pycom01g05770

Histidine--tRNA

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr1
Physical Location & Seq
Forward (+)
5635468 .. 5635713
246 bp
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UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 246 bp
ATGACTTCCGGAAAACAAATGGCAGTAAGAATGAAAACATTTTCAACACTCCAAGAGGTCTTTGAGATGCATGGTGCCACAACCCTTGAAACTCCACTATTGGATTTGAGAGAAACCCTCATGGGAAAATATGTGGAAAATTGGGAATCGATTTATGATCTTCCTAAAAAGGTATTTCCCAGTTTCAATTGTTGTCAACTTAAGTGGATTTTTGTTTTTATAATTTCGATGTTTTTCTTGTGGTGA

Protein Analysis

82

Amino Acids

9.62

Weight (kDa)

6.54

Isoelectric Point (pI)

37.61

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 221
AccB1I GGYRCC 1 cut(s) 74
AccIII TCCGGA 1 cut(s) 8
AflII CTTAAG 1 cut(s) 200
AgsI TTSAA 3 cut(s) 45, 89, 187
Aor13HI TCCGGA 1 cut(s) 8
BanI GGYRCC 1 cut(s) 74
BfrI CTTAAG 1 cut(s) 200
BmiI GGNNCC 1 cut(s) 76
BmrI ACTGGG 1 cut(s) 174
BmsI GCATC 1 cut(s) 57
BmuI ACTGGG 1 cut(s) 174
BplI GAGNNNNNCTC 2 cut(s) 102, 134
Bsa29I ATCGAT 1 cut(s) 149
BsaWI WCCGGW 1 cut(s) 8
Bse1I ACTGG 1 cut(s) 180
BseAI TCCGGA 1 cut(s) 8
BseCI ATCGAT 1 cut(s) 149
BseNI ACTGG 1 cut(s) 180
BshNI GGYRCC 1 cut(s) 74
BshVI ATCGAT 1 cut(s) 149
BsiSI CCGG 1 cut(s) 9
Bsp13I TCCGGA 1 cut(s) 8
Bsp143I GATC 1 cut(s) 157
BspDI ATCGAT 1 cut(s) 149
BspEI TCCGGA 1 cut(s) 8
BspLI GGNNCC 1 cut(s) 76
BspT107I GGYRCC 1 cut(s) 74
BspTI CTTAAG 1 cut(s) 200
BsrI ACTGG 1 cut(s) 180
BssMI GATC 1 cut(s) 157
BstAFI CTTAAG 1 cut(s) 200
BstKTI GATC 1 cut(s) 160
BstMBI GATC 1 cut(s) 157
Bsu15I ATCGAT 1 cut(s) 149
BsuTUI ATCGAT 1 cut(s) 149
ClaI ATCGAT 1 cut(s) 149
CspCI CAANNNNNGTGG 4 cut(s) 67, 102, 185, 220
CviAII CATG 2 cut(s) 71, 121
DpnI GATC 1 cut(s) 159
DpnII GATC 1 cut(s) 157
EcoT22I ATGCAT 1 cut(s) 72
FaeI CATG 2 cut(s) 74, 124
FaiI YATR 5 cut(s) 72, 122, 132, 156, 221
FatI CATG 2 cut(s) 70, 120
HapII CCGG 1 cut(s) 9
Hin1II CATG 2 cut(s) 74, 124
HincII GTYRAC 1 cut(s) 197
HindII GTYRAC 1 cut(s) 197
HinfI GANTC 1 cut(s) 146
HpaII CCGG 1 cut(s) 9
Hpy166II GTNNAC 1 cut(s) 197
Hpy188III TCNNGA 1 cut(s) 9
Hpy8I GTNNAC 1 cut(s) 197
HpyCH4V TGCA 1 cut(s) 70
Hsp92II CATG 2 cut(s) 74, 124
Kpn2I TCCGGA 1 cut(s) 8
Kzo9I GATC 1 cut(s) 157
LpnPI CCDG 2 cut(s) 22, 193
LweI GCATC 1 cut(s) 57
MalI GATC 1 cut(s) 159
MboI GATC 1 cut(s) 157
MboII GAAGA 1 cut(s) 152
MfeI CAATTG 1 cut(s) 187
MluCI AATT 3 cut(s) 139, 187, 222
MnlI CCTC 2 cut(s) 49, 128
Mph1103I ATGCAT 1 cut(s) 72
MroI TCCGGA 1 cut(s) 8
MseI TTAA 1 cut(s) 201
MspCI CTTAAG 1 cut(s) 200
MspI CCGG 1 cut(s) 9
MunI CAATTG 1 cut(s) 187
NdeII GATC 1 cut(s) 157
NlaIII CATG 2 cut(s) 74, 124
NlaIV GGNNCC 1 cut(s) 76
NsiI ATGCAT 1 cut(s) 72
PfeI GAWTC 1 cut(s) 146
PsiI TTATAA 1 cut(s) 221
PspN4I GGNNCC 1 cut(s) 76
SaqAI TTAA 1 cut(s) 201
Sau3AI GATC 1 cut(s) 157
SetI ASST 2 cut(s) 60, 174
SfaNI GCATC 1 cut(s) 57
SgeI CNNG 6 cut(s) 21, 65, 83, 98, 133, 192
SmlI CTYRAG 1 cut(s) 200
SmoI CTYRAG 1 cut(s) 200
Sse9I AATT 3 cut(s) 139, 187, 222
TaqI TCGA 2 cut(s) 149, 227
TasI AATT 3 cut(s) 139, 187, 222
TfiI GAWTC 1 cut(s) 146
Tru1I TTAA 1 cut(s) 201
Tru9I TTAA 1 cut(s) 201
TspDTI ATGAA 1 cut(s) 47
Vha464I CTTAAG 1 cut(s) 200
Zsp2I ATGCAT 1 cut(s) 72
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.