Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr1

Orthogroup ID

OG0005770

Physical Location & Seq

Genomic Coordinates Forward (+)

15102172 .. 15106624

Gene Structure 4453 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1818 bp

ATGGCGGCGGCGGCAGCGGCGAGAATAAACCTCTTCTTAAACCCCACAAACCCCCTCAATTCCAAAGCCACCGCCCATTTCAGAACCCACCTCCGCTTCCAAAGAAGAAGAACCAAAGCTACGTATTTCTGCACCCGCGCCTCCGCAGCTCCCCGCCACGACGATGCATCCGGCGCCGGTGGCAGTGACCCTTTTGTTCTCACCACTCCGCTGTATTACGTGAACGCCCCTCCCCATTTGGGCAGCGCTTACACAACCATCGCCGCCGACGCCATTGCTCGCTTCAAGAGGCTGTTGGGTAAGAAAGTCATTTTCGTCACCGGCACTGACGAGCACGGTGAGAAGATTGCCGCTGCCGCCGCTGCTAATGCAGCCACCCCAGCTCAACACTGTGACCTCATTTCACAATCTTACATTTCGCTCTGGAAACAGTTAGATATTTCGTATGACAAGTTCATTCGGACTACTGACCCCAAGCATGAGGCAATTGTCAAGGAATTTTACTCCAGAGTTCTTGCCAATGGAGACATTTACAGGGCTGACTACGAGGGACTTTACTGTGTTAACTGTGAAGAGTATAAGGATGAGAAAGAACTGCTTGAGAACAACTGTTGCCCTACGCACCTAAAGCCATGTGATGCACGAAAAGAGGATAATTACTTTTTTGCATTGTCCAAGTATCAAAAATCGTTGGAAGAAACATTGGCAACAAATCCGGAATTTGTACAGCCTCCATTCCGTCTTAATGAGGTTCAAGGTTGGGTTAAAAGTGGCCTAAGAGACTTTTCCATTTCTCGAGCATTAGTGGATTGGGGCATCCCCGTTCCTAATGACAGCAAGCAGACAATATATGTTTGGTTTGATGCTCTACTGGGTTATATATCAGCACTATCAGAGGATATGGAGCAACCCAATTTGGAAAGAGCCGTCTCATCAGGGTGGCCTGCCTCGCTACACGTGATTGGCAAGGATATTTTACGTTTCCATGCAGTTTACTGGCCAGCTATGCTCATGTCTGCGGGACTAGGTCTTCCTAAGATGGTGTTTGGTCATGGATTCTTGACAAAGGATGGTATGAAAATGGGGAAGTCGCTAGGGAATACGATTGAACCAAATGATTTGGTTCAGAAATTTGGGTCTGATGCGGTGAGGTACTTCTTCCTAAGAGAGGTGGAGTTCGGAAATGATGGGGACTATTCAGAAGAACGTTTCATCAATATTGTCAATGCTCATCTTGCAAATTCAATTGGAAACCTGCTTAACCGTACTCTGGGACTTCTTAAGAAAAACTGCCAATCAACTTTGGCAGTTGATTCAAGTATTGCAGTTGAAGGAACTACATTCAAGGACACAGTGTTGAAATTGGTTGAAAAAGCTCGGGTTCATTACGGAGACCTCTCTCTTTCATCAGCTTGTGAGGCTGTGCTAGAGATCAGCCATACTGGAAATTTATACATGGATGAGCGTGCACCATGGTCACTCTTTAAGCAAGGGGGTGCTGCTTCTGAAGCTGCCGCGAAGGACCTTGTGATAATACTAGAAACAATGAGGATTATAGCAATTGCATTATCACCTGTCACGCCGAGCTTAAGTTGGAGAATATATGGACAGCTTGGCTACTCAAAGGATCAGTTCGATGCTGCTACCTGGAGCGACACCAAGTGGGGCGGGCTAAAGAGTGGTCAGGTCATGGCGCAGCCTAAACCGATCTTTGCGAGGATTGAAAACCCAACGGAAGAAGAAAACGGGAAGGAAGCACCTAAAAAGGCGGTAAAAAAGCAGAAGCTACCCCAAGACAAACGGGCAGTAGAAGCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003824 GO:0004812 GO:0004825 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006082 GO:0006139 GO:0006399 GO:0006412 GO:0006418 GO:0006431 GO:0006518 GO:0006520 GO:0006725 GO:0006807 GO:0007275 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009791 GO:0009908 GO:0009987 GO:0010467 GO:0016070 GO:0016874 GO:0016875 GO:0019538 GO:0019752 GO:0022414 GO:0032501 GO:0032502 GO:0034641 GO:0034645 GO:0034660 GO:0035670 GO:0043038 GO:0043039 GO:0043043 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0043603 GO:0043604 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044281 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046483 GO:0048367 GO:0048437 GO:0048438 GO:0048440 GO:0048467 GO:0048481 GO:0048608 GO:0048731 GO:0048827 GO:0048856 GO:0061458 GO:0071704 GO:0090304 GO:0090567 GO:0099402 GO:0140098 GO:0140101 GO:1901360 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00450 ko00970 map00450 map00970

Pfam Domains

Protein Families

Anticodon_1 tRNA-synt_1g

Protein Analysis

606

Amino Acids

67.15

Weight (kDa)

7.59

Isoelectric Point (pI)

33.08

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
tRNA-synt_1	PF00133	62 - 276	1.6e-10	tRNA synthetases class I (I, L, M and V)
tRNA-synt_1g	PF09334	66 - 204	2.8e-42	tRNA synthetases class I (M)
tRNA-synt_1e	PF01406	77 - 232	4.1e-07	tRNA synthetases class I (C) catalytic domain
tRNA-synt_1g	PF09334	198 - 424	1.7e-63	tRNA synthetases class I (M)
tRNA-synt_1	PF00133	282 - 390	3.8e-11	tRNA synthetases class I (I, L, M and V)
tRNA-synt_1e	PF01406	342 - 404	7.7e-06	tRNA synthetases class I (C) catalytic domain
Anticodon_3	PF19303	449 - 581	1.1e-09	Anticodon binding domain of methionyl tRNA ligase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005770)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G55400 AT3G55400
fragaria_vesca	FvH4_6g24170 FvH4_6g24170 FvH4_6g51210 FvH4_6g51210 FvH4_6g51210 FvH4_6g51210
malus_domestica	MD01G1125100.v1.1 MD07G1194800.v1.1
prunus_persica	Prupe.2G232400_v2.0.a1 Prupe.2G232400_v2.0.a1
pyrus_communis	pycom01g15130 pycom07g18350 pycom07g18360
rosa_chinensis	RchiOBHm_Chr3g0482991 RchiOBHm_Chr3g0483011
rosa_laevigata	RLG00000023307 RLG00000023309
rosa_multiflora	Rmu_sc0003351.1_g000014
rosa_roxburghii	Rroxscaffold_6G00398740
rosa_rugosa	Rorug03G0202800
rosa_samantha	Rh3AG251600 Rh3BG288100 Rh3CG285600 Rh3DG281300
rosa_wichuraiana	Rw3G022730 Rw3G022760

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1263
AccB1I	GGYRCC	1 cut(s)	173
AccII	CGCG	2 cut(s)	138, 1517
AccIII	TCCGGA	1 cut(s)	715
AclI	AACGTT	1 cut(s)	1207
AclWI	GGATC	1 cut(s)	1635
AcoI	YGGCCR	1 cut(s)	998
AcsI	RAATTY	5 cut(s)	497, 719, 1130, 1240, 1447
AcuI	CTGAAG	1 cut(s)	1527
AcvI	CACGTG	1 cut(s)	958
AcyI	GRCGYC	2 cut(s)	174, 270
AdeI	CACNNNGTG	1 cut(s)	1662
AfaI	GTAC	3 cut(s)	726, 1154, 1267
AfeI	AGCGCT	1 cut(s)	247
AfiI	CCNNNNNNNGG	3 cut(s)	239, 1168, 1270
AflII	CTTAAG	2 cut(s)	1280, 1588
AflIII	ACRYGT	1 cut(s)	955
AjnI	CCWGG	1 cut(s)	1646
Alw21I	GWGCWC	2 cut(s)	336, 1471
Alw26I	GTCTC	4 cut(s)	519, 774, 934, 1386
Alw44I	GTGCAC	1 cut(s)	1467
AlwI	GGATC	1 cut(s)	1635
Ama87I	CYCGRG	2 cut(s)	795, 1377
Aor13HI	TCCGGA	1 cut(s)	715
Aor51HI	AGCGCT	1 cut(s)	247
AoxI	GGCC	3 cut(s)	772, 941, 998
ApaLI	GTGCAC	1 cut(s)	1467
ApoI	RAATTY	5 cut(s)	497, 719, 1130, 1240, 1447
AspLEI	GCGC	4 cut(s)	140, 176, 248, 1696
AspS9I	GGNCC	1 cut(s)	1522
AsuHPI	GGTGA	5 cut(s)	193, 310, 350, 1159, 1563
AvaI	CYCGRG	2 cut(s)	795, 1377
AvaII	GGWCC	1 cut(s)	1522
BaeGI	GKGCMC	1 cut(s)	1471
BalI	TGGCCA	1 cut(s)	1000
BanI	GGYRCC	1 cut(s)	173
BbrPI	CACGTG	1 cut(s)	958
BbsI	GAAGAC	1 cut(s)	1022
Bbv12I	GWGCWC	2 cut(s)	336, 1471
BccI	CCATC	4 cut(s)	266, 1033, 1064, 1181
BceAI	ACGGC	1 cut(s)	911
BcgI	CGANNNNNNTGC	2 cut(s)	257, 291
BciT130I	CCWGG	1 cut(s)	1648
BcoDI	GTCTC	4 cut(s)	519, 774, 934, 1386
BfaI	CTAG	4 cut(s)	1025, 1094, 1427, 1538
BfoI	RGCGCY	2 cut(s)	177, 249
BfrI	CTTAAG	2 cut(s)	1280, 1588
BfuAI	ACCTGC	1 cut(s)	1263
Bme1390I	CCNGG	1 cut(s)	1648
Bme18I	GGWCC	1 cut(s)	1522
BmeT110I	CYCGRG	2 cut(s)	795, 1377
BmgT120I	GGNCC	1 cut(s)	1522
BmiI	GGNNCC	1 cut(s)	175
BmrFI	CCNGG	1 cut(s)	1648
BmrI	ACTGGG	1 cut(s)	881
BmsI	GCATC	7 cut(s)	154, 176, 628, 825, 853, 1132, 1627
BmuI	ACTGGG	1 cut(s)	881
BpiI	GAAGAC	1 cut(s)	1022
BpmI	CTGGAG	2 cut(s)	490, 1669
BpuEI	CTTGAG	1 cut(s)	620
BsaAI	YACGTR	3 cut(s)	123, 220, 958
BsaHI	GRCGYC	2 cut(s)	174, 270
BsaI	GGTCTC	1 cut(s)	1386
BsaJI	CCNNGG	1 cut(s)	1472
BsaWI	WCCGGW	1 cut(s)	715
Bsc4I	CCNNNNNNNGG	3 cut(s)	239, 1168, 1270
Bse118I	RCCGGY	2 cut(s)	176, 320
Bse1I	ACTGG	3 cut(s)	876, 1001, 1447
Bse3DI	GCAATG	1 cut(s)	273
BseAI	TCCGGA	1 cut(s)	715
BseBI	CCWGG	1 cut(s)	1648
BseDI	CCNNGG	1 cut(s)	1472
BseGI	GGATG	5 cut(s)	167, 589, 816, 1075, 1465
BseLI	CCNNNNNNNGG	3 cut(s)	239, 1168, 1270
BseMI	GCAATG	1 cut(s)	273
BseNI	ACTGG	3 cut(s)	876, 1001, 1447
BseSI	GKGCMC	1 cut(s)	1471
BseYI	CCCAGC	1 cut(s)	379
BsgI	GTGCAG	1 cut(s)	115
Bsh1236I	CGCG	2 cut(s)	138, 1517
BshFI	GGCC	3 cut(s)	774, 943, 1000
BshNI	GGYRCC	1 cut(s)	173
BsiHKAI	GWGCWC	2 cut(s)	336, 1471
BsiHKCI	CYCGRG	2 cut(s)	795, 1377
BsiSI	CCGG	4 cut(s)	171, 177, 321, 716
BslFI	GGGAC	4 cut(s)	564, 1035, 1205, 1287
BslI	CCNNNNNNNGG	3 cut(s)	239, 1168, 1270
BsmAI	GTCTC	4 cut(s)	519, 774, 934, 1386
BsmBI	CGTCTC	1 cut(s)	934
BsmFI	GGGAC	4 cut(s)	564, 1035, 1205, 1287
BsnI	GGCC	3 cut(s)	774, 943, 1000
Bso31I	GGTCTC	1 cut(s)	1386
BsoBI	CYCGRG	2 cut(s)	795, 1377
Bsp1286I	GDGCHC	2 cut(s)	336, 1471
Bsp13I	TCCGGA	1 cut(s)	715
Bsp1407I	TGTACA	1 cut(s)	724
Bsp143I	GATC	3 cut(s)	1431, 1627, 1707
Bsp19I	CCATGG	1 cut(s)	1472
BspANI	GGCC	3 cut(s)	774, 943, 1000
BspEI	TCCGGA	1 cut(s)	715
BspFNI	CGCG	2 cut(s)	138, 1517
BspLI	GGNNCC	1 cut(s)	175
BspMI	ACCTGC	1 cut(s)	1263
BspPI	GGATC	1 cut(s)	1635
BspT107I	GGYRCC	1 cut(s)	173
BspTI	CTTAAG	2 cut(s)	1280, 1588
BspTNI	GGTCTC	1 cut(s)	1386
BsrDI	GCAATG	1 cut(s)	273
BsrFI	RCCGGY	2 cut(s)	176, 320
BsrGI	TGTACA	1 cut(s)	724
BsrI	ACTGG	3 cut(s)	876, 1001, 1447
BssAI	RCCGGY	2 cut(s)	176, 320
BssECI	CCNNGG	1 cut(s)	1472
BssMI	GATC	3 cut(s)	1431, 1627, 1707
BssNI	GRCGYC	2 cut(s)	174, 270
BssT1I	CCWWGG	1 cut(s)	1472
Bst2UI	CCWGG	1 cut(s)	1648
Bst4CI	ACNGT	8 cut(s)	338, 392, 432, 560, 569, 611, 1265, 1354
Bst6I	CTCTTC	2 cut(s)	38, 567
BstACI	GRCGYC	2 cut(s)	174, 270
BstAFI	CTTAAG	2 cut(s)	1280, 1588
BstAUI	TGTACA	1 cut(s)	724
BstBAI	YACGTR	3 cut(s)	123, 220, 958
BstC8I	GCNNGC	6 cut(s)	280, 839, 945, 1002, 1467, 1670
BstDEI	CTNAG	3 cut(s)	776, 1035, 1163
BstDSI	CCRYGG	1 cut(s)	1472
BstENI	CCTNNNNNAGG	1 cut(s)	1166
BstF5I	GGATG	5 cut(s)	167, 589, 816, 1075, 1465
BstFNI	CGCG	2 cut(s)	138, 1517
BstH2I	RGCGCY	2 cut(s)	177, 249
BstHHI	GCGC	4 cut(s)	140, 176, 248, 1696
BstKTI	GATC	3 cut(s)	1434, 1630, 1710
BstMAI	GTCTC	4 cut(s)	519, 774, 934, 1386
BstMBI	GATC	3 cut(s)	1431, 1627, 1707
BstNI	CCWGG	1 cut(s)	1648
BstSCI	CCNGG	1 cut(s)	1646
BstSLI	GKGCMC	1 cut(s)	1471
BstSNI	TACGTA	1 cut(s)	123
BstUI	CGCG	2 cut(s)	138, 1517
BstV2I	GAAGAC	1 cut(s)	1022
BsuRI	GGCC	3 cut(s)	774, 943, 1000
BtgI	CCRYGG	1 cut(s)	1472
BtgZI	GCGATG	1 cut(s)	244
BtsCI	GGATG	5 cut(s)	167, 589, 816, 1075, 1465
BtsI	GCAGTG	1 cut(s)	190
BtsIMutI	CAGTG	4 cut(s)	190, 324, 388, 1359
BveI	ACCTGC	1 cut(s)	1263
Cac8I	GCNNGC	6 cut(s)	280, 839, 945, 1002, 1467, 1670
CfoI	GCGC	4 cut(s)	140, 176, 248, 1696
Cfr10I	RCCGGY	2 cut(s)	176, 320
Cfr13I	GGNCC	1 cut(s)	1522
CseI	GACGC	1 cut(s)	278
Csp6I	GTAC	3 cut(s)	725, 1153, 1266
CviAII	CATG	8 cut(s)	479, 633, 986, 1012, 1052, 1456, 1473, 1690
CviQI	GTAC	3 cut(s)	725, 1153, 1266
DdeI	CTNAG	3 cut(s)	776, 1035, 1163
DinI	GGCGCC	1 cut(s)	175
DpnI	GATC	3 cut(s)	1433, 1629, 1709
DpnII	GATC	3 cut(s)	1431, 1627, 1707
DraIII	CACNNNGTG	1 cut(s)	1662
EaeI	YGGCCR	1 cut(s)	998
Eam1104I	CTCTTC	2 cut(s)	38, 567
EarI	CTCTTC	2 cut(s)	38, 567
Eco105I	TACGTA	1 cut(s)	123
Eco130I	CCWWGG	1 cut(s)	1472
Eco31I	GGTCTC	1 cut(s)	1386
Eco47I	GGWCC	1 cut(s)	1522
Eco47III	AGCGCT	1 cut(s)	247
Eco57I	CTGAAG	1 cut(s)	1527
Eco72I	CACGTG	1 cut(s)	958
Eco88I	CYCGRG	2 cut(s)	795, 1377
EcoNI	CCTNNNNNAGG	1 cut(s)	1166
EcoO109I	RGGNCCY	1 cut(s)	1522
EcoRII	CCWGG	1 cut(s)	1646
EcoT14I	CCWWGG	1 cut(s)	1472
EcoT22I	ATGCAT	1 cut(s)	169
EgeI	GGCGCC	1 cut(s)	175
EheI	GGCGCC	1 cut(s)	175
ErhI	CCWWGG	1 cut(s)	1472
Esp3I	CGTCTC	1 cut(s)	934
FaeI	CATG	8 cut(s)	482, 636, 989, 1015, 1055, 1459, 1476, 1693
FalI	AAGNNNNNCTT	2 cut(s)	582, 614
FaqI	GGGAC	4 cut(s)	564, 1035, 1205, 1287
FatI	CATG	8 cut(s)	478, 632, 985, 1011, 1051, 1455, 1472, 1689
FauI	CCCGC	4 cut(s)	143, 161, 1012, 1661
FokI	GGATG	5 cut(s)	154, 596, 803, 1082, 1472
FspBI	CTAG	4 cut(s)	1025, 1094, 1427, 1538
GlaI	GCGC	4 cut(s)	139, 175, 247, 1695
GsaI	CCCAGC	1 cut(s)	383
GsuI	CTGGAG	2 cut(s)	490, 1669
HaeII	RGCGCY	2 cut(s)	177, 249
HaeIII	GGCC	3 cut(s)	774, 943, 1000
HapII	CCGG	4 cut(s)	171, 177, 321, 716
HgaI	GACGC	1 cut(s)	278
HhaI	GCGC	4 cut(s)	140, 176, 248, 1696
Hin1I	GRCGYC	2 cut(s)	174, 270
Hin1II	CATG	8 cut(s)	482, 636, 989, 1015, 1055, 1459, 1476, 1693
Hin6I	GCGC	4 cut(s)	138, 174, 246, 1694
HinP1I	GCGC	4 cut(s)	138, 174, 246, 1694
HincII	GTYRAC	1 cut(s)	565
HindII	GTYRAC	1 cut(s)	565
HindIII	AAGCTT	1 cut(s)	1812
HinfI	GANTC	2 cut(s)	1056, 1313
HpaI	GTTAAC	1 cut(s)	565
HpaII	CCGG	4 cut(s)	171, 177, 321, 716
HphI	GGTGA	5 cut(s)	193, 310, 350, 1159, 1563
Hpy166II	GTNNAC	4 cut(s)	223, 565, 994, 1469
Hpy188I	TCNGA	8 cut(s)	83, 462, 895, 1128, 1141, 1181, 1201, 1507
Hpy188III	TCNNGA	6 cut(s)	286, 424, 507, 716, 795, 1060
Hpy8I	GTNNAC	4 cut(s)	223, 565, 994, 1469
Hpy99I	CGWCG	2 cut(s)	164, 272
HpyAV	CCTTC	3 cut(s)	1325, 1513, 1744
HpyCH4III	ACNGT	8 cut(s)	338, 392, 432, 560, 569, 611, 1265, 1354
HpyCH4IV	ACGT	5 cut(s)	122, 219, 957, 979, 1207
HpyF3I	CTNAG	3 cut(s)	776, 1035, 1163
HpySE526I	ACGT	5 cut(s)	122, 219, 957, 979, 1207
Hsp92I	GRCGYC	2 cut(s)	174, 270
Hsp92II	CATG	8 cut(s)	482, 636, 989, 1015, 1055, 1459, 1476, 1693
HspAI	GCGC	4 cut(s)	138, 174, 246, 1694
KasI	GGCGCC	1 cut(s)	173
Kpn2I	TCCGGA	1 cut(s)	715
KspAI	GTTAAC	1 cut(s)	565
Kzo9I	GATC	3 cut(s)	1431, 1627, 1707
LmnI	GCTCC	3 cut(s)	154, 904, 1650
LweI	GCATC	7 cut(s)	154, 176, 628, 825, 853, 1132, 1627
MaeI	CTAG	4 cut(s)	1025, 1094, 1427, 1538
MaeII	ACGT	5 cut(s)	122, 219, 957, 979, 1207
MaeIII	GTNAC	5 cut(s)	185, 316, 392, 1476, 1576
MalI	GATC	3 cut(s)	1433, 1629, 1709
MboI	GATC	3 cut(s)	1431, 1627, 1707
MfeI	CAATTG	3 cut(s)	486, 1245, 1560
MhlI	GDGCHC	2 cut(s)	336, 1471
MlsI	TGGCCA	1 cut(s)	1000
MluNI	TGGCCA	1 cut(s)	1000
Mly113I	GGCGCC	1 cut(s)	174
MmeI	TCCRAC	2 cut(s)	672, 1574
Mox20I	TGGCCA	1 cut(s)	1000
Mph1103I	ATGCAT	1 cut(s)	169
MroI	TCCGGA	1 cut(s)	715
MscI	TGGCCA	1 cut(s)	1000
MseI	TTAA	9 cut(s)	38, 564, 744, 765, 1260, 1281, 1485, 1589, 1816
MslI	CAYNNNNRTG	2 cut(s)	162, 937
Msp20I	TGGCCA	1 cut(s)	1000
MspA1I	CMGCKG	4 cut(s)	17, 211, 353, 362
MspCI	CTTAAG	2 cut(s)	1280, 1588
MspI	CCGG	4 cut(s)	171, 177, 321, 716
MspR9I	CCNGG	1 cut(s)	1648
MunI	CAATTG	3 cut(s)	486, 1245, 1560
MvaI	CCWGG	1 cut(s)	1648
MvnI	CGCG	2 cut(s)	138, 1517
NarI	GGCGCC	1 cut(s)	174
NcoI	CCATGG	1 cut(s)	1472
NdeII	GATC	3 cut(s)	1431, 1627, 1707
NlaIII	CATG	8 cut(s)	482, 636, 989, 1015, 1055, 1459, 1476, 1693
NlaIV	GGNNCC	1 cut(s)	175
NmeAIII	GCCGAG	1 cut(s)	1608
NmuCI	GTSAC	5 cut(s)	185, 316, 392, 1476, 1576
NsiI	ATGCAT	1 cut(s)	169
PaeR7I	CTCGAG	1 cut(s)	795
PfeI	GAWTC	2 cut(s)	1056, 1313
PflFI	GACNNNGTC	1 cut(s)	1026
PluTI	GGCGCC	1 cut(s)	177
PmaCI	CACGTG	1 cut(s)	958
PmlI	CACGTG	1 cut(s)	958
Ppu21I	YACGTR	3 cut(s)	123, 220, 958
PpuMI	RGGWCCY	1 cut(s)	1522
Psp1406I	AACGTT	1 cut(s)	1207
Psp5II	RGGWCCY	1 cut(s)	1522
Psp6I	CCWGG	1 cut(s)	1646
PspCI	CACGTG	1 cut(s)	958
PspFI	CCCAGC	1 cut(s)	379
PspGI	CCWGG	1 cut(s)	1646
PspN4I	GGNNCC	1 cut(s)	175
PspPI	GGNCC	1 cut(s)	1522
PspPPI	RGGWCCY	1 cut(s)	1522
PsrI	GAACNNNNNNTAC	4 cut(s)	103, 135, 437, 469
PsyI	GACNNNGTC	1 cut(s)	1026
RsaI	GTAC	3 cut(s)	726, 1154, 1267
RsaNI	GTAC	3 cut(s)	725, 1153, 1266
RseI	CAYNNNNRTG	2 cut(s)	162, 937
SaqAI	TTAA	9 cut(s)	38, 564, 744, 765, 1260, 1281, 1485, 1589, 1816
Sau3AI	GATC	3 cut(s)	1431, 1627, 1707
Sau96I	GGNCC	1 cut(s)	1522
ScrFI	CCNGG	1 cut(s)	1648
SduI	GDGCHC	2 cut(s)	336, 1471
SfaNI	GCATC	7 cut(s)	154, 176, 628, 825, 853, 1132, 1627
SfoI	GGCGCC	1 cut(s)	175
Sfr274I	CTCGAG	1 cut(s)	795
SgrAI	CRCCGGYG	1 cut(s)	176
SinI	GGWCC	1 cut(s)	1522
SlaI	CTCGAG	1 cut(s)	795
SmiMI	CAYNNNNRTG	2 cut(s)	162, 937
SmlI	CTYRAG	4 cut(s)	599, 795, 1280, 1588
SmoI	CTYRAG	4 cut(s)	599, 795, 1280, 1588
SnaBI	TACGTA	1 cut(s)	123
SspDI	GGCGCC	1 cut(s)	173
SspI	AATATT	1 cut(s)	1219
SspMI	CTAG	4 cut(s)	1025, 1094, 1427, 1538
StyD4I	CCNGG	1 cut(s)	1646
StyI	CCWWGG	1 cut(s)	1472
TaaI	ACNGT	8 cut(s)	338, 392, 432, 560, 569, 611, 1265, 1354
TaiI	ACGT	5 cut(s)	125, 222, 960, 982, 1210
TaqI	TCGA	2 cut(s)	796, 1635
TatI	WGTACW	1 cut(s)	724
TauI	GCSGC	9 cut(s)	8, 11, 14, 20, 266, 353, 359, 362, 1517
TfiI	GAWTC	2 cut(s)	1056, 1313
Tru1I	TTAA	9 cut(s)	38, 564, 744, 765, 1260, 1281, 1485, 1589, 1816
Tru9I	TTAA	9 cut(s)	38, 564, 744, 765, 1260, 1281, 1485, 1589, 1816
TscAI	CASTG	4 cut(s)	190, 331, 395, 1359
TseFI	GTSAC	5 cut(s)	185, 316, 392, 1476, 1576
Tsp45I	GTSAC	5 cut(s)	185, 316, 392, 1476, 1576
TspDTI	ATGAA	5 cut(s)	445, 1091, 1201, 1373, 1395
TspGWI	ACGGA	3 cut(s)	728, 1404, 1748
TspRI	CASTG	4 cut(s)	190, 331, 395, 1359
Tth111I	GACNNNGTC	1 cut(s)	1026
Vha464I	CTTAAG	2 cut(s)	1280, 1588
VneI	GTGCAC	1 cut(s)	1467
VpaK11BI	GGWCC	1 cut(s)	1522
XagI	CCTNNNNNAGG	1 cut(s)	1166
XapI	RAATTY	5 cut(s)	497, 719, 1130, 1240, 1447
XhoI	CTCGAG	1 cut(s)	795
XspI	CTAG	4 cut(s)	1025, 1094, 1427, 1538
Zsp2I	ATGCAT	1 cut(s)	169

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.