNAGG	2 cut(s)	1010, 2004
XapI	RAATTY	5 cut(s)	487, 509, 883, 913, 1353
XbaI	TCTAGA	1 cut(s)	2162
XceI	RCATGY	3 cut(s)	1763, 2405, 2775
XmiI	GTMKAC	3 cut(s)	201, 2062, 2901
XmnI	GAANNNNTTC	4 cut(s)	230, 971, 1353, 2031
XspI	CTAG	5 cut(s)	1448, 1935, 2001, 2163, 2759
ZrmI	AGTACT	1 cut(s)	809

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.