Rmu_sc0035133.1_g000001

Histidine--tRNA

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0035133.1
Physical Location & Seq
Forward (+)
1 .. 549
549 bp
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UTR
Exon/CDS
Intron
Rmu_sc0035133.1_g000001.1.cds

Sequence Viewer

Length: 297 bp
ggtactcgtgactttgtaaaagaacaaatgacaatgagaaagaaggcattttcgataatagaagatgtttttgagaggcatggtgccacagcccaggatactccagtttttgaattgagagacactctcatgggcaaatatggggaagactcaaaattgatttatgatcttgttgaccagggaggagagctttcctcactgcgatatgatttcactactccatttgctaggtatgttgctatgaatggcatcacatcctttaaaaggtaccagatttcgaggctatctatgtgctaa

Protein Analysis

98

Amino Acids

11.32

Weight (kDa)

6.79

Isoelectric Point (pI)

26.72

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 267
AccB1I GGYRCC 2 cut(s) 83, 267
AfaI GTAC 2 cut(s) 4, 269
AfiI CCNNNNNNNGG 1 cut(s) 264
AgsI TTSAA 1 cut(s) 113
AjnI CCWGG 2 cut(s) 93, 177
AluBI AGCT 1 cut(s) 190
AluI AGCT 1 cut(s) 190
Alw26I GTCTC 1 cut(s) 114
Asp718I GGTACC 1 cut(s) 267
BaeI ACNNNNGTAYC 2 cut(s) 90, 123
BanI GGYRCC 2 cut(s) 83, 267
BauI CACGAG 1 cut(s) 6
BbsI GAAGAC 1 cut(s) 153
BciT130I CCWGG 2 cut(s) 95, 179
BciVI GTATCC 1 cut(s) 91
BcoDI GTCTC 1 cut(s) 114
BfaI CTAG 1 cut(s) 228
BfuI GTATCC 1 cut(s) 91
Bme1390I CCNGG 2 cut(s) 95, 179
BmiI GGNNCC 2 cut(s) 85, 269
BmrFI CCNGG 2 cut(s) 95, 179
BmsI GCATC 1 cut(s) 258
BpiI GAAGAC 1 cut(s) 153
BplI GAGNNNNNCTC 6 cut(s) 109, 141, 111, 143, 179, 211
BpmI CTGGAG 1 cut(s) 87
BsaJI CCNNGG 2 cut(s) 93, 178
Bsc4I CCNNNNNNNGG 1 cut(s) 264
Bse1I ACTGG 1 cut(s) 104
BseBI CCWGG 2 cut(s) 95, 179
BseDI CCNNGG 2 cut(s) 93, 178
BseGI GGATG 1 cut(s) 254
BseLI CCNNNNNNNGG 1 cut(s) 264
BseNI ACTGG 1 cut(s) 104
BseRI GAGGAG 1 cut(s) 198
BshNI GGYRCC 2 cut(s) 83, 267
BslI CCNNNNNNNGG 1 cut(s) 264
BsmAI GTCTC 1 cut(s) 114
Bsp143I GATC 1 cut(s) 166
BspLI GGNNCC 2 cut(s) 85, 269
BspT107I GGYRCC 2 cut(s) 83, 267
BsrI ACTGG 1 cut(s) 104
BssECI CCNNGG 2 cut(s) 93, 178
BssMI GATC 1 cut(s) 166
BssSI CACGAG 1 cut(s) 6
Bst2BI CACGAG 1 cut(s) 6
Bst2UI CCWGG 2 cut(s) 95, 179
BstENI CCTNNNNNAGG 1 cut(s) 262
BstF5I GGATG 1 cut(s) 254
BstKTI GATC 1 cut(s) 169
BstMAI GTCTC 1 cut(s) 114
BstMBI GATC 1 cut(s) 166
BstNI CCWGG 2 cut(s) 95, 179
BstSCI CCNGG 2 cut(s) 93, 177
BstV2I GAAGAC 1 cut(s) 153
BsuI GTATCC 1 cut(s) 91
BtsCI GGATG 1 cut(s) 254
BtsI GCAGTG 1 cut(s) 197
BtsIMutI CAGTG 1 cut(s) 197
Csp6I GTAC 2 cut(s) 3, 268
CviAII CATG 2 cut(s) 80, 130
CviJI RGCY 3 cut(s) 92, 190, 283
CviKI_1 RGCY 3 cut(s) 92, 190, 283
CviQI GTAC 2 cut(s) 3, 268
DpnI GATC 1 cut(s) 168
DpnII GATC 1 cut(s) 166
DraI TTTAAA 1 cut(s) 262
EcoNI CCTNNNNNAGG 1 cut(s) 262
EcoRII CCWGG 2 cut(s) 93, 177
FaeI CATG 2 cut(s) 83, 133
FaiI YATR 8 cut(s) 81, 131, 141, 165, 207, 234, 242, 290
FatI CATG 2 cut(s) 79, 129
FokI GGATG 1 cut(s) 241
FspBI CTAG 1 cut(s) 228
GsuI CTGGAG 1 cut(s) 87
Hin1II CATG 2 cut(s) 83, 133
HincII GTYRAC 1 cut(s) 175
HindII GTYRAC 1 cut(s) 175
HinfI GANTC 1 cut(s) 149
Hpy166II GTNNAC 1 cut(s) 175
Hpy188III TCNNGA 1 cut(s) 8
Hpy8I GTNNAC 1 cut(s) 175
HpyAV CCTTC 1 cut(s) 37
Hsp92II CATG 2 cut(s) 83, 133
KpnI GGTACC 1 cut(s) 271
Kzo9I GATC 1 cut(s) 166
LpnPI CCDG 6 cut(s) 80, 107, 117, 164, 191, 284
LweI GCATC 1 cut(s) 258
MaeI CTAG 1 cut(s) 228
MaeIII GTNAC 1 cut(s) 8
MalI GATC 1 cut(s) 168
MboI GATC 1 cut(s) 166
MboII GAAGA 2 cut(s) 74, 158
MluCI AATT 2 cut(s) 113, 155
MlyI GAGTC 1 cut(s) 143
MnlI CCTC 4 cut(s) 69, 176, 205, 273
MseI TTAA 1 cut(s) 261
MslI CAYNNNNRTG 1 cut(s) 128
MspR9I CCNGG 2 cut(s) 95, 179
MvaI CCWGG 2 cut(s) 95, 179
NdeII GATC 1 cut(s) 166
NlaIII CATG 2 cut(s) 83, 133
NlaIV GGNNCC 2 cut(s) 85, 269
NmuCI GTSAC 1 cut(s) 8
PleI GAGTC 1 cut(s) 143
PpsI GAGTC 1 cut(s) 143
Psp6I CCWGG 2 cut(s) 93, 177
PspGI CCWGG 2 cut(s) 93, 177
PspN4I GGNNCC 2 cut(s) 85, 269
RsaI GTAC 2 cut(s) 4, 269
RsaNI GTAC 2 cut(s) 3, 268
RseI CAYNNNNRTG 1 cut(s) 128
SaqAI TTAA 1 cut(s) 261
Sau3AI GATC 1 cut(s) 166
SchI GAGTC 1 cut(s) 143
ScrFI CCNGG 2 cut(s) 95, 179
SetI ASST 3 cut(s) 192, 233, 269
SfaNI GCATC 1 cut(s) 258
SmiMI CAYNNNNRTG 1 cut(s) 128
Sse9I AATT 2 cut(s) 113, 155
SspMI CTAG 1 cut(s) 228
StyD4I CCNGG 2 cut(s) 93, 177
TaqI TCGA 2 cut(s) 53, 278
TasI AATT 2 cut(s) 113, 155
Tru1I TTAA 1 cut(s) 261
Tru9I TTAA 1 cut(s) 261
TscAI CASTG 1 cut(s) 204
TseFI GTSAC 1 cut(s) 8
Tsp45I GTSAC 1 cut(s) 8
TspDTI ATGAA 1 cut(s) 257
TspRI CASTG 1 cut(s) 204
XagI CCTNNNNNAGG 1 cut(s) 262
XspI CTAG 1 cut(s) 228
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.