Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr1

Orthogroup ID

OG0004907

Physical Location & Seq

Genomic Coordinates Forward (+)

15443330 .. 15446661

Gene Structure 3332 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2034 bp

ATGGGGTTGAAGAAGAGGCTAGATTTTGGATTTAATGGCTTCCAGGTCCCTAATATACCTAGAGCTCCCATCGATCAGCTAGGGGGCCCACATAGGAAGTCCGTCGAGGATGGCCAAATCAGTGCATTTGAATTATTGGCTTCTTTAGCTGGCAAGTTGTTGCAGGAGAGTGAAAGTTCTGCCTCCAGTAATGCTTCTGAAGGAAATTTGCAGCCTGCCTTTGGCATAGATGTTAAGCAGGAAAGACAAGATGAACATAAACCTCTGAAAGAAGAGTGCCTTGATCAGGGAAGCTCTGAAGAAAGTGTTTCTTTAGGGCTGACATCCCAAAACATCAATCGGAAGGGTATTATAAAAGAATTTCCGCATGCCGACAGTGATACTGTTTTGGAACGCACTTCAGTTATTACAAGTTCTGACAGCTCTGCAAAAGCTGGGCGTCATGCTAAGTCTGTAATTTGCAGTAGCAGGCCCACATTTCAGAAATATTCTGGTAAGGTAGAGGGAGACTCCCCGGGTATTGTGGAGTCCTGTTATGGTAATGTAGCAACTGGAATTGAAGTACAGGGAGATAGTAAGCCGTTAGAAACTGGATCTTTAAAGATAGCTAACCCATGCAGTTCAAAGGATCCAACCAAACTGCATGCAAACTATCCTGCAATGCTCAATGGAGACAGCAATGTCAAATTGTCATTGTTCAGGGATCCTATTCCTAATGCTTCTTTTTCCAGGCATAGGAATGATATTGAATTAGGTAGTAGAGATGATGACGAAAACTTTTCTAGGTGCATTAAACCTAGCAATAGGGTGAAGGTCTTTAGGCCTCCGCCACGTGTTGGAGGCCAAAAAATAAGGAAGTTACTGACATCCAAGTACTGGAAAGCGACTCCAAAGTTGAGGGAATTTGAACACTATAGATATGATGGGGGAGTAAAACCTATTTATCACAAAAGGAAAACCTTTTACAACCGTGAAAGATCTCAACGTGACACTCTTTATAAGAGGAGGAAACTAGTTGACCGGAGTTCGGTAGTGACTTCTGATGGAGGGTTTAGTGGTGAAAGTGTTTCTAATTCACCTGATAACGGAGATAAAACTGGTCCAGCTGCAAACGGAATATCAGCTGCAGTTATTGGTCATCAAGCATCTTTTCGCTCTGAGGAATCTCAAGTGAAATTGAGAATCAAATCCTTTAGGGTGCCAGAGCTAGTCATTGAGGTCCCAGAAACTGAAACTGTCGGTTCATTGAAGAGGACAGTCATGGATGCAGTGAATGCCATACTTAGGGATGGATTAGGTGTTGGAGTACTTGTTCAAGGGAAAAAGATAACAGATGACTACAGAACTCTAATGCAGATGGGAATTTCTTCCAAAGACAGTTTGGATTCTCTGGATTTTATGTTGGAGCCTAGTCCCATGCAAGCCCTTCCATCTTTGTGTTTTGGCGACCCTCCTTCACTATCATGCGAGACAGTACTTGTGACCAGGTCCCCAGGCACACCTGTTTTGGACTCTACGATGTCCGATGTGTTATCTGTCCTTCCTCCTATAACCAATTCAGGCTGTGTTGCTGAAACTAAGCATGAACCAGTTTCATCCCATATTGACATATTGACCGACAAAACAATGCTGGAATCCCAGGCGCTAGTTGCTATTCCAGAAATGAGCATGGAGCCACTAGCCGTAGTTCCTGTGAGCCAGAAAACTAAGCGATCAGAGCTTGCACAGCGGCGAACCAGGAGACCATTCTCTGTCTCAGAAGTTGAAGCATTGGTGACCGCAGTTGAGGAACTTGGCACTGGAAGGTGGCGCGATGTTAAATTGCGTGCATTTGAGAGTGCAGATCATCGAACTTACGTGGACTTGAAGGATAAATGGAAAACCTTAGTCCACACGGCGAAAATCTCTCCTCAGCAAAGAAGGGGAGAGCCAGTCCCGCAGGAGCTTTTGGACCGAGTGTTGGCTGCCCATTCTTACTGGTGCCAACACCAAGCTAAGCAACACGGCAAGCACCCAGCCTTGCCGGCATTCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000228 GO:0000723 GO:0000781 GO:0000782 GO:0000783 GO:0000784 GO:0001101 GO:0003674 GO:0003676 GO:0003677 GO:0003690 GO:0003691 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0006139 GO:0006259 GO:0006725 GO:0006807 GO:0006996 GO:0008150 GO:0008152 GO:0008301 GO:0009719 GO:0009725 GO:0009737 GO:0009987 GO:0010033 GO:0016043 GO:0031627 GO:0031974 GO:0031981 GO:0032200 GO:0032991 GO:0032993 GO:0033993 GO:0034641 GO:0042162 GO:0042221 GO:0042592 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043565 GO:0044237 GO:0044238 GO:0044260 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044454 GO:0044464 GO:0046483 GO:0050896 GO:0051276 GO:0060249 GO:0065007 GO:0065008 GO:0070013 GO:0071704 GO:0071840 GO:0090304 GO:0097159 GO:0097305 GO:0098687 GO:1901360 GO:1901363 GO:1901700

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

678

Amino Acids

74.53

Weight (kDa)

8.8

Isoelectric Point (pI)

51.95

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Ubiquitin_TPR1	PF23603	390 - 457	1.3e-34	Telomere repeat-binding protein 1-like, ubiquitin-like domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004907)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G12560 AT3G12560 AT5G13820 AT5G13820
fragaria_vesca	FvH4_7g22710 FvH4_7g22710 FvH4_7g22710 FvH4_7g22710 FvH4_7g22710 FvH4_7g22710 FvH4_7g22710 FvH4_7g22710
malus_domestica	MD01G1135700.v1.1 MD07G1200400.v1.1
prunus_persica	Prupe.2G237100_v2.0.a1
pyrus_communis	pycom01g15650 pycom07g18730 pycom07g18740
rosa_chinensis	RchiOBHm_Chr1g0367801
rosa_laevigata	RLG00000027262
rosa_multiflora	Rmu_co8480775.1_g000001 Rmu_ssc0000395.1_g000024
rosa_roxburghii	Rroxscaffold_4G00289210
rosa_rugosa	Rorug01G0336700 Rorug01G0336800
rosa_samantha	Rh1AG343900 Rh1BG305800 Rh1CG321400 Rh1DG338000
rosa_wichuraiana	Rw1G030610

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	353, 999
AasI	GACNNNNNNGTC	1 cut(s)	680
AccB1I	GGYRCC	2 cut(s)	1198, 1980
AccB7I	CCANNNNNTGG	2 cut(s)	836, 876
AccII	CGCG	1 cut(s)	1812
AciI	CCGC	5 cut(s)	365, 827, 1729, 1779, 1937
AclWI	GGATC	5 cut(s)	601, 623, 636, 698, 711
AcoI	YGGCCR	1 cut(s)	112
AcsI	RAATTY	4 cut(s)	205, 359, 902, 1362
AcuI	CTGAAG	3 cut(s)	219, 318, 384
AcvI	CACGTG	1 cut(s)	833
AcyI	GRCGYC	1 cut(s)	439
AfaI	GTAC	4 cut(s)	564, 875, 1308, 1476
AfiI	CCNNNNNNNGG	9 cut(s)	221, 286, 735, 836, 876, 1027, 1085, 1284, 1960
AflIII	ACRYGT	1 cut(s)	832
AhlI	ACTAGT	1 cut(s)	1012
AjnI	CCWGG	6 cut(s)	42, 728, 1484, 1492, 1638, 1736
AloI	GAACNNNNNNTCC	2 cut(s)	1296, 1328
Alw21I	GWGCWC	1 cut(s)	67
Alw26I	GTCTC	5 cut(s)	501, 666, 1463, 1735, 1759
AlwI	GGATC	5 cut(s)	601, 623, 636, 698, 711
AlwNI	CAGNNNCTG	1 cut(s)	1229
Ama87I	CYCGRG	1 cut(s)	514
AoxI	GGCC	5 cut(s)	85, 112, 470, 821, 841
ApaI	GGGCCC	1 cut(s)	89
ApeKI	GCWGC	4 cut(s)	211, 1106, 1124, 1964
ApoI	RAATTY	4 cut(s)	205, 359, 902, 1362
Asp700I	GAANNNNTTC	1 cut(s)	1366
AspLEI	GCGC	2 cut(s)	1645, 1812
AspS9I	GGNCC	8 cut(s)	46, 85, 86, 471, 1100, 1219, 1488, 1951
AsuC2I	CCSGG	2 cut(s)	515, 516
AsuHPI	GGTGA	4 cut(s)	820, 1068, 1070, 1786
AvaI	CYCGRG	1 cut(s)	514
AvaII	GGWCC	5 cut(s)	46, 1100, 1219, 1488, 1951
BaeGI	GKGCMC	1 cut(s)	89
BalI	TGGCCA	1 cut(s)	114
BamHI	GGATCC	2 cut(s)	628, 703
BanI	GGYRCC	2 cut(s)	1198, 1980
BanII	GRGCYC	2 cut(s)	67, 89
BbrPI	CACGTG	1 cut(s)	833
Bbv12I	GWGCWC	1 cut(s)	67
BbvCI	CCTCAGC	1 cut(s)	1911
BbvI	GCAGC	4 cut(s)	223, 1093, 1111, 1951
BccI	CCATC	7 cut(s)	77, 104, 917, 1037, 1283, 1351, 1438
BceAI	ACGGC	4 cut(s)	565, 1667, 1911, 2020
BciT130I	CCWGG	6 cut(s)	44, 730, 1486, 1494, 1640, 1738
BclI	TGATCA	1 cut(s)	283
BcnI	CCSGG	2 cut(s)	515, 516
BcoDI	GTCTC	5 cut(s)	501, 666, 1463, 1735, 1759
BcuI	ACTAGT	1 cut(s)	1012
BfmI	CTRYAG	3 cut(s)	913, 1125, 1339
BfoI	RGCGCY	1 cut(s)	1646
BglI	GCCNNNNNGGC	1 cut(s)	2024
BglII	AGATCT	1 cut(s)	977
BisI	GCNGC	5 cut(s)	212, 1107, 1125, 1730, 1965
BlpI	GCTNAGC	1 cut(s)	1995
BlsI	GCNGC	5 cut(s)	213, 1108, 1126, 1731, 1966
BmcAI	AGTACT	3 cut(s)	875, 1308, 1476
Bme1390I	CCNGG	8 cut(s)	44, 515, 516, 730, 1486, 1494, 1640, 1738
Bme18I	GGWCC	5 cut(s)	46, 1100, 1219, 1488, 1951
BmeT110I	CYCGRG	1 cut(s)	514
BmgT120I	GGNCC	8 cut(s)	46, 85, 86, 471, 1100, 1219, 1488, 1951
BmrFI	CCNGG	8 cut(s)	44, 515, 516, 730, 1486, 1494, 1640, 1738
BmsI	GCATC	2 cut(s)	1154, 1255
BplI	GAGNNNNNCTC	2 cut(s)	494, 526
BpmI	CTGGAG	1 cut(s)	169
Bpu10I	CCTNAGC	1 cut(s)	1911
Bpu1102I	GCTNAGC	1 cut(s)	1995
BpuEI	CTTGAG	1 cut(s)	1152
BpuMI	CCSGG	2 cut(s)	515, 516
Bsa29I	ATCGAT	1 cut(s)	72
BsaAI	YACGTR	2 cut(s)	833, 1858
BsaHI	GRCGYC	1 cut(s)	439
BsaI	GGTCTC	1 cut(s)	1735
BsaJI	CCNNGG	4 cut(s)	513, 514, 1492, 1638
BsaWI	WCCGGW	1 cut(s)	1020
BsaXI	ACNNNNNCTCC	4 cut(s)	1296, 1326, 1917, 1947
Bsc4I	CCNNNNNNNGG	9 cut(s)	221, 286, 735, 836, 876, 1027, 1085, 1284, 1960
Bse118I	RCCGGY	1 cut(s)	2023
Bse1I	ACTGG	9 cut(s)	186, 556, 595, 881, 1102, 1589, 1804, 1931, 1982
Bse3DI	GCAATG	2 cut(s)	666, 685
BseBI	CCWGG	6 cut(s)	44, 730, 1486, 1494, 1640, 1738
BseCI	ATCGAT	1 cut(s)	72
BseDI	CCNNGG	4 cut(s)	513, 514, 1492, 1638
BseGI	GGATG	6 cut(s)	115, 323, 866, 1270, 1294, 1595
BseLI	CCNNNNNNNGG	9 cut(s)	221, 286, 735, 836, 876, 1027, 1085, 1284, 1960
BseMI	GCAATG	2 cut(s)	666, 685
BseMII	CTCAG	3 cut(s)	1149, 1770, 1925
BseNI	ACTGG	9 cut(s)	186, 556, 595, 881, 1102, 1589, 1804, 1931, 1982
BseRI	GAGGAG	2 cut(s)	1018, 1899
BseSI	GKGCMC	1 cut(s)	89
BseXI	GCAGC	4 cut(s)	223, 1093, 1111, 1951
BseYI	CCCAGC	2 cut(s)	434, 2014
BsgI	GTGCAG	1 cut(s)	1860
Bsh1236I	CGCG	1 cut(s)	1812
BshFI	GGCC	5 cut(s)	87, 114, 472, 823, 843
BshNI	GGYRCC	2 cut(s)	1198, 1980
BshVI	ATCGAT	1 cut(s)	72
BsiHKAI	GWGCWC	1 cut(s)	67
BsiHKCI	CYCGRG	1 cut(s)	514
BsiSI	CCGG	3 cut(s)	515, 1021, 2024
BslFI	GGGAC	5 cut(s)	32, 1205, 1398, 1474, 1919
BslI	CCNNNNNNNGG	9 cut(s)	221, 286, 735, 836, 876, 1027, 1085, 1284, 1960
BsmAI	GTCTC	5 cut(s)	501, 666, 1463, 1735, 1759
BsmFI	GGGAC	5 cut(s)	32, 1205, 1398, 1474, 1919
BsmI	GAATGC	2 cut(s)	1279, 2027
BsnI	GGCC	5 cut(s)	87, 114, 472, 823, 843
Bso31I	GGTCTC	1 cut(s)	1735
BsoBI	CYCGRG	1 cut(s)	514
Bsp120I	GGGCCC	1 cut(s)	85
Bsp1286I	GDGCHC	2 cut(s)	67, 89
Bsp143I	GATC	8 cut(s)	73, 283, 593, 628, 703, 977, 1712, 1843
Bsp1720I	GCTNAGC	1 cut(s)	1995
BspACI	CCGC	5 cut(s)	365, 827, 1729, 1779, 1937
BspANI	GGCC	5 cut(s)	87, 114, 472, 823, 843
BspCNI	CTCAG	3 cut(s)	1150, 1769, 1924
BspDI	ATCGAT	1 cut(s)	72
BspFNI	CGCG	1 cut(s)	1812
BspMAI	CTGCAG	1 cut(s)	1129
BspPI	GGATC	5 cut(s)	601, 623, 636, 698, 711
BspT107I	GGYRCC	2 cut(s)	1198, 1980
BspTNI	GGTCTC	1 cut(s)	1735
BsrDI	GCAATG	2 cut(s)	666, 685
BsrFI	RCCGGY	1 cut(s)	2023
BsrI	ACTGG	9 cut(s)	186, 556, 595, 881, 1102, 1589, 1804, 1931, 1982
BssAI	RCCGGY	1 cut(s)	2023
BssECI	CCNNGG	4 cut(s)	513, 514, 1492, 1638
BssMI	GATC	8 cut(s)	73, 283, 593, 628, 703, 977, 1712, 1843
BssNI	GRCGYC	1 cut(s)	439
Bst2UI	CCWGG	6 cut(s)	44, 730, 1486, 1494, 1640, 1738
Bst4CI	ACNGT	7 cut(s)	377, 385, 971, 1237, 1258, 1379, 1474
Bst6I	CTCTTC	3 cut(s)	8, 267, 1244
BstACI	GRCGYC	1 cut(s)	439
BstAPI	GCANNNNNTGC	1 cut(s)	1274
BstBAI	YACGTR	2 cut(s)	833, 1858
BstDEI	CTNAG	9 cut(s)	447, 1158, 1283, 1578, 1707, 1756, 1885, 1911, 1995
BstEII	GGTNACC	1 cut(s)	1774
BstENI	CCTNNNNNAGG	1 cut(s)	284
BstF5I	GGATG	6 cut(s)	115, 323, 866, 1270, 1294, 1595
BstFNI	CGCG	1 cut(s)	1812
BstH2I	RGCGCY	1 cut(s)	1646
BstHHI	GCGC	2 cut(s)	1645, 1812
BstKTI	GATC	8 cut(s)	76, 286, 596, 631, 706, 980, 1715, 1846
BstMAI	GTCTC	5 cut(s)	501, 666, 1463, 1735, 1759
BstMBI	GATC	8 cut(s)	73, 283, 593, 628, 703, 977, 1712, 1843
BstMWI	GCNNNNNNNGC	7 cut(s)	146, 1274, 1649, 1717, 1726, 1936, 2024
BstNI	CCWGG	6 cut(s)	44, 730, 1486, 1494, 1640, 1738
BstNSI	RCATGY	2 cut(s)	371, 647
BstPI	GGTNACC	1 cut(s)	1774
BstSCI	CCNGG	8 cut(s)	42, 513, 514, 728, 1484, 1492, 1638, 1736
BstSFI	CTRYAG	3 cut(s)	913, 1125, 1339
BstSLI	GKGCMC	1 cut(s)	89
BstUI	CGCG	1 cut(s)	1812
BstV1I	GCAGC	4 cut(s)	223, 1093, 1111, 1951
BstX2I	RGATCY	4 cut(s)	593, 628, 703, 977
BstYI	RGATCY	4 cut(s)	593, 628, 703, 977
Bsu15I	ATCGAT	1 cut(s)	72
BsuRI	GGCC	5 cut(s)	87, 114, 472, 823, 843
BsuTUI	ATCGAT	1 cut(s)	72
BtgZI	GCGATG	1 cut(s)	1827
BtsCI	GGATG	6 cut(s)	115, 323, 866, 1270, 1294, 1595
BtsI	GCAGTG	1 cut(s)	1275
BtsIMutI	CAGTG	4 cut(s)	127, 382, 1275, 1797
CaiI	CAGNNNCTG	1 cut(s)	1229
CfoI	GCGC	2 cut(s)	1645, 1812
Cfr10I	RCCGGY	1 cut(s)	2023
Cfr13I	GGNCC	8 cut(s)	46, 85, 86, 471, 1100, 1219, 1488, 1951
Cfr9I	CCCGGG	1 cut(s)	514
ClaI	ATCGAT	1 cut(s)	72
CseI	GACGC	1 cut(s)	428
CsiI	ACCWGGT	1 cut(s)	1484
Csp6I	GTAC	4 cut(s)	563, 874, 1307, 1475
CviAII	CATG	9 cut(s)	368, 443, 615, 644, 1261, 1417, 1464, 1583, 1669
CviQI	GTAC	4 cut(s)	563, 874, 1307, 1475
DdeI	CTNAG	9 cut(s)	447, 1158, 1283, 1578, 1707, 1756, 1885, 1911, 1995
DpnI	GATC	8 cut(s)	75, 285, 595, 630, 705, 979, 1714, 1845
DpnII	GATC	8 cut(s)	73, 283, 593, 628, 703, 977, 1712, 1843
DraI	TTTAAA	1 cut(s)	600
DrdI	GACNNNNNNGTC	1 cut(s)	680
DseDI	GACNNNNNNGTC	1 cut(s)	680
EaeI	YGGCCR	1 cut(s)	112
Eam1104I	CTCTTC	3 cut(s)	8, 267, 1244
EarI	CTCTTC	3 cut(s)	8, 267, 1244
EciI	GGCGGA	1 cut(s)	816
Ecl136II	GAGCTC	1 cut(s)	65
Eco147I	AGGCCT	1 cut(s)	823
Eco24I	GRGCYC	2 cut(s)	67, 89
Eco31I	GGTCTC	1 cut(s)	1735
Eco47I	GGWCC	5 cut(s)	46, 1100, 1219, 1488, 1951
Eco53kI	GAGCTC	1 cut(s)	65
Eco57I	CTGAAG	3 cut(s)	219, 318, 384
Eco72I	CACGTG	1 cut(s)	833
Eco88I	CYCGRG	1 cut(s)	514
Eco91I	GGTNACC	1 cut(s)	1774
EcoICRI	GAGCTC	1 cut(s)	65
EcoNI	CCTNNNNNAGG	1 cut(s)	284
EcoO109I	RGGNCCY	4 cut(s)	46, 85, 1219, 1488
EcoO65I	GGTNACC	1 cut(s)	1774
EcoRII	CCWGG	6 cut(s)	42, 728, 1484, 1492, 1638, 1736
EcoT38I	GRGCYC	2 cut(s)	67, 89
FaeI	CATG	9 cut(s)	371, 446, 618, 647, 1264, 1420, 1467, 1586, 1672
FalI	AAGNNNNNCTT	4 cut(s)	264, 296, 295, 327
FaqI	GGGAC	5 cut(s)	32, 1205, 1398, 1474, 1919
FatI	CATG	9 cut(s)	367, 442, 614, 643, 1260, 1416, 1463, 1582, 1668
FauI	CCCGC	1 cut(s)	1944
FbaI	TGATCA	1 cut(s)	283
Fnu4HI	GCNGC	5 cut(s)	212, 1107, 1125, 1730, 1965
FokI	GGATG	6 cut(s)	122, 310, 853, 1277, 1301, 1582
FriOI	GRGCYC	2 cut(s)	67, 89
Fsp4HI	GCNGC	5 cut(s)	212, 1107, 1125, 1730, 1965
GlaI	GCGC	2 cut(s)	1644, 1811
GluI	GCNGC	5 cut(s)	212, 1107, 1125, 1730, 1965
GsaI	CCCAGC	2 cut(s)	438, 2018
GsuI	CTGGAG	1 cut(s)	169
HaeII	RGCGCY	1 cut(s)	1646
HaeIII	GGCC	5 cut(s)	87, 114, 472, 823, 843
HapII	CCGG	3 cut(s)	515, 1021, 2024
HgaI	GACGC	1 cut(s)	428
HhaI	GCGC	2 cut(s)	1645, 1812
Hin1I	GRCGYC	1 cut(s)	439
Hin1II	CATG	9 cut(s)	371, 446, 618, 647, 1264, 1420, 1467, 1586, 1672
Hin6I	GCGC	2 cut(s)	1643, 1810
HinP1I	GCGC	2 cut(s)	1643, 1810
HincII	GTYRAC	1 cut(s)	1018
HindII	GTYRAC	1 cut(s)	1018
HinfI	GANTC	8 cut(s)	509, 527, 886, 1163, 1182, 1385, 1511, 1634
HpaII	CCGG	3 cut(s)	515, 1021, 2024
HphI	GGTGA	4 cut(s)	820, 1068, 1070, 1786
Hpy166II	GTNNAC	3 cut(s)	1018, 1861, 1891
Hpy188III	TCNNGA	2 cut(s)	1391, 1658
Hpy8I	GTNNAC	3 cut(s)	1018, 1861, 1891
Hpy99I	CGWCG	1 cut(s)	107
HpyAV	CCTTC	9 cut(s)	194, 337, 805, 1436, 1464, 1550, 1797, 1861, 1914
HpyCH4III	ACNGT	7 cut(s)	377, 385, 971, 1237, 1258, 1379, 1474
HpyCH4IV	ACGT	3 cut(s)	832, 985, 1857
HpyF10VI	GCNNNNNNNGC	7 cut(s)	146, 1274, 1649, 1717, 1726, 1936, 2024
HpyF3I	CTNAG	9 cut(s)	447, 1158, 1283, 1578, 1707, 1756, 1885, 1911, 1995
HpySE526I	ACGT	3 cut(s)	832, 985, 1857
Hsp92I	GRCGYC	1 cut(s)	439
Hsp92II	CATG	9 cut(s)	371, 446, 618, 647, 1264, 1420, 1467, 1586, 1672
HspAI	GCGC	2 cut(s)	1643, 1810
KroI	GCCGGC	1 cut(s)	2023
KroNI	GCCGGC	1 cut(s)	2025
Ksp22I	TGATCA	1 cut(s)	283
Kzo9I	GATC	8 cut(s)	73, 283, 593, 628, 703, 977, 1712, 1843
LmnI	GCTCC	4 cut(s)	70, 1405, 1672, 1942
Lsp1109I	GCAGC	4 cut(s)	223, 1093, 1111, 1951
LweI	GCATC	2 cut(s)	1154, 1255
MabI	ACCWGGT	1 cut(s)	1484
MaeII	ACGT	3 cut(s)	832, 985, 1857
MaeIII	GTNAC	5 cut(s)	858, 986, 1033, 1480, 1774
MalI	GATC	8 cut(s)	75, 285, 595, 630, 705, 979, 1714, 1845
MboI	GATC	8 cut(s)	73, 283, 593, 628, 703, 977, 1712, 1843
MboII	GAAGA	6 cut(s)	22, 25, 284, 311, 1261, 1359
MflI	RGATCY	4 cut(s)	593, 628, 703, 977
MhlI	GDGCHC	2 cut(s)	67, 89
MlsI	TGGCCA	1 cut(s)	114
MluNI	TGGCCA	1 cut(s)	114
MlyI	GAGTC	4 cut(s)	503, 536, 880, 1505
MmeI	TCCRAC	4 cut(s)	656, 817, 1282, 1383
Mox20I	TGGCCA	1 cut(s)	114
MroNI	GCCGGC	1 cut(s)	2023
MroXI	GAANNNNTTC	1 cut(s)	1366
MscI	TGGCCA	1 cut(s)	114
MseI	TTAA	5 cut(s)	33, 234, 599, 792, 1818
MslI	CAYNNNNRTG	3 cut(s)	738, 1435, 1462
Msp20I	TGGCCA	1 cut(s)	114
MspA1I	CMGCKG	3 cut(s)	1106, 1124, 1729
MspI	CCGG	3 cut(s)	515, 1021, 2024
MspR9I	CCNGG	8 cut(s)	44, 515, 516, 730, 1486, 1494, 1640, 1738
Mva1269I	GAATGC	2 cut(s)	1279, 2027
MvaI	CCWGG	6 cut(s)	44, 730, 1486, 1494, 1640, 1738
MvnI	CGCG	1 cut(s)	1812
MwoI	GCNNNNNNNGC	7 cut(s)	146, 1274, 1649, 1717, 1726, 1936, 2024
NaeI	GCCGGC	1 cut(s)	2025
NciI	CCSGG	2 cut(s)	515, 516
NdeII	GATC	8 cut(s)	73, 283, 593, 628, 703, 977, 1712, 1843
NgoMIV	GCCGGC	1 cut(s)	2023
NlaIII	CATG	9 cut(s)	371, 446, 618, 647, 1264, 1420, 1467, 1586, 1672
NmuCI	GTSAC	4 cut(s)	986, 1033, 1480, 1774
NspI	RCATGY	2 cut(s)	371, 647
PaeI	GCATGC	2 cut(s)	371, 647
PceI	AGGCCT	1 cut(s)	823
PctI	GAATGC	2 cut(s)	1279, 2027
PdiI	GCCGGC	1 cut(s)	2025
PdmI	GAANNNNTTC	1 cut(s)	1366
PfeI	GAWTC	4 cut(s)	1163, 1182, 1385, 1634
PflFI	GACNNNGTC	1 cut(s)	1486
PflMI	CCANNNNNTGG	2 cut(s)	836, 876
PkrI	GCNGC	5 cut(s)	213, 1108, 1126, 1731, 1966
PleI	GAGTC	4 cut(s)	503, 535, 880, 1505
PmaCI	CACGTG	1 cut(s)	833
PmlI	CACGTG	1 cut(s)	833
PpsI	GAGTC	4 cut(s)	503, 535, 880, 1505
Ppu21I	YACGTR	2 cut(s)	833, 1858
PpuMI	RGGWCCY	3 cut(s)	46, 1219, 1488
PsiI	TTATAA	2 cut(s)	353, 999
Psp124BI	GAGCTC	1 cut(s)	67
Psp5II	RGGWCCY	3 cut(s)	46, 1219, 1488
Psp6I	CCWGG	6 cut(s)	42, 728, 1484, 1492, 1638, 1736
PspCI	CACGTG	1 cut(s)	833
PspEI	GGTNACC	1 cut(s)	1774
PspFI	CCCAGC	2 cut(s)	434, 2014
PspGI	CCWGG	6 cut(s)	42, 728, 1484, 1492, 1638, 1736
PspOMI	GGGCCC	1 cut(s)	85
PspPI	GGNCC	8 cut(s)	46, 85, 86, 471, 1100, 1219, 1488, 1951
PspPPI	RGGWCCY	3 cut(s)	46, 1219, 1488
PstI	CTGCAG	1 cut(s)	1129
PstNI	CAGNNNCTG	1 cut(s)	1229
PsuI	RGATCY	4 cut(s)	593, 628, 703, 977
PsyI	GACNNNGTC	1 cut(s)	1486
PvuII	CAGCTG	2 cut(s)	1106, 1124
RsaI	GTAC	4 cut(s)	564, 875, 1308, 1476
RsaNI	GTAC	4 cut(s)	563, 874, 1307, 1475
RseI	CAYNNNNRTG	3 cut(s)	738, 1435, 1462
SacI	GAGCTC	1 cut(s)	67
SaqAI	TTAA	5 cut(s)	33, 234, 599, 792, 1818
SatI	GCNGC	5 cut(s)	212, 1107, 1125, 1730, 1965
Sau3AI	GATC	8 cut(s)	73, 283, 593, 628, 703, 977, 1712, 1843
Sau96I	GGNCC	8 cut(s)	46, 85, 86, 471, 1100, 1219, 1488, 1951
ScaI	AGTACT	3 cut(s)	875, 1308, 1476
SchI	GAGTC	4 cut(s)	503, 536, 880, 1505
ScrFI	CCNGG	8 cut(s)	44, 515, 516, 730, 1486, 1494, 1640, 1738
SduI	GDGCHC	2 cut(s)	67, 89
SexAI	ACCWGGT	1 cut(s)	1484
SfaNI	GCATC	2 cut(s)	1154, 1255
SfcI	CTRYAG	3 cut(s)	913, 1125, 1339
SinI	GGWCC	5 cut(s)	46, 1100, 1219, 1488, 1951
SmaI	CCCGGG	1 cut(s)	516
SmiMI	CAYNNNNRTG	3 cut(s)	738, 1435, 1462
SmlI	CTYRAG	1 cut(s)	1167
SmoI	CTYRAG	1 cut(s)	1167
SpeI	ACTAGT	1 cut(s)	1012
SphI	GCATGC	2 cut(s)	371, 647
SseBI	AGGCCT	1 cut(s)	823
SsiI	CCGC	5 cut(s)	365, 827, 1729, 1779, 1937
SspI	AATATT	1 cut(s)	488
SstI	GAGCTC	1 cut(s)	67
StuI	AGGCCT	1 cut(s)	823
StyD4I	CCNGG	8 cut(s)	42, 513, 514, 728, 1484, 1492, 1638, 1736
TaaI	ACNGT	7 cut(s)	377, 385, 971, 1237, 1258, 1379, 1474
TaiI	ACGT	3 cut(s)	835, 988, 1860
TaqI	TCGA	3 cut(s)	72, 105, 1849
TaqII	GACCGA	2 cut(s)	1631, 1968
TatI	WGTACW	4 cut(s)	562, 873, 1306, 1474
TauI	GCSGC	1 cut(s)	1732
TfiI	GAWTC	4 cut(s)	1163, 1182, 1385, 1634
Tru1I	TTAA	5 cut(s)	33, 234, 599, 792, 1818
Tru9I	TTAA	5 cut(s)	33, 234, 599, 792, 1818
TscAI	CASTG	4 cut(s)	127, 382, 1275, 1804
TseFI	GTSAC	4 cut(s)	986, 1033, 1480, 1774
TseI	GCWGC	4 cut(s)	211, 1106, 1124, 1964
Tsp45I	GTSAC	4 cut(s)	986, 1033, 1480, 1774
TspDTI	ATGAA	4 cut(s)	267, 1233, 1584, 1599
TspGWI	ACGGA	3 cut(s)	91, 1101, 1128
TspMI	CCCGGG	1 cut(s)	514
TspRI	CASTG	4 cut(s)	127, 382, 1275, 1804
Tth111I	GACNNNGTC	1 cut(s)	1486
Van91I	CCANNNNNTGG	2 cut(s)	836, 876
VpaK11BI	GGWCC	5 cut(s)	46, 1100, 1219, 1488, 1951
XagI	CCTNNNNNAGG	1 cut(s)	284
XapI	RAATTY	4 cut(s)	205, 359, 902, 1362
XceI	RCATGY	2 cut(s)	371, 647
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1378
XmaI	CCCGGG	1 cut(s)	514
XmnI	GAANNNNTTC	1 cut(s)	1366
ZrmI	AGTACT	3 cut(s)	875, 1308, 1476

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.